Pregenerated sensors for LINC01521 (Homo sapiens)
Ensembl gene IDs: ENSG00000213888Ensembl transcript IDs: ENST00000504184.3, ENST00000614284.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCGGATCATCCGCCAGGGCAACGCCCGGAAGCCTCAGGGCGCGCGTaGCTGGGCGCGAGCTCGGCGCGCAGCGGTGGGAATCCCGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: SDHPPGQRPEASGRA*LGASSARSGGNPER Trigger: CCGCTCGGGATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGCCCTGAGGCTTCCGGGCGTTGCCCTGGCGGATGATCCGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 90 bp | GCCTCTTTGCAACTGTGGGAACTTCCCGCCCGCACACGCGGCGCCTaGAGCCTGGGGCTCCGCGCCAGGCGGCCCAAAGGCAGCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ASLQLWELPARTRGA*SLGLRARRPKGSRQ Trigger: CTGGCGGCTGCCTTTGGGCCGCCTGGCGCGGAGCCCCAGGCTGCAGGCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | ATCATCCGCCAGGGCAACGCCCGGAAGCCTCAGGGCGCGCGTGGCTaGGCGCGAGCTCGGCGCGCAGCGGTGGGAATCCCGAGCGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: IIRQGNARKPQGARG*ARARRAAVGIPSGV Trigger: AACTCCGCTCGGGATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGCCCTGAGGCTTCCGGGCGTTGCCCTGGCGGATGAT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | AGCCTCAGGGCGCGCGTGGCTGGGCGCGAGCTCGGCGCGCAGCGGTaGGAATCCCGAGCGGAGTTGGAAGCCGGGCCCGTTCATTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SLRARVAGRELGAQR*ESRAELEAGPVHLH Trigger: ATGCAAATGAACGGGCCCGGCTTCCAACTCCGCTCGGGATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGCCCTGAGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | CTCCGGAGGTTCGGCCTGTCTCCGGCCAGGACCCCGGGCCCTCTCTaGTGTTTGAAGCAGGGAGGCGGTCGCAGGCGACTTCTGGGAATT | + |
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Preference number: 5 (lower is better) Translates to: LRRFGLSPARTPGPL*CLKQGGGRRRLLGI Trigger: AATTCCCAGAAGTCGCCTGCGACCGCCTCCCTGCTTCAAACACCAGAGAGGGCCCGGGGTCCTGGCCGGAGACAGGCCGAACCTCCGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS TCA 90 bp | GGTTCGGCCTGTCTCCGGCCAGGACCCCGGGCCCTCTCTGGTGTTTaGAGCAGGGAGGCGGTCGCAGGCGACTTCTGGGAATTTCACGCA | + |
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Preference number: 5 (lower is better) Translates to: GSACLRPGPRALSGV*SREAVAGDFWEFHA Trigger: TGCGTGAAATTCCCAGAAGTCGCCTGCGACCGCCTCCCTGCTTCAAACACCAGAGAGGGCCCGGGGTCCTGGCCGGAGACAGGCCGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS GCA 90 bp | AGCTCTTCCGGGCGCGCAGCCCATCAGATCGATCAATGTACCGGGTaGAGAAGCAGCTCCGGAGGTTCGGCCTGTCTCCGGCCAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: SSSGRAAHQIDQCTG*RSSSGGSACLRPGP Trigger: GGGTCCTGGCCGGAGACAGGCCGAACCTCCGGAGCTGCTTCTGCACCCGGTACATTGATCGATCTGATGGGCTGCGCGCCCGGAAGAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CCA 90 bp | GGGACAAAGCTCGGCGTGCTGTGGTTTGGGGGAGAAGCTGGACGCTaGCTTCATCTCTCCAGCTCTTCCGGGCGCGCAGCCCATCAGATC | + |
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Preference number: 5 (lower is better) Translates to: GTKLGVLWFGGEAGR*LHLSSSSGRAAHQI Trigger: GATCTGATGGGCTGCGCGCCCGGAAGAGCTGGAGAGATGAAGCCAGCGTCCAGCTTCTCCCCCAAACCACAGCACGCCGAGCTTTGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CCA 90 bp | CCGTGGAAAGTTTGGAACACATACTTCGCTGCCTCTTTGCAACTGTaGGAACTTCCCGCCCGCACACGCGGCGCCTGCAGCCTGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PWKVWNTYFAASLQL*ELPARTRGACSLGL Trigger: GAGCCCCAGGCTGCAGGCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 90 bp | AGCGCTCAGTTTGGAACCGTGGAAAGTTTGGAACACATACTTCGCTaGCTCTTTGCAACTGTGGGAACTTCCCGCCCGCACACGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SAQFGTVESLEHILR*LFATVGTSRPHTRR Trigger: GCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 90 bp | TCTCCAACAGGAGTTTGGCATGTACTATGCCCTAGAGCGGAGGTGTaGAGGACAGGTGCTGCTGTCCCTGTGCACAGGTTAAGAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: SPTGVWHVLCPRAEV*RTGAAVPVHRLRNS Trigger: ACTGTTTCTTAACCTGTGCACAGGGACAGCAGCACCTGTCCTGCACACCTCCGCTCTAGGGCATAGTACATGCCAAACTCCTGTTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 90 bp | CATGCCTCTAATTCATTCTCTCCAACAGGAGTTTGGCATGTACTATaGCCTAGAGCGGAGGTGTGCAGGACAGGTGCTGCTGTCCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HASNSFSPTGVWHVL*PRAEVCRTGAAVPV Trigger: CACAGGGACAGCAGCACCTGTCCTGCACACCTCCGCTCTAGGGCATAGTACATGCCAAACTCCTGTTGGAGAGAATGAATTAGAGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | CCCCGCACACCGCTTCTCTTAATGGAAGCGCTCAGTTTGGAACCGTaGAAAGTTTGGAACACATACTTCGCTGCCTCTTTGCAACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRTPLLLMEALSLEP*KVWNTYFAASLQLW Trigger: CCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGGTGTGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | CCGCTTCTCTTAATGGAAGCGCTCAGTTTGGAACCGTGGAAAGTTTaGAACACATACTTCGCTGCCTCTTTGCAACTGTGGGAACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: PLLLMEALSLEPWKV*NTYFAASLQLWELP Trigger: GGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 90 bp | GGGAACTTTCTTCATGCCTCTAATTCATTCTCTCCAACAGGAGTTTaGCATGTACTATGCCCTAGAGCGGAGGTGTGCAGGACAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GNFLHASNSFSPTGV*HVLCPRAEVCRTGA Trigger: AGCACCTGTCCTGCACACCTCCGCTCTAGGGCATAGTACATGCCAAACTCCTGTTGGAGAGAATGAATTAGAGGCATGAAGAAAGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CAGGGCAACGCCCGGAAGCCTCAGGGCGCGCGTGGCTaGGCGCGAGCTCGGCGCGCAGCGGTGGGAATCCCG | + |
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Preference number: 6 (lower is better) Translates to: QGNARKPQGARG*ARARRAAVGIP Trigger: CGGGATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGCCCTGAGGCTTCCGGGCGTTGCCCTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CCGCCAGGGCAACGCCCGGAAGCCTCAGGGCGCGCGTaGCTGGGCGCGAGCTCGGCGCGCAGCGGTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PPGQRPEASGRA*LGASSARSGGN Trigger: ATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGCCCTGAGGCTTCCGGGCGTTGCCCTGGCGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | GCGCGCGTGGCTGGGCGCGAGCTCGGCGCGCAGCGGTaGGAATCCCGAGCGGAGTTGGAAGCCGGGCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: ARVAGRELGAQR*ESRAELEAGPV Trigger: AACGGGCCCGGCTTCCAACTCCGCTCGGGATTCCCACCGCTGCGCGCCGAGCTCGCGCCCAGCCACGCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 72 bp | CAACTGTGGGAACTTCCCGCCCGCACACGCGGCGCCTaGAGCCTGGGGCTCCGCGCCAGGCGGCCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QLWELPARTRGA*SLGLRARRPKG Trigger: GCCTTTGGGCCGCCTGGCGCGGAGCCCCAGGCTGCAGGCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CGACGCCCGCTCGACCTGCGAGTGCGCTTCGCAGGCTaGGGGGCCCGGATCCGCACCCCTCAGTTCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRPLDLRVRFAG*GARIRTPQFLP Trigger: GGGCAGGAACTGAGGGGTGCGGATCCGGGCCCCCCAGCCTGCGAAGCGCACTCGCAGGTCGAGCGGGCGTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CATCCCCGGGCGGGCCGGGGACAAAGCGCCGAGGCCTaGCGGCAGGGCCCATTACCAGAGCACCCGGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: HPRAGRGQSAEA*RQGPLPEHPAS Trigger: AGACGCCGGGTGCTCTGGTAATGGGCCCTGCCGCCAGGCCTCGGCGCTTTGTCCCCGGCCCGCCCGGGGATG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CAA 72 bp | CTTCCGGGGGTCCCTGCCCCGTCCATCGCCCTCATATaGTCGCCTCCCGGAGCTGGTGACTTCACGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LPGVPAPSIALI*SPPGAGDFTLP Trigger: GGGGAGCGTGAAGTCACCAGCTCCGGGAGGCGACAATATGAGGGCGATGGACGGGGCAGGGACCCCCGGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CAA 90 bp | AGGCGGCCCAAAGGCAGCCGCCAGCGCTTCCTGGGAAGACAAACCTaGGTGTACAACTCTAGCGTGGTAGCATCCCCGGGCGGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRPKGSRQRFLGRQT*VYNSSVVASPGGPG Trigger: CCCCGGCCCGCCCGGGGATGCTACCACGCTAGAGTTGTACACCAAGGTTTGTCTTCCCAGGAAGCGCTGGCGGCTGCCTTTGGGCCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CTCGGCGTGCTGTGGTTTGGGGGAGAAGCTGGACGCTaGCTTCATCTCTCCAGCTCTTCCGGGCGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGVLWFGGEAGR*LHLSSSSGRAA Trigger: GGCTGCGCGCCCGGAAGAGCTGGAGAGATGAAGCCAGCGTCCAGCTTCTCCCCCAAACCACAGCACGCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CAA 90 bp | AGGTTCGGCCTGTCTCCGGCCAGGACCCCGGGCCCTCTCTGGTGTTaGAAGCAGGGAGGCGGTCGCAGGCGACTTCTGGGAATTTCACGC | + |
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Preference number: 6 (lower is better) Translates to: RFGLSPARTPGPLWC*KQGGGRRRLLGISR Trigger: GCGTGAAATTCCCAGAAGTCGCCTGCGACCGCCTCCCTGCTTCAAACACCAGAGAGGGCCCGGGGTCCTGGCCGGAGACAGGCCGAACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS TCA 72 bp | GAGGCGGTCGCAGGCGACTTCTGGGAATTTCACGCATaGAAGCGGGGCTCCGAAGGGTGGACGACGCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: EAVAGDFWEFHA*KRGSEGWTTPA Trigger: AGCGGGCGTCGTCCACCCTTCGGAGCCCCGCTTTCATGCGTGAAATTCCCAGAAGTCGCCTGCGACCGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS TCA 72 bp | GTCCATCGCCCTCATATTGTCGCCTCCCGGAGCTGGTaGCTTCACGCTCCCCGGGGACAAAGCTCGGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: VHRPHIVASRSW*LHAPRGQSSAC Trigger: GCACGCCGAGCTTTGTCCCCGGGGAGCGTGAAGTCACCAGCTCCGGGAGGCGACAATATGAGGGCGATGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS GCA 72 bp | GGGCGCGCAGCCCATCAGATCGATCAATGTACCGGGTaGAGAAGCAGCTCCGGAGGTTCGGCCTGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GRAAHQIDQCTG*RSSSGGSACLR Trigger: CCGGAGACAGGCCGAACCTCCGGAGCTGCTTCTGCACCCGGTACATTGATCGATCTGATGGGCTGCGCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504184.3 ENST00000614284.1 |
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| CDS CCA 72 bp | AGCTCGGCGCGCAGCGGTGGGAATCCCGAGCGGAGTTaGAAGCCGGGCCCGTTCATTTGCATGCTAATACCC | + |
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Preference number: 6 (lower is better) Translates to: SSARSGGNPERS*KPGPFICMLIP Trigger: GGGTATTAGCATGCAAATGAACGGGCCCGGCTTCCAACTCCGCTCGGGATTCCCACCGCTGCGCGCCGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 72 bp | GAGCTCGGCGCGCAGCGGTGGGAATCCCGAGCGGAGTaGGAAGCCGGGCCCGTTCATTTGCATGCTAATACC | + |
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Preference number: 6 (lower is better) Translates to: ELGAQRWESRAE*EAGPVHLHANT Trigger: GGTATTAGCATGCAAATGAACGGGCCCGGCTTCCAACTCCGCTCGGGATTCCCACCGCTGCGCGCCGAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | GTTTGGAACACATACTTCGCTGCCTCTTTGCAACTGTaGGAACTTCCCGCCCGCACACGCGGCGCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VWNTYFAASLQL*ELPARTRGACS Trigger: GCTGCAGGCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 72 bp | AAAGGCAGCCGCCAGCGCTTCCTGGGAAGACAAACCTaGGTGTACAACTCTAGCGTGGTAGCATCCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: KGSRQRFLGRQT*VYNSSVVASPG Trigger: GCCCGGGGATGCTACCACGCTAGAGTTGTACACCAAGGTTTGTCTTCCCAGGAAGCGCTGGCGGCTGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 90 bp | AGTTTGGAACCGTGGAAAGTTTGGAACACATACTTCGCTGCCTCTTaGCAACTGTGGGAACTTCCCGCCCGCACACGCGGCGCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLEPWKVWNTYFAAS*QLWELPARTRGACS Trigger: GCTGCAGGCGCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS TCA 72 bp | CCAGGACACGAAACCAGAAGGCAGAGGTCTCGATTTTaGACTCGGATCATCCGCCAGGGCAACGCCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGHETRRQRSRF*TRIIRQGNARK Trigger: CTTCCGGGCGTTGCCCTGGCGGATGATCCGAGTTCAAAATCGAGACCTCTGCCTTCTGGTTTCGTGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 72 bp | CCGTGGAAAGTTTGGAACACATACTTCGCTGCCTCTTaGCAACTGTGGGAACTTCCCGCCCGCACACGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PWKVWNTYFAAS*QLWELPARTRG Trigger: GCCGCGTGTGCGGGCGGGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS GCA 72 bp | AATTCATTCTCTCCAACAGGAGTTTGGCATGTACTATaGCCTAGAGCGGAGGTGTGCAGGACAGGTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NSFSPTGVWHVL*PRAEVCRTGAA Trigger: AGCAGCACCTGTCCTGCACACCTCCGCTCTAGGGCATAGTACATGCCAAACTCCTGTTGGAGAGAATGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 72 bp | CCCCGCACACCGCTTCTCTTAATGGAAGCGCTCAGTTaGGAACCGTGGAAAGTTTGGAACACATACTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PRTPLLLMEALS*EPWKVWNTYFA Trigger: AGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGGTGTGCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 90 bp | ATGCTTTTCCCCCGCACACCGCTTCTCTTAATGGAAGCGCTCAGTTaGGAACCGTGGAAAGTTTGGAACACATACTTCGCTGCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MLFPRTPLLLMEALS*EPWKVWNTYFAASL Trigger: CAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGGTGTGCGGGGGAAAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CTTCATGCCTCTAATTCATTCTCTCCAACAGGAGTTTaGCATGTACTATGCCCTAGAGCGGAGGTGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LHASNSFSPTGV*HVLCPRAEVCR Trigger: CCTGCACACCTCCGCTCTAGGGCATAGTACATGCCAAACTCCTGTTGGAGAGAATGAATTAGAGGCATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CAA 90 bp | ACCGCTTCTCTTAATGGAAGCGCTCAGTTTGGAACCGTGGAAAGTTaGGAACACATACTTCGCTGCCTCTTTGCAACTGTGGGAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: TASLNGSAQFGTVES*EHILRCLFATVGTS Trigger: GGAAGTTCCCACAGTTGCAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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| CDS CCA 72 bp | CCGCTTCTCTTAATGGAAGCGCTCAGTTTGGAACCGTaGAAAGTTTGGAACACATACTTCGCTGCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLLLMEALSLEP*KVWNTYFAASL Trigger: CAAAGAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGCTTCCATTAAGAGAAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504184.3 |
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