Pregenerated sensors for LINC01520 (Homo sapiens)
Ensembl gene IDs: ENSG00000230962Ensembl transcript IDs: ENST00000441457.1, ENST00000652859.1, ENST00000659541.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTTaGGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTGAAGCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: EVGDRRGGSSLLPCI*AQALAHLSAAVKLY Trigger: GTAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652859.1 |
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| CDS GCA 90 bp | AGGTTTCACCGAGAGAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTaGTTCCGTGCATTTGAGCTCAGGCGCTGGCCCATTTATCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RFHRERWETGGVGLP*FRAFELRRWPIYLL Trigger: CAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTCTCTCGGTGAAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | GAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTTaGGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTGAAGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: EVGDRRGGSSLLPCI*AQALAHLSAAVKLF Trigger: AAAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659541.1 |
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| CDS CCA 90 bp | GCTGCTGAAACATTTGACTGCTTCCCCAAGAATCTGAAGCCTTTCTaGCAGCCATCTGGGAAGGTTTCACCGAGAGAGGTGGGAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: AAETFDCFPKNLKPF*QPSGKVSPREVGDR Trigger: CCTGTCTCCCACCTCTCTCGGTGAAACCTTCCCAGATGGCTGCCAGAAAGGCTTCAGATTCTTGGGGAAGCAGTCAAATGTTTCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 90 bp | GTAGAATGCCAGAGATGGGAAGCATCTCTCACAGGAGACAGATGCTaGGGAATGCAATTGAGAGGAAGGAGGAGAGGCACACTCCCATGG | + |
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Preference number: 5 (lower is better) Translates to: VECQRWEASLTGDRC*GMQLRGRRRGTLPW Trigger: CCATGGGAGTGTGCCTCTCCTCCTTCCTCTCAATTGCATTCCCCAGCATCTGTCTCCTGTGAGAGATGCTTCCCATCTCTGGCATTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | GATCATGTGAACGGTGTGGGGTTGGCCTCTCTGGACTTGATATCTTaGTGTGATCTTACCCTGAAGTCCCAGTCCACTCTGCTGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: DHVNGVGLASLDLIS*CDLTLKSQSTLLVI Trigger: GATCACCAGCAGAGTGGACTGGGACTTCAGGGTAAGATCACATCAAGATATCAAGTCCAGAGAGGCCAACCCCACACCGTTCACATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 90 bp | TGCTGGGGAATGCAATTGAGAGGAAGGAGGAGAGGCACACTCCCATaGGACCCCTTAGAGGTTGACAGAGATCCAAGGCACTTCTATTTT | + |
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Preference number: 5 (lower is better) Translates to: CWGMQLRGRRRGTLP*DPLEVDRDPRHFYF Trigger: AAAATAGAAGTGCCTTGGATCTCTGTCAACCTCTAAGGGGTCCCATGGGAGTGTGCCTCTCCTCCTTCCTCTCAATTGCATTCCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | CTTGTCAAATGGCTGCTGAAACATTTGACTGCTTCCCCAAGAATCTaGAGCCTTTCTGGCAGCCATCTGGGAAGGTTTCACCGAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LVKWLLKHLTASPRI*SLSGSHLGRFHRER Trigger: CCTCTCTCGGTGAAACCTTCCCAGATGGCTGCCAGAAAGGCTTCAGATTCTTGGGGAAGCAGTCAAATGTTTCAGCAGCCATTTGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | TGTGAACGGTGTGGGGTTGGCCTCTCTGGACTTGATATCTTGATGTaGTCTTACCCTGAAGTCCCAGTCCACTCTGCTGGTGATCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: CERCGVGLSGLDILM*SYPEVPVHSAGDLK Trigger: TTTAAGATCACCAGCAGAGTGGACTGGGACTTCAGGGTAAGATCACATCAAGATATCAAGTCCAGAGAGGCCAACCCCACACCGTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | CATTCTCTATGGACATCATCTGAGAGTCAGGGAGAGGCAGGAGGATaGCAGACTTGTCAAATGGCTGCTGAAACATTTGACTGCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: HSLWTSSESQGEAGG*QTCQMAAETFDCFP Trigger: GGGGAAGCAGTCAAATGTTTCAGCAGCCATTTGACAAGTCTGTCATCCTCCTGCCTCTCCCTGACTCTCAGATGATGTCCATAGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 90 bp | CACTGTGATGCAATGGAGAAAGCATGGTTTGGAATCACACCACTCTaGGTTGTTCTATCTTCTACGTATGCATCCATCCTGGGCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: HCDAMEKAWFGITPL*VVLSSTYASILGNL Trigger: CAGGTTGCCCAGGATGGATGCATACGTAGAAGATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCACAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS GCA 90 bp | TTCCTGGGAGCTCTTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTaGTTGATGGAAGAGTGTCGAGTTGAATTCACAGTGCTGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLGALVLQSFGVFRP*LMEECRVEFTVLFL Trigger: CAAGAACAGCACTGTGAATTCAACTCGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 90 bp | TGTACATCCTCATCAACACTGCTTATTGTCCAATTCTCTGTGTCTTaGAACTCCATTCCACAGTTCTGGGGCGGTCACACACAGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: CTSSSTLLIVQFSVS*NSIPQFWGGHTQDE Trigger: TTCATCCTGTGTGTGACCGCCCCAGAACTGTGGAATGGAGTTCCAAGACACAGAGAATTGGACAATAAGCAGTGTTGATGAGGATGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CCA 90 bp | TCCCAGTCCACTCTGCTGGTGATCTTAAAGATCACTGTGATGCAATaGAGAAAGCATGGTTTGGAATCACACCACTCTGGGTTGTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: SQSTLLVILKITVMQ*RKHGLESHHSGLFY Trigger: ATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCACAGTGATCTTTAAGATCACCAGCAGAGTGGACTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 90 bp | TTGAGAGTTAAGATCAACCAGGATTACAGTTGTCCTTTTAGAGGCTaGAAATCAATGACCTTCTGGAGCAATCCCGTCCGTTCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: LRVKINQDYSCPFRG*KSMTFWSNPVRSFM Trigger: CATGAAGGAACGGACGGGATTGCTCCAGAAGGTCATTGATTTTCAGCCTCTAAAAGGACAACTGTAATCCTGGTTGATCTTAACTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS GCA 90 bp | CTTAGGAAGATGAGAGTCTCTGTTGCTGTACATCCTCATCAACACTaGTTATTGTCCAATTCTCTGTGTCTTGGAACTCCATTCCACAGT | + |
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Preference number: 5 (lower is better) Translates to: LRKMRVSVAVHPHQH*LLSNSLCLGTPFHS Trigger: ACTGTGGAATGGAGTTCCAAGACACAGAGAATTGGACAATAAGCAGTGTTGATGAGGATGTACAGCAACAGAGACTCTCATCTTCCTAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CCA 90 bp | ACAGAAACTTCAAAAGAAGAATCTGCTCTGGAATTCTGTGTTTCCTaGGAGCTCTTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TETSKEESALEFCVS*ELLSCSHLEFSVLA Trigger: AGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAAACACAGAATTCCAGAGCAGATTCTTCTTTTGAAGTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 90 bp | TCTGCTGGTGATCTTAAAGATCACTGTGATGCAATGGAGAAAGCATaGTTTGGAATCACACCACTCTGGGTTGTTCTATCTTCTACGTAT | + |
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Preference number: 5 (lower is better) Translates to: SAGDLKDHCDAMEKA*FGITPLWVVLSSTY Trigger: ATACGTAGAAGATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCACAGTGATCTTTAAGATCACCAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | GACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTTaGGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: DRRGGSSLLPCI*AQALAHLSAAV Trigger: CACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 90 bp | AGAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTaGAGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTGAAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGGRQAGWVFLASVH*SSGAGPFICCSEAL Trigger: CAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441457.1 |
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| CDS CAA 90 bp | AGAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTaGAGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTGAAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: RGGRQAGWVFLASVH*SSGAGPFICCSEAL Trigger: TAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652859.1 |
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| CDS CAA 90 bp | AGAGGTGGGAGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTaGAGCTCAGGCGCTGGCCCATTTATCTGCTGCAGTGAAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGGRQAGWVFLASVH*SSGAGPFICCSEAL Trigger: AAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCTCCCACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659541.1 |
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| CDS CAA 72 bp | AGACAGGCGGGGTGGGTCTTCCTTGCTTCCGTGCATTaGAGCTCAGGCGCTGGCCCATTTATCTGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RQAGWVFLASVH*SSGAGPFICCS Trigger: ACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGAAGCAAGGAAGACCCACCCCGCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 72 bp | ATGCAATTGAGAGGAAGGAGGAGAGGCACACTCCCATaGGACCCCTTAGAGGTTGACAGAGATCCAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: MQLRGRRRGTLP*DPLEVDRDPRH Trigger: GTGCCTTGGATCTCTGTCAACCTCTAAGGGGTCCCATGGGAGTGTGCCTCTCCTCCTTCCTCTCAATTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 72 bp | CAGAGATGGGAAGCATCTCTCACAGGAGACAGATGCTaGGGAATGCAATTGAGAGGAAGGAGGAGAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: QRWEASLTGDRC*GMQLRGRRRGT Trigger: TGTGCCTCTCCTCCTTCCTCTCAATTGCATTCCCCAGCATCTGTCTCCTGTGAGAGATGCTTCCCATCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | TGTGGGGTTGGCCTCTCTGGACTTGATATCTTGATGTaGTCTTACCCTGAAGTCCCAGTCCACTCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CGVGLSGLDILM*SYPEVPVHSAG Trigger: ACCAGCAGAGTGGACTGGGACTTCAGGGTAAGATCACATCAAGATATCAAGTCCAGAGAGGCCAACCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | AACGGTGTGGGGTTGGCCTCTCTGGACTTGATATCTTaGTGTGATCTTACCCTGAAGTCCCAGTCCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: NGVGLASLDLIS*CDLTLKSQSTL Trigger: CAGAGTGGACTGGGACTTCAGGGTAAGATCACATCAAGATATCAAGTCCAGAGAGGCCAACCCCACACCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | GAGGAGAGGCACACTCCCATGGGACCCCTTAGAGGTTaGCAGAGATCCAAGGCACTTCTATTTTTGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EERHTPMGPLRG*QRSKALLFLSL Trigger: GAGACTCAAAAATAGAAGTGCCTTGGATCTCTGTCAACCTCTAAGGGGTCCCATGGGAGTGTGCCTCTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 72 bp | ACATTTGACTGCTTCCCCAAGAATCTGAAGCCTTTCTaGCAGCCATCTGGGAAGGTTTCACCGAGAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TFDCFPKNLKPF*QPSGKVSPREV Trigger: CACCTCTCTCGGTGAAACCTTCCCAGATGGCTGCCAGAAAGGCTTCAGATTCTTGGGGAAGCAGTCAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | TGGCTGCTGAAACATTTGACTGCTTCCCCAAGAATCTaGAGCCTTTCTGGCAGCCATCTGGGAAGGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: WLLKHLTASPRI*SLSGSHLGRFH Trigger: GTGAAACCTTCCCAGATGGCTGCCAGAAAGGCTTCAGATTCTTGGGGAAGCAGTCAAATGTTTCAGCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 72 bp | ACGTATGCATCCATCCTGGGCAACCTGCCCAACTACTaGGAGCTTTGGCCCTCTCATCTGTTAATTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TYASILGNLPNY*ELWPSHLLIGE Trigger: TTCTCCAATTAACAGATGAGAGGGCCAAAGCTCCAAGTAGTTGGGCAGGTTGCCCAGGATGGATGCATACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CAA 90 bp | GTGATGCAATGGAGAAAGCATGGTTTGGAATCACACCACTCTGGGTaGTTCTATCTTCTACGTATGCATCCATCCTGGGCAACCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VMQWRKHGLESHHSG*FYLLRMHPSWATCP Trigger: TGGGCAGGTTGCCCAGGATGGATGCATACGTAGAAGATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS GCA 72 bp | AATCACACCACTCTGGGTTGTTCTATCTTCTACGTATaGATCCATCCTGGGCAACCTGCCCAACTACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: NHTTLGCSIFYV*IHPGQPAQLLG Trigger: TCCAAGTAGTTGGGCAGGTTGCCCAGGATGGATGCATACGTAGAAGATAGAACAACCCAGAGTGGTGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CCA 72 bp | TCCATCCTGGGCAACCTGCCCAACTACTTGGAGCTTTaGCCCTCTCATCTGTTAATTGGAGAAACTAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SILGNLPNYLEL*PSHLLIGETKV Trigger: TACCTTAGTTTCTCCAATTAACAGATGAGAGGGCCAAAGCTCCAAGTAGTTGGGCAGGTTGCCCAGGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CCA 72 bp | TCTGTGTTTCCTGGGAGCTCTTGTCTTGCAGTCATTTaGAGTTTTCCGTCCTTGCTTGATGGAAGAGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: SVFPGSSCLAVI*SFPSLLDGRVS Trigger: CGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAAACACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 90 bp | CTATCTTCTACGTATGCATCCATCCTGGGCAACCTGCCCAACTACTaGGAGCTTTGGCCCTCTCATCTGTTAATTGGAGAAACTAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSSTYASILGNLPNY*ELWPSHLLIGETKV Trigger: TACCTTAGTTTCTCCAATTAACAGATGAGAGGGCCAAAGCTCCAAGTAGTTGGGCAGGTTGCCCAGGATGGATGCATACGTAGAAGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CCA 72 bp | TCATCAACACTGCTTATTGTCCAATTCTCTGTGTCTTaGAACTCCATTCCACAGTTCTGGGGCGGTCACACA | + |
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Preference number: 6 (lower is better) Translates to: SSTLLIVQFSVS*NSIPQFWGGHT Trigger: TGTGTGACCGCCCCAGAACTGTGGAATGGAGTTCCAAGACACAGAGAATTGGACAATAAGCAGTGTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CAA 72 bp | TGCTCTGGAATTCTGTGTTTCCTGGGAGCTCTTGTCTaGCAGTCATTTGGAGTTTTCCGTCCTTGCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: CSGILCFLGALV*QSFGVFRPCLM Trigger: CATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAAACACAGAATTCCAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 72 bp | GAATCTGCTCTGGAATTCTGTGTTTCCTGGGAGCTCTaGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ESALEFCVSWEL*SCSHLEFSVLA Trigger: AGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAAACACAGAATTCCAGAGCAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 90 bp | CTGGGAGCTCTTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTGCTaGATGGAAGAGTGTCGAGTTGAATTCACAGTGCTGTTCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LGALVLQSFGVFRPC*MEECRVEFTVLFLK Trigger: TTTCAAGAACAGCACTGTGAATTCAACTCGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 90 bp | AGAAGAATCTGCTCTGGAATTCTGTGTTTCCTGGGAGCTCTTGTCTaGCAGTCATTTGGAGTTTTCCGTCCTTGCTTGATGGAAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RRICSGILCFLGALV*QSFGVFRPCLMEEC Trigger: ACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGCTCCCAGGAAACACAGAATTCCAGAGCAGATTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS GCA 72 bp | GCTCTTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTaGTTGATGGAAGAGTGTCGAGTTGAATTCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: ALVLQSFGVFRP*LMEECRVEFTV Trigger: CACTGTGAATTCAACTCGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS GCA 72 bp | GTGCATTTGAGCTCAGGCGCTGGCCCATTTATCTGCTaGAGTGAAGCTCTGATTATGAGATTTTATTCACAG | + |
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Preference number: 6 (lower is better) Translates to: VHLSSGAGPFIC*SEALIMRFYSQ Trigger: CTGTGAATAAAATCTCATAATCAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441457.1 |
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| CDS GCA 72 bp | TCCGTGCATTTGAGCTCAGGCGCTGGCCCATTTATCTaGTGCAGTGAAGCTCTGATTATGAGATTTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: SVHLSSGAGPFI*CSEALIMRFYS Trigger: TGAATAAAATCTCATAATCAGAGCTTCACTGCAGCAGATAAATGGGCCAGCGCCTGAGCTCAAATGCACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441457.1 |
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| CDS CAA 72 bp | CTTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTGCTaGATGGAAGAGTGTCGAGTTGAATTCACAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVLQSFGVFRPC*MEECRVEFTVL Trigger: CAGCACTGTGAATTCAACTCGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | TTGTCTTGCAGTCATTTGGAGTTTTCCGTCCTTGCTTaGTGGAAGAGTGTCGAGTTGAATTCACAGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSCSHLEFSVLA*WKSVELNSQCC Trigger: ACAGCACTGTGAATTCAACTCGACACTCTTCCATCAAGCAAGGACGGAAAACTCCAAATGACTGCAAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | AAGATCAACCAGGATTACAGTTGTCCTTTTAGAGGCTaGAAATCAATGACCTTCTGGAGCAATCCCGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: KINQDYSCPFRG*KSMTFWSNPVR Trigger: ACGGACGGGATTGCTCCAGAAGGTCATTGATTTTCAGCCTCTAAAAGGACAACTGTAATCCTGGTTGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | TGGAAGAGTGTCGAGTTGAATTCACAGTGCTGTTCTTaGAAATTGTTTCAGAGATCATGTGAACGGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WKSVELNSQCCS*KLFQRSCERCG Trigger: CCCACACCGTTCACATGATCTCTGAAACAATTTTCAAGAACAGCACTGTGAATTCAACTCGACACTCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS CAA 90 bp | CTGGTGATCTTAAAGATCACTGTGATGCAATGGAGAAAGCATGGTTaGGAATCACACCACTCTGGGTTGTTCTATCTTCTACGTATGCAT | + |
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Preference number: 6 (lower is better) Translates to: LVILKITVMQWRKHG*ESHHSGLFYLLRMH Trigger: ATGCATACGTAGAAGATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCACAGTGATCTTTAAGATCACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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| CDS TCA 72 bp | TTTTACCAACATTTGCTCCCACTGAACTTAGGAAGATaGGAGTCTCTGTTGCTGTACATCCTCATCAACACT | + |
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Preference number: 6 (lower is better) Translates to: FYQHLLPLNLGR*ESLLLYILINT Trigger: AGTGTTGATGAGGATGTACAGCAACAGAGACTCTCATCTTCCTAAGTTCAGTGGGAGCAAATGTTGGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441457.1 ENST00000652859.1 |
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| CDS CCA 72 bp | GATCTTAAAGATCACTGTGATGCAATGGAGAAAGCATaGTTTGGAATCACACCACTCTGGGTTGTTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: DLKDHCDAMEKA*FGITPLWVVLS Trigger: AGATAGAACAACCCAGAGTGGTGTGATTCCAAACCATGCTTTCTCCATTGCATCACAGTGATCTTTAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000441457.1 ENST00000652859.1 ENST00000659541.1 |
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