Pregenerated sensors for LINC01519 (Homo sapiens)
Ensembl gene IDs: ENSG00000237267Ensembl transcript IDs: ENST00000454178.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAGAGGAGGATGTGGCAAGGACACAAGACACAGGACTCGAACTCTaGGGATGCAGGCTTGTCCATTGCAAGAAGGGGCAACCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: PEEDVARTQDTGLEL*GCRLVHCKKGQPAH Trigger: ATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGTCCTTGCCACATCCTCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 90 bp | GGGCTAACAATAACAGCTTTTGCGGAGTGCTCCCAGAGGAGGATGTaGCAAGGACACAAGACACAGGACTCGAACTCTGCGGATGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GLTITAFAECSQRRM*QGHKTQDSNSADAG Trigger: GCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGTCCTTGCCACATCCTCCTCTGGGAGCACTCCGCAAAAGCTGTTATTGTTAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 90 bp | TGGGCCCTGGGAGGACGCAGTTCAGAGATCAAAGTTCGAGGTCCCTaGGGAGGCATTAGGCTAAGAGAGTGCTCTTCACAGAAGACATGG | + |
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Preference number: 5 (lower is better) Translates to: WALGGRSSEIKVRGP*GGIRLRECSSQKTW Trigger: CCATGTCTTCTGTGAAGAGCACTCTCTTAGCCTAATGCCTCCTCAGGGACCTCGAACTTTGATCTCTGAACTGCGTCCTCCCAGGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 90 bp | GAGGATGTGGCAAGGACACAAGACACAGGACTCGAACTCTGCGGATaGAGGCTTGTCCATTGCAAGAAGGGGCAACCAGCCCATTTACAG | + |
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Preference number: 5 (lower is better) Translates to: EDVARTQDTGLELCG*RLVHCKKGQPAHLQ Trigger: CTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGTCCTTGCCACATCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 90 bp | GCAGGCTTGTCCATTGCAAGAAGGGGCAACCAGCCCATTTACAGATaGGCAAACAGAGGCCCAGGCGATACTCAACTGGTTCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: AGLSIARRGNQPIYR*ANRGPGDTQLVHVH Trigger: GTGAACATGAACCAGTTGAGTATCGCCTGGGCCTCTGTTTGCTCATCTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 90 bp | ACACAAGACACAGGACTCGAACTCTGCGGATGCAGGCTTGTCCATTaGAAGAAGGGGCAACCAGCCCATTTACAGATGAGCAAACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQDTGLELCGCRLVH*KKGQPAHLQMSKQR Trigger: CCTCTGTTTGCTCATCTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 90 bp | TCCAGGCATTTCCTTCAAAAGGGGACTCCTCTAGTGGGCAGTCTTTaGTTTGTTTCTTCTGGGACTGTGCAGAGACCTTGTCAAGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SRHFLQKGTPLVGSL*FVSSGTVQRPCQVC Trigger: GCAGACTTGACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGACTGCCCACTAGAGGAGTCCCCTTTTGAAGGAAATGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 90 bp | TCAAAAGGGGACTCCTCTAGTGGGCAGTCTTTGCTTTGTTTCTTCTaGGACTGTGCAGAGACCTTGTCAAGTCTGCATGGTGGTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: SKGDSSSGQSLLCFF*DCAETLSSLHGGLM Trigger: CATCAGACCACCATGCAGACTTGACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGACTGCCCACTAGAGGAGTCCCCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 90 bp | CTCTCCGGCATCTCTATGCTAGACACAACTGGAGTAAGCAGTGGATaGGAACACTGGAGCTGGAATCATATCACCTGGATTCAAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: LSGISMLDTTGVSSG*EHWSWNHITWIQIL Trigger: CAGGATTTGAATCCAGGTGATATGATTCCAGCTCCAGTGTTCTCATCCACTGCTTACTCCAGTTGTGTCTAGCATAGAGATGCCGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 90 bp | GCCATCACACCCCAGGAATTAATCCACAATAAGCTTTTCTATTTCTaGCTCCATCTTAGCCACTGCTTTCCAGAGAACCTGTTAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: AITPQELIHNKLFYF*LHLSHCFPENLLVP Trigger: TGGCACTAACAGGTTCTCTGGAAAGCAGTGGCTAAGATGGAGTCAGAAATAGAAAAGCTTATTGTGGATTAATTCCTGGGGTGTGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 90 bp | ATTTCTCTCCGGCATCTCTATGCTAGACACAACTGGAGTAAGCAGTaGATGAGAACACTGGAGCTGGAATCATATCACCTGGATTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: ISLRHLYARHNWSKQ*MRTLELESYHLDSN Trigger: ATTTGAATCCAGGTGATATGATTCCAGCTCCAGTGTTCTCATCCACTGCTTACTCCAGTTGTGTCTAGCATAGAGATGCCGGAGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 90 bp | GGTTTGCTCTTCCCAGTGCTGTCTATGGATTGTACACAAAGACTCTaGTATTGTCAAGCTGGCTTTGCCAAGTTGACAATCGATGTTACA | + |
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Preference number: 5 (lower is better) Translates to: GLLFPVLSMDCTQRL*YCQAGFAKLTIDVT Trigger: TGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAAGAGCAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 90 bp | AACACTGGAGCTGGAATCATATCACCTGGATTCAAATCCTGTTCCTaGCACTTGCTACTATTCATGACAGTGGAAAAGTTTACCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: NTGAGIISPGFKSCS*HLLLFMTVEKFTTC Trigger: ACAGGTGGTAAACTTTTCCACTGTCATGAATAGTAGCAAGTGGCAGGAACAGGATTTGAATCCAGGTGATATGATTCCAGCTCCAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 90 bp | GTCTATGGATTGTACACAAAGACTCTGGTATTGTCAAGCTGGCTTTaGCAAGTTGACAATCGATGTTACAGAGGACAAAGAATCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VYGLYTKTLVLSSWL*QVDNRCYRGQRIPE Trigger: CTCTGGGATTCTTTGTCCTCTGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 90 bp | AGTGCTGTCTATGGATTGTACACAAAGACTCTGGTATTGTCAAGCTaGCTTTGCCAAGTTGACAATCGATGTTACAGAGGACAAAGAATC | + |
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Preference number: 5 (lower is better) Translates to: SAVYGLYTKTLVLSS*LCQVDNRCYRGQRI Trigger: GATTCTTTGTCCTCTGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 72 bp | ACAGGACTCGAACTCTGCGGATGCAGGCTTGTCCATTaGAAGAAGGGGCAACCAGCCCATTTACAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: TGLELCGCRLVH*KKGQPAHLQMS Trigger: GCTCATCTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 72 bp | GATGTGGCAAGGACACAAGACACAGGACTCGAACTCTaGGGATGCAGGCTTGTCCATTGCAAGAAGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: DVARTQDTGLEL*GCRLVHCKKGQ Trigger: TTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGTCCTTGCCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 72 bp | ATAACAGCTTTTGCGGAGTGCTCCCAGAGGAGGATGTaGCAAGGACACAAGACACAGGACTCGAACTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ITAFAECSQRRM*QGHKTQDSNSA Trigger: CGCAGAGTTCGAGTCCTGTGTCTTGTGTCCTTGCCACATCCTCCTCTGGGAGCACTCCGCAAAAGCTGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | CACAGGACTCGAACTCTGCGGATGCAGGCTTGTCCATaGCAAGAAGGGGCAACCAGCCCATTTACAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: HRTRTLRMQACP*QEGATSPFTDE Trigger: CTCATCTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | CACAAGACACAGGACTCGAACTCTGCGGATGCAGGCTaGTCCATTGCAAGAAGGGGCAACCAGCCCATTTAC | + |
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Preference number: 6 (lower is better) Translates to: HKTQDSNSADAG*SIARRGNQPIY Trigger: GTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 72 bp | GGAGGACGCAGTTCAGAGATCAAAGTTCGAGGTCCCTaGGGAGGCATTAGGCTAAGAGAGTGCTCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: GGRSSEIKVRGP*GGIRLRECSSQ Trigger: CTGTGAAGAGCACTCTCTTAGCCTAATGCCTCCTCAGGGACCTCGAACTTTGATCTCTGAACTGCGTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | GACACAAGACACAGGACTCGAACTCTGCGGATGCAGGCTTGTCCATaGCAAGAAGGGGCAACCAGCCCATTTACAGATGAGCAAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: DTRHRTRTLRMQACP*QEGATSPFTDEQTE Trigger: CTCTGTTTGCTCATCTGTAAATGGGCTGGTTGCCCCTTCTTGCAATGGACAAGCCTGCATCCGCAGAGTTCGAGTCCTGTGTCTTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 72 bp | GTTACAGAGGACAAAGAATCCCAGAGGATGAACTTCTaGCACTTGACCTGGTGTCCTGGGAGATGCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: VTEDKESQRMNF*HLTWCPGRCLS Trigger: ACTCAGGCATCTCCCAGGACACCAGGTCAAGTGGCAGAAGTTCATCCTCTGGGATTCTTTGTCCTCTGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | GTCCAGGCATTTCCTTCAAAAGGGGACTCCTCTAGTGGGCAGTCTTaGCTTTGTTTCTTCTGGGACTGTGCAGAGACCTTGTCAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VQAFPSKGDSSSGQS*LCFFWDCAETLSSL Trigger: CAGACTTGACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGACTGCCCACTAGAGGAGTCCCCTTTTGAAGGAAATGCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 72 bp | GACTCCTCTAGTGGGCAGTCTTTGCTTTGTTTCTTCTaGGACTGTGCAGAGACCTTGTCAAGTCTGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: DSSSGQSLLCFF*DCAETLSSLHG Trigger: ACCATGCAGACTTGACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGACTGCCCACTAGAGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | TTCCTCTTTAGCTACCCTGAGGGTTTAGTGCTGGCCTCTCATGGTTaGCTCTTCCCAGTGCTGTCTATGGATTGTACACAAAGACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLFSYPEGLVLASHG*LFPVLSMDCTQRLW Trigger: CCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAAGAGCAAACCATGAGAGGCCAGCACTAAACCCTCAGGGTAGCTAAAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 72 bp | TTCCTTCAAAAGGGGACTCCTCTAGTGGGCAGTCTTTaGTTTGTTTCTTCTGGGACTGTGCAGAGACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: FLQKGTPLVGSL*FVSSGTVQRPC Trigger: ACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGACTGCCCACTAGAGGAGTCCCCTTTTGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 72 bp | GGCATTAGGCTAAGAGAGTGCTCTTCACAGAAGACATaGAGACAACACCCCTGTAATTTCTCTCCGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: GIRLRECSSQKT*RQHPCNFSPAS Trigger: AGATGCCGGAGAGAAATTACAGGGGTGTTGTCTCCATGTCTTCTGTGAAGAGCACTCTCTTAGCCTAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | TCTTTGCTTTGTTTCTTCTGGGACTGTGCAGAGACCTaGTCAAGTCTGCATGGTGGTCTGATGGCTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLLCFFWDCAET*SSLHGGLMAPD Trigger: ATCAGGAGCCATCAGACCACCATGCAGACTTGACAAGGTCTCTGCACAGTCCCAGAAGAAACAAAGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | GCCCTTTGTGATACTTGTGATACGTACACCGTTTCTTCAGGGCAGTaGAACAGTTGCCCAGTGGCATGGAATCCATGTTACACCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ALCDTCDTYTVSSGQ*NSCPVAWNPCYTCL Trigger: AAGACAGGTGTAACATGGATTCCATGCCACTGGGCAACTGTTCAACTGCCCTGAAGAAACGGTGTACGTATCACAAGTATCACAAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | AGTGCTGGCCTCTCATGGTTTGCTCTTCCCAGTGCTGTCTATGGATaGTACACAAAGACTCTGGTATTGTCAAGCTGGCTTTGCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SAGLSWFALPSAVYG*YTKTLVLSSWLCQV Trigger: AACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAAGAGCAAACCATGAGAGGCCAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | GATACTTGTGATACGTACACCGTTTCTTCAGGGCAGTaGAACAGTTGCCCAGTGGCATGGAATCCATGTTAC | + |
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Preference number: 6 (lower is better) Translates to: DTCDTYTVSSGQ*NSCPVAWNPCY Trigger: GTAACATGGATTCCATGCCACTGGGCAACTGTTCAACTGCCCTGAAGAAACGGTGTACGTATCACAAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | GGAGCTGGAATCATATCACCTGGATTCAAATCCTGTTCCTGCCACTaGCTACTATTCATGACAGTGGAAAAGTTTACCACCTGTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GAGIISPGFKSCSCH*LLFMTVEKFTTCGR Trigger: TCTGCCACAGGTGGTAAACTTTTCCACTGTCATGAATAGTAGCAAGTGGCAGGAACAGGATTTGAATCCAGGTGATATGATTCCAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 90 bp | GCTCTTCCCAGTGCTGTCTATGGATTGTACACAAAGACTCTGGTATaGTCAAGCTGGCTTTGCCAAGTTGACAATCGATGTTACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALPSAVYGLYTKTLV*SSWLCQVDNRCYRG Trigger: TCCTCTGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | CTCTCATGGTTTGCTCTTCCCAGTGCTGTCTATGGATaGTACACAAAGACTCTGGTATTGTCAAGCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSWFALPSAVYG*YTKTLVLSSWL Trigger: AAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAAGAGCAAACCATGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 72 bp | TTCCCAGTGCTGTCTATGGATTGTACACAAAGACTCTaGTATTGTCAAGCTGGCTTTGCCAAGTTGACAATC | + |
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Preference number: 6 (lower is better) Translates to: FPVLSMDCTQRL*YCQAGFAKLTI Trigger: GATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 72 bp | CCCCAGGAATTAATCCACAATAAGCTTTTCTATTTCTaGCTCCATCTTAGCCACTGCTTTCCAGAGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: PQELIHNKLFYF*LHLSHCFPENL Trigger: CAGGTTCTCTGGAAAGCAGTGGCTAAGATGGAGTCAGAAATAGAAAAGCTTATTGTGGATTAATTCCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | AGTGCTGTCTATGGATTGTACACAAAGACTCTGGTATaGTCAAGCTGGCTTTGCCAAGTTGACAATCGATGT | + |
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Preference number: 6 (lower is better) Translates to: SAVYGLYTKTLV*SSWLCQVDNRC Trigger: ACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATAGACAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS GCA 72 bp | TTGTACACAAAGACTCTGGTATTGTCAAGCTGGCTTTaGCAAGTTGACAATCGATGTTACAGAGGACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LYTKTLVLSSWL*QVDNRCYRGQR Trigger: TCTTTGTCCTCTGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CCA 72 bp | TATGGATTGTACACAAAGACTCTGGTATTGTCAAGCTaGCTTTGCCAAGTTGACAATCGATGTTACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: YGLYTKTLVLSS*LCQVDNRCYRG Trigger: TCCTCTGTAACATCGATTGTCAACTTGGCAAAGCCAGCTTGACAATACCAGAGTCTTTGTGTACAATCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS CAA 72 bp | ATCATATCACCTGGATTCAAATCCTGTTCCTGCCACTaGCTACTATTCATGACAGTGGAAAAGTTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: IISPGFKSCSCH*LLFMTVEKFTT Trigger: GGTGGTAAACTTTTCCACTGTCATGAATAGTAGCAAGTGGCAGGAACAGGATTTGAATCCAGGTGATATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 72 bp | TCCAAAGCAAACAGCACATATAGAATCAGAGACTTGTaGAACATCATGGCTTCGAAACAGTCTCACCTAATG | + |
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Preference number: 6 (lower is better) Translates to: SKANSTYRIRDL*NIMASKQSHLM Trigger: CATTAGGTGAGACTGTTTCGAAGCCATGATGTTTCACAAGTCTCTGATTCTATATGTGCTGTTTGCTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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| CDS TCA 72 bp | GCAAGGTTATCTAAGTTTTCTAGGTTTACTGGAGAGTaGGTCTTGCATTCCCCATTAGATGATAAGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: ARLSKFSRFTGE*VLHSPLDDKFT Trigger: TGTGAACTTATCATCTAATGGGGAATGCAAGACTCACTCTCCAGTAAACCTAGAAAACTTAGATAACCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454178.1 |
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