Pregenerated sensors for LINC01514 (Homo sapiens)
Ensembl gene IDs: ENSG00000237579Ensembl transcript IDs: ENST00000434189.2, ENST00000660354.1, ENST00000666262.1, ENST00000666640.1, ENST00000669629.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGTGTCAAGTGCTTTGCTCAGGTGAGTTACCGCTTAGACAATGTTaGGGATGTGCTGAAGAGGAAGATGAGGTAGGTGATGTTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PCQVLCSGELPLRQC*GCAEEEDEVGDVGG Trigger: CCCGCCAACATCACCTACCTCATCTTCCTCTTCAGCACATCCCCAACATTGTCTAAGCGGTAACTCACCTGAGCAAAGCACTTGACACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS CCA 90 bp | CAAGGATGCTGCATGAGCAATGCTGTGTCCTTCTCGGCGCATCAATaGGGAAGCACAGGATGTCGGTTTGCCCCATTATTGGTGATGCTA | + |
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Preference number: 5 (lower is better) Translates to: QGCCMSNAVSFSAHQ*GSTGCRFAPLLVML Trigger: TAGCATCACCAATAATGGGGCAAACCGACATCCTGTGCTTCCCCATTGATGCGCCGAGAAGGACACAGCATTGCTCATGCAGCATCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS GCA 90 bp | TTAGATTCCGTTTACGCATTTTTGACAAGGATGCTGCATGAGCAATaGTGTGTCCTTCTCGGCGCATCAATGGGGAAGCACAGGATGTCG | + |
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Preference number: 5 (lower is better) Translates to: LDSVYAFLTRMLHEQ*CVLLGASMGKHRMS Trigger: CGACATCCTGTGCTTCCCCATTGATGCGCCGAGAAGGACACAGCATTGCTCATGCAGCATCCTTGTCAAAAATGCGTAAACGGAATCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS TCA 90 bp | GACTCTCCAGCTATGGGACCTCATCAGGTTGTTGTGAGGAGTAAATaGATGAATCCGTGTCAAGTGCTTTGCTCAGGTGAGTTACCGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSPAMGPHQVVVRSK*MNPCQVLCSGELPL Trigger: AAGCGGTAACTCACCTGAGCAAAGCACTTGACACGGATTCATTCATTTACTCCTCACAACAACCTGATGAGGTCCCATAGCTGGAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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| CDS CCA 90 bp | TTTGCCCCATTATTGGTGATGCTACCTTTGATCACTTGGTTAACATaGTTCCTGCCAGATCTATCCATTGTAAAGGTTATTGTTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FAPLLVMLPLITWLT*FLPDLSIVKVIVFP Trigger: GGGAAAAACAATAACCTTTACAATGGATAGATCTGGCAGGAACCATGTTAACCAAGTGATCAAAGGTAGCATCACCAATAATGGGGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS GCA 90 bp | CATCCATTGATGATTCTTTTCAGAATCAATCACTACTGTAGTGGTTaGAAAATGGAGTTGACTCAACATCTAGAATTAGCTGCCATTATC | + |
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Preference number: 5 (lower is better) Translates to: HPLMILFRINHYCSG*KMELTQHLELAAII Trigger: GATAATGGCAGCTAATTCTAGATGTTGAGTCAACTCCATTTTGCAACCACTACAGTAGTGATTGATTCTGAAAAGAATCATCAATGGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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| CDS GCA 72 bp | GATTCAGACTCAGGCTTGTCTGACTCAAGAGCTTGCTaGAGCGATGACTCTCCAGCTATGGGACCTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: DSDSGLSDSRAC*SDDSPAMGPHQ Trigger: CTGATGAGGTCCCATAGCTGGAGAGTCATCGCTGCAGCAAGCTCTTGAGTCAGACAAGCCTGAGTCTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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| CDS CCA 72 bp | TGCATGAGCAATGCTGTGTCCTTCTCGGCGCATCAATaGGGAAGCACAGGATGTCGGTTTGCCCCATTATTG | + |
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Preference number: 6 (lower is better) Translates to: CMSNAVSFSAHQ*GSTGCRFAPLL Trigger: CAATAATGGGGCAAACCGACATCCTGTGCTTCCCCATTGATGCGCCGAGAAGGACACAGCATTGCTCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS GCA 72 bp | CTCGGCGCATCAATGGGGAAGCACAGGATGTCGGTTTaGCCCATTATTGGTGATGCTACCTTTGATCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LGASMGKHRMSV*PIIGDATFDHL Trigger: CAAGTGATCAAAGGTAGCATCACCAATAATGGGGCAAACCGACATCCTGTGCTTCCCCATTGATGCGCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS CAA 72 bp | TTTCCACGTAGAGGTCCAGAGGTAGAGAGGGCAGGTTaGGTGCAGAAACTGCTCCATGAAGTTCTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FPRRGPEVERAG*VQKLLHEVLRN Trigger: GTTCCTGAGAACTTCATGGAGCAGTTTCTGCACCAAACCTGCCCTCTCTACCTCTGGACCTCTACGTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434189.2 ENST00000666640.1 |
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| CDS CAA 72 bp | CTCCAGGACAATCCCCACATTAGGAGAGAACCCAGGTaGGTTATTGCAGAGACTGCTTCCAGAAAGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LQDNPHIRREPR*VIAETASRKAL Trigger: CAAAGCCTTTCTGGAAGCAGTCTCTGCAATAACCAACCTGGGTTCTCTCCTAATGTGGGGATTGTCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS TCA 72 bp | GCTATGGGACCTCATCAGGTTGTTGTGAGGAGTAAATaGATGAATCCGTGTCAAGTGCTTTGCTCAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AMGPHQVVVRSK*MNPCQVLCSGE Trigger: CTCACCTGAGCAAAGCACTTGACACGGATTCATTCATTTACTCCTCACAACAACCTGATGAGGTCCCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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| CDS CAA 90 bp | GGAAGCACAGGATGTCGGTTTGCCCCATTATTGGTGATGCTACCTTaGATCACTTGGTTAACATGGTTCCTGCCAGATCTATCCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: GSTGCRFAPLLVMLP*ITWLTWFLPDLSIV Trigger: TACAATGGATAGATCTGGCAGGAACCATGTTAACCAAGTGATCAAAGGTAGCATCACCAATAATGGGGCAAACCGACATCCTGTGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS CAA 72 bp | GGATGTCGGTTTGCCCCATTATTGGTGATGCTACCTTaGATCACTTGGTTAACATGGTTCCTGCCAGATCTA | + |
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Preference number: 6 (lower is better) Translates to: GCRFAPLLVMLP*ITWLTWFLPDL Trigger: TAGATCTGGCAGGAACCATGTTAACCAAGTGATCAAAGGTAGCATCACCAATAATGGGGCAAACCGACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS TCA 72 bp | ATTTCTGAAGAGTTTGGCTGTCTGGCAGTTTTCTCATaGTTAGATTCCGTTTACGCATTTTTGACAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: ISEEFGCLAVFS*LDSVYAFLTRM Trigger: CATCCTTGTCAAAAATGCGTAAACGGAATCTAATCATGAGAAAACTGCCAGACAGCCAAACTCTTCAGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000434189.2 ENST00000660354.1 ENST00000666262.1 ENST00000666640.1 ENST00000669629.1 |
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| CDS CAA 72 bp | AGAATCAATCACTACTGTAGTGGTTGCAAAATGGAGTaGACTCAACATCTAGAATTAGCTGCCATTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: RINHYCSGCKME*TQHLELAAIIS Trigger: TGAGATAATGGCAGCTAATTCTAGATGTTGAGTCAACTCCATTTTGCAACCACTACAGTAGTGATTGATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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| CDS CAA 90 bp | ATTCTTTTCAGAATCAATCACTACTGTAGTGGTTGCAAAATGGAGTaGACTCAACATCTAGAATTAGCTGCCATTATCTCACTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ILFRINHYCSGCKME*TQHLELAAIISLST Trigger: AGTGGAAAGTGAGATAATGGCAGCTAATTCTAGATGTTGAGTCAACTCCATTTTGCAACCACTACAGTAGTGATTGATTCTGAAAAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666262.1 |
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