Pregenerated sensors for LINC01508 (Homo sapiens)
Ensembl gene IDs: ENSG00000231107Ensembl transcript IDs: ENST00000425666.2, ENST00000436671.2, ENST00000659218.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATACCTGTGTCGCTGCGAGCTTTCGTCCATGCATCTGCAGTGCACTaGCCTAGCCACTCTGCTCCTCTTTCCTGGTGTCTCCTTTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: IPVSLRAFVHASAVH*PSHSAPLSWCLLCL Trigger: CAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGCAGATGCATGGACGAAAGCTCGCAGCGACACAGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS GCA 90 bp | ACCCCATACCTGTGTCGCTGCGAGCTTTCGTCCATGCATCTGCAGTaGACTGCCCTAGCCACTCTGCTCCTCTTTCCTGGTGTCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TPYLCRCELSSMHLQ*TALATLLLFPGVSF Trigger: AAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGCAGATGCATGGACGAAAGCTCGCAGCGACACAGGTATGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS TCA 90 bp | GTAGGTGCACAGTCTCTCCCCACCCGCGTCGTCACAGTCAGTGCCTaGGTTCTCTCTGGCAAGTTCAAGTTCGAGAGAGAGTGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VGAQSLPTRVVTVSA*VLSGKFKFERECVS Trigger: GGAAACACACTCTCTCTCGAACTTGAACTTGCCAGAGAGAACTCAGGCACTGACTGTGACGACGCGGGTGGGGAGAGACTGTGCACCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS GCA 90 bp | ACGTGTAGGTGCACAGTCTCTCCCCACCCGCGTCGTCACAGTCAGTaGCTGAGTTCTCTCTGGCAAGTTCAAGTTCGAGAGAGAGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TCRCTVSPHPRRHSQ*LSSLWQVQVRERVC Trigger: ACACACTCTCTCTCGAACTTGAACTTGCCAGAGAGAACTCAGGCACTGACTGTGACGACGCGGGTGGGGAGAGACTGTGCACCTACACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS TCA 90 bp | CCTCTGGGAAAGCATGCTCCTCATTCTGCTGCTCACACTCATCCCTaGTTAGACACCCCATACCTGTGTCGCTGCGAGCTTTCGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PLGKHAPHSAAHTHP*LDTPYLCRCELSSM Trigger: CATGGACGAAAGCTCGCAGCGACACAGGTATGGGGTGTCTAATCAGGGATGAGTGTGAGCAGCAGAATGAGGAGCATGCTTTCCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS TCA 90 bp | GACATTTGCACCGTTTGTCAACTTGTTGGAATCTGGAGGCCTTTGTaGAGTGACACGTGTAGGTGCACAGTCTCTCCCCACCCGCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: DICTVCQLVGIWRPL*SDTCRCTVSPHPRR Trigger: ACGACGCGGGTGGGGAGAGACTGTGCACCTACACGTGTCACTTCACAAAGGCCTCCAGATTCCAACAAGTTGACAAACGGTGCAAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS GCA 90 bp | AGTGGCTTCCTCTCTTCCTCTGGGAAAGCATGCTCCTCATTCTGCTaGTCACACTCATCCCTGATTAGACACCCCATACCTGTGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGFLSSSGKACSSFC*SHSSLIRHPIPVSL Trigger: CAGCGACACAGGTATGGGGTGTCTAATCAGGGATGAGTGTGAGCAGCAGAATGAGGAGCATGCTTTCCCAGAGGAAGAGAGGAAGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS GCA 90 bp | TCCAGTGGCTTCCTCTCTTCCTCTGGGAAAGCATGCTCCTCATTCTaGTGCTCACACTCATCCCTGATTAGACACCCCATACCTGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: SSGFLSSSGKACSSF*CSHSSLIRHPIPVS Trigger: CGACACAGGTATGGGGTGTCTAATCAGGGATGAGTGTGAGCAGCAGAATGAGGAGCATGCTTTCCCAGAGGAAGAGAGGAAGCCACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS GCA 90 bp | GTGCACTGCCCTAGCCACTCTGCTCCTCTTTCCTGGTGTCTCCTTTaGCTGATCATAAGCCCCTATTGTGTCCAGAATTGGTTCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: VHCPSHSAPLSWCLL*LIISPYCVQNWFLP Trigger: CGGAAGGAACCAATTCTGGACACAATAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS TCA 90 bp | GGCCTTGCCAGCCACTTCATGAAGATCACAAGACATACGGGTCTTTaGTCTGCTATTGCTGAACGTGGCCTGCTCACTAAGCAGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: GLASHFMKITRHTGL*SAIAERGLLTKQVT Trigger: GGTGACCTGCTTAGTGAGCAGGCCACGTTCAGCAATAGCAGATCAAAGACCCGTATGTCTTGTGATCTTCATGAAGTGGCTGGCAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS TCA 90 bp | CACGTGGTGATGGGATCAGAATCTCTGGCCTTGCCAGCCACTTCATaGAGATCACAAGACATACGGGTCTTTGATCTGCTATTGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: HVVMGSESLALPATS*RSQDIRVFDLLLLN Trigger: GTTCAGCAATAGCAGATCAAAGACCCGTATGTCTTGTGATCTTCATGAAGTGGCTGGCAAGGCCAGAGATTCTGATCCCATCACCACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS TCA 90 bp | TCTCCTTTGCCTGATCATAAGCCCCTTTTTCTATCTTCCTGCAGATaGAGGTCTCCGATGTTACCCACAATGAGTAGCAGGAGGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: SPLPDHKPLFLSSCR*RSPMLPTMSSRRPC Trigger: GCATGGCCTCCTGCTACTCATTGTGGGTAACATCGGAGACCTTCATCTGCAGGAAGATAGAAAAAGGGGCTTATGATCAGGCAAAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS GCA 90 bp | TCACAAGACATACGGGTCTTTGATCTGCTATTGCTGAACGTGGCCTaGTCACTAAGCAGGTCACCTCTGCCCTGTAAGTTTAATTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SQDIRVFDLLLLNVA*SLSRSPLPCKFNSG Trigger: ACCTGAATTAAACTTACAGGGCAGAGGTGACCTGCTTAGTGAGCAGGCCACGTTCAGCAATAGCAGATCAAAGACCCGTATGTCTTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS GCA 72 bp | TCGCTGCGAGCTTTCGTCCATGCATCTGCAGTGCACTaGCCTAGCCACTCTGCTCCTCTTTCCTGGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SLRAFVHASAVH*PSHSAPLSWCL Trigger: GAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGCAGATGCATGGACGAAAGCTCGCAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS CCA 72 bp | GCAGTGCACTGCCCTAGCCACTCTGCTCCTCTTTCCTaGTGTCTCCTTTGCCTGATCATAAGCCCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AVHCPSHSAPLS*CLLCLIISPWR Trigger: CCTCCAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS GCA 72 bp | TGCACAGTCTCTCCCCACCCGCGTCGTCACAGTCAGTaGCTGAGTTCTCTCTGGCAAGTTCAAGTTCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: CTVSPHPRRHSQ*LSSLWQVQVRE Trigger: CTCTCGAACTTGAACTTGCCAGAGAGAACTCAGGCACTGACTGTGACGACGCGGGTGGGGAGAGACTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS TCA 72 bp | CTCCTTTGCCTGATCATAAGCCCCTGGAGGCCTTTGTaGAGTGACACGTGTAGGTGCACAGTCTCTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLCLIISPWRPL*SDTCRCTVSPH Trigger: GTGGGGAGAGACTGTGCACCTACACGTGTCACTTCACAAAGGCCTCCAGGGGCTTATGATCAGGCAAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS CCA 72 bp | GACACCACCTCAGCCACTCTTCATATCTCCAGTCTTTaGTGGCCCCTGTGCCGTCATCAGAATCTGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: DTTSATLHISSL*WPLCRHQNLPL Trigger: AAGGGGCAGATTCTGATGACGGCACAGGGGCCACCAAAGACTGGAGATATGAAGAGTGGCTGAGGTGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS CAA 72 bp | AGACACCACCTCAGCCACTCTTCATATCTCCAGTCTTaGGTGGCCCCTGTGCCGTCATCAGAATCTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RHHLSHSSYLQS*VAPVPSSESAP Trigger: AGGGGCAGATTCTGATGACGGCACAGGGGCCACCAAAGACTGGAGATATGAAGAGTGGCTGAGGTGGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS TCA 72 bp | CTTCCTGCAGATGAAGGTCTCCGATGTTACCCACAATaGGTAGCAGGAGGCCATGCAGACAACAGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPADEGLRCYPQ*VAGGHADNRQP Trigger: TGGCTGCCTGTTGTCTGCATGGCCTCCTGCTACTCATTGTGGGTAACATCGGAGACCTTCATCTGCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS CCA 72 bp | CACCCGCGTCGTCACAGTCAGTGCCTGAGTTCTCTCTaGCAAGTTCAAGTTCGAGAGAGAGTGTGTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HPRRHSQCLSSL*QVQVRERVCFL Trigger: GAGGAAACACACTCTCTCTCGAACTTGAACTTGCCAGAGAGAACTCAGGCACTGACTGTGACGACGCGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425666.2 |
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| CDS CCA 72 bp | GCAGTGCACTGCCCTAGCCACTCTGCTCCTCTTTCCTaGTGTCTCCTTTGCCTGATCATAAGCCCCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: AVHCPSHSAPLS*CLLCLIISPFF Trigger: GAAAAAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS CCA 72 bp | GCAGTGCACTGCCCTAGCCACTCTGCTCCTCTTTCCTaGTGTCTCCTTTGCCTGATCATAAGCCCCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: AVHCPSHSAPLS*CLLCLIISPYC Trigger: ACAATAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGGGCAGTGCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS TCA 72 bp | AAGCATGCTCCTCATTCTGCTGCTCACACTCATCCCTaGTTAGACACCCCATACCTGTGTCGCTGCGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: KHAPHSAAHTHP*LDTPYLCRCEL Trigger: AAGCTCGCAGCGACACAGGTATGGGGTGTCTAATCAGGGATGAGTGTGAGCAGCAGAATGAGGAGCATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425666.2 ENST00000436671.2 ENST00000659218.1 |
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| CDS CAA 90 bp | CCCCTATTGTGTCCAGAATTGGTTCCTTCCGGTGGATTCGTGGTCTaGCTGACTTCAAGAATGGAGCTGCGGACTTTTGCCGTGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PLLCPELVPSGGFVV*LTSRMELRTFAVSV Trigger: AACACTCACGGCAAAAGTCCGCAGCTCCATTCTTGAAGTCAGCAAGACCACGAATCCACCGGAAGGAACCAATTCTGGACACAATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS TCA 72 bp | ACCGTTTGTCAACTTGTTGGAATCTGGAGGCCTTTGTaGAGTGACACGTGTAGGTGCACAGTCTCTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: TVCQLVGIWRPL*SDTCRCTVSPH Trigger: GTGGGGAGAGACTGTGCACCTACACGTGTCACTTCACAAAGGCCTCCAGATTCCAACAAGTTGACAAACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS GCA 72 bp | CCTAGCCACTCTGCTCCTCTTTCCTGGTGTCTCCTTTaGCTGATCATAAGCCCCTATTGTGTCCAGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PSHSAPLSWCLL*LIISPYCVQNW Trigger: CCAATTCTGGACACAATAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAAAGAGGAGCAGAGTGGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS CAA 72 bp | TGTCCAGAATTGGTTCCTTCCGGTGGATTCGTGGTCTaGCTGACTTCAAGAATGGAGCTGCGGACTTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CPELVPSGGFVV*LTSRMELRTFA Trigger: GGCAAAAGTCCGCAGCTCCATTCTTGAAGTCAGCAAGACCACGAATCCACCGGAAGGAACCAATTCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS CCA 72 bp | TTCGGCAGCTCTCTTCATTTCCATCTTATTACAGGCTaGACCAGGACTCATCTCCTGTCCATGGCATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FGSSLHFHLITG*TRTHLLSMASF Trigger: GAAGGATGCCATGGACAGGAGATGAGTCCTGGTCCAGCCTGTAATAAGATGGAAATGAAGAGAGCTGCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS CAA 72 bp | TTCCTGGTGTCTCCTTTGCCTGATCATAAGCCCCTATaGTGTCCAGAATTGGTTCCTTCCGGTGGATTCGTG | + |
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Preference number: 6 (lower is better) Translates to: FLVSPLPDHKPL*CPELVPSGGFV Trigger: CACGAATCCACCGGAAGGAACCAATTCTGGACACAATAGGGGCTTATGATCAGGCAAAGGAGACACCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS TCA 72 bp | AGCCACTTCATGAAGATCACAAGACATACGGGTCTTTaGTCTGCTATTGCTGAACGTGGCCTGCTCACTAAG | + |
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Preference number: 6 (lower is better) Translates to: SHFMKITRHTGL*SAIAERGLLTK Trigger: CTTAGTGAGCAGGCCACGTTCAGCAATAGCAGATCAAAGACCCGTATGTCTTGTGATCTTCATGAAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS TCA 72 bp | ATGGGATCAGAATCTCTGGCCTTGCCAGCCACTTCATaGAGATCACAAGACATACGGGTCTTTGATCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: MGSESLALPATS*RSQDIRVFDLL Trigger: TAGCAGATCAAAGACCCGTATGTCTTGTGATCTTCATGAAGTGGCTGGCAAGGCCAGAGATTCTGATCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS TCA 72 bp | CCTGATCATAAGCCCCTTTTTCTATCTTCCTGCAGATaGAGGTCTCCGATGTTACCCACAATGAGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PDHKPLFLSSCR*RSPMLPTMSSR Trigger: CCTGCTACTCATTGTGGGTAACATCGGAGACCTTCATCTGCAGGAAGATAGAAAAAGGGGCTTATGATCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436671.2 |
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| CDS CAA 90 bp | CTTAAAGATGGGCCGGACACAAACAGTGAGCAGCAGCAAGATTTATaGCGAAGAATGAAAGACCAAAACTTCCACAATGTGGAAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LKDGPDTNSEQQQDL*RRMKDQNFHNVEGD Trigger: GTCTCCTTCCACATTGTGGAAGTTTTGGTCTTTCATTCTTCGCAATAAATCTTGCTGCTGCTCACTGTTTGTGTCCGGCCCATCTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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| CDS TCA 72 bp | CAAACAGTGAGCAGCAGCAAGATTTATTGCGAAGAATaGAAGACCAAAACTTCCACAATGTGGAAGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: QTVSSSKIYCEE*KTKTSTMWKET Trigger: GGTCTCCTTCCACATTGTGGAAGTTTTGGTCTTTCATTCTTCGCAATAAATCTTGCTGCTGCTCACTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659218.1 |
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