Pregenerated sensors for LINC01507 (Homo sapiens)

Ensembl gene IDs: ENSG00000230945

Ensembl transcript IDs: ENST00000417801.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGCTGCCTCTCCAACCTCTTCAGCTCCAGCACGTATCTCCTGCTGTaGCTCACTCAAGATACCAGTATCCCAGCCAGAAGCTCTGGTTTG	+
Preference number: 5 (lower is better) Translates to: CCLSNLFSSSTYLLL*LTQDTSIPARSSGL Trigger: CAAACCAGAGCTTCTGGCTGGGATACTGGTATCTTGAGTGAGTCACAGCAGGAGATACGTGCTGGAGCTGAAGAGGTTGGAGAGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417801.1
CDS GCA 90 bp	TTTTCTGCTGCCTCTCCAACCTCTTCAGCTCCAGCACGTATCTCCTaGTGTGACTCACTCAAGATACCAGTATCCCAGCCAGAAGCTCTG	+
Preference number: 5 (lower is better) Translates to: FSAASPTSSAPARIS*CDSLKIPVSQPEAL Trigger: CAGAGCTTCTGGCTGGGATACTGGTATCTTGAGTGAGTCACAGCAGGAGATACGTGCTGGAGCTGAAGAGGTTGGAGAGGCAGCAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417801.1
CDS GCA 72 bp	GCCTCTCCAACCTCTTCAGCTCCAGCACGTATCTCCTaGTGTGACTCACTCAAGATACCAGTATCCCAGCCA	+
Preference number: 6 (lower is better) Translates to: ASPTSSAPARIS*CDSLKIPVSQP Trigger: TGGCTGGGATACTGGTATCTTGAGTGAGTCACAGCAGGAGATACGTGCTGGAGCTGAAGAGGTTGGAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417801.1
CDS TCA 72 bp	TCCAACCTCTTCAGCTCCAGCACGTATCTCCTGCTGTaGCTCACTCAAGATACCAGTATCCCAGCCAGAAGC	+
Preference number: 6 (lower is better) Translates to: SNLFSSSTYLLL*LTQDTSIPARS Trigger: GCTTCTGGCTGGGATACTGGTATCTTGAGTGAGTCACAGCAGGAGATACGTGCTGGAGCTGAAGAGGTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417801.1
CDS TCA 72 bp	AGAGTGTTGCAAGGTAAAACAATCTCAGGGTATCATTaGAGCATTTCTGTGTTGAGCACCAGGGATCAGGGT	+
Preference number: 6 (lower is better) Translates to: RVLQGKTISGYH*SISVLSTRDQG Trigger: ACCCTGATCCCTGGTGCTCAACACAGAAATGCTTCAATGATACCCTGAGATTGTTTTACCTTGCAACACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417801.1
CDS GCA 72 bp	ATCGCATTCCTGGAGCAGCAATTTTCCAGAGAGTGTTaGAAGGTAAAACAATCTCAGGGTATCATTGAAGCA	+
Preference number: 6 (lower is better) Translates to: IAFLEQQFSREC*KVKQSQGIIEA Trigger: TGCTTCAATGATACCCTGAGATTGTTTTACCTTGCAACACTCTCTGGAAAATTGCTGCTCCAGGAATGCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417801.1

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