Pregenerated sensors for LINC01504 (Homo sapiens)
Ensembl gene IDs: ENSG00000225434Ensembl transcript IDs: ENST00000436054.1, ENST00000451152.1, ENST00000451596.2, ENST00000653572.1, ENST00000657951.1, ENST00000659727.1, ENST00000665957.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGGCCACGCTGAATGAAACTTGCTGTCACACTGCCAGCTTTTCTTaGCAGTCTGGCCTTGGAGAGGCTCGCTGGGGGCTCTGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PATLNETCCHTASFS*QSGLGEARWGLWQL Trigger: CAACTGCCAGAGCCCCCAGCGAGCCTCTCCAAGGCCAGACTGCCAAGAAAAGCTGGCAGTGTGACAGCAAGTTTCATTCAGCGTGGCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS TCA 90 bp | TCTTCAGAGGCAGACCCTATGCTTAGAATAAGGGTGGGTCAGGCGTaGGCTGGCCAGCACTGTTTCCGGCTGGGTCTCTGCAGCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSEADPMLRIRVGQA*AGQHCFRLGLCSIS Trigger: GGAAATGCTGCAGAGACCCAGCCGGAAACAGTGCTGGCCAGCTCACGCCTGACCCACCCTTATTCTAAGCATAGGGTCTGCCTCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000451596.2 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS TCA 90 bp | CATCCTCCTCATGGTCGCTCCTCAGTGACCACCGGCCACGCTGAATaGAACTTGCTGTCACACTGCCAGCTTTTCTTGGCAGTCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HPPHGRSSVTTGHAE*NLLSHCQLFLAVWP Trigger: AGGCCAGACTGCCAAGAAAAGCTGGCAGTGTGACAGCAAGTTTCATTCAGCGTGGCCGGTGGTCACTGAGGAGCGACCATGAGGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS TCA 90 bp | TGGCCATCCTCCTCATGGTCGCTCCTCAGTGACCACCGGCCACGCTaGATGAAACTTGCTGTCACACTGCCAGCTTTTCTTGGCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: WPSSSWSLLSDHRPR*MKLAVTLPAFLGSL Trigger: CAGACTGCCAAGAAAAGCTGGCAGTGTGACAGCAAGTTTCATTCAGCGTGGCCGGTGGTCACTGAGGAGCGACCATGAGGAGGATGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CCA 90 bp | ACAGTGAGAAGATGGCCCTCACCAAACCCCAAATCTTCTGAGGCCTaGATCTTGAACTTCCCAGCCCCATGTTGCCCAGGCTGGTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: TVRRWPSPNPKSSEA*ILNFPAPCCPGWSR Trigger: TCGAGACCAGCCTGGGCAACATGGGGCTGGGAAGTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657951.1 ENST00000665957.1 |
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| CDS TCA 90 bp | GGTTCCAGAGAGCTGCCTTACCTCTTCCACCATGTAAGGCTACAGTaGGAAGATGGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GSRELPYLFHHVRLQ*EDGPHQTPNLLRPG Trigger: TCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGGTAAGGCAGCTCTCTGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS GCA 90 bp | GGGAACAGCTGTACCAGGCTCCTGAACTACTTGGCACAGCACTTGTaGATGTCTCAAGCCTGTTCCTTAGGAGCCGTGCCTTTATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GNSCTRLLNYLAQHL*MSQACSLGAVPLCE Trigger: CTCACATAAAGGCACGGCTCCTAAGGAACAGGCTTGAGACATGCACAAGTGCTGTGCCAAGTAGTTCAGGAGCCTGGTACAGCTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 90 bp | CTTGTGCATGTCTCAAGCCTGTTCCTTAGGAGCCGTGCCTTTATGTaGGCTGGAGCAACACGCAGTGATTGTCCTCAAAAGCTGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LVHVSSLFLRSRAFM*AGATRSDCPQKLVL Trigger: GAGGACCAGCTTTTGAGGACAATCACTGCGTGTTGCTCCAGCTCACATAAAGGCACGGCTCCTAAGGAACAGGCTTGAGACATGCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 90 bp | AGAGCTGCCTTACCTCTTCCACCATGTAAGGCTACAGTGAGAAGATaGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGGATCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: RAALPLPPCKATVRR*PSPNPKSSEAWILN Trigger: GTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGGTAAGGCAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS CCA 90 bp | CCAGTTGTTGTGGCTCTTCCACCATGTAAGGCTACAGTGAGAAGATaGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGGATCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: PVVVALPPCKATVRR*PSPNPKSSEAWILN Trigger: GTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGCCACAACAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS TCA 90 bp | ATCCCAAGAGATATGGCACAGAGACGTTTAGAGAAGTGTGCCACATaGTCTTCTCAGGAACATGGGAAAGGCACCAGGACCAGAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IPRDMAQRRLEKCAT*SSQEHGKGTRTRVR Trigger: CCTCACTCTGGTCCTGGTGCCTTTCCCATGTTCCTGAGAAGATCATGTGGCACACTTCTCTAAACGTCTCTGTGCCATATCTCTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS TCA 90 bp | AAGAGAATCCAGTTGTTGTGGCTCTTCCACCATGTAAGGCTACAGTaGGAAGATGGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: KRIQLLWLFHHVRLQ*EDGPHQTPNLLRPG Trigger: TCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGCCACAACAACTGGATTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 90 bp | TCAGTTTCTTCATCTTTTGAAGGCATGACTTCTCCTCGGCTTCCCTaGAAGGTTGGTTTTGTCCTCCAGCGTCCCGCAGCTCTGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: SVSSSFEGMTSPRLP*KVGFVLQRPAALDL Trigger: TAAATCCAGAGCTGCGGGACGCTGGAGGACAAAACCAACCTTCCAGGGAAGCCGAGGAGAAGTCATGCCTTCAAAAGATGAAGAAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436054.1 |
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| CDS TCA 90 bp | TTTGTTTACACGTTGATCAGCAGGTGGTGGCTGAATGTTCCCCTTTaGTTTCTGTGGCTCAGGAGCAGCGGGCTAAGACATGAGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: FVYTLISRWWLNVPL*FLWLRSSGLRHELN Trigger: ATTCAGCTCATGTCTTAGCCCGCTGCTCCTGAGCCACAGAAATCAAAGGGGAACATTCAGCCACCACCTGCTGATCAACGTGTAAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 90 bp | ACTTCTCCAGATGTCAGTTTCTTCATCTCTGTCACTGGTGCTATGTaGGCTTGGGTGACAACTCGAATCTCTCTGTGCCCTCGTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TSPDVSFFISVTGAM*AWVTTRISLCPRSF Trigger: GAAGGAACGAGGGCACAGAGAGATTCGAGTTGTCACCCAAGCTCACATAGCACCAGTGACAGAGATGAAGAAACTGACATCTGGAGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS GCA 90 bp | CCTTTTGATCCCAAGAGATATGGCACAGAGACGTTTAGAGAAGTGTaGCACATGATCTTCTCAGGAACATGGGAAAGGCACCAGGACCAG | + |
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Preference number: 5 (lower is better) Translates to: PFDPKRYGTETFREV*HMIFSGTWERHQDQ Trigger: CTGGTCCTGGTGCCTTTCCCATGTTCCTGAGAAGATCATGTGGCACACTTCTCTAAACGTCTCTGTGCCATATCTCTTGGGATCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CCA 90 bp | ACCGTGGTTGTTTCTGCCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACT | + |
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Preference number: 5 (lower is better) Translates to: TVVVSAHSKLSMGGG*PLPTVLAGQANKST Trigger: AGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGGCAGAAACAACCACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000436054.1 ENST00000451152.1 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS CCA 90 bp | TGCCCTCGTTCCTTCATCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACT | + |
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Preference number: 5 (lower is better) Translates to: CPRSFIHSKLSMGGG*PLPTVLAGQANKST Trigger: AGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGATGAAGGAACGAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 90 bp | GGTAACCGTGGTTGTTTCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACT | + |
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Preference number: 5 (lower is better) Translates to: GNRGCFHSKLSMGGG*PLPTVLAGQANKST Trigger: AGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGAAACAACCACGGTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451596.2 |
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| CDS CCA 90 bp | AGTTTCTTCTGGGAGCAAGGGCACTATGTCATCCACACCCTATTGTaGTTAGAAGAGGCAACAGGAGGTAAAGGCATATTGGGAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: SFFWEQGHYVIHTLL*LEEATGGKGILGTA Trigger: AGCTGTTCCCAATATGCCTTTACCTCCTGTTGCCTCTTCTAACCACAATAGGGTGTGGATGACATAGTGCCCTTGCTCCCAGAAGAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 90 bp | CTGGGAGAAATTAGCTGGCAGATAGCCCATTTTGTTTTCTCCACGTaGTTTGGCTTACCAAACACTTCGCTATTGCCCTTGCAAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LGEISWQIAHFVFST*FGLPNTSLLPLQGK Trigger: CTTTCCTTGCAAGGGCAATAGCGAAGTGTTTGGTAAGCCAAACCACGTGGAGAAAACAAAATGGGCTATCTGCCAGCTAATTTCTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 90 bp | AATTACTTCAACTTCTCCAGATGTCAGTTTCTTCATCTCTGTCACTaGTGCTATGTGAGCTTGGGTGACAACTCGAATCTCTCTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: NYFNFSRCQFLHLCH*CYVSLGDNSNLSVP Trigger: GGGCACAGAGAGATTCGAGTTGTCACCCAAGCTCACATAGCACCAGTGACAGAGATGAAGAAACTGACATCTGGAGAAGTTGAAGTAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 90 bp | CTCTGGCAGTTGCTCTTGTTTATTACAAAGTCTTGCTCCACTCCCTaGCGACAGCTTGCAAACCAAAACTATTTCATTTCCCAGTTACAA | + |
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Preference number: 5 (lower is better) Translates to: LWQLLLFITKSCSTP*RQLANQNYFISQLQ Trigger: TTGTAACTGGGAAATGAAATAGTTTTGGTTTGCAAGCTGTCGCCAGGGAGTGGAGCAAGACTTTGTAATAAACAAGAGCAACTGCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CCA 90 bp | GGGCCATCTGAGCATACATTAAGAAATGCAGAAGAATTATTGGAATaGCCTTTTGATCCCAAGAGATATGGCACAGAGACGTTTAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: GPSEHTLRNAEELLE*PFDPKRYGTETFRE Trigger: TTCTCTAAACGTCTCTGTGCCATATCTCTTGGGATCAAAAGGCCATTCCAATAATTCTTCTGCATTTCTTAATGTATGCTCAGATGGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CCA 90 bp | CAAGGAAATCAGACAGCTCCCAGCATACCCATTGTCAGAGTTCCCTaGCACAACTTCAGAATTGTATTCAAAAGTATTTTCACAACAGTA | + |
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Preference number: 5 (lower is better) Translates to: QGNQTAPSIPIVRVP*HNFRIVFKSIFTTV Trigger: TACTGTTGTGAAAATACTTTTGAATACAATTCTGAAGTTGTGCCAGGGAACTCTGACAATGGGTATGCTGGGAGCTGTCTGATTTCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS TCA 90 bp | GGTTGCTATAGTCTCAATGCTGGTGACTCCCACAAATTCATATGTTaGAATCTGATTGTCAAAGTGATGGTGTTAGGAGGTAGAGAATTT | + |
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Preference number: 5 (lower is better) Translates to: GCYSLNAGDSHKFIC*NLIVKVMVLGGREF Trigger: AAATTCTCTACCTCCTAACACCATCACTTTGACAATCAGATTTCAACATATGAATTTGTGGGAGTCACCAGCATTGAGACTATAGCAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS TCA 72 bp | CCCCCTCTGGCCATCCTCCTCATGGTCGCTCCTCAGTaGCCACCGGCCACGCTGAATGAAACTTGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PPLAILLMVAPQ*PPATLNETCCH Trigger: GTGACAGCAAGTTTCATTCAGCGTGGCCGGTGGTCACTGAGGAGCGACCATGAGGAGGATGGCCAGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS TCA 72 bp | GCAGACCCTATGCTTAGAATAAGGGTGGGTCAGGCGTaGGCTGGCCAGCACTGTTTCCGGCTGGGTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ADPMLRIRVGQA*AGQHCFRLGLC Trigger: GCAGAGACCCAGCCGGAAACAGTGCTGGCCAGCTCACGCCTGACCCACCCTTATTCTAAGCATAGGGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000436054.1 ENST00000451596.2 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS CAA 90 bp | CAGTCTGGCCTTGGAGAGGCTCGCTGGGGGCTCTGGCAGTTGCTCTaGTTTATTACAAAGTCTTGCTCCACTCCCTGGCGACAGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QSGLGEARWGLWQLL*FITKSCSTPWRQLA Trigger: TGCAAGCTGTCGCCAGGGAGTGGAGCAAGACTTTGTAATAAACAAGAGCAACTGCCAGAGCCCCCAGCGAGCCTCTCCAAGGCCAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CAA 90 bp | TCTTGGCAGTCTGGCCTTGGAGAGGCTCGCTGGGGGCTCTGGCAGTaGCTCTTGTTTATTACAAAGTCTTGCTCCACTCCCTGGCGACAG | + |
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Preference number: 6 (lower is better) Translates to: SWQSGLGEARWGLWQ*LLFITKSCSTPWRQ Trigger: CTGTCGCCAGGGAGTGGAGCAAGACTTTGTAATAAACAAGAGCAACTGCCAGAGCCCCCAGCGAGCCTCTCCAAGGCCAGACTGCCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CCA 72 bp | CTGAATGAAACTTGCTGTCACACTGCCAGCTTTTCTTaGCAGTCTGGCCTTGGAGAGGCTCGCTGGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LNETCCHTASFS*QSGLGEARWGL Trigger: GAGCCCCCAGCGAGCCTCTCCAAGGCCAGACTGCCAAGAAAAGCTGGCAGTGTGACAGCAAGTTTCATTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CCA 72 bp | CCGTCTTTTGAAGGCATGACTTCTCCTCGGCTTCCCTaGAAGGTTGGTTTTGTCCTCCAGCGTCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSFEGMTSPRLP*KVGFVLQRPAA Trigger: AGCTGCGGGACGCTGGAGGACAAAACCAACCTTCCAGGGAAGCCGAGGAGAAGTCATGCCTTCAAAAGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665957.1 |
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| CDS CCA 72 bp | AGATGGCCCTCACCAAACCCCAAATCTTCTGAGGCCTaGATCTTGAACTTCCCAGCCCCATGTTGCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RWPSPNPKSSEA*ILNFPAPCCPG Trigger: GCCTGGGCAACATGGGGCTGGGAAGTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657951.1 ENST00000665957.1 |
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| CDS CAA 72 bp | CCCTCACCAAACCCCAAATCTTCTGAGGCCTGGATCTaGAACTTCCCAGCCCCATGTTGCCCAGGCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PSPNPKSSEAWI*NFPAPCCPGWS Trigger: AGACCAGCCTGGGCAACATGGGGCTGGGAAGTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657951.1 ENST00000665957.1 |
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| CDS TCA 72 bp | AGTGAGAAGATGGCCCTCACCAAACCCCAAATCTTCTaGGGCCTGGATCTTGAACTTCCCAGCCCCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SEKMALTKPQIF*GLDLELPSPWE Trigger: CTCCCAGGGGCTGGGAAGTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436054.1 |
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| CDS CCA 72 bp | ACACCTTTTGAAGGCATGACTTCTCCTCGGCTTCCCTaGAAGGTTGGTTTTGTCCTCCAGCGTCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TPFEGMTSPRLP*KVGFVLQRPAA Trigger: AGCTGCGGGACGCTGGAGGACAAAACCAACCTTCCAGGGAAGCCGAGGAGAAGTCATGCCTTCAAAAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS TCA 72 bp | TCCTCATGGTCGCTCCTCAGTGACCACCGGCCACGCTaGATGAAACTTGCTGTCACACTGCCAGCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSWSLLSDHRPR*MKLAVTLPAFL Trigger: AAGAAAAGCTGGCAGTGTGACAGCAAGTTTCATTCAGCGTGGCCGGTGGTCACTGAGGAGCGACCATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS GCA 72 bp | TGTACCAGGCTCCTGAACTACTTGGCACAGCACTTGTaGATGTCTCAAGCCTGTTCCTTAGGAGCCGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CTRLLNYLAQHL*MSQACSLGAVP Trigger: AGGCACGGCTCCTAAGGAACAGGCTTGAGACATGCACAAGTGCTGTGCCAAGTAGTTCAGGAGCCTGGTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 72 bp | TCATCTTTTGAAGGCATGACTTCTCCTCGGCTTCCCTaGAAGGTTGGTTTTGTCCTCCAGCGTCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSFEGMTSPRLP*KVGFVLQRPAA Trigger: AGCTGCGGGACGCTGGAGGACAAAACCAACCTTCCAGGGAAGCCGAGGAGAAGTCATGCCTTCAAAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436054.1 |
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| CDS CCA 72 bp | GTGGCTCTTCCACCATGTAAGGCTACAGTGAGAAGATaGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VALPPCKATVRR*PSPNPKSSEAW Trigger: CCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 72 bp | AGCTGTACCAGGCTCCTGAACTACTTGGCACAGCACTaGTGCATGTCTCAAGCCTGTTCCTTAGGAGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SCTRLLNYLAQH*CMSQACSLGAV Trigger: CACGGCTCCTAAGGAACAGGCTTGAGACATGCACAAGTGCTGTGCCAAGTAGTTCAGGAGCCTGGTACAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 72 bp | AGTGAGAAGATGGCCCTCACCAAACCCCAAATCTTCTaGGGCCTGGATCTTGAACTTCCCAGCCCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SEKMALTKPQIF*GLDLELPSPML Trigger: CAACATGGGGCTGGGAAGTTCAAGATCCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657951.1 ENST00000665957.1 |
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| CDS CAA 90 bp | ATTGGGAACAGCTGTACCAGGCTCCTGAACTACTTGGCACAGCACTaGTGCATGTCTCAAGCCTGTTCCTTAGGAGCCGTGCCTTTATGT | + |
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Preference number: 6 (lower is better) Translates to: IGNSCTRLLNYLAQH*CMSQACSLGAVPLC Trigger: ACATAAAGGCACGGCTCCTAAGGAACAGGCTTGAGACATGCACAAGTGCTGTGCCAAGTAGTTCAGGAGCCTGGTACAGCTGTTCCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 72 bp | GTCTCAAGCCTGTTCCTTAGGAGCCGTGCCTTTATGTaGGCTGGAGCAACACGCAGTGATTGTCCTCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSLFLRSRAFM*AGATRSDCPQK Trigger: CTTTTGAGGACAATCACTGCGTGTTGCTCCAGCTCACATAAAGGCACGGCTCCTAAGGAACAGGCTTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 72 bp | TTACCTCTTCCACCATGTAAGGCTACAGTGAGAAGATaGCCCTCACCAAACCCCAAATCTTCTGAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPLPPCKATVRR*PSPNPKSSEAW Trigger: CCAGGCCTCAGAAGATTTGGGGTTTGGTGAGGGCCATCTTCTCACTGTAGCCTTACATGGTGGAAGAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS CAA 72 bp | CATATTGGGAACAGCTGTACCAGGCTCCTGAACTACTaGGCACAGCACTTGTGCATGTCTCAAGCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HIGNSCTRLLNY*AQHLCMSQACS Trigger: GGAACAGGCTTGAGACATGCACAAGTGCTGTGCCAAGTAGTTCAGGAGCCTGGTACAGCTGTTCCCAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 72 bp | GATATGGCACAGAGACGTTTAGAGAAGTGTGCCACATaGTCTTCTCAGGAACATGGGAAAGGCACCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: DMAQRRLEKCAT*SSQEHGKGTRT Trigger: GGTCCTGGTGCCTTTCCCATGTTCCTGAGAAGATCATGTGGCACACTTCTCTAAACGTCTCTGTGCCATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS TCA 72 bp | TCTTCATCTCTGTCACTGGTGCTATGTGAGCTTGGGTaGCAACTCGAATCTCTCTGTGCCCTCGTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSLSLVLCELG*QLESLCALVPS Trigger: TGAAGGAACGAGGGCACAGAGAGATTCGAGTTGTCACCCAAGCTCACATAGCACCAGTGACAGAGATGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 72 bp | GTTTCTGCCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VSAHSKLSMGGG*PLPTVLAGQAN Trigger: ATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGGCAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000436054.1 ENST00000451152.1 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS CCA 72 bp | GAGCTGGAGCAACACGCAGTGATTGTCCTCAAAAGCTaGTCCTCCTCAGTCTTGACTACCCCTTTGTTTACA | + |
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Preference number: 6 (lower is better) Translates to: ELEQHAVIVLKS*SSSVLTTPLFT Trigger: TGTAAACAAAGGGGTAGTCAAGACTGAGGAGGACCAGCTTTTGAGGACAATCACTGCGTGTTGCTCCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CAA 72 bp | GCCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AHSKLSMGGGWP*PTVLAGQANKS Trigger: GCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000436054.1 ENST00000451152.1 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS CAA 90 bp | CCCAGTTTCTTCTGGGAGCAAGGGCACTATGTCATCCACACCCTATaGTGGTTAGAAGAGGCAACAGGAGGTAAAGGCATATTGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: PSFFWEQGHYVIHTL*WLEEATGGKGILGT Trigger: TGTTCCCAATATGCCTTTACCTCCTGTTGCCTCTTCTAACCACAATAGGGTGTGGATGACATAGTGCCCTTGCTCCCAGAAGAAACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CAA 90 bp | TCCAGATGTCAGTTTCTTCATCTCTGTCACTGGTGCTATGTGAGCTaGGGTGACAACTCGAATCTCTCTGTGCCCTCGTTCCTTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SRCQFLHLCHWCYVS*GDNSNLSVPSFLHP Trigger: TGGATGAAGGAACGAGGGCACAGAGAGATTCGAGTTGTCACCCAAGCTCACATAGCACCAGTGACAGAGATGAAGAAACTGACATCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS GCA 72 bp | CCCAAGAGATATGGCACAGAGACGTTTAGAGAAGTGTaGCACATGATCTTCTCAGGAACATGGGAAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PKRYGTETFREV*HMIFSGTWERH Trigger: GTGCCTTTCCCATGTTCCTGAGAAGATCATGTGGCACACTTCTCTAAACGTCTCTGTGCCATATCTCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CCA 72 bp | GGTTGTTTCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GCFHSKLSMGGG*PLPTVLAGQAN Trigger: ATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGAAACAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451596.2 |
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| CDS CCA 72 bp | TGGGAGCAAGGGCACTATGTCATCCACACCCTATTGTaGTTAGAAGAGGCAACAGGAGGTAAAGGCATATTG | + |
|
Preference number: 6 (lower is better) Translates to: WEQGHYVIHTLL*LEEATGGKGIL Trigger: CAATATGCCTTTACCTCCTGTTGCCTCTTCTAACCACAATAGGGTGTGGATGACATAGTGCCCTTGCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 72 bp | TCCTTCATCCACTCTAAACTGTCAATGGGAGGAGGATaGCCTTTGCCTACGGTCTTAGCAGGACAAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SFIHSKLSMGGG*PLPTVLAGQAN Trigger: ATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGATGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 72 bp | TTCTGGGAGCAAGGGCACTATGTCATCCACACCCTATaGTGGTTAGAAGAGGCAACAGGAGGTAAAGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: FWEQGHYVIHTL*WLEEATGGKGI Trigger: TATGCCTTTACCTCCTGTTGCCTCTTCTAACCACAATAGGGTGTGGATGACATAGTGCCCTTGCTCCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CAA 90 bp | TCTCAGGAACATGGGAAAGGCACCAGGACCAGAGTGAGGCAGAGGTaGACATTAACTGAAGTTTGGACACCTTTGAGTAACTGTATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQEHGKGTRTRVRQR*TLTEVWTPLSNCIS Trigger: TGAGATACAGTTACTCAAAGGTGTCCAAACTTCAGTTAATGTCAACCTCTGCCTCACTCTGGTCCTGGTGCCTTTCCCATGTTCCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 72 bp | TTCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FHSKLSMGGGWP*PTVLAGQANKS Trigger: GCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451596.2 |
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| CDS CAA 72 bp | TTTTGCAGAAGACCTAAGTGTGTGCTAATTCTGAGTTaGGCTTCTGCTGTAAGGGTCGTGGGCTCTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FCRRPKCVLILS*ASAVRVVGSWE Trigger: TTCCCAAGAGCCCACGACCCTTACAGCAGAAGCCAAACTCAGAATTAGCACACACTTAGGTCTTCTGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CAA 72 bp | ATCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IHSKLSMGGGWP*PTVLAGQANKS Trigger: GCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 90 bp | TTGGTGTTCTTTTGCAGAAGACCTAAGTGTGTGCTAATTCTGAGTTaGGCTTCTGCTGTAAGGGTCGTGGGCTCTTGGGAATTTGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LVFFCRRPKCVLILS*ASAVRVVGSWEFGE Trigger: TTCACCAAATTCCCAAGAGCCCACGACCCTTACAGCAGAAGCCAAACTCAGAATTAGCACACACTTAGGTCTTCTGCAAAAGAACACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS TCA 72 bp | TTCTCCAGATGTCAGTTTCTTCATCTTTTGAAGGCATaGCTTCTCCTCGGCTTCCCTGGAAGGTTGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSRCQFLHLLKA*LLLGFPGRLVL Trigger: CAAAACCAACCTTCCAGGGAAGCCGAGGAGAAGTCATGCCTTCAAAAGATGAAGAAACTGACATCTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436054.1 |
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| CDS CCA 72 bp | AACTTCTCCAGATGTCAGTTTCTTCATCTCTGTCACTaGTGCTATGTGAGCTTGGGTGACAACTCGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: NFSRCQFLHLCH*CYVSLGDNSNL Trigger: GAGATTCGAGTTGTCACCCAAGCTCACATAGCACCAGTGACAGAGATGAAGAAACTGACATCTGGAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 72 bp | ATTAGCTGGCAGATAGCCCATTTTGTTTTCTCCACGTaGTTTGGCTTACCAAACACTTCGCTATTGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISWQIAHFVFST*FGLPNTSLLPL Trigger: CAAGGGCAATAGCGAAGTGTTTGGTAAGCCAAACCACGTGGAGAAAACAAAATGGGCTATCTGCCAGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 72 bp | AGTGAGATTACCTGTTTTGCAATAACAGGTCATTGGTaGCAACCCAAGATGGTGGAGTTAGGGGATCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SEITCFAITGHW*QPKMVELGDLG Trigger: CCCTAGATCCCCTAACTCCACCATCTTGGGTTGCAACCAATGACCTGTTATTGCAAAACAGGTAATCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS CAA 90 bp | GTTGTTTCTGCCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACTAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VVSAHSKLSMGGGWP*PTVLAGQANKSTNF Trigger: AAAATTAGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGGCAGAAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000436054.1 ENST00000451152.1 ENST00000653572.1 ENST00000659727.1 ENST00000665957.1 |
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| CDS CAA 90 bp | CGTGGTTGTTTCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACTAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RGCFHSKLSMGGGWP*PTVLAGQANKSTNF Trigger: AAAATTAGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGAAACAACCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451596.2 |
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| CDS CAA 90 bp | CGTTCCTTCATCCACTCTAAACTGTCAATGGGAGGAGGATGGCCTTaGCCTACGGTCTTAGCAGGACAAGCAAATAAAAGCACTAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSFIHSKLSMGGGWP*PTVLAGQANKSTNF Trigger: AAAATTAGTGCTTTTATTTGCTTGTCCTGCTAAGACCGTAGGCAAAGGCCATCCTCCTCCCATTGACAGTTTAGAGTGGATGAAGGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 72 bp | AACTGGTTAATGAGTTGTAACTTTCCCAGTTTCTTCTaGGAGCAAGGGCACTATGTCATCCACACCCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: NWLMSCNFPSFF*EQGHYVIHTLL Trigger: CAATAGGGTGTGGATGACATAGTGCCCTTGCTCCCAGAAGAAACTGGGAAAGTTACAACTCATTAACCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659727.1 |
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| CDS CCA 72 bp | CTAAGTGAGATTACCTGTTTTGCAATAACAGGTCATTaGTTGCAACCCAAGATGGTGGAGTTAGGGGATCTA | + |
|
Preference number: 6 (lower is better) Translates to: LSEITCFAITGH*LQPKMVELGDL Trigger: TAGATCCCCTAACTCCACCATCTTGGGTTGCAACCAATGACCTGTTATTGCAAAACAGGTAATCTCACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS CAA 72 bp | TTCTCCACGTGGTTTGGCTTACCAAACACTTCGCTATaGCCCTTGCAAGGAAAGACTGAACATAGTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSTWFGLPNTSL*PLQGKTEHSYL Trigger: CAAATAACTATGTTCAGTCTTTCCTTGCAAGGGCAATAGCGAAGTGTTTGGTAAGCCAAACCACGTGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CCA 72 bp | TTGCTCTTGTTTATTACAAAGTCTTGCTCCACTCCCTaGCGACAGCTTGCAAACCAAAACTATTTCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLFITKSCSTP*RQLANQNYFIS Trigger: GGAAATGAAATAGTTTTGGTTTGCAAGCTGTCGCCAGGGAGTGGAGCAAGACTTTGTAATAAACAAGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CAA 90 bp | AAACCAGGGCCATCTGAGCATACATTAAGAAATGCAGAAGAATTATaGGAATGGCCTTTTGATCCCAAGAGATATGGCACAGAGACGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KPGPSEHTLRNAEEL*EWPFDPKRYGTETF Trigger: AAACGTCTCTGTGCCATATCTCTTGGGATCAAAAGGCCATTCCAATAATTCTTCTGCATTTCTTAATGTATGCTCAGATGGCCCTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 90 bp | AAGGCAGTGGGAATAAAGAATTCTTTTTCTACTGCATTGTATGAGTaGTCTAGGACAAGGAAATCAGACAGCTCCCAGCATACCCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: KAVGIKNSFSTALYE*SRTRKSDSSQHTHC Trigger: ACAATGGGTATGCTGGGAGCTGTCTGATTTCCTTGTCCTAGACAACTCATACAATGCAGTAGAAAAAGAATTCTTTATTCCCACTGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 90 bp | TGCTCTTGTTTATTACAAAGTCTTGCTCCACTCCCTGGCGACAGCTaGCAAACCAAAACTATTTCATTTCCCAGTTACAAACAGGTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSCLLQSLAPLPGDS*QTKTISFPSYKQVR Trigger: TCTAACCTGTTTGTAACTGGGAAATGAAATAGTTTTGGTTTGCAAGCTGTCGCCAGGGAGTGGAGCAAGACTTTGTAATAAACAAGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451152.1 ENST00000451596.2 ENST00000659727.1 |
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| CDS CAA 90 bp | GTTTTCTCCACGTGGTTTGGCTTACCAAACACTTCGCTATTGCCCTaGCAAGGAAAGACTGAACATAGTTATTTGAATTTCTCACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: VFSTWFGLPNTSLLP*QGKTEHSYLNFSPC Trigger: ACATGGTGAGAAATTCAAATAACTATGTTCAGTCTTTCCTTGCAAGGGCAATAGCGAAGTGTTTGGTAAGCCAAACCACGTGGAGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 90 bp | CCTATGGAAGAGAAAGGGCTACTGATGTTAAACTCTACAAATGAGTaGAAAACCATTGAAATGAACTCTGGAAGTCAAGCCCCTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: PMEEKGLLMLNSTNE*KTIEMNSGSQAPLI Trigger: AATCAGAGGGGCTTGACTTCCAGAGTTCATTTCAATGGTTTTCAACTCATTTGTAGAGTTTAACATCAGTAGCCCTTTCTCTTCCATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000436054.1 ENST00000653572.1 ENST00000665957.1 |
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| CDS CAA 72 bp | CTCCTTCAAATCTCAGACCTTGATGGTTGTTTTCACTaGAGGAAGCATTACTTAAGATATGGTAGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQISDLDGCFH*RKHYLRYGRTV Trigger: CACAGTCCTACCATATCTTAAGTAATGCTTCCTCAAGTGAAAACAACCATCAAGGTCTGAGATTTGAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 90 bp | CATTTTGTTTTCTCCACGTGGTTTGGCTTACCAAACACTTCGCTATaGCCCTTGCAAGGAAAGACTGAACATAGTTATTTGAATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HFVFSTWFGLPNTSL*PLQGKTEHSYLNFS Trigger: TGAGAAATTCAAATAACTATGTTCAGTCTTTCCTTGCAAGGGCAATAGCGAAGTGTTTGGTAAGCCAAACCACGTGGAGAAAACAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 72 bp | AAGGCAGTGGGAATAAAGAATTCTTTTTCTACTGCATaGTATGAGTTGTCTAGGACAAGGAAATCAGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAVGIKNSFSTA*YELSRTRKSDS Trigger: GCTGTCTGATTTCCTTGTCCTAGACAACTCATACAATGCAGTAGAAAAAGAATTCTTTATTCCCACTGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 90 bp | AGATCCCGGGCTCAAGTCTTTGTTTCAATCCTAATAGCTTTGTATTaGGGGGCAAGTTATTTAATGCTTTTATTTCCTCAACAGGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRAQVFVSILIALY*GASYLMLLFPQQES Trigger: ACTTTCCTGTTGAGGAAATAAAAGCATTAAATAACTTGCCCCCAAATACAAAGCTATTAGGATTGAAACAAAGACTTGAGCCCGGGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 90 bp | TTAGATAGATCCCGGGCTCAAGTCTTTGTTTCAATCCTAATAGCTTaGTATTTGGGGGCAAGTTATTTAATGCTTTTATTTCCTCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LDRSRAQVFVSILIA*YLGASYLMLLFPQQ Trigger: CTGTTGAGGAAATAAAAGCATTAAATAACTTGCCCCCAAATACAAAGCTATTAGGATTGAAACAAAGACTTGAGCCCGGGATCTATCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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| CDS CAA 90 bp | AACACTTCGCTATTGCCCTTGCAAGGAAAGACTGAACATAGTTATTaGAATTTCTCACCATGTCAAAGGAAGTTAAAAGTTCCTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NTSLLPLQGKTEHSY*NFSPCQRKLKVPFP Trigger: TGGAAAAGGAACTTTTAACTTCCTTTGACATGGTGAGAAATTCAAATAACTATGTTCAGTCTTTCCTTGCAAGGGCAATAGCGAAGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657951.1 |
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| CDS CAA 72 bp | TCCCGGGCTCAAGTCTTTGTTTCAATCCTAATAGCTTaGTATTTGGGGGCAAGTTATTTAATGCTTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: SRAQVFVSILIA*YLGASYLMLLF Trigger: AAATAAAAGCATTAAATAACTTGCCCCCAAATACAAAGCTATTAGGATTGAAACAAAGACTTGAGCCCGGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436054.1 ENST00000653572.1 |
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