Pregenerated sensors for LINC01503 (Homo sapiens)
Ensembl gene IDs: ENSG00000233901Ensembl transcript IDs: ENST00000423122.2, ENST00000427109.2, ENST00000436710.6, ENST00000444125.2, ENST00000654148.1, ENST00000654190.1, ENST00000654735.1, ENST00000657393.1, ENST00000657651.1, ENST00000657886.1, ENST00000659864.1, ENST00000660036.1, ENST00000660635.1, ENST00000661745.1, ENST00000665063.1, ENST00000666671.1, ENST00000667257.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCAGGAAGCGGGTGGGAGGAGGGTGGGCCGGGGGCTGGGGAATGCTaGAGGGAAGGAGGGAGCGGTGAGGACGGCCGCCACACGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGSGWEEGGPGAGEC*REGGSGEDGRHTSG Trigger: TCCTGACGTGTGGCGGCCGTCCTCACCGCTCCCTCCTTCCCTGCAGCATTCCCCAGCCCCCGGCCCACCCTCCTCCCACCCGCTTCCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654148.1 |
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| CDS CCA 90 bp | GGGAAGGAGGGAGCGGTGAGGACGGCCGCCACACGTCAGGAGGGCTaGCTTCTGGGGCCCAGCACCCGGCAAATCCTGACACGTAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: GKEGAVRTAATRQEG*LLGPSTRQILTRRY Trigger: GTACCTACGTGTCAGGATTTGCCGGGTGCTGGGCCCCAGAAGCCAGCCCTCCTGACGTGTGGCGGCCGTCCTCACCGCTCCCTCCTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654148.1 |
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| CDS GCA 90 bp | AAGCCTTGCTCCCTGGAGCTGGAGCGGTGGCTTCCAACCTGGCAGTaGGGGAGGGGTGCTGGGAGGCTGTTTGTTTACGCTGTGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KPCSLELERWLPTWQ*GRGAGRLFVYAVGG Trigger: CCCTCCCACAGCGTAAACAAACAGCCTCCCAGCACCCCTCCCGCACTGCCAGGTTGGAAGCCACCGCTCCAGCTCCAGGGAGCAAGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 90 bp | CCCAAACATAGGCGAGTGGAGGGAGGACTTAGGGTCACCGTCGGCTaGACTTCACGGACACCGAGGGTGAGCCCCGGGGTGAAGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PKHRRVEGGLRVTVG*TSRTPRVSPGVKEP Trigger: TGGCTCCTTCACCCCGGGGCTCACCCTCGGTGTCCGTGAAGTCCAGCCGACGGTGACCCTAAGTCCTCCCTCCACTCGCCTATGTTTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423122.2 ENST00000654148.1 |
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| CDS CCA 90 bp | GGCACCAAGCCTTGCTCCCTGGAGCTGGAGCGGTGGCTTCCAACCTaGCAGTGCGGGAGGGGTGCTGGGAGGCTGTTTGTTTACGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GTKPCSLELERWLPT*QCGRGAGRLFVYAV Trigger: CACAGCGTAAACAAACAGCCTCCCAGCACCCCTCCCGCACTGCCAGGTTGGAAGCCACCGCTCCAGCTCCAGGGAGCAAGGCTTGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS GCA 90 bp | GAGAGTGGGGGAATCATTAGCACCTGCTTAGTGGGCACCAAGCCTTaGTCCCTGGAGCTGGAGCGGTGGCTTCCAACCTGGCAGTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ESGGIISTCLVGTKP*SLELERWLPTWQCG Trigger: CCCGCACTGCCAGGTTGGAAGCCACCGCTCCAGCTCCAGGGAGCAAGGCTTGGTGCCCACTAAGCAGGTGCTAATGATTCCCCCACTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 90 bp | CTGGAAAACGAGGCTGGGACCCGCTGGGCTGCATTACCAGAAAGGTaGGTATTCCGAGCCCCATTTGGACGGGCTCCTCGGCGTAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LENEAGTRWAALPER*VFRAPFGRAPRRRA Trigger: GGCTCTACGCCGAGGAGCCCGTCCAAATGGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGGTCCCAGCCTCGTTTTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660635.1 |
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| CDS TCA 90 bp | CACGTCAGGAGGGCTGGCTTCTGGGGCCCAGCACCCGGCAAATCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAACCAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: HVRRAGFWGPAPGKS*HVGTHLSEAFEPER Trigger: TCGCTCTGGTTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGATTTGCCGGGTGCTGGGCCCCAGAAGCCAGCCCTCCTGACGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654148.1 |
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| CDS GCA 90 bp | TGTGGTTGGGGCCAGCTCAGGCAGGGTGACACCAAGACAAAGGCCTaGAGGAAGGATGGGCTATCCCCAAACATAGGCGAGTGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: CGWGQLRQGDTKTKA*RKDGLSPNIGEWRE Trigger: CTCCCTCCACTCGCCTATGTTTGGGGATAGCCCATCCTTCCTGCAGGCCTTTGTCTTGGTGTCACCCTGCCTGAGCTGGCCCCAACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423122.2 ENST00000654148.1 |
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| CDS CCA 90 bp | CTGGAAAACGAGGCTGGGACCCGCTGGGCTGCATTACCAGAAAGGTaGGTATTCCGAGCCCAAAGGCCGTCATTTGTCTCCGTCCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: LENEAGTRWAALPER*VFRAQRPSFVSVPA Trigger: TGCGGGGACGGAGACAAATGACGGCCTTTGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGGTCCCAGCCTCGTTTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000444125.2 ENST00000654148.1 ENST00000657651.1 ENST00000665063.1 ENST00000667257.1 |
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| CDS TCA 90 bp | GTGGTTGGGGCCAGCTCAGGCAGGGTGACACCAAGACAAAGGCCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAACCAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: VVGASSGRVTPRQRP*HVGTHLSEAFEPER Trigger: TCGCTCTGGTTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGGCCTTTGTCTTGGTGTCACCCTGCCTGAGCTGGCCCCAACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436710.6 |
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| CDS CCA 90 bp | ACAAAGGCCTGCAGGAAGGATGGGCTATCCCCAAACATAGGCGAGTaGAGGGAGGACTTAGGGTCACCGTCGGCTGGACTTCACGGACAC | + |
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Preference number: 5 (lower is better) Translates to: TKACRKDGLSPNIGE*REDLGSPSAGLHGH Trigger: GTGTCCGTGAAGTCCAGCCGACGGTGACCCTAAGTCCTCCCTCCACTCGCCTATGTTTGGGGATAGCCCATCCTTCCTGCAGGCCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423122.2 ENST00000654148.1 |
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| CDS CCA 90 bp | CTCCTGGCAGCAGTCACACATCAGCATCACTGTTGCTACTGTGGTTaGGGCCAGCTCAGGCAGGGTGACACCAAGACAAAGGCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLAAVTHQHHCCYCG*GQLRQGDTKTKACR Trigger: CCTGCAGGCCTTTGTCTTGGTGTCACCCTGCCTGAGCTGGCCCCAACCACAGTAGCAACAGTGATGCTGATGTGTGACTGCTGCCAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000423122.2 ENST00000654148.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000659864.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS CCA 90 bp | CTCTGGAAGCTGGACCTGGAGGTTCTAGAACAATGTCACCCAAAGTaGAGTGTGCAGAGGAGCCTCAGCACCCCAGCCTCCCAGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LWKLDLEVLEQCHPK*SVQRSLSTPASQVQ Trigger: CTGGACCTGGGAGGCTGGGGTGCTGAGGCTCCTCTGCACACTCCACTTTGGGTGACATTGTTCTAGAACCTCCAGGTCCAGCTTCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS GCA 90 bp | CATGTGAGCAGGCTCCTGGCAGCAGTCACACATCAGCATCACTGTTaGTACTGTGGTTGGGGCCAGCTCAGGCAGGGTGACACCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: HVSRLLAAVTHQHHC*YCGWGQLRQGDTKT Trigger: TGTCTTGGTGTCACCCTGCCTGAGCTGGCCCCAACCACAGTAGCAACAGTGATGCTGATGTGTGACTGCTGCCAGGAGCCTGCTCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000423122.2 ENST00000436710.6 ENST00000654148.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000659864.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS CCA 90 bp | TTGAGGCTTCAGTGGGCTATGACCACACCATGGCACTCCAACTTCTaGAGAGGAGACCTAGGGCTCTGCATTCGTCCCCAGGCTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: LRLQWAMTTPWHSNF*RGDLGLCIRPQAHH Trigger: GTGGTGAGCCTGGGGACGAATGCAGAGCCCTAGGTCTCCTCTCCAGAAGTTGGAGTGCCATGGTGTGGTCATAGCCCACTGAAGCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 |
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| CDS CCA 90 bp | GCTGAGGCGGAAGGATGGCTTCAGCCCAGAGGTTTGAGGCTTCAGTaGGCTATGACCACACCATGGCACTCCAACTTCTGGAGAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: AEAEGWLQPRGLRLQ*AMTTPWHSNFWRGD Trigger: GTCTCCTCTCCAGAAGTTGGAGTGCCATGGTGTGGTCATAGCCCACTGAAGCCTCAAACCTCTGGGCTGAAGCCATCCTTCCGCCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 |
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| CDS CCA 90 bp | CTCCTGGCAGCAGTCACACATCAGCATCACTGTTGCTACTGTGGTTaGGGCCAGCTCAGGCAGGGTGACACCAAGACAAAGGCCCTGACA | + |
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Preference number: 5 (lower is better) Translates to: LLAAVTHQHHCCYCG*GQLRQGDTKTKALT Trigger: TGTCAGGGCCTTTGTCTTGGTGTCACCCTGCCTGAGCTGGCCCCAACCACAGTAGCAACAGTGATGCTGATGTGTGACTGCTGCCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436710.6 |
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| CDS TCA 90 bp | AGGTACACACTTGTCAGAGGCGTTCGAACCAGAGCGACTCCATTTTaGGTGAGGGCTGGAAAACGAGGCTGGGACCCGCTGGGCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: RYTLVRGVRTRATPF*VRAGKRGWDPLGCI Trigger: AATGCAGCCCAGCGGGTCCCAGCCTCGTTTTCCAGCCCTCACTCAAAATGGAGTCGCTCTGGTTCGAACGCCTCTGACAAGTGTGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000427109.2 ENST00000436710.6 ENST00000444125.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000659864.1 ENST00000660036.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 ENST00000666671.1 ENST00000667257.1 |
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| CDS GCA 90 bp | GTGATGTCAGGGCGGGTGTTCTTACCACGATGCTACGCAGCTGTATaGATTCAGACAGTGCCAGGCACAGTGCCATGCACCTATGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: VMSGRVFLPRCYAAV*IQTVPGTVPCTYGP Trigger: GGGACCATAGGTGCATGGCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGCGTAGCATCGTGGTAAGAACACCCGCCCTGACATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000666671.1 |
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| CDS CCA 90 bp | GGGAGGGTGTATTCAGAGAGGGGTAGTGCACGCGTCCACTCCAGATaGTCCTCAGGGAAAGAACTTTCTCCACACGGTCATGTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRVYSERGSARVHSR*SSGKELSPHGHVSR Trigger: CCTGCTCACATGACCGTGTGGAGAAAGTTCTTTCCCTGAGGACCATCTGGAGTGGACGCGTGCACTACCCCTCTCTGAATACACCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000423122.2 ENST00000427109.2 ENST00000436710.6 ENST00000444125.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000659864.1 ENST00000660036.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS TCA 90 bp | AGGACGCTGCTGCTGTTGTTCTCCCCATTTTGCAGATGTGAGAACTaGGGCTCAGCTGGGACGTGGATGCAGGTCTGTGTGATGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RTLLLLFSPFCRCEN*GSAGTWMQVCVMSG Trigger: CCCTGACATCACACAGACCTGCATCCACGTCCCAGCTGAGCCTCAGTTCTCACATCTGCAAAATGGGGAGAACAACAGCAGCAGCGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 ENST00000666671.1 |
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| CDS GCA 90 bp | TGGATGCAGGTCTGTGTGATGTCAGGGCGGGTGTTCTTACCACGATaGTACGCAGCTGTATGCATTCAGACAGTGCCAGGCACAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: WMQVCVMSGRVFLPR*YAAVCIQTVPGTVP Trigger: TGGCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGCGTAGCATCGTGGTAAGAACACCCGCCCTGACATCACACAGACCTGCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000666671.1 |
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| CDS GCA 90 bp | GACCAACTGTCCACATCTGCAAACGCTCTGAGAAGCCCAGCTGTATaGATTCAGACAGTGCCAGGCACAGTGCCATGCACCTATGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: DQLSTSANALRSPAV*IQTVPGTVPCTYGP Trigger: GGGACCATAGGTGCATGGCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGGGCTTCTCAGAGCGTTTGCAGATGTGGACAGTTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS CCA 90 bp | CTTCAGCCCAGAGGTTTGAGGCTTCAGTGGGCTATGACCACACCATaGCACTCCAACTTCTGGAGAGGAGACCTAGGGCTCTGCATTCGT | + |
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Preference number: 5 (lower is better) Translates to: LQPRGLRLQWAMTTP*HSNFWRGDLGLCIR Trigger: ACGAATGCAGAGCCCTAGGTCTCCTCTCCAGAAGTTGGAGTGCCATGGTGTGGTCATAGCCCACTGAAGCCTCAAACCTCTGGGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 |
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| CDS CCA 90 bp | GGGACTCCAGCTCGGGTTCCATCAACAGTTCTTCTTAAAAGCTCGTaGCCGGGAGGCAGCACTTGTCTCCTGGAAAGCCATCAGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GTPARVPSTVLLKSS*PGGSTCLLESHQVA Trigger: AGCAACCTGATGGCTTTCCAGGAGACAAGTGCTGCCTCCCGGCCACGAGCTTTTAAGAAGAACTGTTGATGGAACCCGAGCTGGAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS TCA 90 bp | CTCAGGGAAAGAACTTTCTCCACACGGTCATGTGAGCAGGCTCCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAACCAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LRERTFSTRSCEQAP*HVGTHLSEAFEPER Trigger: TCGCTCTGGTTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGGAGCCTGCTCACATGACCGTGTGGAGAAAGTTCTTTCCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427109.2 ENST00000444125.2 ENST00000654190.1 ENST00000657886.1 ENST00000660036.1 |
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| CDS TCA 90 bp | TCCTTTCCTAGGCTGGAGACCAACTGTCCACATCTGCAAACGCTCTaGGAAGCCCAGCTGTATGCATTCAGACAGTGCCAGGCACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: SFPRLETNCPHLQTL*EAQLYAFRQCQAQC Trigger: GCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGGGCTTCTCAGAGCGTTTGCAGATGTGGACAGTTGGTCTCCAGCCTAGGAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS CCA 90 bp | CCTGAGCACAAACTAAAGTGGCTCAACTCATCAGGGAGGGCTTCTTaGAGGAAGCGACACTTAGGGAACCCTGTGAGAGCAGAGGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PEHKLKWLNSSGRAS*RKRHLGNPVRAEGE Trigger: CTCTCCCTCTGCTCTCACAGGGTTCCCTAAGTGTCGCTTCCTCCAAGAAGCCCTCCCTGATGAGTTGAGCCACTTTAGTTTGTGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000436710.6 ENST00000654190.1 ENST00000654735.1 ENST00000657886.1 ENST00000661745.1 |
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| CDS TCA 90 bp | ACTCCAGATGGTCCTCAGGGAAAGAACTTTCTCCACACGGTCATGTaGGCAGGCTCCCTGACACGTAGGTACACACTTGTCAGAGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: TPDGPQGKNFLHTVM*AGSLTRRYTLVRGV Trigger: AACGCCTCTGACAAGTGTGTACCTACGTGTCAGGGAGCCTGCTCACATGACCGTGTGGAGAAAGTTCTTTCCCTGAGGACCATCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427109.2 ENST00000444125.2 ENST00000654190.1 ENST00000657886.1 ENST00000660036.1 |
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| CDS TCA 90 bp | ACTCCAGATGGTCCTCAGGGAAAGAACTTTCTCCACACGGTCATGTaGGCAGGCTCCTGGCAGCAGTCACACATCAGCATCACTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TPDGPQGKNFLHTVM*AGSWQQSHISITVA Trigger: AGCAACAGTGATGCTGATGTGTGACTGCTGCCAGGAGCCTGCTCACATGACCGTGTGGAGAAAGTTCTTTCCCTGAGGACCATCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000423122.2 ENST00000436710.6 ENST00000654148.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000659864.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS CCA 90 bp | TGCCCGGCCCCACTTCAAACCTTATCATACCCACTCATGGTCCTCTaGAAGCTGGACCTGGAGGTTCTAGAACAATGTCACCCAAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: CPAPLQTLSYPLMVL*KLDLEVLEQCHPKW Trigger: CCACTTTGGGTGACATTGTTCTAGAACCTCCAGGTCCAGCTTCCAGAGGACCATGAGTGGGTATGATAAGGTTTGAAGTGGGGCCGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS GCA 90 bp | ATTGTGCAAACTCCTTTCCTAGGCTGGAGACCAACTGTCCACATCTaGAAACGCTCTGAGAAGCCCAGCTGTATGCATTCAGACAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: IVQTPFLGWRPTVHI*KRSEKPSCMHSDSA Trigger: GGCACTGTCTGAATGCATACAGCTGGGCTTCTCAGAGCGTTTGCAGATGTGGACAGTTGGTCTCCAGCCTAGGAAAGGAGTTTGCACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS TCA 90 bp | ATGAGGCAGATCTTTCTCTGCACGAAAGAAAAACGTGCAGACGGGTaGTTGCACAACCAGAGCAGCCAAGAGCTAGACCCAATGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: MRQIFLCTKEKRADG*LHNQSSQELDPMES Trigger: AGACTCCATTGGGTCTAGCTCTTGGCTGCTCTGGTTGTGCAATCACCCGTCTGCACGTTTTTCTTTCGTGCAGAGAAAGATCTGCCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS GCA 90 bp | TTGCAGAAAGATGAGGCAGATCTTTCTCTGCACGAAAGAAAAACGTaGAGACGGGTGATTGCACAACCAGAGCAGCCAAGAGCTAGACCC | + |
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Preference number: 5 (lower is better) Translates to: LQKDEADLSLHERKT*RRVIAQPEQPRARP Trigger: GGGTCTAGCTCTTGGCTGCTCTGGTTGTGCAATCACCCGTCTGCACGTTTTTCTTTCGTGCAGAGAAAGATCTGCCTCATCTTTCTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS TCA 90 bp | CTTGTCTCCTGGAAAGCCATCAGGTTGCTAAATGCACCCACCCTTTaGCCAAGCGATTCCACTTTTAGGAAGTTATACCACGGACGCATT | + |
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Preference number: 5 (lower is better) Translates to: LVSWKAIRLLNAPTL*PSDSTFRKLYHGRI Trigger: AATGCGTCCGTGGTATAACTTCCTAAAAGTGGAATCGCTTGGTCAAAGGGTGGGTGCATTTAGCAACCTGATGGCTTTCCAGGAGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 90 bp | ATGCTGAAAGAAACTCATTGCATCGTGTTTTTAATAACAGAGCTTTaGAAATGCCTTAAACACCCATCCGGGGGACTGATGATGAACACG | + |
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Preference number: 5 (lower is better) Translates to: MLKETHCIVFLITEL*KCLKHPSGGLMMNT Trigger: CGTGTTCATCATCAGTCCCCCGGATGGGTGTTTAAGGCATTTCCAAAGCTCTGTTATTAAAAACACGATGCAATGAGTTTCTTTCAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS TCA 90 bp | TCAAGACAAAAAGTGTATAAATACCAAGATGCTCTTGCAGAAAGATaGGGCAGATCTTTCTCTGCACGAAAGAAAAACGTGCAGACGGGT | + |
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Preference number: 5 (lower is better) Translates to: SRQKVYKYQDALAER*GRSFSARKKNVQTG Trigger: ACCCGTCTGCACGTTTTTCTTTCGTGCAGAGAAAGATCTGCCTCATCTTTCTGCAAGAGCATCTTGGTATTTATACACTTTTTGTCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS GCA 90 bp | AAAGAAACTCATTGCATCGTGTTTTTAATAACAGAGCTTTGGAAATaGCTTAAACACCCATCCGGGGGACTGATGATGAACACGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: KETHCIVFLITELWK*LKHPSGGLMMNTKS Trigger: ACTCTTCGTGTTCATCATCAGTCCCCCGGATGGGTGTTTAAGGCATTTCCAAAGCTCTGTTATTAAAAACACGATGCAATGAGTTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000659864.1 ENST00000665063.1 |
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| CDS GCA 90 bp | GACGCATTCACACGGCAACAAGGGGAAATGCTGAAAGAAACTCATTaGATCGTGTTTTTAATAACAGAGCTTTGGAAATGCCTTAAACAC | + |
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Preference number: 5 (lower is better) Translates to: DAFTRQQGEMLKETH*IVFLITELWKCLKH Trigger: GTGTTTAAGGCATTTCCAAAGCTCTGTTATTAAAAACACGATGCAATGAGTTTCTTTCAGCATTTCCCCTTGTTGCCGTGTGAATGCGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | GGAGCGGTGAGGACGGCCGCCACACGTCAGGAGGGCTaGCTTCTGGGGCCCAGCACCCGGCAAATCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: GAVRTAATRQEG*LLGPSTRQILT Trigger: TGTCAGGATTTGCCGGGTGCTGGGCCCCAGAAGCCAGCCCTCCTGACGTGTGGCGGCCGTCCTCACCGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654148.1 |
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| CDS CCA 72 bp | AGGCGAGTGGAGGGAGGACTTAGGGTCACCGTCGGCTaGACTTCACGGACACCGAGGGTGAGCCCCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRVEGGLRVTVG*TSRTPRVSPGV Trigger: CACCCCGGGGCTCACCCTCGGTGTCCGTGAAGTCCAGCCGACGGTGACCCTAAGTCCTCCCTCCACTCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423122.2 ENST00000654148.1 |
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| CDS GCA 72 bp | GGAGCGGTGGCTTCCAACCTGGCAGTGCGGGAGGGGTaGTGGGAGGCTGTTTGTTTACGCTGTGGGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GAVASNLAVREG*WEAVCLRCGRG Trigger: TCCCCTCCCACAGCGTAAACAAACAGCCTCCCAGCACCCCTCCCGCACTGCCAGGTTGGAAGCCACCGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | GCGCATTCTCTGGGCTCAGGGTCTCTGGGTAGGGGCTaGCTCTACAGGATGCTCCAGAGGGCCTCGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: AHSLGSGSLGRG*LYRMLQRASWG Trigger: TCCCCACGAGGCCCTCTGGAGCATCCTGTAGAGCCAGCCCCTACCCAGAGACCCTGAGCCCAGAGAATGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000423122.2 ENST00000427109.2 ENST00000436710.6 ENST00000444125.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000659864.1 ENST00000660036.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS CCA 72 bp | CTGGGATCTCGGAACCCAAGAGGACCCAGGCCTGGCTaGGAAGTGGGGGTCACATGCTGTTTGCTGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGSRNPRGPRPG*EVGVTCCLLGS Trigger: GCTGCCCAGCAAACAGCATGTGACCCCCACTTCCCAGCCAGGCCTGGGTCCTCTTGGGTTCCGAGATCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | GAGGCTGGGACCCGCTGGGCTGCATTACCAGAAAGGTaGGTATTCCGAGCCCCATTTGGACGGGCTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: EAGTRWAALPER*VFRAPFGRAPR Trigger: CCGAGGAGCCCGTCCAAATGGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGGTCCCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660635.1 |
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| CDS CCA 72 bp | GAGGCTGGGACCCGCTGGGCTGCATTACCAGAAAGGTaGGTATTCCGAGCCCCCAGCAGACATTTCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: EAGTRWAALPER*VFRAPSRHFRS Trigger: GCTCCGGAAATGTCTGCTGGGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGGTCCCAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000427109.2 ENST00000436710.6 ENST00000654190.1 ENST00000654735.1 ENST00000657886.1 ENST00000661745.1 |
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| CDS CCA 72 bp | GTCAAGAAGGGATCCCTGAGGATCACAGCAGGGGGCTaGGATCTCGGAACCCAAGAGGACCCAGGCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VKKGSLRITAGG*DLGTQEDPGLA Trigger: AGCCAGGCCTGGGTCCTCTTGGGTTCCGAGATCCCAGCCCCCTGCTGTGATCCTCAGGGATCCCTTCTTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CAA 90 bp | CTGCATTACCAGAAAGGTGGGTATTCCGAGCCCAAAGGCCGTCATTaGTCTCCGTCCCCGCACCCCATCTATCAGGGCCCGGAGCCCGTC | + |
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Preference number: 6 (lower is better) Translates to: LHYQKGGYSEPKGRH*SPSPHPIYQGPEPV Trigger: GACGGGCTCCGGGCCCTGATAGATGGGGTGCGGGGACGGAGACAAATGACGGCCTTTGGGCTCGGAATACCCACCTTTCTGGTAATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000444125.2 ENST00000654148.1 ENST00000657651.1 ENST00000665063.1 ENST00000667257.1 |
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| CDS TCA 72 bp | GGGTCACATGCTGTTTGCTGGGCAGCCGGGGGCCAATaGCTCACCCTCCCAAGAGCACGGTGCTGTCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: GSHAVCWAAGGQ*LTLPRARCCLY Trigger: ATAGAGACAGCACCGTGCTCTTGGGAGGGTGAGTCATTGGCCCCCGGCTGCCCAGCAAACAGCATGTGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CAA 72 bp | CAGAAAGGTGGGTATTCCGAGCCCAAAGGCCGTCATTaGTCTCCGTCCCCGCACCCCATCTATCAGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QKGGYSEPKGRH*SPSPHPIYQGP Trigger: CGGGCCCTGATAGATGGGGTGCGGGGACGGAGACAAATGACGGCCTTTGGGCTCGGAATACCCACCTTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000444125.2 ENST00000654148.1 ENST00000657651.1 ENST00000665063.1 ENST00000667257.1 |
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| CDS TCA 72 bp | AGGGCTGGCTTCTGGGGCCCAGCACCCGGCAAATCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: RAGFWGPAPGKS*HVGTHLSEAFE Trigger: TTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGATTTGCCGGGTGCTGGGCCCCAGAAGCCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654148.1 |
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| CDS GCA 72 bp | GGAATCATTAGCACCTGCTTAGTGGGCACCAAGCCTTaGTCCCTGGAGCTGGAGCGGTGGCTTCCAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GIISTCLVGTKP*SLELERWLPTW Trigger: CCAGGTTGGAAGCCACCGCTCCAGCTCCAGGGAGCAAGGCTTGGTGCCCACTAAGCAGGTGCTAATGATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | GAGGCTGGGACCCGCTGGGCTGCATTACCAGAAAGGTaGGTATTCCGAGCCCAAAGGCCGTCATTTGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EAGTRWAALPER*VFRAQRPSFVS Trigger: GGAGACAAATGACGGCCTTTGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGGTCCCAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000444125.2 ENST00000654148.1 ENST00000657651.1 ENST00000665063.1 ENST00000667257.1 |
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| CDS CAA 90 bp | CCCGCTGGGCTGCATTACCAGAAAGGTGGGTATTCCGAGCCCCATTaGGACGGGCTCCTCGGCGTAGAGCCTGCCAGGAAATCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAGLHYQKGGYSEPH*DGLLGVEPARKSIF Trigger: GAAGATTGATTTCCTGGCAGGCTCTACGCCGAGGAGCCCGTCCAAATGGGGCTCGGAATACCCACCTTTCTGGTAATGCAGCCCAGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660635.1 |
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| CDS TCA 72 bp | CTTGTCAGAGGCGTTCGAACCAGAGCGACTCCATTTTaGGTGAGGGCTGGAAAACGAGGCTGGGACCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVRGVRTRATPF*VRAGKRGWDPL Trigger: CAGCGGGTCCCAGCCTCGTTTTCCAGCCCTCACTCAAAATGGAGTCGCTCTGGTTCGAACGCCTCTGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000427109.2 ENST00000436710.6 ENST00000444125.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000659864.1 ENST00000660036.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 ENST00000666671.1 ENST00000667257.1 |
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| CDS GCA 72 bp | GGGCGGGTGTTCTTACCACGATGCTACGCAGCTGTATaGATTCAGACAGTGCCAGGCACAGTGCCATGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GRVFLPRCYAAV*IQTVPGTVPCT Trigger: GGTGCATGGCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGCGTAGCATCGTGGTAAGAACACCCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000666671.1 |
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| CDS CCA 72 bp | TGCAGGAAGGATGGGCTATCCCCAAACATAGGCGAGTaGAGGGAGGACTTAGGGTCACCGTCGGCTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: CRKDGLSPNIGE*REDLGSPSAGL Trigger: AAGTCCAGCCGACGGTGACCCTAAGTCCTCCCTCCACTCGCCTATGTTTGGGGATAGCCCATCCTTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423122.2 ENST00000654148.1 |
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| CDS CCA 72 bp | CAGTGGGCTATGACCACACCATGGCACTCCAACTTCTaGAGAGGAGACCTAGGGCTCTGCATTCGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QWAMTTPWHSNF*RGDLGLCIRPQ Trigger: CTGGGGACGAATGCAGAGCCCTAGGTCTCCTCTCCAGAAGTTGGAGTGCCATGGTGTGGTCATAGCCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 |
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| CDS CCA 72 bp | CTGGACCTGGAGGTTCTAGAACAATGTCACCCAAAGTaGAGTGTGCAGAGGAGCCTCAGCACCCCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDLEVLEQCHPK*SVQRSLSTPAS Trigger: GGAGGCTGGGGTGCTGAGGCTCCTCTGCACACTCCACTTTGGGTGACATTGTTCTAGAACCTCCAGGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS CAA 72 bp | CTGCATTACCAGAAAGGTGGGTATTCCGAGCCCCATTaGGACGGGCTCCTCGGCGTAGAGCCTGCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LHYQKGGYSEPH*DGLLGVEPARK Trigger: TTTCCTGGCAGGCTCTACGCCGAGGAGCCCGTCCAAATGGGGCTCGGAATACCCACCTTTCTGGTAATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660635.1 |
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| CDS TCA 72 bp | GCCAGCTCAGGCAGGGTGACACCAAGACAAAGGCCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSGRVTPRQRP*HVGTHLSEAFE Trigger: TTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGGCCTTTGTCTTGGTGTCACCCTGCCTGAGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436710.6 |
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| CDS GCA 72 bp | GAAACTTGTGGAGAGCAAGCTCTGGGGGAACACAAGTaGCTCTGGGAGACGCCAGTCAAGAAGGGATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ETCGEQALGEHK*LWETPVKKGSL Trigger: CAGGGATCCCTTCTTGACTGGCGTCTCCCAGAGGCACTTGTGTTCCCCCAGAGCTTGCTCTCCACAAGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | GAAGGATGGCTTCAGCCCAGAGGTTTGAGGCTTCAGTaGGCTATGACCACACCATGGCACTCCAACCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EGWLQPRGLRLQ*AMTTPWHSNPD Trigger: GTCAGGGTTGGAGTGCCATGGTGTGGTCATAGCCCACTGAAGCCTCAAACCTCTGGGCTGAAGCCATCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666671.1 |
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| CDS GCA 72 bp | GTCTGTGTGATGTCAGGGCGGGTGTTCTTACCACGATaGTACGCAGCTGTATGCATTCAGACAGTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VCVMSGRVFLPR*YAAVCIQTVPG Trigger: GCCTGGCACTGTCTGAATGCATACAGCTGCGTAGCATCGTGGTAAGAACACCCGCCCTGACATCACACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000666671.1 |
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| CDS GCA 72 bp | TCCACATCTGCAAACGCTCTGAGAAGCCCAGCTGTATaGATTCAGACAGTGCCAGGCACAGTGCCATGCACC | + |
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Preference number: 6 (lower is better) Translates to: STSANALRSPAV*IQTVPGTVPCT Trigger: GGTGCATGGCACTGTGCCTGGCACTGTCTGAATGCATACAGCTGGGCTTCTCAGAGCGTTTGCAGATGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS CCA 72 bp | GAAGGATGGCTTCAGCCCAGAGGTTTGAGGCTTCAGTaGGCTATGACCACACCATGGCACTCCAACTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EGWLQPRGLRLQ*AMTTPWHSNFW Trigger: CCAGAAGTTGGAGTGCCATGGTGTGGTCATAGCCCACTGAAGCCTCAAACCTCTGGGCTGAAGCCATCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 |
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| CDS TCA 72 bp | CTGCTGTTGTTCTCCCCATTTTGCAGATGTGAGAACTaGGGCTCAGCTGGGACGTGGATGCAGGTCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLFSPFCRCEN*GSAGTWMQVCV Trigger: CACACAGACCTGCATCCACGTCCCAGCTGAGCCTCAGTTCTCACATCTGCAAAATGGGGAGAACAACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000423122.2 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000660036.1 ENST00000661745.1 ENST00000666671.1 |
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| CDS TCA 72 bp | AGGCTGGAGACCAACTGTCCACATCTGCAAACGCTCTaGGAAGCCCAGCTGTATGCATTCAGACAGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLETNCPHLQTL*EAQLYAFRQCQ Trigger: CTGGCACTGTCTGAATGCATACAGCTGGGCTTCTCAGAGCGTTTGCAGATGTGGACAGTTGGTCTCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS GCA 72 bp | GGAACTTTCTTTGAGAGTGGGGGAATCATTAGCACCTaGTTAGTGGGCACCAAGCCTTGCTCCCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTFFESGGIIST*LVGTKPCSLEL Trigger: CAGCTCCAGGGAGCAAGGCTTGGTGCCCACTAAGCAGGTGCTAATGATTCCCCCACTCTCAAAGAAAGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | TTAAAAGCTCGTGGCCGGGAGGCAGCACTTGTCTCCTaGAAAGCCATCAGGTTGCTAAATGCACCCACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKARGREAALVS*KAIRLLNAPTL Trigger: AAGGGTGGGTGCATTTAGCAACCTGATGGCTTTCCAGGAGACAAGTGCTGCCTCCCGGCCACGAGCTTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS TCA 72 bp | AGAACTTTCTCCACACGGTCATGTGAGCAGGCTCCCTaGCACGTAGGTACACACTTGTCAGAGGCGTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTFSTRSCEQAP*HVGTHLSEAFE Trigger: TTCGAACGCCTCTGACAAGTGTGTACCTACGTGTCAGGGAGCCTGCTCACATGACCGTGTGGAGAAAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427109.2 ENST00000444125.2 ENST00000654190.1 ENST00000657886.1 ENST00000660036.1 |
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| CDS CCA 72 bp | TATTCAGAGAGGGGTAGTGCACGCGTCCACTCCAGATaGTCCTCAGGGAAAGAACTTTCTCCACACGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YSERGSARVHSR*SSGKELSPHGH Trigger: ATGACCGTGTGGAGAAAGTTCTTTCCCTGAGGACCATCTGGAGTGGACGCGTGCACTACCCCTCTCTGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000423122.2 ENST00000427109.2 ENST00000436710.6 ENST00000444125.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000657393.1 ENST00000657651.1 ENST00000657886.1 ENST00000659864.1 ENST00000660036.1 ENST00000660635.1 ENST00000661745.1 ENST00000665063.1 |
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| CDS CCA 72 bp | GCTACCAGTGTTAGTACTGGGATCATAGAGTTCAGATaGGCAGGGCAGCTTCTCCCCAGTGTCCCATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ATSVSTGIIEFR*AGQLLPSVPSE Trigger: TTCAGATGGGACACTGGGGAGAAGCTGCCCTGCCCATCTGAACTCTATGATCCCAGTACTAACACTGGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | AGCAATGAGTTTCAGAAACTTGTGGAGAGCAAGCTCTaGGGGAACACAAGTGCCTCTGGGAGACGCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SNEFQKLVESKL*GNTSASGRRQS Trigger: TGACTGGCGTCTCCCAGAGGCACTTGTGTTCCCCCAGAGCTTGCTCTCCACAAGTTTCTGAAACTCATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS TCA 72 bp | ATCTTTCTCTGCACGAAAGAAAAACGTGCAGACGGGTaGTTGCACAACCAGAGCAGCCAAGAGCTAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: IFLCTKEKRADG*LHNQSSQELDP Trigger: TGGGTCTAGCTCTTGGCTGCTCTGGTTGTGCAATCACCCGTCTGCACGTTTTTCTTTCGTGCAGAGAAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS GCA 72 bp | GATGAGGCAGATCTTTCTCTGCACGAAAGAAAAACGTaGAGACGGGTGATTGCACAACCAGAGCAGCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: DEADLSLHERKT*RRVIAQPEQPR Trigger: TCTTGGCTGCTCTGGTTGTGCAATCACCCGTCTGCACGTTTTTCTTTCGTGCAGAGAAAGATCTGCCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS CCA 72 bp | TCCGTTTGGGAAATTGTGCAAACTCCTTTCCTAGGCTaGAGACCAACTGTCCACATCTGCAAACGCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SVWEIVQTPFLG*RPTVHICKRSE Trigger: CTCAGAGCGTTTGCAGATGTGGACAGTTGGTCTCCAGCCTAGGAAAGGAGTTTGCACAATTTCCCAAACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS CCA 72 bp | CCACTTCAAACCTTATCATACCCACTCATGGTCCTCTaGAAGCTGGACCTGGAGGTTCTAGAACAATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLQTLSYPLMVL*KLDLEVLEQCH Trigger: GTGACATTGTTCTAGAACCTCCAGGTCCAGCTTCCAGAGGACCATGAGTGGGTATGATAAGGTTTGAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661745.1 |
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| CDS TCA 72 bp | TGGAAAGCCATCAGGTTGCTAAATGCACCCACCCTTTaGCCAAGCGATTCCACTTTTAGGAAGTTATACCAC | + |
|
Preference number: 6 (lower is better) Translates to: WKAIRLLNAPTL*PSDSTFRKLYH Trigger: GTGGTATAACTTCCTAAAAGTGGAATCGCTTGGTCAAAGGGTGGGTGCATTTAGCAACCTGATGGCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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| CDS GCA 72 bp | CATTGCATCGTGTTTTTAATAACAGAGCTTTGGAAATaGCTTAAACACCCATCCGGGGGACTGATGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HCIVFLITELWK*LKHPSGGLMMN Trigger: GTTCATCATCAGTCCCCCGGATGGGTGTTTAAGGCATTTCCAAAGCTCTGTTATTAAAAACACGATGCAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000427109.2 ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000659864.1 ENST00000665063.1 |
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| CDS CCA 72 bp | GAAACTCATTGCATCGTGTTTTTAATAACAGAGCTTTaGAAATGCCTTAAACACCCATCCGGGGGACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: ETHCIVFLITEL*KCLKHPSGGLM Trigger: CATCAGTCCCCCGGATGGGTGTTTAAGGCATTTCCAAAGCTCTGTTATTAAAAACACGATGCAATGAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000654148.1 ENST00000654190.1 ENST00000654735.1 ENST00000659864.1 ENST00000665063.1 |
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| CDS TCA 72 bp | AAAGTGTATAAATACCAAGATGCTCTTGCAGAAAGATaGGGCAGATCTTTCTCTGCACGAAAGAAAAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: KVYKYQDALAER*GRSFSARKKNV Trigger: CACGTTTTTCTTTCGTGCAGAGAAAGATCTGCCTCATCTTTCTGCAAGAGCATCTTGGTATTTATACACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665063.1 |
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