Pregenerated sensors for LINC01501 (Homo sapiens)
Ensembl gene IDs: ENSG00000229613Ensembl transcript IDs: ENST00000427523.1, ENST00000429044.1, ENST00000449990.2, ENST00000655942.1, ENST00000656691.1, ENST00000658201.1, ENST00000664603.1, ENST00000665289.1, ENST00000665506.1, ENST00000665733.1, ENST00000666177.1, ENST00000666877.1, ENST00000667748.1, ENST00000668156.1, ENST00000668348.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTCCTGGTCATGCTGAGGTCCATCCAGTATGGCCGTGCCAGTTTTaGTCCAACTCAACTTTTCCACATTCAGGTGACCCTCTGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: CPGHAEVHPVWPCQF*SNSTFPHSGDPLLC Trigger: GCACAGCAGAGGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000658201.1 ENST00000664603.1 ENST00000665733.1 ENST00000666877.1 |
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| CDS TCA 90 bp | AGAGGTGGTGGTCCTTGGCAGAATGTGTTCTTGGCACAGGGGATTTaGGCTGAAATGTGTCCTGGTCATGCTGAGGTCCATCCAGTATGG | + |
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Preference number: 5 (lower is better) Translates to: RGGGPWQNVFLAQGI*AEMCPGHAEVHPVW Trigger: CCATACTGGATGGACCTCAGCATGACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000449990.2 ENST00000655942.1 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000665733.1 ENST00000666877.1 ENST00000667748.1 ENST00000668156.1 ENST00000668348.1 |
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| CDS CCA 90 bp | TCACAGTTGTGGGAAGAGGTGGTGGTCCTTGGCAGAATGTGTTCTTaGCACAGGGGATTTGAGCTGAAATGTGTCCTGGTCATGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SQLWEEVVVLGRMCS*HRGFELKCVLVMLR Trigger: CCTCAGCATGACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCTTCCCACAACTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655942.1 ENST00000664603.1 ENST00000665733.1 ENST00000667748.1 ENST00000668156.1 |
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| CDS CCA 90 bp | GTCAGTTCCTGGGTGGGGATGATAGGACTGGTTGGTAGGTCCAGGTaGGGTCATCTCTTGCAGTCTCCAGTCATTATTCCATTGCTACTC | + |
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Preference number: 5 (lower is better) Translates to: VSSWVGMIGLVGRSR*GHLLQSPVIIPLLL Trigger: GAGTAGCAATGGAATAATGACTGGAGACTGCAAGAGATGACCCCACCTGGACCTACCAACCAGTCCTATCATCCCCACCCAGGAACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666177.1 |
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| CDS TCA 90 bp | GCTGTAAGGAGTCGCAGAACCAGAAGAAGGCCAGAGGAGAGACCTTaGAAGTGTGGGATCCCAAGCAGATATCTCAGGTATCCAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: AVRSRRTRRRPEERP*KCGIPSRYLRYPSP Trigger: TGGACTTGGATACCTGAGATATCTGCTTGGGATCCCACACTTTCAAGGTCTCTCCTCTGGCCTTCTTCTGGTTCTGCGACTCCTTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000427523.1 ENST00000449990.2 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000666877.1 ENST00000668348.1 |
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| CDS GCA 90 bp | TGTCCTGGTCATGCTGAGGTCCATCCAGTATGGCCGTGCCAGTTTTaGTCCAACTCAACTTTTCCACATTCAGGTGACCCTCATTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CPGHAEVHPVWPCQF*SNSTFPHSGDPHSP Trigger: TGGAGAATGAGGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000449990.2 ENST00000665289.1 ENST00000665506.1 ENST00000668156.1 |
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| CDS GCA 90 bp | GCTGAAATGTGTCCTGGTCATGCTGAGGTCCATCCAGTATGGCCGTaGCAGTTTTGCTCCAACTCAACTTTTCCACATTCAGGTGACCCT | + |
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Preference number: 5 (lower is better) Translates to: AEMCPGHAEVHPVWP*QFCSNSTFPHSGDP Trigger: AGGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACACATTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000449990.2 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000665733.1 ENST00000666877.1 ENST00000668156.1 ENST00000668348.1 |
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| CDS GCA 90 bp | TTCCACATTCAGGTGACCCTCATTCTCCATGGCTGTTGTTCCATCTaGAGCAGAGGCGATGACTCTGAGAAATGCAATGTAAAACGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FHIQVTLILHGCCSI*SRGDDSEKCNVKRA Trigger: GGCCCGTTTTACATTGCATTTCTCAGAGTCATCGCCTCTGCTGCAGATGGAACAACAGCCATGGAGAATGAGGGTCACCTGAATGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449990.2 ENST00000665289.1 ENST00000665506.1 ENST00000668156.1 |
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| CDS GCA 90 bp | GCTGAAATGTGTCCTGGTCATGCTGAGGTCCATCCAGTATGGCCGTaGCAGTTTTGCTCCAACTCAACTTTTCCACATTCAGGTGACCAT | + |
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Preference number: 5 (lower is better) Translates to: AEMCPGHAEVHPVWP*QFCSNSTFPHSGDH Trigger: ATGGTCACCTGAATGTGGAAAAGTTGAGTTGGAGCAAAACTGGCACGGCCATACTGGATGGACCTCAGCATGACCAGGACACATTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655942.1 ENST00000656691.1 ENST00000667748.1 |
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| CDS TCA 90 bp | AACCAGAGTGACTCCATCTTGAGTAGGGGCTGGATAAAATTAGGCTaGGACCTACTGGGCTGCATTCCCACATGGTTAAGGCATTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: NQSDSILSRGWIKLG*DLLGCIPTWLRHSK Trigger: CTTAGAATGCCTTAACCATGTGGGAATGCAGCCCAGTAGGTCTCAGCCTAATTTTATCCAGCCCCTACTCAAGATGGAGTCACTCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667748.1 |
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| CDS GCA 90 bp | AGGCAGCCAAGGACATCCCAATTCATTTACCTCACCACACGTTTTTaGACCTCCTGTGATGACATAAATCCACTCACAGTTGTGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RQPRTSQFIYLTTRF*TSCDDINPLTVVGR Trigger: TCTTCCCACAACTGTGAGTGGATTTATGTCATCACAGGAGGTGCAAAAACGTGTGGTGAGGTAAATGAATTGGGATGTCCTTGGCTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655942.1 ENST00000665733.1 ENST00000667748.1 ENST00000668156.1 |
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| CDS GCA 90 bp | ACTAGGAACCCTGCATTTCTCTCCTTAGCTTACCACTTCTTCCTATaGAAGAGGCTGGGCATGCTGCAAAAGGAAAGAATTCAGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TRNPAFLSLAYHFFL*KRLGMLQKERIQRR Trigger: TCTCCTCTGAATTCTTTCCTTTTGCAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGGGTTCCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667748.1 |
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| CDS TCA 90 bp | GGAAAATCTAAAGAGTTAGAGAAGGTCTGGAGAATAGCCAATGGATaGGCCAAGGGGAAGTGGTTGTGTCAGAGGCATTTGAACCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GKSKELEKVWRIANG*AKGKWLCQRHLNQS Trigger: ACTCTGGTTCAAATGCCTCTGACACAACCACTTCCCCTTGGCTCATCCATTGGCTATTCTCCAGACCTTCTCTAACTCTTTAGATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667748.1 |
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| CDS CCA 72 bp | CCAACTCAGTTGCGACCCTATGCTTCAGAACTCCCCTaGGTCTCCCAGGCCGTTCTTAATGAGGCAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PTQLRPYASELP*VSQAVLNEAKG Trigger: TCCCTTTGCCTCATTAAGAACGGCCTGGGAGACCCAGGGGAGTTCTGAAGCATAGGGTCGCAACTGAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665506.1 ENST00000668348.1 |
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| CDS GCA 72 bp | CCTGCATTTCTCTCCTTAGCTTACCACTTCTTCCTATaGAAGAGGCTGGGCATGCTGCTCCTGAGGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PAFLSLAYHFFL*KRLGMLLLREV Trigger: CACTTCCCTCAGGAGCAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000449990.2 ENST00000655942.1 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665506.1 ENST00000665733.1 ENST00000668156.1 |
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| CDS GCA 72 bp | CTCTATGAATTGAAGTCCAACTCAGTTGCGACCCTATaGTTCAGAACTCCCCTGGGTCTCCCAGGCCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LYELKSNSVATL*FRTPLGLPGRS Trigger: AGAACGGCCTGGGAGACCCAGGGGAGTTCTGAAGCATAGGGTCGCAACTGAGTTGGACTTCAATTCATAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665506.1 ENST00000668348.1 |
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| CDS CCA 72 bp | TGGGAAGAGGTGGTGGTCCTTGGCAGAATGTGTTCTTaGCACAGGGGATTTGAGCTGAAATGTGTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: WEEVVVLGRMCS*HRGFELKCVLV Trigger: GACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000449990.2 ENST00000655942.1 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000665733.1 ENST00000666877.1 ENST00000667748.1 ENST00000668156.1 ENST00000668348.1 |
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| CDS CCA 72 bp | TGGGTGGGGATGATAGGACTGGTTGGTAGGTCCAGGTaGGGTCATCTCTTGCAGTCTCCAGTCATTATTCCA | + |
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Preference number: 6 (lower is better) Translates to: WVGMIGLVGRSR*GHLLQSPVIIP Trigger: TGGAATAATGACTGGAGACTGCAAGAGATGACCCCACCTGGACCTACCAACCAGTCCTATCATCCCCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666177.1 |
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| CDS CAA 90 bp | CGCTGTAAGGAGTCGCAGAACCAGAAGAAGGCCAGAGGAGAGACCTaGAAAGTGTGGGATCCCAAGCAGATATCTCAGGTATCCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RCKESQNQKKARGET*KVWDPKQISQVSKS Trigger: GGACTTGGATACCTGAGATATCTGCTTGGGATCCCACACTTTCAAGGTCTCTCCTCTGGCCTTCTTCTGGTTCTGCGACTCCTTACAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000427523.1 ENST00000449990.2 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000666877.1 ENST00000668348.1 |
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| CDS TCA 72 bp | GGTCCTTGGCAGAATGTGTTCTTGGCACAGGGGATTTaGGCTGAAATGTGTCCTGGTCATGCTGAGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPWQNVFLAQGI*AEMCPGHAEVH Trigger: ATGGACCTCAGCATGACCAGGACACATTTCAGCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000449990.2 ENST00000655942.1 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000665733.1 ENST00000666877.1 ENST00000667748.1 ENST00000668156.1 ENST00000668348.1 |
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| CDS GCA 72 bp | TCCCAAGCAGATATCTCAGGTATCCAAGTCCATCGGTaGTCTGGTAAGCCAGCTCTAGTTGTGGGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SQADISGIQVHR*SGKPALVVGRG Trigger: ACCTCTTCCCACAACTAGAGCTGGCTTACCAGAGCACCGATGGACTTGGATACCTGAGATATCTGCTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000449990.2 ENST00000656691.1 ENST00000658201.1 ENST00000665289.1 ENST00000666877.1 |
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| CDS GCA 72 bp | CCTGCATTTCTCTCCTTAGCTTACCACTTCTTCCTATaGAAGAGGCTGGGCATGCTCTTGCAGTCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PAFLSLAYHFFL*KRLGMLLQSPV Trigger: GACTGGAGACTGCAAGAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665289.1 ENST00000666877.1 |
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| CDS CAA 72 bp | AAATCCACTCACAGTTGTGGGAAGAGGTGGTGGTCCTaGGCAGAATGTGTTCTTGGCACAGGGGATTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KSTHSCGKRWWS*AECVLGTGDLS Trigger: GCTCAAATCCCCTGTGCCAAGAACACATTCTGCCAAGGACCACCACCTCTTCCCACAACTGTGAGTGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655942.1 ENST00000664603.1 ENST00000665733.1 ENST00000667748.1 ENST00000668156.1 |
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| CDS TCA 72 bp | AGTCGCAGAACCAGAAGAAGGCCAGAGGAGAGACCTTaGAAGTGTGGGATCCCAAGCAGATATCTCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SRRTRRRPEERP*KCGIPSRYLRY Trigger: ATACCTGAGATATCTGCTTGGGATCCCACACTTTCAAGGTCTCTCCTCTGGCCTTCTTCTGGTTCTGCGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000427523.1 ENST00000449990.2 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000666877.1 ENST00000668348.1 |
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| CDS GCA 72 bp | CAGGTGACCCTCATTCTCCATGGCTGTTGTTCCATCTaGAGCAGAGGCGATGACTCTGAGAAATGCAATGTA | + |
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Preference number: 6 (lower is better) Translates to: QVTLILHGCCSI*SRGDDSEKCNV Trigger: TACATTGCATTTCTCAGAGTCATCGCCTCTGCTGCAGATGGAACAACAGCCATGGAGAATGAGGGTCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000449990.2 ENST00000665289.1 ENST00000665506.1 ENST00000668156.1 |
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| CDS GCA 72 bp | TCCCAAGCAGATATCTCAGGTATCCAAGTCCATCGGTaGTCTGGTAAGCCAGCTCTCTCACCACACGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQADISGIQVHR*SGKPALSPHVF Trigger: AAAAACGTGTGGTGAGAGAGCTGGCTTACCAGAGCACCGATGGACTTGGATACCTGAGATATCTGCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664603.1 |
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| CDS CAA 72 bp | ATAGGACTGGTTGGTAGGTCCAGGTGGGGTCATCTCTaGCAGTCTCCAGTCATTATTCCATTGCTACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: IGLVGRSRWGHL*QSPVIIPLLLQ Trigger: TTGGAGTAGCAATGGAATAATGACTGGAGACTGCAAGAGATGACCCCACCTGGACCTACCAACCAGTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666177.1 |
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| CDS TCA 72 bp | AAAGAGTTAGAGAAGGTCTGGAGAATAGCCAATGGATaGGCCAAGGGGAAGTGGTTGTGTCAGAGGCATTTG | + |
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Preference number: 6 (lower is better) Translates to: KELEKVWRIANG*AKGKWLCQRHL Trigger: CAAATGCCTCTGACACAACCACTTCCCCTTGGCTCATCCATTGGCTATTCTCCAGACCTTCTCTAACTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667748.1 |
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| CDS GCA 72 bp | AGATTAAATTGTATAGCTCCCTCCACCACCACAATCTaGAACCAAAACCATCCGGGGGACATCCTAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RLNCIAPSTTTI*NQNHPGDILSS Trigger: AGAGCTTAGGATGTCCCCCGGATGGTTTTGGTTGCAGATTGTGGTGGTGGAGGGAGCTATACAATTTAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000449990.2 ENST00000656691.1 ENST00000658201.1 ENST00000664603.1 ENST00000665289.1 ENST00000665506.1 ENST00000666877.1 ENST00000668348.1 |
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| CDS GCA 72 bp | GAGTCTGATTTGCAAACTATGGGTTTGCAATGGGTTTaGAAACTGTGTGTTGCAAGGGTCCGAGTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ESDLQTMGLQWV*KLCVARVRVCR Trigger: TCTGCAGACTCGGACCCTTGCAACACACAGTTTGCAAACCCATTGCAAACCCATAGTTTGCAAATCAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668156.1 |
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| CDS CAA 72 bp | GCCAGCTCTCTTGAAAAAGACCTAACTAAGCCTTGCTaGTGGCTATGCTGCTCTTATGTCTTGTGTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASSLEKDLTKPC*WLCCSYVLCAR Trigger: TCTGGCACACAAGACATAAGAGCAGCATAGCCACAAGCAAGGCTTAGTTAGGTCTTTTTCAAGAGAGCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427523.1 |
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| CDS GCA 72 bp | GTTTTCTCTATTCTAAAGGCAGGAAAGTTGCCCTCTTaGTCAGGCAGCCAAGGACATCCCAATTCATTTACC | + |
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Preference number: 6 (lower is better) Translates to: VFSILKAGKLPS*SGSQGHPNSFT Trigger: GGTAAATGAATTGGGATGTCCTTGGCTGCCTGAGCAAGAGGGCAACTTTCCTGCCTTTAGAATAGAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655942.1 ENST00000665733.1 ENST00000667748.1 ENST00000668156.1 |
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| CDS GCA 72 bp | CCTGCATTTCTCTCCTTAGCTTACCACTTCTTCCTATaGAAGAGGCTGGGCATGCTGCAAAAGGAAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: PAFLSLAYHFFL*KRLGMLQKERI Trigger: AATTCTTTCCTTTTGCAGCATGCCCAGCCTCTTGCATAGGAAGAAGTGGTAAGCTAAGGAGAGAAATGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667748.1 |
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| CDS CCA 72 bp | AGCTCTCTTGAAAAAGACCTAACTAAGCCTTGCTTGTaGCTATGCTGCTCTTATGTCTTGTGTGCCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSLEKDLTKPCL*LCCSYVLCARG Trigger: TCCTCTGGCACACAAGACATAAGAGCAGCATAGCCACAAGCAAGGCTTAGTTAGGTCTTTTTCAAGAGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427523.1 |
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| CDS GCA 72 bp | AGGACATCCCAATTCATTTACCTCACCACACGTTTTTaGACCTCCTGTGATGACATAAATCCACTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: RTSQFIYLTTRF*TSCDDINPLTV Trigger: AACTGTGAGTGGATTTATGTCATCACAGGAGGTGCAAAAACGTGTGGTGAGGTAAATGAATTGGGATGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655942.1 ENST00000665733.1 ENST00000667748.1 ENST00000668156.1 |
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| CDS CAA 72 bp | ACATACGCTGCGGTCAGGGTACTAGGAGTTCATGGGTaGATTTATTTACATCTTTGTGCAGCATGTTTTACA | + |
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Preference number: 6 (lower is better) Translates to: TYAAVRVLGVHG*IYLHLCAACFT Trigger: TGTAAAACATGCTGCACAAAGATGTAAATAAATCAACCCATGAACTCCTAGTACCCTGACCGCAGCGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429044.1 |
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| CDS CAA 90 bp | ATTGATCTTACATACGCTGCGGTCAGGGTACTAGGAGTTCATGGGTaGATTTATTTACATCTTTGTGCAGCATGTTTTACACAGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IDLTYAAVRVLGVHG*IYLHLCAACFTQVP Trigger: TGGAACCTGTGTAAAACATGCTGCACAAAGATGTAAATAAATCAACCCATGAACTCCTAGTACCCTGACCGCAGCGTATGTAAGATCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429044.1 |
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| CDS CAA 90 bp | TGCGGTCAGGGTACTAGGAGTTCATGGGTTGATTTATTTACATCTTaGTGCAGCATGTTTTACACAGGTTCCACAAACATTTCATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: CGQGTRSSWVDLFTS*CSMFYTGSTNISLG Trigger: ACCTAATGAAATGTTTGTGGAACCTGTGTAAAACATGCTGCACAAAGATGTAAATAAATCAACCCATGAACTCCTAGTACCCTGACCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429044.1 |
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