Pregenerated sensors for LINC01498 (Homo sapiens)
Ensembl gene IDs: ENSG00000247213Ensembl transcript IDs: ENST00000502160.6, ENST00000551889.1, ENST00000670674.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGAGGGTCCCACTCTTCCTCCTCTGGCAGAGCCCACCGCAGGAGTaGGCCGTGGCTGGGCAGGGTGGGGCGGTAGACTCAGAGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LRVPLFLLWQSPPQE*AVAGQGGAVDSEVF Trigger: AAAGACCTCTGAGTCTACCGCCCCACCCTGCCCAGCCACGGCTCACTCCTGCGGTGGGCTCTGCCAGAGGAGGAAGAGTGGGACCCTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 90 bp | CTCAGGAATGTGCCCACGGGTCCTTCTGGTGTTGACATCCTGCTGTaGCATTGCTGTGGTCTGCTGGGGCGGCTCCCACCCCCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LRNVPTGPSGVDILL*HCCGLLGRLPPPAQ Trigger: CTGGGCTGGGGGTGGGAGCCGCCCCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | CCTCTGGCAGAGCCCACCGCAGGAGTGAGCCGTGGCTGGGCAGGGTaGGGCGGTAGACTCAGAGGTCTTTGCTCTGGGATCTGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: PLAEPTAGVSRGWAG*GGRLRGLCSGICRT Trigger: TGTTCTGCAGATCCCAGAGCAAAGACCTCTGAGTCTACCGCCCCACCCTGCCCAGCCACGGCTCACTCCTGCGGTGGGCTCTGCCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS CCA 90 bp | ACTCTTCCTCCTCTGGCAGAGCCCACCGCAGGAGTGAGCCGTGGCTaGGCAGGGTGGGGCGGTAGACTCAGAGGTCTTTGCTCTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: TLPPLAEPTAGVSRG*AGWGGRLRGLCSGI Trigger: GATCCCAGAGCAAAGACCTCTGAGTCTACCGCCCCACCCTGCCCAGCCACGGCTCACTCCTGCGGTGGGCTCTGCCAGAGGAGGAAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 90 bp | CTGAGCTCAGGAATGTGCCCACGGGTCCTTCTGGTGTTGACATCCTaGTGTGCCATTGCTGTGGTCTGCTGGGGCGGCTCCCACCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSGMCPRVLLVLTS*CAIAVVCWGGSHPQ Trigger: CTGGGGGTGGGAGCCGCCCCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCCTGAGCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | ACGACAGCGGCTCCGGGACGAAGAGACCCGAGGAAAAGACCGCCGTaGAACTTCCAGTTTCCGGGCCCGCCACCTAGTGTGCCCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: TTAAPGRRDPRKRPP*NFQFPGPPPSVPQI Trigger: GATTTGGGGCACACTAGGTGGCGGGCCCGGAAACTGGAAGTTCCACGGCGGTCTTTTCCTCGGGTCTCTTCGTCCCGGAGCCGCTGTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS CCA 90 bp | TCCCACCCCCAGCCCAGAAGGCAGGATGGCTCACATTCACCCACATaGGGATACAGGCCCAGACGTGGCACTTCTCTCCAGCCTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SHPQPRRQDGSHSPT*GYRPRRGTSLQPQV Trigger: CACCTGAGGCTGGAGAGAAGTGCCACGTCTGGGCCTGTATCCCCATGTGGGTGAATGTGAGCCATCCTGCCTTCTGGGCTGGGGGTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | AGAGCAGAGAAAGTCGAGACTGGAGCTGAGGACCCAGAGAGAGCTTaGGGGTCCCACTCTTCCTCCTCTGGCAGAGCCCACCGCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: RAEKVETGAEDPERA*GSHSSSSGRAHRRS Trigger: ACTCCTGCGGTGGGCTCTGCCAGAGGAGGAAGAGTGGGACCCTCAAGCTCTCTCTGGGTCCTCAGCTCCAGTCTCGACTTTCTCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 90 bp | GTGAGCCGTGGCTGGGCAGGGTGGGGCGGTAGACTCAGAGGTCTTTaGTCTGGGATCTGCAGAACATTTAGGGAGGCATCAGCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VSRGWAGWGGRLRGL*SGICRTFREASAAA Trigger: AGCAGCAGCTGATGCCTCCCTAAATGTTCTGCAGATCCCAGAGCAAAGACCTCTGAGTCTACCGCCCCACCCTGCCCAGCCACGGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS CCA 90 bp | TGGGCCTCTCCACGGGAGGCTGGAGCCTCTGCACAACATGGCAGTTaGCTTCACCTGCAGGGAGTGATCCAAAGTCAGTGGTTTCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: WASPREAGASAQHGS*LHLQGVIQSQWFPH Trigger: GTGAGGAAACCACTGACTTTGGATCACTCCCTGCAGGTGAAGCCAACTGCCATGTTGTGCAGAGGCTCCAGCCTCCCGTGGAGAGGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | CATGGGGATACAGGCCCAGACGTGGCACTTCTCTCCAGCCTCAGGTaGGAGCAAGAGCAAGCCTGCATATCCCTTCTGCCACCATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: HGDTGPDVALLSSLR*EQEQACISLLPPSG Trigger: ACCAGATGGTGGCAGAAGGGATATGCAGGCTTGCTCTTGCTCTCACCTGAGGCTGGAGAGAAGTGCCACGTCTGGGCCTGTATCCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | AACGTCCATTCTTCATGTCTGCTCAGCGCCCACTCCCCAGTCCTCTaGCTTCAGGGCCCCATTTCCTGTGCAGCACCTCTACCTCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: NVHSSCLLSAHSPVL*LQGPISCAAPLPLL Trigger: TAAGAGAGGTAGAGGTGCTGCACAGGAAATGGGGCCCTGAAGCCAGAGGACTGGGGAGTGGGCGCTGAGCAGACATGAAGAATGGACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | TACTTCATAAGATCCATCCATAAGATCCCAGCCTGGCCCTGGAGGTaGACGTCCATTCTTCATGTCTGCTCAGCGCCCACTCCCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: YFIRSIHKIPAWPWR*TSILHVCSAPTPQS Trigger: GGACTGGGGAGTGGGCGCTGAGCAGACATGAAGAATGGACGTTCACCTCCAGGGCCAGGCTGGGATCTTATGGATGGATCTTATGAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | TGCGGCAGCCATCTTGTCACCACGAGAGGAATCCTTGCCTGTAATTaGCAAGCTAGAGCCCCAGGAGAGCTGATGGTGCAGTTCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: CGSHLVTTRGILACN*QARAPGELMVQFQS Trigger: AGACTGGAACTGCACCATCAGCTCTCCTGGGGCTCTAGCTTGTCAATTACAGGCAAGGATTCCTCTCGTGGTGACAAGATGGCTGCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | TTTCCATCCTGTACACTGAAGAGCAGAGAAAGTCGAGACTGGAGCTaGGGACCCAGAGAGAGCTTGAGGGTCCCACTCTTCCTCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPSCTLKSRESRDWS*GPRESLRVPLFLLW Trigger: CCAGAGGAGGAAGAGTGGGACCCTCAAGCTCTCTCTGGGTCCTCAGCTCCAGTCTCGACTTTCTCTGCTCTTCAGTGTACAGGATGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS TCA 90 bp | TCCTGCTTTGGCTGTCTTCCCTTCCTGGATCTGGATGCTATCTTGTaGGGATGTGATTCTCAGAGCTGCGGCAGCCATCTTGTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: SCFGCLPFLDLDAIL*GCDSQSCGSHLVTT Trigger: CGTGGTGACAAGATGGCTGCCGCAGCTCTGAGAATCACATCCTCACAAGATAGCATCCAGATCCAGGAAGGGAAGACAGCCAAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 90 bp | TCTCCAGCCTCAGGTGAGAGCAAGAGCAAGCCTGCATATCCCTTCTaGCACCATCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATGCT | + |
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Preference number: 5 (lower is better) Translates to: SPASGESKSKPAYPF*HHLVLNPQLQQANA Trigger: AGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGATGGTGGCAGAAGGGATATGCAGGCTTGCTCTTGCTCTCACCTGAGGCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | GACTCTTCTTTGGAGCACTGTCCTTGGCCACTGGAGGCTCTCCACTaGCACCCTGAGAATTTTGAATGTGGCACGATGTCAAGTCAGACT | + |
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Preference number: 5 (lower is better) Translates to: DSSLEHCPWPLEALH*HPENFECGTMSSQT Trigger: AGTCTGACTTGACATCGTGCCACATTCAAAATTCTCAGGGTGCCAGTGGAGAGCCTCCAGTGGCCAAGGACAGTGCTCCAAAGAAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 90 bp | GCATCTTGGCAATGGGAAAGGCAGACCCAGGCCCCACTCTTCTCTTaGAGGAACTTCTTTAGCCCTGGTAAGCTCACAGATTGCAAAATC | + |
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Preference number: 5 (lower is better) Translates to: ASWQWERQTQAPLFS*RNFFSPGKLTDCKI Trigger: GATTTTGCAATCTGTGAGCTTACCAGGGCTAAAGAAGTTCCTGCAAGAGAAGAGTGGGGCCTGGGTCTGCCTTTCCCATTGCCAAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | ACCTTCAACAACCAGCTTCCAGACTCTTCTTTGGAGCACTGTCCTTaGCCACTGGAGGCTCTCCACTGGCACCCTGAGAATTTTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: TFNNQLPDSSLEHCP*PLEALHWHPENFEC Trigger: ACATTCAAAATTCTCAGGGTGCCAGTGGAGAGCCTCCAGTGGCCAAGGACAGTGCTCCAAAGAAGAGTCTGGAAGCTGGTTGTTGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | AGCCTCTCTGAACCAGCACTTCTCAAACTTCATGTCAGCATTTCTTaGAGAGTTCCCAGGCCACAGATTCCGGGTGAAGGGGTGAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SLSEPALLKLHVSIS*RVPRPQIPGEGVKS Trigger: GCTTTTCACCCCTTCACCCGGAATCTGTGGCCTGGGAACTCTTCAAGAAATGCTGACATGAAGTTTGAGAAGTGCTGGTTCAGAGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 90 bp | CTTCTGCCACCATCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATaGTTGGATGAGAATGCACACCTGCTCCATCTGCAGCTTCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: LLPPSGPQSSTPASK*LDENAHLLHLQLQY Trigger: ATACTGAAGCTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGATGGTGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | ACATGCAGAGAAAGTGCCTTTCCTGCTTTGGCTGTCTTCCCTTCCTaGATCTGGATGCTATCTTGTGAGGATGTGATTCTCAGAGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: TCRESAFPALAVFPS*IWMLSCEDVILRAA Trigger: CGCAGCTCTGAGAATCACATCCTCACAAGATAGCATCCAGATCCAGGAAGGGAAGACAGCCAAAGCAGGAAAGGCACTTTCTCTGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | TTGATACAGTGCCCTCCTCCTCAGATGATTCATACTCAGGGACTTTaGGCAAATGGCCCCCATCTTCTCAAGGCTCAGTTTTCTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LIQCPPPQMIHTQGL*ANGPHLLKAQFSHL Trigger: CAGATGAGAAAACTGAGCCTTGAGAAGATGGGGGCCATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCACTGTATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | ACTAACTGCAATCCTGGCCAGATGAAAGAGTCACCTGGAACTCCTTaGTCCGTGGTAGAGACCAGCACTTCTCAAATTTCAACGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: TNCNPGQMKESPGTP*SVVETSTSQISTCT Trigger: TGTGCACGTTGAAATTTGAGAAGTGCTGGTCTCTACCACGGATCAAGGAGTTCCAGGTGACTCTTTCATCTGGCCAGGATTGCAGTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | GCTCACCTTTCTGCTTATTTGTTGATTGTCTATCTTCCCAGACTATaGGGCACACACCATCAGGGCAGAGGCCAGGTTTACTCATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: AHLSAYLLIVYLPRL*GTHHQGRGQVYSSG Trigger: ACCAGATGAGTAAACCTGGCCTCTGCCCTGATGGTGTGTGCCTCATAGTCTGGGAAGATAGACAATCAACAAATAAGCAGAAAGGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | GCTTGGATGAGAATGCACACCTGCTCCATCTGCAGCTTCAGTATTTaGGCTTTCAGGGCATCCCCAAGAACCGTGGATAGTTATTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: AWMRMHTCSICSFSI*AFRASPRTVDSYFA Trigger: AGCAAAATAACTATCCACGGTTCTTGGGGATGCCCTGAAAGCTCAAATACTGAAGCTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | ACCATCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATGCTTGGATaGGAATGCACACCTGCTCCATCTGCAGCTTCAGTATTTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: TIWSSILNSSKQMLG*ECTPAPSAASVFEL Trigger: AAGCTCAAATACTGAAGCTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | CCCCAAGAGACAATTCTTGGATCTCGCGTAAGAAAGAATTCAGGGTaGGTCCAGCACTCCTCTTTCCCCTTCTTAACAGTATGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PQETILGSRVRKNSG*VQHSSFPFLTVCSR Trigger: TCTGCTGCATACTGTTAAGAAGGGGAAAGAGGAGTGCTGGACTCACCCTGAATTCTTTCTTACGCGAGATCCAAGAATTGTCTCTTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | TCATGTCAGCATTTCTTGAAGAGTTCCCAGGCCACAGATTCCGGGTaGAGGGGTGAAAAGCATCAGCATCTTCATTTCACAACCGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SCQHFLKSSQATDSG*RGEKHQHLHFTTGK Trigger: TTTCCCGGTTGTGAAATGAAGATGCTGATGCTTTTCACCCCTTCACCCGGAATCTGTGGCCTGGGAACTCTTCAAGAAATGCTGACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 90 bp | TGTAGCATTGGGTTTGAGTCACTCAGAGAAGCACTGTTGATACAGTaGCCTCCTCCTCAGATGATTCATACTCAGGGACTTTGGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: CSIGFESLREALLIQ*PPPQMIHTQGLWAN Trigger: ATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCACTGTATCAACAGTGCTTCTCTGAGTGACTCAAACCCAATGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 90 bp | ATCTTCACAGTCCCTTTAATAAAAGAGTGGTACATGCAGAGAAAGTaGCTTTCCTGCTTTGGCTGTCTTCCCTTCCTGGATCTGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: IFTVPLIKEWYMQRK*LSCFGCLPFLDLDA Trigger: AGCATCCAGATCCAGGAAGGGAAGACAGCCAAAGCAGGAAAGGCACTTTCTCTGCATGTACCACTCTTTTATTAAAGGGACTGTGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 90 bp | TTACCACCATCAGGAATCATCTTGCTCACCTTTCTGCTTATTTGTTaGTTGTCTATCTTCCCAGACTATGAGGCACACACCATCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LPPSGIILLTFLLIC*LSIFPDYEAHTIRA Trigger: TGCCCTGATGGTGTGTGCCTCATAGTCTGGGAAGATAGACAATCAACAAATAAGCAGAAAGGTGAGCAAGATGATTCCTGATGGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 90 bp | GATGTCGCTTCTTTGGAGAGGCCTTACCACCATCAGGAATCATCTTaGTCACCTTTCTGCTTATTTGTTGATTGTCTATCTTCCCAGACT | + |
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Preference number: 5 (lower is better) Translates to: DVASLERPYHHQESS*SPFCLFVDCLSSQT Trigger: AGTCTGGGAAGATAGACAATCAACAAATAAGCAGAAAGGTGAGCAAGATGATTCCTGATGGTGGTAAGGCCTCTCCAAAGAAGCGACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 90 bp | AACAGACATACACGTGCACAAATACATATGGAGAAGGGTGTGCATTaGTCCATCTGTAAGGGCGCAATAGAATTAACTTGCCCTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: NRHTRAQIHMEKGVH*SICKGAIELTCPVH Trigger: ATGAACAGGGCAAGTTAATTCTATTGCGCCCTTACAGATGGAGCAATGCACACCCTTCTCCATATGTATTTGTGCACGTGTATGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 90 bp | GAGAATTTTGAATGTGGCACGATGTCAAGTCAGACTCTCTCTGAATaGCTGATGTTACTTTCATATAAAAACCTGAAGCCACTGCATCCG | + |
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Preference number: 5 (lower is better) Translates to: ENFECGTMSSQTLSE*LMLLSYKNLKPLHP Trigger: CGGATGCAGTGGCTTCAGGTTTTTATATGAAAGTAACATCAGCCATTCAGAGAGAGTCTGACTTGACATCGTGCCACATTCAAAATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000502160.6 ENST00000670674.1 |
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| CDS GCA 90 bp | AGCTTTTTCCAAGGGCAATGGCAGATTCCATCAAACTTCAAAACTTaGATAAACTTCTACCCTCTCAACTCTATTTCTAGGACCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SFFQGQWQIPSNFKT*INFYPLNSISRTHL Trigger: AAGATGGGTCCTAGAAATAGAGTTGAGAGGGTAGAAGTTTATGCAAGTTTTGAAGTTTGATGGAATCTGCCATTGCCCTTGGAAAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GAGCCCACCGCAGGAGTGAGCCGTGGCTGGGCAGGGTaGGGCGGTAGACTCAGAGGTCTTTGCTCTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: EPTAGVSRGWAG*GGRLRGLCSGI Trigger: GATCCCAGAGCAAAGACCTCTGAGTCTACCGCCCCACCCTGCCCAGCCACGGCTCACTCCTGCGGTGGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 72 bp | GTGCCCACGGGTCCTTCTGGTGTTGACATCCTGCTGTaGCATTGCTGTGGTCTGCTGGGGCGGCTCCCACCC | + |
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Preference number: 6 (lower is better) Translates to: VPTGPSGVDILL*HCCGLLGRLPP Trigger: GGGTGGGAGCCGCCCCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | CTCCGTGTGGGCCTCTCCACGGGAGGCTGGAGCCTCTaGACAACATGGCAGTTGGCTTCACCTGCAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LRVGLSTGGWSL*TTWQLASPAGS Trigger: ACTCCCTGCAGGTGAAGCCAACTGCCATGTTGTGCAGAGGCTCCAGCCTCCCGTGGAGAGGCCCACACGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GAAAGCTCCTGCTGGCGATGGCAGATCCTCTCCGTGTaGGCCTCTCCACGGGAGGCTGGAGCCTCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: ESSCWRWQILSV*ASPREAGASAQ Trigger: TTGTGCAGAGGCTCCAGCCTCCCGTGGAGAGGCCCACACGGAGAGGATCTGCCATCGCCAGCAGGAGCTTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GCTCCGGGACGAAGAGACCCGAGGAAAAGACCGCCGTaGAACTTCCAGTTTCCGGGCCCGCCACCTAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: APGRRDPRKRPP*NFQFPGPPPSV Trigger: CACACTAGGTGGCGGGCCCGGAAACTGGAAGTTCCACGGCGGTCTTTTCCTCGGGTCTCTTCGTCCCGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 72 bp | GGAATGTGCCCACGGGTCCTTCTGGTGTTGACATCCTaGTGTGCCATTGCTGTGGTCTGCTGGGGCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GMCPRVLLVLTS*CAIAVVCWGGS Trigger: GGAGCCGCCCCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GCAGATCCTCTCCGTGTGGGCCTCTCCACGGGAGGCTaGAGCCTCTGCACAACATGGCAGTTGGCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: ADPLRVGLSTGG*SLCTTWQLASP Trigger: AGGTGAAGCCAACTGCCATGTTGTGCAGAGGCTCCAGCCTCCCGTGGAGAGGCCCACACGGAGAGGATCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TCTTCATGTCTGCTCAGCGCCCACTCCCCAGTCCTCTaGCTTCAGGGCCCCATTTCCTGTGCAGCACCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSCLLSAHSPVL*LQGPISCAAPL Trigger: TAGAGGTGCTGCACAGGAAATGGGGCCCTGAAGCCAGAGGACTGGGGAGTGGGCGCTGAGCAGACATGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | CAGCCCAGAAGGCAGGATGGCTCACATTCACCCACATaGGGATACAGGCCCAGACGTGGCACTTCTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QPRRQDGSHSPT*GYRPRRGTSLQ Trigger: CTGGAGAGAAGTGCCACGTCTGGGCCTGTATCCCCATGTGGGTGAATGTGAGCCATCCTGCCTTCTGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | AGTCTTTTCCTGAGCTCAGGAATGTGCCCACGGGTCCTTCTGGTGTaGACATCCTGCTGTGCCATTGCTGTGGTCTGCTGGGGCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLFLSSGMCPRVLLV*TSCCAIAVVCWGGS Trigger: GGAGCCGCCCCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCCTGAGCTCAGGAAAAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | GTGGGCCTCTCCACGGGAGGCTGGAGCCTCTGCACAACATGGCAGTaGGCTTCACCTGCAGGGAGTGATCCAAAGTCAGTGGTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VGLSTGGWSLCTTWQ*ASPAGSDPKSVVSS Trigger: TGAGGAAACCACTGACTTTGGATCACTCCCTGCAGGTGAAGCCAACTGCCATGTTGTGCAGAGGCTCCAGCCTCCCGTGGAGAGGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | CTGAGCTCAGGAATGTGCCCACGGGTCCTTCTGGTGTaGACATCCTGCTGTGCCATTGCTGTGGTCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSGMCPRVLLV*TSCCAIAVVCW Trigger: CCAGCAGACCACAGCAATGGCACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCCTGAGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | TCCACGGGAGGCTGGAGCCTCTGCACAACATGGCAGTaGGCTTCACCTGCAGGGAGTGATCCAAAGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: STGGWSLCTTWQ*ASPAGSDPKSV Trigger: CACTGACTTTGGATCACTCCCTGCAGGTGAAGCCAACTGCCATGTTGTGCAGAGGCTCCAGCCTCCCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | CTCCCCAGTCCTCTGGCTTCAGGGCCCCATTTCCTGTaGAGCACCTCTACCTCTCTTACTTGGTGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSPLASGPHFL*STSTSLTWWCL Trigger: CAAACACCACCAAGTAAGAGAGGTAGAGGTGCTGCACAGGAAATGGGGCCCTGAAGCCAGAGGACTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | TCTCCCATGCCAGAAATCATATGGCTGGAAAGCTCCTaGTGGCGATGGCAGATCCTCTCCGTGTGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPMPEIIWLESS*WRWQILSVWAS Trigger: AGAGGCCCACACGGAGAGGATCTGCCATCGCCAGCAGGAGCTTTCCAGCCATATGATTTCTGGCATGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TTGGAGCACTGTCCTTGGCCACTGGAGGCTCTCCACTaGCACCCTGAGAATTTTGAATGTGGCACGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LEHCPWPLEALH*HPENFECGTMS Trigger: TGACATCGTGCCACATTCAAAATTCTCAGGGTGCCAGTGGAGAGCCTCCAGTGGCCAAGGACAGTGCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TCTTCTCACCAAGTGCTCACACCCAGAATCAAGGGATaGTCCTGCTCAAAGGTAAACTCCAGTCCCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSHQVLTPRIKG*SCSKVNSSPQG Trigger: CCCCTGGGGACTGGAGTTTACCTTTGAGCAGGACCATCCCTTGATTCTGGGTGTGAGCACTTGGTGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502160.6 ENST00000551889.1 |
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| CDS CAA 72 bp | GGCCACTGGAGGCTCTCCACTGGCACCCTGAGAATTTaGAATGTGGCACGATGTCAAGTCAGACTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GHWRLSTGTLRI*NVARCQVRLSL Trigger: CAGAGAGAGTCTGACTTGACATCGTGCCACATTCAAAATTCTCAGGGTGCCAGTGGAGAGCCTCCAGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | CTGTGCAGCACCTCTACCTCTCTTACTTGGTGGTGTTaGGATGGGGCTAACCCTCCTCTCAACTCCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LCSTSTSLTWWC*DGANPPLNSKV Trigger: CACCTTGGAGTTGAGAGGAGGGTTAGCCCCATCCAAACACCACCAAGTAAGAGAGGTAGAGGTGCTGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | GTTTGGATGGGGCTAACCCTCCTCTCAACTCCAAGGTaGGCACATGTCCCAGGCATAGTCAGTCAATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VWMGLTLLSTPR*AHVPGIVSQSE Trigger: CTCTGATTGACTGACTATGCCTGGGACATGTGCTCACCTTGGAGTTGAGAGGAGGGTTAGCCCCATCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | TCCCTTCCTGGATCTGGATGCTATCTTGTGAGGATGTaGTTCTCAGAGCTGCGGCAGCCATCTTGTCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLPGSGCYLVRM*FSELRQPSCHH Trigger: GTGGTGACAAGATGGCTGCCGCAGCTCTGAGAATCACATCCTCACAAGATAGCATCCAGATCCAGGAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | GGCTGTCTTCCCTTCCTGGATCTGGATGCTATCTTGTaGGGATGTGATTCTCAGAGCTGCGGCAGCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GCLPFLDLDAIL*GCDSQSCGSHL Trigger: AAGATGGCTGCCGCAGCTCTGAGAATCACATCCTCACAAGATAGCATCCAGATCCAGGAAGGGAAGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | AAAGCATCAGCATCTTCATTTCACAACCGGGAAAAATaGGGCACACGACAGCGGCTCCGGGACGAAGAGACC | + |
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Preference number: 6 (lower is better) Translates to: KASASSFHNREK*GTRQRLRDEET Trigger: GGTCTCTTCGTCCCGGAGCCGCTGTCGTGTGCCTCATTTTTCCCGGTTGTGAAATGAAGATGCTGATGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 72 bp | TATCTGAGGACACTGTGGAAATGGGCTCCAGGTGTCTaGACAGCCAGCTCCTTCTCCTTTCCTCTCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: YLRTLWKWAPGV*TASSFSFPLNS Trigger: TGAGTTGAGAGGAAAGGAGAAGGAGCTGGCTGTGCAGACACCTGGAGCCCATTTCCACAGTGTCCTCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | CCATCCATTCTGAGTCTTTTCCTGAGCTCAGGAATGTaGCCACGGGTCCTTCTGGTGTTGACATCCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSILSLFLSSGM*PRVLLVLTSCC Trigger: ACAGCAGGATGTCAACACCAGAAGGACCCGTGGGCACATTCCTGAGCTCAGGAAAAGACTCAGAATGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | CAGCTTAGCTGGGTGGTTATGGTTCAGTGTCTCCCATaGCAGAAATCATATGGCTGGAAAGCTCCTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLSWVVMVQCLP*QKSYGWKAPAG Trigger: GCCAGCAGGAGCTTTCCAGCCATATGATTTCTGGCATGGGAGACACTGAACCATAACCACCCAGCTAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | CATTTCCTGTGCAGCACCTCTACCTCTCTTACTTGGTaGTGTTTGGATGGGGCTAACCCTCCTCTCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFLCSTSTSLTW*CLDGANPPLNS Trigger: GGAGTTGAGAGGAGGGTTAGCCCCATCCAAACACCACCAAGTAAGAGAGGTAGAGGTGCTGCACAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GGTTATGGTTCAGTGTCTCCCATGCCAGAAATCATATaGCTGGAAAGCTCCTGCTGGCGATGGCAGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GYGSVSPMPEII*LESSCWRWQIL Trigger: GAGGATCTGCCATCGCCAGCAGGAGCTTTCCAGCCATATGATTTCTGGCATGGGAGACACTGAACCATAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GGTCAGGAATCCAGGGGCAGCTTAGCTGGGTGGTTATaGTTCAGTGTCTCCCATGCCAGAAATCATATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQESRGSLAGWL*FSVSHARNHMA Trigger: AGCCATATGATTTCTGGCATGGGAGACACTGAACCATAACCACCCAGCTAAGCTGCCCCTGGATTCCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | CTTGCAGGTCAGGAATCCAGGGGCAGCTTAGCTGGGTaGTTATGGTTCAGTGTCTCCCATGCCAGAAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LAGQESRGSLAG*LWFSVSHARNH Trigger: ATGATTTCTGGCATGGGAGACACTGAACCATAACCACCCAGCTAAGCTGCCCCTGGATTCCTGACCTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | GTGCCCTCCTCCTCAGATGATTCATACTCAGGGACTTaGGGCAAATGGCCCCCATCTTCTCAAGGCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VPSSSDDSYSGT*GKWPPSSQGSV Trigger: AACTGAGCCTTGAGAAGATGGGGGCCATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | GAAGAGTTCCCAGGCCACAGATTCCGGGTGAAGGGGTaGAAAGCATCAGCATCTTCATTTCACAACCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EEFPGHRFRVKG*KASASSFHNRE Trigger: TTCCCGGTTGTGAAATGAAGATGCTGATGCTTTTCACCCCTTCACCCGGAATCTGTGGCCTGGGAACTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 72 bp | CCATCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATaGTTGGATGAGAATGCACACCTGCTCCATCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGPQSSTPASK*LDENAHLLHLQ Trigger: CTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TTCCAGACTCTTCTTTGGAGCACTGTCCTTGGCCACTaGAGGCTCTCCACTGGCACCCTGAGAATTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FQTLLWSTVLGH*RLSTGTLRILN Trigger: ATTCAAAATTCTCAGGGTGCCAGTGGAGAGCCTCCAGTGGCCAAGGACAGTGCTCCAAAGAAGAGTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TGCCCTCCTCCTCAGATGATTCATACTCAGGGACTTTaGGCAAATGGCCCCCATCTTCTCAAGGCTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CPPPQMIHTQGL*ANGPHLLKAQF Trigger: AAACTGAGCCTTGAGAAGATGGGGGCCATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | TGTGAGGATGTGATTCTCAGAGCTGCGGCAGCCATCTaGTCACCACGAGAGGAATCCTTGCCTGTAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CEDVILRAAAAI*SPREESLPVID Trigger: GTCAATTACAGGCAAGGATTCCTCTCGTGGTGACAAGATGGCTGCCGCAGCTCTGAGAATCACATCCTCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | ACAGCCAGCTCCTTCTCCTTTCCTCTCAACTCAGATGTCGCTTCTTaGGAGAGGCCTTACCACCATCAGGAATCATCTTGCTCACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TASSFSFPLNSDVAS*ERPYHHQESSCSPF Trigger: GAAAGGTGAGCAAGATGATTCCTGATGGTGGTAAGGCCTCTCCAAAGAAGCGACATCTGAGTTGAGAGGAAAGGAGAAGGAGCTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | CTGCCACCATCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATGCTaGGATGAGAATGCACACCTGCTCCATCTGCAGCTTCAGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPPSGPQSSTPASKC*DENAHLLHLQLQYL Trigger: CAAATACTGAAGCTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGATGGTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | AGAATGCACACCTGCTCCATCTGCAGCTTCAGTATTTaGGCTTTCAGGGCATCCCCAAGAACCGTGGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RMHTCSICSFSI*AFRASPRTVDS Trigger: ACTATCCACGGTTCTTGGGGATGCCCTGAAAGCTCAAATACTGAAGCTGCAGATGGAGCAGGTGTGCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | TCTGGTCCTCAATCCTCAACTCCAGCAAGCAAATGCTaGGATGAGAATGCACACCTGCTCCATCTGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGPQSSTPASKC*DENAHLLHLQL Trigger: AAGCTGCAGATGGAGCAGGTGTGCATTCTCATCCAAGCATTTGCTTGCTGGAGTTGAGGATTGAGGACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | GTTGATACAGTGCCCTCCTCCTCAGATGATTCATACTCAGGGACTTaGGGCAAATGGCCCCCATCTTCTCAAGGCTCAGTTTTCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VDTVPSSSDDSYSGT*GKWPPSSQGSVFSS Trigger: AGATGAGAAAACTGAGCCTTGAGAAGATGGGGGCCATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCACTGTATCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | ATGCTATCTTGTGAGGATGTGATTCTCAGAGCTGCGGCAGCCATCTaGTCACCACGAGAGGAATCCTTGCCTGTAATTGACAAGCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: MLSCEDVILRAAAAI*SPREESLPVIDKLE Trigger: CTCTAGCTTGTCAATTACAGGCAAGGATTCCTCTCGTGGTGACAAGATGGCTGCCGCAGCTCTGAGAATCACATCCTCACAAGATAGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | GCCATGAGACTTTTGCTAGAACATCTGCAGAGAAAGTaGTCCCTTTCTGCCAGTGTTGCTAAGCTGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AMRLLLEHLQRK*SLSASVAKLVG Trigger: TCCTACCAGCTTAGCAACACTGGCAGAAAGGGAGCACTTTCTCTGCAGATGTTCTAGCAAAAGTCTCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | GGGTTTGAGTCACTCAGAGAAGCACTGTTGATACAGTaGCCTCCTCCTCAGATGATTCATACTCAGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GFESLREALLIQ*PPPQMIHTQGL Trigger: AAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCACTGTATCAACAGTGCTTCTCTGAGTGACTCAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | CATTGCTCCATCTGTAAGGGCGCAATAGAATTAACTTaGCCTGTTCATGTCTTGCAGGTCAGGAATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCSICKGAIELT*PVHVLQVRNPG Trigger: CCCTGGATTCCTGACCTGCAAGACATGAACAGGGCAAGTTAATTCTATTGCGCCCTTACAGATGGAGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | CCTTCTCCTTTCCTCTCAACTCAGATGTCGCTTCTTTaGAGAGGCCTTACCACCATCAGGAATCATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPFLSTQMSLL*RGLTTIRNHLA Trigger: AGCAAGATGATTCCTGATGGTGGTAAGGCCTCTCCAAAGAAGCGACATCTGAGTTGAGAGGAAAGGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | CAATCCTGGCCAGATGAAAGAGTCACCTGGAACTCCTaGATCCGTGGTAGAGACCAGCACTTCTCAAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: QSWPDERVTWNS*IRGRDQHFSNF Trigger: GAAATTTGAGAAGTGCTGGTCTCTACCACGGATCAAGGAGTTCCAGGTGACTCTTTCATCTGGCCAGGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | TCCTTCTCCTTTCCTCTCAACTCAGATGTCGCTTCTTaGGAGAGGCCTTACCACCATCAGGAATCATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSFPLNSDVAS*ERPYHHQESSC Trigger: GCAAGATGATTCCTGATGGTGGTAAGGCCTCTCCAAAGAAGCGACATCTGAGTTGAGAGGAAAGGAGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 90 bp | TCCTTCTTGTGTAGCATTGGGTTTGAGTCACTCAGAGAAGCACTGTaGATACAGTGCCCTCCTCCTCAGATGATTCATACTCAGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SFLCSIGFESLREAL*IQCPPPQMIHTQGL Trigger: AAGTCCCTGAGTATGAATCATCTGAGGAGGAGGGCACTGTATCAACAGTGCTTCTCTGAGTGACTCAAACCCAATGCTACACAAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | CATTTCTTGAAGAGTTCCCAGGCCACAGATTCCGGGTaGAGGGGTGAAAAGCATCAGCATCTTCATTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HFLKSSQATDSG*RGEKHQHLHFT Trigger: TGTGAAATGAAGATGCTGATGCTTTTCACCCCTTCACCCGGAATCTGTGGCCTGGGAACTCTTCAAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670674.1 |
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| CDS GCA 72 bp | ATAAAAGAGTGGTACATGCAGAGAAAGTGCCTTTCCTaGTTTGGCTGTCTTCCCTTCCTGGATCTGGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: IKEWYMQRKCLS*FGCLPFLDLDA Trigger: AGCATCCAGATCCAGGAAGGGAAGACAGCCAAAGCAGGAAAGGCACTTTCTCTGCATGTACCACTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | TCCTCAGATGATTCATACTCAGGGACTTTGGGCAAATaGCCCCCATCTTCTCAAGGCTCAGTTTTCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSDDSYSGTLGK*PPSSQGSVFSS Trigger: AGATGAGAAAACTGAGCCTTGAGAAGATGGGGGCCATTTGCCCAAAGTCCCTGAGTATGAATCATCTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | AGAATACTTAACTGCTCCATCTGCAGCTTCAGTATTTaGGCTTTCAGGGCATCCCCAAGAACCGTGGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RILNCSICSFSI*AFRASPRTVDS Trigger: ACTATCCACGGTTCTTGGGGATGCCCTGAAAGCTCAAATACTGAAGCTGCAGATGGAGCAGTTAAGTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551889.1 |
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| CDS CAA 72 bp | TGTAGCATTGGGTTTGAGTCACTCAGAGAAGCACTGTaGATACAGTGCCCTCCTCCTCAGATGATTCATACT | + |
|
Preference number: 6 (lower is better) Translates to: CSIGFESLREAL*IQCPPPQMIHT Trigger: AGTATGAATCATCTGAGGAGGAGGGCACTGTATCAACAGTGCTTCTCTGAGTGACTCAAACCCAATGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CAA 72 bp | CTTTCAGGGCATCCCCAAGAACCGTGGATAGTTATTTaGCTTATTTTCTTCTCACCAAGTGCTCACACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSGHPQEPWIVI*LIFFSPSAHTQ Trigger: CTGGGTGTGAGCACTTGGTGAGAAGAAAATAAGCAAAATAACTATCCACGGTTCTTGGGGATGCCCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502160.6 ENST00000551889.1 |
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| CDS CAA 90 bp | GTATTTGAGCTTTCAGGGCATCCCCAAGAACCGTGGATAGTTATTTaGCTTATTTTCTTCTCACCAAGTGCTCACACCCAGAATCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VFELSGHPQEPWIVI*LIFFSPSAHTQNQG Trigger: CCCTTGATTCTGGGTGTGAGCACTTGGTGAGAAGAAAATAAGCAAAATAACTATCCACGGTTCTTGGGGATGCCCTGAAAGCTCAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502160.6 ENST00000551889.1 |
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| CDS TCA 72 bp | ACAATTCTTGGATCTCGCGTAAGAAAGAATTCAGGGTaGGTCCAGCACTCCTCTTTCCCCTTCTTAACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TILGSRVRKNSG*VQHSSFPFLTV Trigger: TACTGTTAAGAAGGGGAAAGAGGAGTGCTGGACTCACCCTGAATTCTTTCTTACGCGAGATCCAAGAATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | ACACGTGCACAAATACATATGGAGAAGGGTGTGCATTaGTCCATCTGTAAGGGCGCAATAGAATTAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRAQIHMEKGVH*SICKGAIELTC Trigger: GCAAGTTAATTCTATTGCGCCCTTACAGATGGAGCAATGCACACCCTTCTCCATATGTATTTGTGCACGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS TCA 72 bp | TCAGGAATCATCTTGCTCACCTTTCTGCTTATTTGTTaGTTGTCTATCTTCCCAGACTATGAGGCACACACC | + |
|
Preference number: 6 (lower is better) Translates to: SGIILLTFLLIC*LSIFPDYEAHT Trigger: GGTGTGTGCCTCATAGTCTGGGAAGATAGACAATCAACAAATAAGCAGAAAGGTGAGCAAGATGATTCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS GCA 72 bp | TCTTTGGAGAGGCCTTACCACCATCAGGAATCATCTTaGTCACCTTTCTGCTTATTTGTTGATTGTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SLERPYHHQESS*SPFCLFVDCLS Trigger: AGATAGACAATCAACAAATAAGCAGAAAGGTGAGCAAGATGATTCCTGATGGTGGTAAGGCCTCTCCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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| CDS CCA 72 bp | GAATGTGGCACGATGTCAAGTCAGACTCTCTCTGAATaGCTGATGTTACTTTCATATAAAAACCTGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ECGTMSSQTLSE*LMLLSYKNLKP Trigger: TGGCTTCAGGTTTTTATATGAAAGTAACATCAGCCATTCAGAGAGAGTCTGACTTGACATCGTGCCACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000502160.6 ENST00000670674.1 |
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| CDS GCA 72 bp | CAAGGGCAATGGCAGATTCCATCAAACTTCAAAACTTaGATAAACTTCTACCCTCTCAACTCTATTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGQWQIPSNFKT*INFYPLNSISR Trigger: CCTAGAAATAGAGTTGAGAGGGTAGAAGTTTATGCAAGTTTTGAAGTTTGATGGAATCTGCCATTGCCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502160.6 |
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