RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01495 (Homo sapiens)

Ensembl gene IDs: ENSG00000255323

Ensembl transcript IDs: ENST00000532380.2, ENST00000534135.6, ENST00000653021.1

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp AGGCTCACTCACATGGATTTTGTCAGGCCTCTGTCCCTTGTCACATaGACCTTCAGCATGATGGCTGGCTTCTCCAGAGTGAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: RLTHMDFVRPLSLVT*TFSMMAGFSRVSNP
Trigger: TGGATTGCTCACTCTGGAGAAGCCAGCCATCATGCTGAAGGTCCATGTGACAAGGGACAGAGGCCTGACAAAATCCATGTGAGTGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS TCA 90 bp TGGGGACTCCGTAGTTCATGTTTAGATAGTATTGGATTACATGACTaGGCTCTCCCCAGTGGCTCTTTAGTACCTGGAGCTAGAGGTAAG +
Preference number: 5 (lower is better)
Translates to: WGLRSSCLDSIGLHD*ALPSGSLVPGARGK
Trigger: CTTACCTCTAGCTCCAGGTACTAAAGAGCCACTGGGGAGAGCTCAGTCATGTAATCCAATACTATCTAAACATGAACTACGGAGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532380.2
CDS CCA 90 bp TCAAGGTGTTTTATTAGATTGCAGTCCAGTTGTCAACTACGTCTGTaGTGTCATCTGAAGGATTATCTTGCAGAGGACCCTCTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SRCFIRLQSSCQLRL*CHLKDYLAEDPLAG
Trigger: GCCTGCAAGAGGGTCCTCTGCAAGATAATCCTTCAGATGACACCACAGACGTAGTTGACAACTGGACTGCAATCTAATAAAACACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS TCA 90 bp CTGATAAAGATATACCTGAGATTAGATAGTATTGGATTACATGACTaGGCTCTCCCCAGTGGCTCTTTAGTACCTGGAGCTAGAGGTAAG +
Preference number: 5 (lower is better)
Translates to: LIKIYLRLDSIGLHD*ALPSGSLVPGARGK
Trigger: CTTACCTCTAGCTCCAGGTACTAAAGAGCCACTGGGGAGAGCTCAGTCATGTAATCCAATACTATCTAATCTCAGGTATATCTTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS CCA 90 bp AAATATTTATTGAGTGTTCCAGATGTTCTCATTCAGTGCCTTGGATaGGGACTCCGTAGTTCATGTTTTGCAGCTTCCATGTGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: KYLLSVPDVLIQCLG*GLRSSCFAASMCQE
Trigger: TTCCTGACACATGGAAGCTGCAAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAATAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS CCA 90 bp AAATATTTATTGAGTGTTCCAGATGTTCTCATTCAGTGCCTTGGATaGGGACTCCGTAGTTCATGTTTAGATAGTATTGGATTACATGAC +
Preference number: 5 (lower is better)
Translates to: KYLLSVPDVLIQCLG*GLRSSCLDSIGLHD
Trigger: GTCATGTAATCCAATACTATCTAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAATAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532380.2
CDS CCA 72 bp CACATGGATTTTGTCAGGCCTCTGTCCCTTGTCACATaGACCTTCAGCATGATGGCTGGCTTCTCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: HMDFVRPLSLVT*TFSMMAGFSRV
Trigger: CACTCTGGAGAAGCCAGCCATCATGCTGAAGGTCCATGTGACAAGGGACAGAGGCCTGACAAAATCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS GCA 72 bp GTGTCATCTGAAGGATTATCTTGCAGAGGACCCTCTTaGAGGCTCACTCACATGGATTTTGTCAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: VSSEGLSCRGPS*RLTHMDFVRPL
Trigger: CAGAGGCCTGACAAAATCCATGTGAGTGAGCCTGCAAGAGGGTCCTCTGCAAGATAATCCTTCAGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS CCA 72 bp TTGAGTGTTCCAGATGTTCTCATTCAGTGCCTTGGATaGGGACTCCGTAGTTCATGTTTTGCAGCTTCCATG +
Preference number: 6 (lower is better)
Translates to: LSVPDVLIQCLG*GLRSSCFAASM
Trigger: CATGGAAGCTGCAAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS TCA 72 bp CCTGGAAAGCAGCTTCTTCTCAATCCTCCTAACTGGTaGGTGGGACATCAACAGCTGTCTTATAACTTTGTC +
Preference number: 6 (lower is better)
Translates to: PGKQLLLNPPNW*VGHQQLSYNFV
Trigger: GACAAAGTTATAAGACAGCTGTTGATGTCCCACTCACCAGTTAGGAGGATTGAGAAGAAGCTGCTTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532380.2
ENST00000534135.6
ENST00000653021.1
CDS TCA 72 bp AGCTTCCATGTGTCAGGAATCAGGGTTAGGTTTAGCTaGGTGCCTCTGTCTCAAGGTGTTTTATTAGATTGC +
Preference number: 6 (lower is better)
Translates to: SFHVSGIRVRFS*VPLSQGVLLDC
Trigger: GCAATCTAATAAAACACCTTGAGACAGAGGCACTCAGCTAAACCTAACCCTGATTCCTGACACATGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS TCA 72 bp CGTAGTTCATGTTTAGATAGTATTGGATTACATGACTaGGCTCTCCCCAGTGGCTCTTTAGTACCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RSSCLDSIGLHD*ALPSGSLVPGA
Trigger: AGCTCCAGGTACTAAAGAGCCACTGGGGAGAGCTCAGTCATGTAATCCAATACTATCTAAACATGAACTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532380.2
CDS CCA 72 bp GAAAGCAGCTTCTTCTCAATCCTCCTAACTGGTGAGTaGGACATCAACAGCTGTCTTATAACTTTGTCTGAT +
Preference number: 6 (lower is better)
Translates to: ESSFFSILLTGE*DINSCLITLSD
Trigger: ATCAGACAAAGTTATAAGACAGCTGTTGATGTCCCACTCACCAGTTAGGAGGATTGAGAAGAAGCTGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532380.2
ENST00000534135.6
ENST00000653021.1
CDS CCA 72 bp TTTATTAGATTGCAGTCCAGTTGTCAACTACGTCTGTaGTGTCATCTGAAGGATTATCTTGCAGAGGACCCT +
Preference number: 6 (lower is better)
Translates to: FIRLQSSCQLRL*CHLKDYLAEDP
Trigger: AGGGTCCTCTGCAAGATAATCCTTCAGATGACACCACAGACGTAGTTGACAACTGGACTGCAATCTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS CCA 72 bp TTGAGTGTTCCAGATGTTCTCATTCAGTGCCTTGGATaGGGACTCCGTAGTTCATGTTTAGATAGTATTGGA +
Preference number: 6 (lower is better)
Translates to: LSVPDVLIQCLG*GLRSSCLDSIG
Trigger: TCCAATACTATCTAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532380.2
CDS GCA 72 bp AAATATTTATTGAGTGTTCCAGATGTTCTCATTCAGTaGCTTGGATGGGGACTCCGTAGTTCATGTTTTGCA +
Preference number: 6 (lower is better)
Translates to: KYLLSVPDVLIQ*LGWGLRSSCFA
Trigger: TGCAAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAATAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534135.6
CDS GCA 72 bp AAATATTTATTGAGTGTTCCAGATGTTCTCATTCAGTaGCTTGGATGGGGACTCCGTAGTTCATGTCTTACA +
Preference number: 6 (lower is better)
Translates to: KYLLSVPDVLIQ*LGWGLRSSCLT
Trigger: TGTAAGACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAATAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000653021.1
CDS GCA 72 bp AAATATTTATTGAGTGTTCCAGATGTTCTCATTCAGTaGCTTGGATGGGGACTCCGTAGTTCATGTTTAGAT +
Preference number: 6 (lower is better)
Translates to: KYLLSVPDVLIQ*LGWGLRSSCLD
Trigger: ATCTAAACATGAACTACGGAGTCCCCATCCAAGGCACTGAATGAGAACATCTGGAACACTCAATAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532380.2