Pregenerated sensors for LINC01493 (Homo sapiens)
Ensembl gene IDs: ENSG00000254562Ensembl transcript IDs: ENST00000530102.1, ENST00000533575.5, ENST00000649890.1, ENST00000660482.1, ENST00000664652.1, ENST00000665044.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCTGTGAACACTGTGCTGAGTCACACTGGAGCATGGTTGGCATTTaGTGCTGGCACTTGGCAGGGAGATCATATGGGATTGACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCEHCAESHWSMVGI*CWHLAGRSYGIDRG Trigger: GCCTCTGTCAATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATGCTCCAGTGTGACTCAGCACAGTGTTCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS CCA 90 bp | TTGAGAGCATGGGCTGTGAACACTGTGCTGAGTCACACTGGAGCATaGTTGGCATTTGATGCTGGCACTTGGCAGGGAGATCATATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRAWAVNTVLSHTGA*LAFDAGTWQGDHMG Trigger: TCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS TCA 90 bp | GGTTGGCATTTGATGCTGGCACTTGGCAGGGAGATCATATGGGATTaGCAGAGGCAAGTTAGTTCTCCATGTGGTCTCCCCATGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWHLMLALGREIIWD*QRQVSSPCGLPMWL Trigger: AAGCCACATGGGGAGACCACATGGAGAACTAACTTGCCTCTGTCAATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000533575.5 ENST00000649890.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS CCA 90 bp | TGCTTTACCTCTTTGCCTCCTCCTAAGCTGAGATTCTTGAGAGCATaGGCTGTGAACACTGTGCTGAGTCACACTGGAGCATGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CFTSLPPPKLRFLRA*AVNTVLSHTGAWLA Trigger: TGCCAACCATGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGAGGTAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS CCA 90 bp | TGCTTTACCTCTTTGCCTCCTCCTAAGCTGAGATTCTTGAGAGCATaGGCTGTGAACACTGTGCTGAGTCACACTGGAGCCTGTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CFTSLPPPKLRFLRA*AVNTVLSHTGACLF Trigger: GAAAAGACAGGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGAGGTAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664652.1 |
||
| CDS GCA 90 bp | CTTTTCTTAATCCTGGTCCTTGTGATTCTCATTTATGTGGCCCAGTaGCTGGCACAAGGTCCCCCACATAACTGGTGCTTAAGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLILVLVILIYVAQ*LAQGPPHNWCLRKQ Trigger: CTGTTTCCTTAAGCACCAGTTATGTGGGGGACCTTGTGCCAGGCACTGGGCCACATAAATGAGAATCACAAGGACCAGGATTAAGAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000533575.5 ENST00000664652.1 |
||
| CDS TCA 90 bp | ACAGTGCCTTGTGGAAACACTCAGACATCATGTAGTAGCCACAGCTaGATGACTTTGAAGAGTATTAGCAGCCTGGATCTGGAGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TVPCGNTQTSCSSHS*MTLKSISSLDLESL Trigger: TAAGGACTCCAGATCCAGGCTGCTAATACTCTTCAAAGTCATTCAGCTGTGGCTACTACATGATGTCTGAGTGTTTCCACAAGGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CCA 90 bp | CTCATTTATGTGGCCCAGTGCCTGGCACAAGGTCCCCCACATAACTaGTGCTTAAGGAAACAGCTTATGATTCAACAAGTCCTTTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIYVAQCLAQGPPHN*CLRKQLMIQQVLYK Trigger: CTTATAAAGGACTTGTTGAATCATAAGCTGTTTCCTTAAGCACCAGTTATGTGGGGGACCTTGTGCCAGGCACTGGGCCACATAAATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533575.5 ENST00000664652.1 |
||
| CDS CCA 90 bp | GAGATTCTTGAGAGCATGGGCTGTGAACACTGTGCTGAGTCACACTaGAGCCTGTCTTTTCTTAATCCTGGTCCTTGTGATTCTCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: EILESMGCEHCAESH*SLSFLNPGPCDSHL Trigger: TAAATGAGAATCACAAGGACCAGGATTAAGAAAAGACAGGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664652.1 |
||
| CDS GCA 90 bp | ATGATGATGCTCACTCTACTTCGATGTTCCCAATGTCCAAAACAGTaGCTTGTGGAAACACTCAGACATCATGTAGTAGCCACAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MMMLTLLRCSQCPKQ*LVETLRHHVVATAE Trigger: TTCAGCTGTGGCTACTACATGATGTCTGAGTGTTTCCACAAGGCACTGTTTTGGACATTGGGAACATCGAAGTAGAGTGAGCATCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 90 bp | AGCCATTTTGACATATCCTGGGTCTTGTTAAAGCGGCAGGGCATCTaGAAAGTTTTGATTCTGTTATGCCACAAGGCATTGAGCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SHFDISWVLLKRQGI*KVLILLCHKALSSI Trigger: TATGCTGCTCAATGCCTTGTGGCATAACAGAATCAAAACTTTTCAGATGCCCTGCCGCTTTAACAAGACCCAGGATATGTCAAAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000530102.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS GCA 90 bp | ATTTATGTGGCCCAGTGCCTGGCACAAGGTCCCCCACATAACTGGTaGTTAAGGAAACAGCTTATGATTCAACAAGTCCTTTATAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IYVAQCLAQGPPHNW*LRKQLMIQQVLYKN Trigger: ATTCTTATAAAGGACTTGTTGAATCATAAGCTGTTTCCTTAAGCACCAGTTATGTGGGGGACCTTGTGCCAGGCACTGGGCCACATAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533575.5 ENST00000664652.1 |
||
| CDS TCA 90 bp | TGTCTCAGTTTTTACAGTAACTCTCCTGTTCACGTTAAGAGTTTATaGCAGGTCCGGCACCCAGTTAAATCCCTTTACATGAATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLSFYSNSPVHVKSL*QVRHPVKSLYMNQL Trigger: GAGCTGATTCATGTAAAGGGATTTAACTGGGTGCCGGACCTGTCATAAACTCTTAACGTGAACAGGAGAGTTACTGTAAAAACTGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 90 bp | AGAAAATGCAGGTCGATGTGTGTGACAGCGAAAGATAAGATCAAATaGAAGTTCTGTGGGAGCCATTTTGACATATCCTGGGTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKCRSMCVTAKDKIK*KFCGSHFDISWVLL Trigger: TAACAAGACCCAGGATATGTCAAAATGGCTCCCACAGAACTTTCATTTGATCTTATCTTTCGCTGTCACACACATCGACCTGCATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000530102.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS CCA 90 bp | GTCTCTACCGTAGGTTTTATCGTGGCATTGGGTTTATTATTTCATTaGCTGAGGAACTTAATTCCCAGTGCTGTCAGTCAGATACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSTVGFIVALGLLFH*LRNLIPSAVSQIHK Trigger: TTTATGTATCTGACTGACAGCACTGGGAATTAAGTTCCTCAGCCAATGAAATAATAAACCCAATGCCACGATAAAACCTACGGTAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 90 bp | ATATTTGATAAATGCAGAGGTAAATGTGCAGAGTTCCTGACTAAATaGCTTATTTACCTTACTGTAGAGCGGCTGTCTTTTCTTAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFDKCRGKCAEFLTK*LIYLTVERLSFLNP Trigger: AGGATTAAGAAAAGACAGCCGCTCTACAGTAAGGTAAATAAGTCATTTAGTCAGGAACTCTGCACATTTACCTCTGCATTTATCAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533575.5 |
||
| CDS CCA 72 bp | TCTTTGCCTCCTCCTAAGCTGAGATTCTTGAGAGCATaGGCTGTGAACACTGTGCTGAGTCACACTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPPPKLRFLRA*AVNTVLSHTGA Trigger: GGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530102.1 ENST00000664652.1 |
||
| CDS CAA 90 bp | GTTGACCTGTGCTTTACCTCTTTGCCTCCTCCTAAGCTGAGATTCTaGAGAGCATGGGCTGTGAACACTGTGCTGAGTCACACTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VDLCFTSLPPPKLRF*RAWAVNTVLSHTGA Trigger: GGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGAGGTAAAGCACAGGTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664652.1 |
||
| CDS CAA 90 bp | GTTGACCTGTGCTTTACCTCTTTGCCTCCTCCTAAGCTGAGATTCTaGAGAGCATGGGCTGTGAACACTGTGCTGAGTCACACTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VDLCFTSLPPPKLRF*RAWAVNTVLSHTGA Trigger: TGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGAGGTAAAGCACAGGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS TCA 72 bp | TTGATGCTGGCACTTGGCAGGGAGATCATATGGGATTaGCAGAGGCAAGTTAGTTCTCCATGTGGTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LMLALGREIIWD*QRQVSSPCGLP Trigger: GGGGAGACCACATGGAGAACTAACTTGCCTCTGTCAATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000533575.5 ENST00000649890.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS TCA 72 bp | CACTGTGCTGAGTCACACTGGAGCATGGTTGGCATTTaGTGCTGGCACTTGGCAGGGAGATCATATGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: HCAESHWSMVGI*CWHLAGRSYGI Trigger: AATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATGCTCCAGTGTGACTCAGCACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS GCA 72 bp | ATCCTGGTCCTTGTGATTCTCATTTATGTGGCCCAGTaGCTGGCACAAGGTCCCCCACATAACTGGTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ILVLVILIYVAQ*LAQGPPHNWCL Trigger: TAAGCACCAGTTATGTGGGGGACCTTGTGCCAGGCACTGGGCCACATAAATGAGAATCACAAGGACCAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000533575.5 ENST00000664652.1 |
||
| CDS CCA 72 bp | CACACTGGAGCATGGTTGGCATTTGATGCTGGCACTTaGCAGGGAGATCATATGGGATTGACAGAGGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HTGAWLAFDAGT*QGDHMGLTEAS Trigger: ACTTGCCTCTGTCAATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATGCTCCAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS CCA 72 bp | TCTTTGCCTCCTCCTAAGCTGAGATTCTTGAGAGCATaGGCTGTGAACACTGTGCTGAGTCACACTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLPPPKLRFLRA*AVNTVLSHTGA Trigger: TGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649890.1 ENST00000665044.1 |
||
| CDS CCA 72 bp | GAGAGCATGGGCTGTGAACACTGTGCTGAGTCACACTaGAGCCTGTCTTTTCTTAATCCTGGTCCTTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ESMGCEHCAESH*SLSFLNPGPCD Trigger: ATCACAAGGACCAGGATTAAGAAAAGACAGGCTCCAGTGTGACTCAGCACAGTGTTCACAGCCCATGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664652.1 |
||
| CDS CAA 72 bp | TGCTTTACCTCTTTGCCTCCTCCTAAGCTGAGATTCTaGAGAGCATGGGCTGTGAACACTGTGCTGAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CFTSLPPPKLRF*RAWAVNTVLSH Trigger: GTGACTCAGCACAGTGTTCACAGCCCATGCTCTCAAGAATCTCAGCTTAGGAGGAGGCAAAGAGGTAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000649890.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS TCA 72 bp | CTTATTTACCTTACTGTAGAGCGGATGGTTGGCATTTaGTGCTGGCACTTGGCAGGGAGATCATATGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LIYLTVERMVGI*CWHLAGRSYGI Trigger: AATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATCCGCTCTACAGTAAGGTAAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660482.1 |
||
| CDS GCA 72 bp | CTCACTCTACTTCGATGTTCCCAATGTCCAAAACAGTaGCTTGTGGAAACACTCAGACATCATGTAGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLRCSQCPKQ*LVETLRHHVVA Trigger: GGCTACTACATGATGTCTGAGTGTTTCCACAAGGCACTGTTTTGGACATTGGGAACATCGAAGTAGAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CAA 72 bp | ACTTATTTACCTTACTGTAGAGCGGATGGTTGGCATTaGATGCTGGCACTTGGCAGGGAGATCATATGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TYLPYCRADGWH*MLALGREIIWD Trigger: ATCCCATATGATCTCCCTGCCAAGTGCCAGCATCAAATGCCAACCATCCGCTCTACAGTAAGGTAAATAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660482.1 |
||
| CDS TCA 72 bp | GACATATCCTGGGTCTTGTTAAAGCGGCAGGGCATCTaGAAAGTTTTGATTCTGTTATGCCACAAGGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: DISWVLLKRQGI*KVLILLCHKAL Trigger: CAATGCCTTGTGGCATAACAGAATCAAAACTTTTCAGATGCCCTGCCGCTTTAACAAGACCCAGGATATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000530102.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS TCA 72 bp | TGTGGTCTCCCCATGTGGCTTGGGCTTCTCATATTATaGCTACTCATTAAAGAACAGAAAGTGGATGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CGLPMWLGLLIL*LLIKEQKVDAV Trigger: GACAGCATCCACTTTCTGTTCTTTAATGAGTAGTCATAATATGAGAAGCCCAAGCCACATGGGGAGACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 72 bp | TGTGGAAACACTCAGACATCATGTAGTAGCCACAGCTaGATGACTTTGAAGAGTATTAGCAGCCTGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGNTQTSCSSHS*MTLKSISSLDL Trigger: CAGATCCAGGCTGCTAATACTCTTCAAAGTCATTCAGCTGTGGCTACTACATGATGTCTGAGTGTTTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CAA 72 bp | GGCAAGTTAGTTCTCCATGTGGTCTCCCCATGTGGCTaGGGCTTCTCATATTATGACTACTCATTAAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GKLVLHVVSPCG*GFSYYDYSLKN Trigger: GTTCTTTAATGAGTAGTCATAATATGAGAAGCCCAAGCCACATGGGGAGACCACATGGAGAACTAACTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CAA 90 bp | ATTGACAGAGGCAAGTTAGTTCTCCATGTGGTCTCCCCATGTGGCTaGGGCTTCTCATATTATGACTACTCATTAAAGAACAGAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IDRGKLVLHVVSPCG*GFSYYDYSLKNRKW Trigger: CCACTTTCTGTTCTTTAATGAGTAGTCATAATATGAGAAGCCCAAGCCACATGGGGAGACCACATGGAGAACTAACTTGCCTCTGTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 72 bp | AGGTCGATGTGTGTGACAGCGAAAGATAAGATCAAATaGAAGTTCTGTGGGAGCCATTTTGACATATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSMCVTAKDKIK*KFCGSHFDISW Trigger: CCAGGATATGTCAAAATGGCTCCCACAGAACTTTCATTTGATCTTATCTTTCGCTGTCACACACATCGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000530102.1 ENST00000660482.1 ENST00000664652.1 ENST00000665044.1 |
||
| CDS TCA 72 bp | TATGACAGGTCCGGCACCCAGTTAAATCCCTTTACATaGATCAGCTCATTTAATTCCATTCCCAAAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: YDRSGTQLNPFT*ISSFNSIPKAP Trigger: AGGTGCTTTGGGAATGGAATTAAATGAGCTGATTCATGTAAAGGGATTTAACTGGGTGCCGGACCTGTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CAA 90 bp | GATCTGGAGTCCTTATCAGTCTCTACCGTAGGTTTTATCGTGGCATaGGGTTTATTATTTCATTGGCTGAGGAACTTAATTCCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DLESLSVSTVGFIVA*GLLFHWLRNLIPSA Trigger: AGCACTGGGAATTAAGTTCCTCAGCCAATGAAATAATAAACCCAATGCCACGATAAAACCTACGGTAGAGACTGATAAGGACTCCAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 72 bp | AAATGCAGAGGTAAATGTGCAGAGTTCCTGACTAAATaGCTTATTTACCTTACTGTAGAGCGGCTCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KCRGKCAEFLTK*LIYLTVERLFA Trigger: GGCAAAGAGCCGCTCTACAGTAAGGTAAATAAGTCATTTAGTCAGGAACTCTGCACATTTACCTCTGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530102.1 |
||
| CDS TCA 72 bp | TTTTACAGTAACTCTCCTGTTCACGTTAAGAGTTTATaGCAGGTCCGGCACCCAGTTAAATCCCTTTACATG | + |
|
Preference number: 6 (lower is better) Translates to: FYSNSPVHVKSL*QVRHPVKSLYM Trigger: CATGTAAAGGGATTTAACTGGGTGCCGGACCTGTCATAAACTCTTAACGTGAACAGGAGAGTTACTGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 72 bp | AAATGCAGAGGTAAATGTGCAGAGTTCCTGACTAAATaGCTTATTTACCTTACTGTAGAGCGGATGGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KCRGKCAEFLTK*LIYLTVERMVG Trigger: GCCAACCATCCGCTCTACAGTAAGGTAAATAAGTCATTTAGTCAGGAACTCTGCACATTTACCTCTGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660482.1 |
||
| CDS CAA 72 bp | TGTAGAGCGGCCCTGAAAGGCATTAATTCATCTGTCTaGCCAGCACTAATGAAGGATATGTACTTTCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: CRAALKGINSSV*PALMKDMYFLC Trigger: ACATAGAAAGTACATATCCTTCATTAGTGCTGGCAAGACAGATGAATTAATGCCTTTCAGGGCCGCTCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664652.1 ENST00000665044.1 |
||
| CDS CAA 90 bp | TTACCTTACTGTAGAGCGGCCCTGAAAGGCATTAATTCATCTGTCTaGCCAGCACTAATGAAGGATATGTACTTTCTATGTAGTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: LPYCRAALKGINSSV*PALMKDMYFLCSPT Trigger: TGTTGGACTACATAGAAAGTACATATCCTTCATTAGTGCTGGCAAGACAGATGAATTAATGCCTTTCAGGGCCGCTCTACAGTAAGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664652.1 ENST00000665044.1 |
||
| CDS CAA 90 bp | TTCTATCTTGCTCTGAAACCCCTGAAAGGCATTAATTCATCTGTCTaGCCAGCACTAATGAAGGATATGTACTTTCTATGTAGTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: FYLALKPLKGINSSV*PALMKDMYFLCSPT Trigger: TGTTGGACTACATAGAAAGTACATATCCTTCATTAGTGCTGGCAAGACAGATGAATTAATGCCTTTCAGGGGTTTCAGAGCAAGATAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS TCA 72 bp | AAATGCAGAGGTAAATGTGCAGAGTTCCTGACTAAATaGCTTATTTACCTTACTGTAGAGCGGCTGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KCRGKCAEFLTK*LIYLTVERLSF Trigger: AAAAGACAGCCGCTCTACAGTAAGGTAAATAAGTCATTTAGTCAGGAACTCTGCACATTTACCTCTGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533575.5 |
||
| CDS CAA 72 bp | TCCTTATCAGTCTCTACCGTAGGTTTTATCGTGGCATaGGGTTTATTATTTCATTGGCTGAGGAACTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SLSVSTVGFIVA*GLLFHWLRNLI Trigger: AATTAAGTTCCTCAGCCAATGAAATAATAAACCCAATGCCACGATAAAACCTACGGTAGAGACTGATAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||
| CDS CAA 72 bp | CTTTGCTATTTCTTTAATGTGTCAGAAAATGGTCAGTaGAGAATTCACAGTACTCTTATTACTTCCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCYFFNVSENGQ*RIHSTLITSPV Trigger: CACAGGGGAAGTAATAAGAGTACTGTGAATTCTCAACTGACCATTTTCTGACACATTAAAGAAATAGCAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649890.1 |
||