Pregenerated sensors for LINC01490 (Homo sapiens)
Ensembl gene IDs: ENSG00000257741Ensembl transcript IDs: ENST00000548705.5, ENST00000551399.1, ENST00000653130.1, ENST00000653991.1, ENST00000655211.1, ENST00000656352.1, ENST00000658715.1, ENST00000663278.1, ENST00000664923.1, ENST00000668136.1, ENST00000669331.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCCAACACTTTAACCTGCTATGTAGGAATCAGACAGCAGTGGCTTaGTTATCTTTCTTGTCCAGTGTCCCTGGTACTAACAGCACCACT | + |
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Preference number: 5 (lower is better) Translates to: IQHFNLLCRNQTAVA*LSFLSSVPGTNSTT Trigger: AGTGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTTAAAGTGTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000548705.5 ENST00000653991.1 ENST00000655211.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 |
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| CDS GCA 90 bp | GGTCTGAAAAACAATCTGCTATGTAGGAATCAGACAGCAGTGGCTTaGTTATCTTTCTTGTCCAGTGTCCCTGGTACTAACAGCACCACT | + |
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Preference number: 5 (lower is better) Translates to: GLKNNLLCRNQTAVA*LSFLSSVPGTNSTT Trigger: AGTGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGATTGTTTTTCAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653130.1 |
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| CDS GCA 90 bp | ATCCAACACTTTAACCTGCTATGTAGGAATCAGACAGCAGTGGCTTaGTTATCTTTCTTGTCCAGTGTCCCTGGTACTAACAGCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: IQHFNLLCRNQTAVA*LSFLSSVPGTNSTF Trigger: GAAGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTTAAAGTGTTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669331.1 |
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| CDS TCA 90 bp | TTCAAACTGGCTGCTGGAATTAGGGGTCTGAAAAACAATCTTGAGTaGAGCAGAAGTAAGGTCTGCTATGTAGGAATCAGACAGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FKLAAGIRGLKNNLE*SRSKVCYVGIRQQW Trigger: CCACTGCTGTCTGATTCCTACATAGCAGACCTTACTTCTGCTTCACTCAAGATTGTTTTTCAGACCCCTAATTCCAGCAGCCAGTTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656352.1 |
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| CDS GCA 90 bp | CTACAGCTGCATACATTCTATAATCCCACCTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTAACACCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LQLHTFYNPTFIFLE*HIYMLAPLFLLTPV Trigger: AACAGGTGTTAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGGGATTATAGAATGTATGCAGCTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655211.1 |
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| CDS TCA 90 bp | GATATCTTGGGATCTAGCAGAATAAAGTCTGGTTTTCAGTCTTCCTaGAGTGAGAATTATGAATCCAACACTTTAACCTGCTATGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: DILGSSRIKSGFQSS*SENYESNTLTCYVG Trigger: TCCTACATAGCAGGTTAAAGTGTTGGATTCATAATTCTCACTTCAGGAAGACTGAAAACCAGACTTTATTCTGCTAGATCCCAAGATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000548705.5 ENST00000551399.1 ENST00000653991.1 ENST00000655211.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 ENST00000669331.1 |
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| CDS TCA 90 bp | GATATCTTGGGATCTAGCAGAATAAAGTCTGGTTTTCAGTCTTCCTaGAGTGAGAATTATGAATCCAACACTTTAACAGCAAGTCAATAC | + |
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Preference number: 5 (lower is better) Translates to: DILGSSRIKSGFQSS*SENYESNTLTASQY Trigger: GTATTGACTTGCTGTTAAAGTGTTGGATTCATAATTCTCACTTCAGGAAGACTGAAAACCAGACTTTATTCTGCTAGATCCCAAGATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656352.1 |
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| CDS TCA 72 bp | CCCCTAGTGCAGGCATCCACAGGAGTGAGATTAAGGTaGGCTGGAGCCCTGCTCAGCTGTCAGCCTAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PLVQASTGVRLR*AGALLSCQPSL Trigger: GAGGCTAGGCTGACAGCTGAGCAGGGCTCCAGCTCACCTTAATCTCACTCCTGTGGATGCCTGCACTAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000551399.1 ENST00000653991.1 ENST00000655211.1 ENST00000656352.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 ENST00000669331.1 |
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| CDS CAA 90 bp | GGTCTGCTATGTAGGAATCAGACAGCAGTGGCTTGCTTATCTTTCTaGTCCAGTGTCCCTGGTACTAACAGCACCACTCCAGCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: GLLCRNQTAVACLSF*SSVPGTNSTTPAHF Trigger: AAAATGTGCTGGAGTGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656352.1 |
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| CDS CAA 90 bp | AACCTGCTATGTAGGAATCAGACAGCAGTGGCTTGCTTATCTTTCTaGTCCAGTGTCCCTGGTACTAACAGCACCTTCATCTTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NLLCRNQTAVACLSF*SSVPGTNSTFIFLE Trigger: CTCCAGGAAGATGAAGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669331.1 |
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| CDS CAA 90 bp | AACCTGCTATGTAGGAATCAGACAGCAGTGGCTTGCTTATCTTTCTaGTCCAGTGTCCCTGGTACTAACAGCACCACTCCAGCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: NLLCRNQTAVACLSF*SSVPGTNSTTPAHF Trigger: AAAATGTGCTGGAGTGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000548705.5 ENST00000653991.1 ENST00000655211.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 |
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| CDS CCA 72 bp | GAGACCTCCATCCTTTCCCTTCTAAACCCCCAGAGCTaGTGGATTATCATGGATGATAGGTACTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ETSILSLLNPQS*WIIMDDRYFLL Trigger: TAAGAGGAAGTACCTATCATCCATGATAATCCACCAGCTCTGGGGGTTTAGAAGGGAAAGGATGGAGGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000548705.5 ENST00000551399.1 ENST00000653991.1 ENST00000655211.1 ENST00000656352.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 ENST00000669331.1 |
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| CDS CAA 90 bp | AACCTGCTATGTAGGAATCAGACAGCAGTGGCTTGCTTATCTTTCTaGTCCAGTGTCCCTGGTACTAACAGCACTTCTATAATCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: NLLCRNQTAVACLSF*SSVPGTNSTSIIPP Trigger: AGGTGGGATTATAGAAGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551399.1 |
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| CDS CAA 90 bp | AATCTGCTATGTAGGAATCAGACAGCAGTGGCTTGCTTATCTTTCTaGTCCAGTGTCCCTGGTACTAACAGCACCACTCCAGCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: NLLCRNQTAVACLSF*SSVPGTNSTTPAHF Trigger: AAAATGTGCTGGAGTGGTGCTGTTAGTACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653130.1 |
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| CDS GCA 72 bp | GTCCCTGGTACTAACAGCACCTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VPGTNSTFIFLE*HIYMLAPLFLL Trigger: TAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGCTGTTAGTACCAGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669331.1 |
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| CDS GCA 72 bp | CCAGACTACAGCTGCATACACTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: PDYSCIHFIFLE*HIYMLAPLFLL Trigger: TAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGTGTATGCAGCTGTAGTCTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663278.1 |
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| CDS CCA 72 bp | AACACTTTAACCTGCTATGTAGGAATCAGACAGCAGTaGCTTGCTTATCTTTCTTGTCCAGTGTCCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: NTLTCYVGIRQQ*LAYLSCPVSLV Trigger: TACCAGGGACACTGGACAAGAAAGATAAGCAAGCCACTGCTGTCTGATTCCTACATAGCAGGTTAAAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000548705.5 ENST00000551399.1 ENST00000653991.1 ENST00000655211.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 ENST00000669331.1 |
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| CDS CCA 72 bp | ACCTCCATCCTTTCCCTTCTAAACCCCCAGAGCTGGTaGATTATCATGGATGATAGGTACTTCCTCTTAATA | + |
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Preference number: 6 (lower is better) Translates to: TSILSLLNPQSW*IIMDDRYFLLI Trigger: TATTAAGAGGAAGTACCTATCATCCATGATAATCCACCAGCTCTGGGGGTTTAGAAGGGAAAGGATGGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000548705.5 ENST00000551399.1 ENST00000653991.1 ENST00000655211.1 ENST00000656352.1 ENST00000658715.1 ENST00000663278.1 ENST00000664923.1 ENST00000668136.1 ENST00000669331.1 |
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| CDS CCA 72 bp | ACTTTAACAGCAAGTCAATACACCAAGATGCTGAGCTaGCGCAGAGAAAGAGATTCAATTGTAGGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: TLTASQYTKMLS*RRERDSIVGSL Trigger: CAGTGACCCTACAATTGAATCTCTTTCTCTGCGCCAGCTCAGCATCTTGGTGTATTGACTTGCTGTTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656352.1 |
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| CDS CAA 72 bp | ACTACAGCTGCATACACGTCTACTCCCTGGAATTACTaGACACACGTAAAGAAAGTAAAGGTTGCGAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: TTAAYTSTPWNY*THVKKVKVASY Trigger: GTAGCTCGCAACCTTTACTTTCTTTACGTGTGTCAAGTAATTCCAGGGAGTAGACGTGTATGCAGCTGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548705.5 ENST00000664923.1 |
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| CDS TCA 72 bp | GACACACGTAAAGAAAGTAAAGGTTGCGAGCTACCATaGCAATCTATGGACACAGGCTTCCTTACAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: DTRKESKGCELP*QSMDTGFLTSS Trigger: AGAACTTGTAAGGAAGCCTGTGTCCATAGATTGTCATGGTAGCTCGCAACCTTTACTTTCTTTACGTGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548705.5 ENST00000664923.1 |
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| CDS TCA 72 bp | GCTGCTGGAATTAGGGGTCTGAAAAACAATCTTGAGTaGAGCAGAAGTAAGGTCTGCTATGTAGGAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: AAGIRGLKNNLE*SRSKVCYVGIR Trigger: TCTGATTCCTACATAGCAGACCTTACTTCTGCTTCACTCAAGATTGTTTTTCAGACCCCTAATTCCAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656352.1 |
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| CDS GCA 72 bp | CAGCACTTCTATAATCCCACCTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QHFYNPTFIFLE*HIYMLAPLFLL Trigger: TAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGGGATTATAGAAGTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551399.1 |
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| CDS CCA 72 bp | ACTAACAGCACTTCTATAATCCCACCTTCATCTTCCTaGAGTGCCATATATATATGCTTGCTCCTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TNSTSIIPPSSS*SAIYICLLLSS Trigger: GGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGGGATTATAGAAGTGCTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551399.1 |
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| CDS CCA 72 bp | AGCTGCATACATTCTATAATCCCACCTTCATCTTCCTaGAGTGCCATATATATATGCTTGCTCCTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCIHSIIPPSSS*SAIYICLLLSS Trigger: GGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGGGATTATAGAATGTATGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655211.1 |
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| CDS GCA 72 bp | TTTAGTCACAGCAAAGCAAGCTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FSHSKASFIFLE*HIYMLAPLFLL Trigger: TAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGCTTGCTTTGCTGTGACTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548705.5 |
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| CDS CCA 72 bp | AAGAAAGTAAAGGTTGCGAGCTACCATGACAATCTATaGACACAGGCTTCCTTACAAGTTCTCTTTAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: KKVKVASYHDNL*TQASLQVLFSH Trigger: GTGACTAAAGAGAACTTGTAAGGAAGCCTGTGTCCATAGATTGTCATGGTAGCTCGCAACCTTTACTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548705.5 ENST00000664923.1 |
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| CDS GCA 72 bp | CATACATTCTATAATCCCACCTTCATCTTCCTGGAGTaGCATATATATATGCTTGCTCCTCTCTTCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: HTFYNPTFIFLE*HIYMLAPLFLL Trigger: TAAGAGGAAGAGAGGAGCAAGCATATATATATGGCACTCCAGGAAGATGAAGGTGGGATTATAGAATGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655211.1 |
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| CDS CCA 72 bp | AACAATTTGAGTAACAGGCCCAATTGTTTTCTTCTCTaGCAGGTACACGATGGAATGTCACACACACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: NNLSNRPNCFLL*QVHDGMSHTQK Trigger: TTTTTGTGTGTGTGACATTCCATCGTGTACCTGCCAGAGAAGAAAACAATTGGGCCTGTTACTCAAATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000551399.1 ENST00000663278.1 ENST00000669331.1 |
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