Pregenerated sensors for LINC01488 (Homo sapiens)
Ensembl gene IDs: ENSG00000285094Ensembl transcript IDs: ENST00000642898.1, ENST00000644563.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGGCAGCGGGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTTaGCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCCTTGGCTCATA | + |
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Preference number: 5 (lower is better) Translates to: VAAGLGSAGGSGKRP*PFWLPEAAHAPWLI Trigger: TATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | TCTCACGGTTCTGGAGGTCGGGAATCGGACACGGTGTCACCGTTCTaGAGTCGAGGTGGCAGCGGGGCTGGGTTCTGCTGGAGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: SHGSGGRESDTVSPF*SRGGSGAGFCWRLR Trigger: CCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACCTCGACTGCAGAACGGTGACACCGTGTCCGATTCCCGACCTCCAGAACCGTGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 90 bp | ATCGGACACGGTGTCACCGTTCTGCAGTCGAGGTGGCAGCGGGGCTaGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTTGCCCTTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: IGHGVTVLQSRWQRG*VLLEAPGRGLALSG Trigger: GCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACCTCGACTGCAGAACGGTGACACCGTGTCCGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 90 bp | TGGAGGTCGGGAATCGGACACGGTGTCACCGTTCTGCAGTCGAGGTaGCAGCGGGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: WRSGIGHGVTVLQSR*QRGWVLLEAPGRGL Trigger: AAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACCTCGACTGCAGAACGGTGACACCGTGTCCGATTCCCGACCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | ACGGTGTCACCGTTCTGCAGTCGAGGTGGCAGCGGGGCTGGGTTCTaGTGGAGGCTCCGGGAAGAGGCCTTGCCCTTTCTGGCTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TVSPFCSRGGSGAGF*WRLREEALPFLASR Trigger: TCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACCTCGACTGCAGAACGGTGACACCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 90 bp | GGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTTGCCCTTTCTaGCTTCCAGAGGCCGCCCATGCTCCTTGGCTCATAGGTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GLGSAGGSGKRPCPF*LPEAAHAPWLIGPP Trigger: AGGAGGACCTATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | CCACTAGGGTGGGACCAGGCCAGGGGAGAGGAGGTTCGAGGCCTGTaGCGTGCATGCAGGATTATCAGGGTTGAGGGGTGGCATGAGACC | + |
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Preference number: 5 (lower is better) Translates to: PLGWDQARGEEVRGL*RACRIIRVEGWHET Trigger: GGTCTCATGCCACCCCTCAACCCTGATAATCCTGCATGCACGGCACAGGCCTCGAACCTCCTCTCCCCTGGCCTGGTCCCACCCTAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | GGATTATCAGGGTTGAGGGGTGGCATGAGACCCTCTTCCTGCCACTaGGCTGGGGCTGGAGTCCTGGCCCAGAAGGCCAAAGGGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GLSGLRGGMRPSSCH*AGAGVLAQKAKGPW Trigger: CCAAGGCCCTTTGGCCTTCTGGGCCAGGACTCCAGCCCCAGCCCAGTGGCAGGAAGAGGGTCTCATGCCACCCCTCAACCCTGATAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | CATGCAGGATTATCAGGGTTGAGGGGTGGCATGAGACCCTCTTCCTaGCACTGGGCTGGGGCTGGAGTCCTGGCCCAGAAGGCCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: HAGLSGLRGGMRPSS*HWAGAGVLAQKAKG Trigger: CCCTTTGGCCTTCTGGGCCAGGACTCCAGCCCCAGCCCAGTGGCAGGAAGAGGGTCTCATGCCACCCCTCAACCCTGATAATCCTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | TGGGACCAGGCCAGGGGAGAGGAGGTTCGAGGCCTGTGCCGTGCATaGAGGATTATCAGGGTTGAGGGGTGGCATGAGACCCTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: WDQARGEEVRGLCRA*RIIRVEGWHETLFL Trigger: CAGGAAGAGGGTCTCATGCCACCCCTCAACCCTGATAATCCTGCATGCACGGCACAGGCCTCGAACCTCCTCTCCCCTGGCCTGGTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | CAGTTGACTCAGATGGGCACTGATAACGCGGCTGAGGGCTGGTCCTaGAGCAGGGCTGGGGTGGCTCTGGCTCTATGCCCATCTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLTQMGTDNAAEGWS*SRAGVALALCPSVP Trigger: TGGCACAGATGGGCATAGAGCCAGAGCCACCCCAGCCCTGCTGCAGGACCAGCCCTCAGCCGCGTTATCAGTGCCCATCTGAGTCAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | ATGCCCTGCAGAAAGGCTGGCTTCTCCGCCTCCTTGTCTCCTCTGTaGGGGGTGGGCCTGGCCCTGTCATGCCAGAGAGGAATATCGGTG | + |
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Preference number: 5 (lower is better) Translates to: MPCRKAGFSASLSPL*GVGLALSCQRGISV Trigger: CACCGATATTCCTCTCTGGCATGACAGGGCCAGGCCCACCCCCCACAGAGGAGACAAGGAGGCGGAGAAGCCAGCCTTTCTGCAGGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | CACTGGGCTGGGGCTGGAGTCCTGGCCCAGAAGGCCAAAGGGCCTTaGCCAAATTCCCTCCATCCATGTCTGTGCCTCAGTTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HWAGAGVLAQKAKGP*PNSLHPCLCLSFLL Trigger: GAGGAGGAAACTGAGGCACAGACATGGATGGAGGGAATTTGGCCAAGGCCCTTTGGCCTTCTGGGCCAGGACTCCAGCCCCAGCCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | GCCCAGTCTTCTCGCAGAGCAGAACACATCCCTGTCAGGTCTTCCTaGCCTCTGCTTAGACCTGGCGGGGGAGGCGATGTGTCAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AQSSRRAEHIPVRSS*PLLRPGGGGDVSGK Trigger: CTTCCCTGACACATCGCCTCCCCCGCCAGGTCTAAGCAGAGGCCAGGAAGACCTGACAGGGATGTGTTCTGCTCTGCGAGAAGACTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | TGCTTAGACCTGGCGGGGGAGGCGATGTGTCAGGGAAGGATTTCTTaGGATGTCCTAGCCGCCCTAGTCCCCACGCTGCTGGACAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: CLDLAGEAMCQGRIS*DVLAALVPTLLDSS Trigger: TGAGCTGTCCAGCAGCGTGGGGACTAGGGCGGCTAGGACATCTCAAGAAATCCTTCCCTGACACATCGCCTCCCCCGCCAGGTCTAAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | GATACTGCTGCACTGCTGAGCGCCTGCTGTGCCGGGGTCTACCACTaGACTTTCCCAATGACACTGTCAACTGGGGACCAGCGACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: DTAALLSACCAGVYH*TFPMTLSTGDQRLP Trigger: TGGGAGTCGCTGGTCCCCAGTTGACAGTGTCATTGGGAAAGTCCAGTGGTAGACCCCGGCACAGCAGGCGCTCAGCAGTGCAGCAGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | GTGAGTGACATCTTGCTGGGTCCAAGGTGCTGTCTGTGTGGCAGGTaGGGGACTGACGGACGGCTTGGGTGCCATTTCTTTGACGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: VSDILLGPRCCLCGR*GTDGRLGCHFFDVG Trigger: CCCCACGTCAAAGAAATGGCACCCAAGCCGTCCGTCAGTCCCTCACCTGCCACACAGACAGCACCTTGGACCCAGCAAGATGTCACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | GCGATGCCAGTGGGCCTTCCTGGGTGGATGCGTCTTTCATCTCCATaGTGCGTTCTCATCCCAGCTCACAACCCACAGCATTCCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AMPVGLPGWMRLSSP*CVLIPAHNPQHSRR Trigger: CCTCCTGGAATGCTGTGGGTTGTGAGCTGGGATGAGAACGCAGCATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCACTGGCATCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | GTCTTTCTGTGCATCTGGCAACCACATAGCCCTGTGCCTATGCCCTaGAGAAAGGCTGGCTTCTCCGCCTCCTTGTCTCCTCTGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VFLCIWQPHSPVPMP*RKAGFSASLSPLWG Trigger: CCCCCACAGAGGAGACAAGGAGGCGGAGAAGCCAGCCTTTCTGCAGGGCATAGGCACAGGGCTATGTGGTTGCCAGATGCACAGAAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | CCCCATTGGCCCTGTCGTCTGCCCACAGATGCTGTACTTGCCTCCTaGCCTCAAATATTGGCTAGGGCAGGCAGAGGGGTCAGCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: PHWPCRLPTDAVLAS*PQILARAGRGVSIA Trigger: AGCAATGCTGACCCCTCTGCCTGCCCTAGCCAATATTTGAGGTCAGGAGGCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | ATAGAGATCTCTAAGGCGGCTCCCATCTTGACCCGTGTAGGGACCTaGGGTAAGAGCTTGGACCTTGTCCTGGGAGGTCCCGGGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: IEISKAAPILTRVGT*GKSLDLVLGGPGLH Trigger: ATGCAGCCCGGGACCTCCCAGGACAAGGTCCAAGCTCTTACCTCAGGTCCCTACACGGGTCAAGATGGGAGCCGCCTTAGAGATCTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | AAGCCAACAGCACGTCCCTCCGACCTCTGCTTCTATCCTCACATCTaGTCGGCTCCCCCTGCCTCCTCCTCCACTTATAAGCACCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: KPTARPSDLCFYPHI*SAPPASSSTYKHPC Trigger: ACAAGGGTGCTTATAAGTGGAGGAGGAGGCAGGGGGAGCCGAGCAGATGTGAGGATAGAAGCAGAGGTCGGAGGGACGTGCTGTTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | CTTCTCGCAGAGCAGAACACATCCCTGTCAGGTCTTCCTGGCCTCTaGTTAGACCTGGCGGGGGAGGCGATGTGTCAGGGAAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLAEQNTSLSGLPGL*LDLAGEAMCQGRIS Trigger: AGAAATCCTTCCCTGACACATCGCCTCCCCCGCCAGGTCTAAGCAGAGGCCAGGAAGACCTGACAGGGATGTGTTCTGCTCTGCGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | CCAAGCACGTTCCAGGTGTCAGCTCTTTATCCTCCCCCTGGAGCCTaGAAAGCTCAACCTGGCCATCTACTCCTTCATGCTGTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PSTFQVSALYPPPGA*KAQPGHLLLHAVSL Trigger: CAGGGACACAGCATGAAGGAGTAGATGGCCAGGTTGAGCTTTGCAGGCTCCAGGGGGAGGATAAAGAGCTGACACCTGGAACGTGCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS GCA 90 bp | GTGGCAGCAGAAGGCCTGGAGGAGAACCCCATTGGCCCTGTCGTCTaGCCACAGATGCTGTACTTGCCTCCTGACCTCAAATATTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: VAAEGLEENPIGPVV*PQMLYLPPDLKYWL Trigger: TAGCCAATATTTGAGGTCAGGAGGCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGGTTCTCCTCCAGGCCTTCTGCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | GGTGTCAGCTCTTTATCCTCCCCCTGGAGCCTGCAAAGCTCAACCTaGCCATCTACTCCTTCATGCTGTGTCCCTGCTCCCACACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GVSSLSSPWSLQSST*PSTPSCCVPAPTPS Trigger: TGAAGGTGTGGGAGCAGGGACACAGCATGAAGGAGTAGATGGCCAGGTTGAGCTTTGCAGGCTCCAGGGGGAGGATAAAGAGCTGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS CCA 90 bp | CTGGGAATCTTCCCTGAGATTGCGATGCCAGTGGGCCTTCCTGGGTaGATGCGTCTTTCATCTCCATGCTGCGTTCTCATCCCAGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LGIFPEIAMPVGLPG*MRLSSPCCVLIPAH Trigger: GTGAGCTGGGATGAGAACGCAGCATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCACTGGCATCGCAATCTCAGGGAAGATTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 90 bp | CTGCAAAAGCAAGGCGATGCCTGTGGACAGCATCAATGTGGTGAGTaGCATCTTGCTGGGTCCAAGGTGCTGTCTGTGTGGCAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LQKQGDACGQHQCGE*HLAGSKVLSVWQVR Trigger: CCTCACCTGCCACACAGACAGCACCTTGGACCCAGCAAGATGTCACTCACCACATTGATGCTGTCCACAGGCATCGCCTTGCTTTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | AGCATCCCTCTTTCCCTCATTTCACATCCACTCAGTTCAGAACCCTaGTGGCTCTACCCCGCCATCACCACTGGGGCTGAAGCCACATCA | + |
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Preference number: 5 (lower is better) Translates to: SIPLSLISHPLSSEP*WLYPAITTGAEATS Trigger: TGATGTGGCTTCAGCCCCAGTGGTGATGGCGGGGTAGAGCCAGCAGGGTTCTGAACTGAGTGGATGTGAAATGAGGGAAAGAGGGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 90 bp | GAATCTTCCCTGAGATTGCGATGCCAGTGGGCCTTCCTGGGTGGATaGGTCTTTCATCTCCATGCTGCGTTCTCATCCCAGCTCACAACC | + |
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Preference number: 5 (lower is better) Translates to: ESSLRLRCQWAFLGG*VFHLHAAFSSQLTT Trigger: GGTTGTGAGCTGGGATGAGAACGCAGCATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCACTGGCATCGCAATCTCAGGGAAGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 90 bp | CCTGGCCCTGTCATGCCAGAGAGGAATATCGGTGAAGCTGCCGGATaGCGTCACCGCGGGAAGAACAATTGGATGATGACAATCGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PGPVMPERNIGEAAG*RHRGKNNWMMTIEG Trigger: TCCTTCGATTGTCATCATCCAATTGTTCTTCCCGCGGTGACGCCATCCGGCAGCTTCACCGATATTCCTCTCTGGCATGACAGGGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | AGAGCTGCAAAAGCAAGGCGATGCCTGTGGACAGCATCAATGTGGTaGGTGACATCTTGCTGGGTCCAAGGTGCTGTCTGTGTGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RAAKARRCLWTASMW*VTSCWVQGAVCVAG Trigger: ACCTGCCACACAGACAGCACCTTGGACCCAGCAAGATGTCACTCACCACATTGATGCTGTCCACAGGCATCGCCTTGCTTTTGCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 90 bp | CACCAGGCCGAAAGTATAACCCTAGGATGTGGTAGAACTGGGCTTTaGCACGAAGGCCTCAAAGGCCTGCCTGAGACGTCTGGACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: HQAESITLGCGRTGL*HEGLKGLPETSGLC Trigger: ACAGAGTCCAGACGTCTCAGGCAGGCCTTTGAGGCCTTCGTGTCAAAGCCCAGTTCTACCACATCCTAGGGTTATACTTTCGGCCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 90 bp | GAGGTCAAGGCCTGGGGTCTTCGATGTCTTCATGTCTCCAGCAGCTaGCGCACAGCAGGCCCTGCTTCCATTGTTTTAATGCTTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: EVKAWGLRCLHVSSS*RTAGPASIVLMLPD Trigger: ATCTGGAAGCATTAAAACAATGGAAGCAGGGCCTGCTGTGCGCCAGCTGCTGGAGACATGAAGACATCGAAGACCCCAGGCCTTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS CCA 90 bp | TGCTGTTCCAAGCACGTTCCAGGTGTCAGCTCTTTATCCTCCCCCTaGAGCCTGCAAAGCTCAACCTGGCCATCTACTCCTTCATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CCSKHVPGVSSLSSP*SLQSSTWPSTPSCC Trigger: ACAGCATGAAGGAGTAGATGGCCAGGTTGAGCTTTGCAGGCTCCAGGGGGAGGATAAAGAGCTGACACCTGGAACGTGCTTGGAACAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS GCA 90 bp | CAGAAGGCCAAAGGGCCTTGGCCAAATTCCCTCCATCCATGTCTGTaGCTCAGTTTCCTCCTCTGCAGAATAGAGATCTCTAAGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: QKAKGPWPNSLHPCL*LSFLLCRIEISKAA Trigger: AGCCGCCTTAGAGATCTCTATTCTGCAGAGGAGGAAACTGAGGCACAGACATGGATGGAGGGAATTTGGCCAAGGCCCTTTGGCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | GAAGGTGAAAGATCTTGTCCCAGTCTTCCTGTTTTTGTGCACAGTTaGCTCAGATGGGCACTGATAACGCGGCTGAGGGCTGGTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: EGERSCPSLPVFVHS*LRWALITRLRAGPA Trigger: TGCAGGACCAGCCCTCAGCCGCGTTATCAGTGCCCATCTGAGTCAACTGTGCACAAAAACAGGAAGACTGGGACAAGATCTTTCACCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | CCTCAACAGATTTCATCACCGACAGCAGTGTTCCTTAGGCTGATCTaGTGCAGATCCTTTGAAAAGATTCCCGTGGGTTCCTGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PQQISSPTAVFLRLI*CRSFEKIPVGSWCW Trigger: CCAACACCAGGAACCCACGGGAATCTTTTCAAAGGATCTGCATCAGATCAGCCTAAGGAACACTGCTGTCGGTGATGAAATCTGTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | AGAGGTCAGCAGGTCCTCTTTAACCCCCGTACAGTTTCCTATGGCTaGTGTGACAAATACCACAATTGCAGTGGCTTAAAACAGCACACG | + |
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Preference number: 5 (lower is better) Translates to: RGQQVLFNPRTVSYG*CDKYHNCSGLKQHT Trigger: CGTGTGCTGTTTTAAGCCACTGCAATTGTGGTATTTGTCACAGCAGCCATAGGAAACTGTACGGGGGTTAAAGAGGACCTGCTGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 90 bp | CGAATCCTCAACAGATTTCATCACCGACAGCAGTGTTCCTTAGGCTaGTCTGATGCAGATCCTTTGAAAAGATTCCCGTGGGTTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RILNRFHHRQQCSLG*SDADPLKRFPWVPG Trigger: ACCAGGAACCCACGGGAATCTTTTCAAAGGATCTGCATCAGATCAGCCTAAGGAACACTGCTGTCGGTGATGAAATCTGTTGAGGATTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | CGTCACCGCGGGAAGAACAATTGGATGATGACAATCGAAGGAAGGTaGAAGATCTTGTCCCAGTCTTCCTGTTTTTGTGCACAGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: RHRGKNNWMMTIEGR*KILSQSSCFCAQLT Trigger: AGTCAACTGTGCACAAAAACAGGAAGACTGGGACAAGATCTTTCACCTTCCTTCGATTGTCATCATCCAATTGTTCTTCCCGCGGTGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | ATGGGTCAATATTGGTTCCTCAATTGTAACAAATGTACCACAAGATaGAAGATGTTAGTCACAGAGGAAACTGTGTGTGTGTTTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MGQYWFLNCNKCTTR*KMLVTEETVCVFGK Trigger: CTTCCCAAACACACACACAGTTTCCTCTGTGACTAACATCTTGCATCTTGTGGTACATTTGTTACAATTGAGGAACCAATATTGACCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | GTACGTCCAGATAGCGGAATATTATTATTCAGTGCTAAGGAGAAATaGGCTCTTAAGTCGCTGAAAGACAGGAAGAGTAACTACACATTA | + |
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Preference number: 5 (lower is better) Translates to: VRPDSGILLFSAKEK*ALKSLKDRKSNYTL Trigger: TAATGTGTAGTTACTCTTCCTGTCTTTCAGCGACTTAAGAGCTCATTTCTCCTTAGCACTGAATAATAATATTCCGCTATCTGGACGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 90 bp | TTTGGGAAGGTGGGATATGGGAATTCTGCACTTTCTGTTCAGTTTTaGAGTGAACCTAAAACTGCTCTAAGGAATCATCTAATCATTGAT | + |
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Preference number: 5 (lower is better) Translates to: FGKVGYGNSALSVQF*SEPKTALRNHLIID Trigger: ATCAATGATTAGATGATTCCTTAGAGCAGTTTTAGGTTCACTGCAAAACTGAACAGAAAGTGCAGAATTCCCATATCCCACCTTCCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | GAATATTATTATTCAGTGCTAAGGAGAAATGAGCTCTTAAGTCGCTaGAAGACAGGAAGAGTAACTACACATTACTCAGTGAAAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: EYYYSVLRRNELLSR*KTGRVTTHYSVKEA Trigger: GGCTTCTTTCACTGAGTAATGTGTAGTTACTCTTCCTGTCTTTCAGCGACTTAAGAGCTCATTTCTCCTTAGCACTGAATAATAATATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 90 bp | GTCATTATACATTTATCCAAAGCCACAGAATCACCACACCAACAGTaGCTGCTTATGTCACCTACTGACTTTATAATAATGGGTCAATAT | + |
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Preference number: 5 (lower is better) Translates to: VIIHLSKATESPHQQ*LLMSPTDFIIMGQY Trigger: ATATTGACCCATTATTATAAAGTCAGTAGGTGACATAAGCAGTCACTGTTGGTGTGGTGATTCTGTGGCTTTGGATAAATGTATAATGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | CTGCAGGCAGGACCACGGGAGCCCTGGCGGAGCACCTaGACTGGGCCTCCTGGCTTCAGGAAGCAGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQAGPREPWRST*TGPPGFRKQSG Trigger: GCCACTCTGCTTCCTGAAGCCAGGAGGCCCAGTTCAGGTGCTCCGCCAGGGCTCCCGTGGTCCTGCCTGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CCA 72 bp | GGCAGGACCACGGGAGCCCTGGCGGAGCACCTGAACTaGGCCTCCTGGCTTCAGGAAGCAGAGTGGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRTTGALAEHLN*ASWLQEAEWQQ Trigger: CTGCTGCCACTCTGCTTCCTGAAGCCAGGAGGCCCAGTTCAGGTGCTCCGCCAGGGCTCCCGTGGTCCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CAA 72 bp | GGGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTaGCCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAGFCWRLREEA*PFLASRGRPCS Trigger: GGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CAA 90 bp | GGTGGCAGCGGGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTaGCCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCCTTGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSGAGFCWRLREEA*PFLASRGRPCSLAH Trigger: ATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS GCA 72 bp | GGGCTGGGTTCTGCTGGAGGCTCCGGGAAGAGGCCTTaGCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLGSAGGSGKRP*PFWLPEAAHAP Trigger: AGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGAACCCAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | GGAATCGGACACGGTGTCACCGTTCTGCAGTCGAGGTaGCAGCGGGGCTGGGTTCTGCTGGAGGCTCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GIGHGVTVLQSR*QRGWVLLEAPG Trigger: TCCCGGAGCCTCCAGCAGAACCCAGCCCCGCTGCCACCTCGACTGCAGAACGGTGACACCGTGTCCGATTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 72 bp | TGGTGGGGATGCAGGACGGGATGGTCGTGGCTGCACTaGCCGAGCACCTGCTCAACCCTCCCCATCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WWGCRTGWSWLH*PSTCSTLPITG Trigger: CCCTGTGATGGGGAGGGTTGAGCAGGTGCTCGGTCAGTGCAGCCACGACCATCCCGTCCTGCATCCCCACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | GGGTTGAGGGGTGGCATGAGACCCTCTTCCTGCCACTaGGCTGGGGCTGGAGTCCTGGCCCAGAAGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLRGGMRPSSCH*AGAGVLAQKAK Trigger: TTTGGCCTTCTGGGCCAGGACTCCAGCCCCAGCCCAGTGGCAGGAAGAGGGTCTCATGCCACCCCTCAACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 72 bp | GAGCAGGGCCTGGCTGGAGTGGGCGCTCCACACAGATaGGTGCGGCACATGCAGGAATGGGTGAGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EQGLAGVGAPHR*VRHMQEWVRGG Trigger: GCCTCCTCTCACCCATTCCTGCATGTGCCGCACCAATCTGTGTGGAGCGCCCACTCCAGCCAGGCCCTGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS GCA 72 bp | TGGGACCAGGCCAGGGGAGAGGAGGTTCGAGGCCTGTaGCGTGCATGCAGGATTATCAGGGTTGAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WDQARGEEVRGL*RACRIIRVEGW Trigger: CCACCCCTCAACCCTGATAATCCTGCATGCACGGCACAGGCCTCGAACCTCCTCTCCCCTGGCCTGGTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS GCA 72 bp | GCCTCAAAGGCCTGCCTGAGACGTCTGGACTCTGTCTaGAGGCTGTGCTCTCAGAGGGCACATAGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASKACLRRLDSV*RLCSQRAHRGP Trigger: GGGGCCCCTATGTGCCCTCTGAGAGCACAGCCTGCAGACAGAGTCCAGACGTCTCAGGCAGGCCTTTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CAA 90 bp | TTGCTGATAGAGCAGGGCCTGGCTGGAGTGGGCGCTCCACACAGATaGGTGCGGCACATGCAGGAATGGGTGAGAGGAGGCTGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLIEQGLAGVGAPHR*VRHMQEWVRGGWQR Trigger: CCTCTGCCAGCCTCCTCTCACCCATTCCTGCATGTGCCGCACCAATCTGTGTGGAGCGCCCACTCCAGCCAGGCCCTGCTCTATCAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS TCA 72 bp | TGGTGGGGATGCAGGACGGGATGGTCGTGGCTGCACTaGCCGAGCACCTGCTGTTCCAAGCACGTTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WWGCRTGWSWLH*PSTCCSKHVPG Trigger: ACCTGGAACGTGCTTGGAACAGCAGGTGCTCGGTCAGTGCAGCCACGACCATCCCGTCCTGCATCCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644563.1 |
||
| CDS GCA 72 bp | GCCAGGGGAGAGGAGGTTCGAGGCCTGTGCCGTGCATaGAGGATTATCAGGGTTGAGGGGTGGCATGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: ARGEEVRGLCRA*RIIRVEGWHET Trigger: GGTCTCATGCCACCCCTCAACCCTGATAATCCTGCATGCACGGCACAGGCCTCGAACCTCCTCTCCCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CCA 72 bp | TCTGCTGGAGGCTCCGGGAAGAGGCCTTGCCCTTTCTaGCTTCCAGAGGCCGCCCATGCTCCTTGGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SAGGSGKRPCPF*LPEAAHAPWLI Trigger: TATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAAGGCCTCTTCCCGGAGCCTCCAGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CCA 72 bp | CTGTGCCGTGCATGCAGGATTATCAGGGTTGAGGGGTaGCATGAGACCCTCTTCCTGCCACTGGGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCRACRIIRVEG*HETLFLPLGWG Trigger: GCCCCAGCCCAGTGGCAGGAAGAGGGTCTCATGCCACCCCTCAACCCTGATAATCCTGCATGCACGGCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CAA 72 bp | CCTGGCGGGGGAGGCGATGTGTCAGGGAAGGATTTCTaGAGATGTCCTAGCCGCCCTAGTCCCCACGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGGGGDVSGKDF*RCPSRPSPHAA Trigger: AGCAGCGTGGGGACTAGGGCGGCTAGGACATCTCAAGAAATCCTTCCCTGACACATCGCCTCCCCCGCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 90 bp | GTCCAAGGTGCTGTCTGTGTGGCAGGTGAGGGACTGACGGACGGCTaGGGTGCCATTTCTTTGACGTGGGGCATTCAGTGCCACCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQGAVCVAGEGLTDG*GAISLTWGIQCHPS Trigger: GCTGGGGTGGCACTGAATGCCCCACGTCAAAGAAATGGCACCCAAGCCGTCCGTCAGTCCCTCACCTGCCACACAGACAGCACCTTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CAA 90 bp | CCACTGGGCTGGGGCTGGAGTCCTGGCCCAGAAGGCCAAAGGGCCTaGGCCAAATTCCCTCCATCCATGTCTGTGCCTCAGTTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGWGWSPGPEGQRA*AKFPPSMSVPQFPP Trigger: AGGAGGAAACTGAGGCACAGACATGGATGGAGGGAATTTGGCCAAGGCCCTTTGGCCTTCTGGGCCAGGACTCCAGCCCCAGCCCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 90 bp | CTGCTTAGACCTGGCGGGGGAGGCGATGTGTCAGGGAAGGATTTCTaGAGATGTCCTAGCCGCCCTAGTCCCCACGCTGCTGGACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRPGGGGDVSGKDF*RCPSRPSPHAAGQL Trigger: GAGCTGTCCAGCAGCGTGGGGACTAGGGCGGCTAGGACATCTCAAGAAATCCTTCCCTGACACATCGCCTCCCCCGCCAGGTCTAAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS TCA 72 bp | CCTGCTGTGCCGGGGTCTACCACTGGACTTTCCCAATaGCACTGTCAACTGGGGACCAGCGACTCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAVPGSTTGLSQ*HCQLGTSDSHQ Trigger: CTGGTGGGAGTCGCTGGTCCCCAGTTGACAGTGTCATTGGGAAAGTCCAGTGGTAGACCCCGGCACAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS TCA 72 bp | GGTGCAGAGTCTGGAAAGGGAGGTGGGGCTAAGCAATaGTACTGCTGCACTGCTGAGCGCCTGCTGTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GAESGKGGGAKQ*YCCTAERLLCR Trigger: CCGGCACAGCAGGCGCTCAGCAGTGCAGCAGTATCATTGCTTAGCCCCACCTCCCTTTCCAGACTCTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | TGGGCCTGGCCCTGTCATGCCAGAGAGGAATATCGGTaGAGCTGCCGGATGGCGTCACCGCGGGAAGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: WAWPCHAREEYR*SCRMASPREEQ Trigger: TTGTTCTTCCCGCGGTGACGCCATCCGGCAGCTTCACCGATATTCCTCTCTGGCATGACAGGGCCAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CCA 72 bp | CAGAGTGGCAGCAGAAGGCCTGGAGGAGAACCCCATTaGCCCTGTCGTCTGCCCACAGATGCTGTACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSGSRRPGGEPH*PCRLPTDAVLA Trigger: GGCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGGTTCTCCTCCAGGCCTTCTGCTGCCACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | GGGGCTGGAGTCCTGGCCCAGAAGGCCAAAGGGCCTTaGCCAAATTCCCTCCATCCATGTCTGTGCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GAGVLAQKAKGP*PNSLHPCLCLS Trigger: ACTGAGGCACAGACATGGATGGAGGGAATTTGGCCAAGGCCCTTTGGCCTTCTGGGCCAGGACTCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | GCACTGCTGAGCGCCTGCTGTGCCGGGGTCTACCACTaGACTTTCCCAATGACACTGTCAACTGGGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALLSACCAGVYH*TFPMTLSTGDQ Trigger: CTGGTCCCCAGTTGACAGTGTCATTGGGAAAGTCCAGTGGTAGACCCCGGCACAGCAGGCGCTCAGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 72 bp | GCAGAGTGGCAGCAGAAGGCCTGGAGGAGAACCCCATaGGCCCTGTCGTCTGCCCACAGATGCTGTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEWQQKAWRRTP*ALSSAHRCCTC Trigger: GCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGGTTCTCCTCCAGGCCTTCTGCTGCCACTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 72 bp | GCAGGGCTGCTCCCCTGTTGCCGCAAGTGCTGCATTTaGAGGAGTCATTTCCACGCCCCCGGCATAGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: AGLLPCCRKCCI*RSHFHAPGIVT Trigger: CGTGACTATGCCGGGGGCGTGGAAATGACTCCTCAAAATGCAGCACTTGCGGCAACAGGGGAGCAGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | TGCCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCCTTaGCTCATAGGTCCTCCTCCATCTCAAGCCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPFWLPEAAHAP*LIGPPPSQANS Trigger: GCTGTTGGCTTGAGATGGAGGAGGACCTATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | ATCTCCTGCTTCTTCCTGTGCAGAGCAGGGGTCAGATaGCAAAGCCTTCATGGCTCAGGTGTGGCTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISCFFLCRAGVR*QSLHGSGVAGG Trigger: GCCCCCAGCCACACCTGAGCCATGAAGGCTTTGCCATCTGACCCCTGCTCTGCACAGGAAGAAGCAGGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 72 bp | GGTGAGGGACTGACGGACGGCTTGGGTGCCATTTCTTaGACGTGGGGCATTCAGTGCCACCCCAGCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: GEGLTDGLGAIS*TWGIQCHPSHF Trigger: AAAGTGGCTGGGGTGGCACTGAATGCCCCACGTCAAAGAAATGGCACCCAAGCCGTCCGTCAGTCCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 72 bp | GCTGTCTGTGTGGCAGGTGAGGGACTGACGGACGGCTaGGGTGCCATTTCTTTGACGTGGGGCATTCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVCVAGEGLTDG*GAISLTWGIQC Trigger: GCACTGAATGCCCCACGTCAAAGAAATGGCACCCAAGCCGTCCGTCAGTCCCTCACCTGCCACACAGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 90 bp | GAGGAGAACCCCATTGGCCCTGTCGTCTGCCCACAGATGCTGTACTaGCCTCCTGACCTCAAATATTGGCTAGGGCAGGCAGAGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EENPIGPVVCPQMLY*PPDLKYWLGQAEGS Trigger: TGACCCCTCTGCCTGCCCTAGCCAATATTTGAGGTCAGGAGGCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGGTTCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | AAGTCCCCTTTGTGGTGGAGGTCTCACTGTCAAGGGTaGCGGGTTAGGATGGGGCATCTTTGCGGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KSPLWWRSHCQG*RVRMGHLCGRH Trigger: GTGCCTCCCGCAAAGATGCCCCATCCTAACCCGTCACCCTTGACAGTGAGACCTCCACCACAAAGGGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 72 bp | CCCTGTCGTCTGCCCACAGATGCTGTACTTGCCTCCTaGCCTCAAATATTGGCTAGGGCAGGCAGAGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PCRLPTDAVLAS*PQILARAGRGV Trigger: GACCCCTCTGCCTGCCCTAGCCAATATTTGAGGTCAGGAGGCAAGTACAGCATCTGTGGGCAGACGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | GAAGGCCTGGAGGAGAACCCCATTGGCCCTGTCGTCTaGCCACAGATGCTGTACTTGCCTCCTGACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: EGLEENPIGPVV*PQMLYLPPDLK Trigger: TTTGAGGTCAGGAGGCAAGTACAGCATCTGTGGGCAGACGACAGGGCCAATGGGGTTCTCCTCCAGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | TGCATCTGGCAACCACATAGCCCTGTGCCTATGCCCTaGAGAAAGGCTGGCTTCTCCGCCTCCTTGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CIWQPHSPVPMP*RKAGFSASLSP Trigger: AGGAGACAAGGAGGCGGAGAAGCCAGCCTTTCTGCAGGGCATAGGCACAGGGCTATGTGGTTGCCAGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | GGGATAAGCAAGGTCCTTCCAGAAGGTCCAAGTTCATaGTGGGGATGCAGGACGGGATGGTCGTGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GISKVLPEGPSS*WGCRTGWSWLH Trigger: GTGCAGCCACGACCATCCCGTCCTGCATCCCCACCATGAACTTGGACCTTCTGGAAGGACCTTGCTTATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CCA 72 bp | TCCCTGGAGGACTACCCCAACTCCTCGTTGGCCTCCTaGCTTCCATCGTGGTCTCTCTCCAGTCTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLEDYPNSSLAS*LPSWSLSSLFS Trigger: TGAGAAGAGACTGGAGAGAGACCACGATGGAAGCCAGGAGGCCAACGAGGAGTTGGGGTAGTCCTCCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | ATCATGTCTCCCTGGAGGACTACCCCAACTCCTCGTTaGCCTCCTGGCTTCCATCGTGGTCTCTCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: IMSPWRTTPTPR*PPGFHRGLSPV Trigger: GACTGGAGAGAGACCACGATGGAAGCCAGGAGGCCAACGAGGAGTTGGGGTAGTCCTCCAGGGAGACATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 72 bp | TTGCCCTTTCTGGCTTCCAGAGGCCGCCCATGCTCCTaGGCTCATAGGTCCTCCTCCATCTCAAGCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LPFLASRGRPCS*AHRSSSISSQQ Trigger: CTGTTGGCTTGAGATGGAGGAGGACCTATGAGCCAAGGAGCATGGGCGGCCTCTGGAAGCCAGAAAGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS GCA 72 bp | GTGGGCCTTCCTGGGTGGATGCGTCTTTCATCTCCATaGTGCGTTCTCATCCCAGCTCACAACCCACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGLPGWMRLSSP*CVLIPAHNPQH Trigger: ATGCTGTGGGTTGTGAGCTGGGATGAGAACGCAGCATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS GCA 72 bp | CTGAGATTGCGATGCCAGTGGGCCTTCCTGGGTGGATaGGTCTTTCATCTCCATGCTGCGTTCTCATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRLRCQWAFLGG*VFHLHAAFSSQ Trigger: CTGGGATGAGAACGCAGCATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCACTGGCATCGCAATCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 72 bp | TTCTGTGCATCTGGCAACCACATAGCCCTGTGCCTATaGCCTGCAGAAAGGCTGGCTTCTCCGCCTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCASGNHIALCL*PAERLASPPPC Trigger: ACAAGGAGGCGGAGAAGCCAGCCTTTCTGCAGGGCATAGGCACAGGGCTATGTGGTTGCCAGATGCACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS GCA 72 bp | AGGATTTGGGCCTCTCTGGCAGGGCTGCTCCCCTGTTaGCGCAAGTGCTGCATTTTGAGGAGTCATTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RIWASLAGLLPC*RKCCILRSHFH Trigger: GTGGAAATGACTCCTCAAAATGCAGCACTTGCGGCAACAGGGGAGCAGCCCTGCCAGAGAGGCCCAAATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CCA 72 bp | GGACTGACGGACGGCTTGGGTGCCATTTCTTTGACGTaGGGCATTCAGTGCCACCCCAGCCACTTTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLTDGLGAISLT*GIQCHPSHFLF Trigger: AAAGAGAAAGTGGCTGGGGTGGCACTGAATGCCCCACGTCAAAGAAATGGCACCCAAGCCGTCCGTCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CAA 72 bp | CAGGATTTGGGCCTCTCTGGCAGGGCTGCTCCCCTGTaGCCGCAAGTGCTGCATTTTGAGGAGTCATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QDLGLSGRAAPL*PQVLHFEESFP Trigger: TGGAAATGACTCCTCAAAATGCAGCACTTGCGGCAACAGGGGAGCAGCCCTGCCAGAGAGGCCCAAATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
||
| CDS CAA 90 bp | CCTCTCCCACTGGCCACCTCAACCCTCCCCATCACAGGGTGTGTTTaGCAGTCTCCTTGTTTGTTTCTTCCACCAAACTGGGGGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLPLATSTLPITGCV*QSPCLFLPPNWGLL Trigger: CAAGAGCCCCCAGTTTGGTGGAAGAAACAAACAAGGAGACTGCAAAACACACCCTGTGATGGGGAGGGTTGAGGTGGCCAGTGGGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644563.1 |
||
| CDS TCA 72 bp | CAAGGCGATGCCTGTGGACAGCATCAATGTGGTGAGTaGCATCTTGCTGGGTCCAAGGTGCTGTCTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGDACGQHQCGE*HLAGSKVLSVW Trigger: CCACACAGACAGCACCTTGGACCCAGCAAGATGTCACTCACCACATTGATGCTGTCCACAGGCATCGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS GCA 72 bp | CTTTCCCTCATTTCACATCCACTCAGTTCAGAACCCTaGTGGCTCTACCCCGCCATCACCACTGGGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLISHPLSSEP*WLYPAITTGAE Trigger: TTCAGCCCCAGTGGTGATGGCGGGGTAGAGCCAGCAGGGTTCTGAACTGAGTGGATGTGAAATGAGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
||
| CDS CCA 72 bp | GCCTGGGGTCTTCGATGTCTTCATGTCTCCAGCAGCTaGCGCACAGCAGGCCCTGCTTCCATTGTTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: AWGLRCLHVSSS*RTAGPASIVLM Trigger: CATTAAAACAATGGAAGCAGGGCCTGCTGTGCGCCAGCTGCTGGAGACATGAAGACATCGAAGACCCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644563.1 |
||
| CDS CCA 72 bp | AAGCACGTTCCAGGTGTCAGCTCTTTATCCTCCCCCTaGAGCCTGCAAAGCTCAACCTGGCCATCTACTCCT | + |
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Preference number: 6 (lower is better) Translates to: KHVPGVSSLSSP*SLQSSTWPSTP Trigger: AGGAGTAGATGGCCAGGTTGAGCTTTGCAGGCTCCAGGGGGAGGATAAAGAGCTGACACCTGGAACGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS CCA 72 bp | TCAGCCTGGGAATCTTCCCTGAGATTGCGATGCCAGTaGGCCTTCCTGGGTGGATGCGTCTTTCATCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SAWESSLRLRCQ*AFLGGCVFHLH Trigger: ATGGAGATGAAAGACGCATCCACCCAGGAAGGCCCACTGGCATCGCAATCTCAGGGAAGATTCCCAGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS GCA 72 bp | TTCCAGGTGTCAGCTCTTTATCCTCCCCCTGGAGCCTaGAAAGCTCAACCTGGCCATCTACTCCTTCATGCT | + |
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Preference number: 6 (lower is better) Translates to: FQVSALYPPPGA*KAQPGHLLLHA Trigger: AGCATGAAGGAGTAGATGGCCAGGTTGAGCTTTGCAGGCTCCAGGGGGAGGATAAAGAGCTGACACCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS GCA 72 bp | CCATCTCCTCCTCTCAGGGTCCTTAACCTTCATGCCTaGAAAGTCCCCTTTGTGGTGGAGGTCTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSPPLRVLNLHA*KVPFVVEVSLS Trigger: TGACAGTGAGACCTCCACCACAAAGGGGACTTTGCAGGCATGAAGGTTAAGGACCCTGAGAGGAGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | GCCTGGGGTCTTCGATGTCTTCATGTCTCCAGCAGCTaGCGCACAGCAGGCCCTCAGAAAAAGTGGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: AWGLRCLHVSSS*RTAGPQKKWIK Trigger: TTTTATCCACTTTTTCTGAGGGCCTGCTGTGCGCCAGCTGCTGGAGACATGAAGACATCGAAGACCCCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CCA 72 bp | GTCATGCCAGAGAGGAATATCGGTGAAGCTGCCGGATaGCGTCACCGCGGGAAGAACAATTGGATGATGACA | + |
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Preference number: 6 (lower is better) Translates to: VMPERNIGEAAG*RHRGKNNWMMT Trigger: TGTCATCATCCAATTGTTCTTCCCGCGGTGACGCCATCCGGCAGCTTCACCGATATTCCTCTCTGGCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | AAAGCAAGGCGATGCCTGTGGACAGCATCAATGTGGTaGGTGACATCTTGCTGGGTCCAAGGTGCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KARRCLWTASMW*VTSCWVQGAVC Trigger: ACAGACAGCACCTTGGACCCAGCAAGATGTCACTCACCACATTGATGCTGTCCACAGGCATCGCCTTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | CTCCTTGTTTGTTTCTTCCACCAAACTGGGGGCTCTTaGAGGTCAAGGCCTGGGGTCTTCGATGTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LLVCFFHQTGGS*RSRPGVFDVFM Trigger: CATGAAGACATCGAAGACCCCAGGCCTTGACCTCCAAGAGCCCCCAGTTTGGTGGAAGAAACAAACAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 72 bp | CTGGCCACCTCAACCCTCCCCATCACAGGGTGTGTTTaGCAGTCTCCTTGTTTGTTTCTTCCACCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LATSTLPITGCV*QSPCLFLPPNW Trigger: CCAGTTTGGTGGAAGAAACAAACAAGGAGACTGCAAAACACACCCTGTGATGGGGAGGGTTGAGGTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644563.1 |
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| CDS TCA 72 bp | GAAAGTATAACCCTAGGATGTGGTAGAACTGGGCTTTaGCACGAAGGCCTCAAAGGCCTGCCTGAGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: ESITLGCGRTGL*HEGLKGLPETS Trigger: AGACGTCTCAGGCAGGCCTTTGAGGCCTTCGTGTCAAAGCCCAGTTCTACCACATCCTAGGGTTATACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | AGATCTTGTCCCAGTCTTCCTGTTTTTGTGCACAGTTaGCTCAGATGGGCACTGATAACGCGGCTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSCPSLPVFVHS*LRWALITRLRA Trigger: AGCCCTCAGCCGCGTTATCAGTGCCCATCTGAGTCAACTGTGCACAAAAACAGGAAGACTGGGACAAGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS CAA 72 bp | TCTCCTTGTTTGTTTCTTCCACCAAACTGGGGGCTCTaGGAGGTCAAGGCCTGGGGTCTTCGATGTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SPCLFLPPNWGL*EVKAWGLRCLH Trigger: ATGAAGACATCGAAGACCCCAGGCCTTGACCTCCAAGAGCCCCCAGTTTGGTGGAAGAAACAAACAAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CCA 72 bp | AATGTTGACCAGGTCTGGTCAAGGATGTGTGGATGCTaGGATAAGCAAGGTCCTTCCAGAAGGTCCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: NVDQVWSRMCGC*DKQGPSRRSKF Trigger: GAACTTGGACCTTCTGGAAGGACCTTGCTTATCCCAGCATCCACACATCCTTGACCAGACCTGGTCAACATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 72 bp | GCATGTTTTCGTCGCTTTCTTCATAACTGCCCAAACTaGGAAGCAACCCAGGTGCCCTTCACAAAGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: ACFRRFLHNCPN*EATQVPFTKRM Trigger: CATCCGCTTTGTGAAGGGCACCTGGGTTGCTTCCAAGTTTGGGCAGTTATGAAGAAAGCGACGAAAACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | AGGTTTTCGGCATGTTTTCGTCGCTTTCTTCATAACTaGCCAAACTTGGAAGCAACCCAGGTGCCCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RFSACFRRFLHN*PNLEATQVPFT Trigger: TGTGAAGGGCACCTGGGTTGCTTCCAAGTTTGGGCAGTTATGAAGAAAGCGACGAAAACATGCCGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | AACAGATTTCATCACCGACAGCAGTGTTCCTTAGGCTaGTCTGATGCAGATCCTTTGAAAAGATTCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: NRFHHRQQCSLG*SDADPLKRFPW Trigger: CCACGGGAATCTTTTCAAAGGATCTGCATCAGATCAGCCTAAGGAACACTGCTGTCGGTGATGAAATCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | CAGGTCCTCTTTAACCCCCGTACAGTTTCCTATGGCTaGTGTGACAAATACCACAATTGCAGTGGCTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: QVLFNPRTVSYG*CDKYHNCSGLK Trigger: TTTTAAGCCACTGCAATTGTGGTATTTGTCACAGCAGCCATAGGAAACTGTACGGGGGTTAAAGAGGACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS CAA 90 bp | AGGTTTTCGGCATGTTTTCGTCGCTTTCTTCATAACTGCCCAAACTaGGAAGCAACCCAGGTGCCCTTCACAAAGCGGATGATAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: RFSACFRRFLHNCPN*EATQVPFTKRMINK Trigger: TTTATTTATCATCCGCTTTGTGAAGGGCACCTGGGTTGCTTCCAAGTTTGGGCAGTTATGAAGAAAGCGACGAAAACATGCCGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | ACAGTTTCCTATGGCTGCTGTGACAAATACCACAATTaGAGTGGCTTAAAACAGCACACGTGTTATCTCACG | + |
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Preference number: 6 (lower is better) Translates to: TVSYGCCDKYHN*SGLKQHTCYLT Trigger: CGTGAGATAACACGTGTGCTGTTTTAAGCCACTGCAATTGTGGTATTTGTCACAGCAGCCATAGGAAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000642898.1 ENST00000644563.1 |
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| CDS TCA 72 bp | TATTCAGTGCTAAGGAGAAATGAGCTCTTAAGTCGCTaGAAGACAGGAAGAGTAACTACACATTACTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: YSVLRRNELLSR*KTGRVTTHYSV Trigger: CACTGAGTAATGTGTAGTTACTCTTCCTGTCTTTCAGCGACTTAAGAGCTCATTTCTCCTTAGCACTGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | GTGGGATATGGGAATTCTGCACTTTCTGTTCAGTTTTaGAGTGAACCTAAAACTGCTCTAAGGAATCATCTA | + |
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Preference number: 6 (lower is better) Translates to: VGYGNSALSVQF*SEPKTALRNHL Trigger: TAGATGATTCCTTAGAGCAGTTTTAGGTTCACTGCAAAACTGAACAGAAAGTGCAGAATTCCCATATCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | CATTTATCCAAAGCCACAGAATCACCACACCAACAGTaGCTGCTTATGTCACCTACTGACTTTATAATAATG | + |
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Preference number: 6 (lower is better) Translates to: HLSKATESPHQQ*LLMSPTDFIIM Trigger: CATTATTATAAAGTCAGTAGGTGACATAAGCAGTCACTGTTGGTGTGGTGATTCTGTGGCTTTGGATAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS TCA 72 bp | GATAGCGGAATATTATTATTCAGTGCTAAGGAGAAATaGGCTCTTAAGTCGCTGAAAGACAGGAAGAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: DSGILLFSAKEK*ALKSLKDRKSN Trigger: GTTACTCTTCCTGTCTTTCAGCGACTTAAGAGCTCATTTCTCCTTAGCACTGAATAATAATATTCCGCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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| CDS GCA 72 bp | TATTGGTTCCTCAATTGTAACAAATGTACCACAAGATaGAAGATGTTAGTCACAGAGGAAACTGTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: YWFLNCNKCTTR*KMLVTEETVCV Trigger: CACACACACAGTTTCCTCTGTGACTAACATCTTGCATCTTGTGGTACATTTGTTACAATTGAGGAACCAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642898.1 |
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