Pregenerated sensors for LINC01485 (Homo sapiens)
Ensembl gene IDs: ENSG00000254211Ensembl transcript IDs: ENST00000518675.1, ENST00000520324.5, ENST00000522571.1, ENST00000522731.1, ENST00000523617.6, ENST00000653465.1, ENST00000659366.1, ENST00000662807.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTCGGCCCACGTGGCCAAGCTCTACCCGGGTCCCACAAAGCAGCTaGCCTTTGTCCAGCCTTCAGGGCTGGAGCACCCACTGGCCATGT | + |
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Preference number: 5 (lower is better) Translates to: TRPTWPSSTRVPQSS*PLSSLQGWSTHWPC Trigger: ACATGGCCAGTGGGTGCTCCAGCCCTGAAGGCTGGACAAAGGGCAGCTGCTTTGTGGGACCCGGGTAGAGCTTGGCCACGTGGGCCGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662807.1 |
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| CDS CCA 90 bp | AAGACCCTCCTCAGCAAAGCCCGAAAGTGCTCTCTCTCCCCACGCTaGAGACCAGTGTGCTCTCCAGACAGCAGGCTTTCCCTGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: KTLLSKARKCSLSPR*RPVCSPDSRLSLAG Trigger: CCCTGCCAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCGGGCTTTGCTGAGGAGGGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS CCA 90 bp | TTTCCTGCACCGGGAGAAAAACAGAAACCGGGCACTCGGCCCACGTaGCCAAGCTCTACCCGGGTCCCACAAAGCAGCTGCCCTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FPAPGEKQKPGTRPT*PSSTRVPQSSCPLS Trigger: GGACAAAGGGCAGCTGCTTTGTGGGACCCGGGTAGAGCTTGGCCACGTGGGCCGAGTGCCCGGTTTCTGTTTTTCTCCCGGTGCAGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653465.1 ENST00000662807.1 |
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| CDS GCA 90 bp | AGCAAAGCCCGAAAGTGCTCTCTCTCCCCACGCTGGAGACCAGTGTaGTCTCCAGACAGCAGGCTTTCCCTCCTCACACGATGGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SKARKCSLSPRWRPV*SPDSRLSLLTRWQS Trigger: GCTCTGCCATCGTGTGAGGAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCGGGCTTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS GCA 90 bp | TTCCCAGAATGTGACAGACTCCTCACACCTCTGCACCTCTGCACCTaGTGCTTCCCTCCGCCAGAGACGCTGTTCCCCCACCATCACTTC | + |
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Preference number: 5 (lower is better) Translates to: FPECDRLLTPLHLCT*CFPPPETLFPHHHF Trigger: GAAGTGATGGTGGGGGAACAGCGTCTCTGGCGGAGGGAAGCAGCAGGTGCAGAGGTGCAGAGGTGTGAGGAGTCTGTCACATTCTGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CCA 90 bp | AAGACCCTCCTCAGCAAAGCCCGAAAGTGCTCTCTCTCCCCACGCTaGAGACCAGTGTGCTCTCCAGACAGCAGGCTTTCCCTCCTCACA | + |
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Preference number: 5 (lower is better) Translates to: KTLLSKARKCSLSPR*RPVCSPDSRLSLLT Trigger: TGTGAGGAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCGGGCTTTGCTGAGGAGGGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS GCA 90 bp | AGCAAAGCCCGAAAGTGCTCTCTCTCCCCACGCTGGAGACCAGTGTaGTCTCCAGACAGCAGGCTTTCCCTGGCAGGGTCACAAACCAAA | + |
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Preference number: 5 (lower is better) Translates to: SKARKCSLSPRWRPV*SPDSRLSLAGSQTK Trigger: TTTGGTTTGTGACCCTGCCAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCGGGCTTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS GCA 90 bp | AAGCTCATGATTGGAGAACACCCTTCGAGAGAGGAGGCTCCTGCATaGAGAAGATCCTTCCTGAGCACCTTCTGCCCTCCATGTCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: KLMIGEHPSREEAPA*RRSFLSTFCPPCPS Trigger: GCTCGGACATGGAGGGCAGAAGGTGCTCAGGAAGGATCTTCTGCATGCAGGAGCCTCCTCTCTCGAAGGGTGTTCTCCAATCATGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS GCA 90 bp | CCAAATGCCACCTTGCAATTTGCTGGGTCATCCTGGAACAAGTGCTaGTGGGGCTCCCTGTCCCTACCCAAGCAGAGGAAAGTTCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PNATLQFAGSSWNKC*WGSLSLPKQRKVQD Trigger: GTCCTGAACTTTCCTCTGCTTGGGTAGGGACAGGGAGCCCCAGCAGCACTTGTTCCAGGATGACCCAGCAAATTGCAAGGTGGCATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS CCA 90 bp | AGACCAGTGTGCTCTCCAGACAGCAGGCTTTCCCTCCTCACACGATaGCAGAGCCTCCTAATGACCTGGAAGGCCAGATCAGAATGGCTA | + |
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Preference number: 5 (lower is better) Translates to: RPVCSPDSRLSLLTR*QSLLMTWKARSEWL Trigger: TAGCCATTCTGATCTGGCCTTCCAGGTCATTAGGAGGCTCTGCCATCGTGTGAGGAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS GCA 90 bp | ATCAGGGCTGGGATTGAGCCTCAACTCTGCCACCCACTAGTTCTGTaGATTTGGGCAGCACAGTCAACTCTACTGAGCCTCAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IRAGIEPQLCHPLVL*IWAAQSTLLSLSCS Trigger: GGAGCAACTGAGGCTCAGTAGAGTTGACTGTGCTGCCCAAATGCACAGAACTAGTGGGTGGCAGAGTTGAGGCTCAATCCCAGCCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | AATGCCACCTTGCAATTTGCTGGGTCATCCTGGAACAAGTGCTGCTaGGGCTCCCTGTCCCTACCCAAGCAGAGGAAAGTTCAGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: NATLQFAGSSWNKCC*GSLSLPKQRKVQDS Trigger: ACTGTCCTGAACTTTCCTCTGCTTGGGTAGGGACAGGGAGCCCCAGCAGCACTTGTTCCAGGATGACCCAGCAAATTGCAAGGTGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS CCA 90 bp | GCTTGCCACGCTCACAATCTGCTCTTGTTGTGGGAGGATCTTGATTaGGCCTTCTTGTTGGCAGTACTTGAACCGGGGAGGCAGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ACHAHNLLLLWEDLD*AFLLAVLEPGRQRL Trigger: CAACCTCTGCCTCCCCGGTTCAAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520324.5 |
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| CDS TCA 90 bp | TGGAAGGCCAGGAAATCAATAGAGTCAGCACTAACCAGGCGGTTTTaGGCTTGTAGCCCCTGTCTTTGGTCTCCAGCAGGCCTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: WKARKSIESALTRRF*ACSPCLWSPAGLTS Trigger: GCTTGTGAGGCCTGCTGGAGACCAAAGACAGGGGCTACAAGCTCAAAACCGCCTGGTTAGTGCTGACTCTATTGATTTCCTGGCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS GCA 90 bp | CACTTCCTGATGAAAGCTGCCACACTCTGTGAAGCCAAGTACCCATaGTACTTTCTCAATATGGCTCCTCCCATGTCCCCTTCCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: HFLMKAATLCEAKYP*YFLNMAPPMSPSPS Trigger: GGATGGGGAAGGGGACATGGGAGGAGCCATATTGAGAAAGTAGCATGGGTACTTGGCTTCACAGAGTGTGGCAGCTTTCATCAGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS GCA 90 bp | GGATCTTCTAATAGATGCTTCAAAGGGAGCAGTTTCTATTTCCGGTaGCCACGGAGATCTCGAGGGAGATTTCTCCCCACCCCTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GSSNRCFKGSSFYFR*PRRSRGRFLPTPAL Trigger: CAGAGCAGGGGTGGGGAGAAATCTCCCTCGAGATCTCCGTGGGCACCGGAAATAGAAACTGCTCCCTTTGAAGCATCTATTAGAAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | CTGGAAGGCCAGATCAGAATGGCTAGACTCCTCGGAGTTTCACATTaGCATGCGGCAGCTACTTTCCCCGTTCTTCATGTTTTCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LEGQIRMARLLGVSH*HAAATFPVLHVFLH Trigger: GTGCAGGAAAACATGAAGAACGGGGAAAGTAGCTGCCGCATGCCAATGTGAAACTCCGAGGAGTCTAGCCATTCTGATCTGGCCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000522731.1 ENST00000653465.1 ENST00000662807.1 |
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| CDS CCA 90 bp | GCTGGGATTGAGCCTCAACTCTGCCACCCACTAGTTCTGTGCATTTaGGCAGCACAGTCAACTCTACTGAGCCTCAGTTGCTCCATCTAT | + |
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Preference number: 5 (lower is better) Translates to: AGIEPQLCHPLVLCI*AAQSTLLSLSCSIY Trigger: ATAGATGGAGCAACTGAGGCTCAGTAGAGTTGACTGTGCTGCCCAAATGCACAGAACTAGTGGGTGGCAGAGTTGAGGCTCAATCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 90 bp | GCTAAGGTCAGTCCTCCTCGGGCATGTAAACAGCAAATAAGCTCATaGTTGGAGAACACCCTTCGAGAGAGGAGGCTCCTGCATGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: AKVSPPRACKQQISS*LENTLRERRLLHAE Trigger: TTCTGCATGCAGGAGCCTCCTCTCTCGAAGGGTGTTCTCCAATCATGAGCTTATTTGCTGTTTACATGCCCGAGGAGGACTGACCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS GCA 90 bp | TTTGTCCTTCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTaGTCTTGTTGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FVLPVLSIELATLTI*SCCGRILIGPSCWQ Trigger: CTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGAAGGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS GCA 90 bp | CTGTGCCCAATCTCTCTTTGTCCTTCCAGTGCTCAGCATAGAGCTTaGCACGCTCACAATCTGCTCTTGTTGTGGGAGGATCTTGATTGG | + |
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Preference number: 5 (lower is better) Translates to: LCPISLCPSSAQHRA*HAHNLLLLWEDLDW Trigger: CCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGAAGGACAAAGAGAGATTGGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CCA 90 bp | AGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTTGTTGTaGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACTTGAACCG | + |
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Preference number: 5 (lower is better) Translates to: SAQHRACHAHNLLLL*EDLDWAFLLAVLEP Trigger: CGGTTCAAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520324.5 |
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| CDS CCA 90 bp | TCCTTGGCTGTAGCTGGATCCCATGACATTCTGGTGGGTCATCCATaGTCACATCCTCTCAGATGTGAGCTCTTCATCACCTGGATCAGT | + |
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Preference number: 5 (lower is better) Translates to: SLAVAGSHDILVGHP*SHPLRCELFITWIS Trigger: ACTGATCCAGGTGATGAAGAGCTCACATCTGAGAGGATGTGACCATGGATGACCCACCAGAATGTCATGGGATCCAGCTACAGCCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CCA 90 bp | CTGGAAGGCCAGATCAGAATGGCTAGACTCCTCGGAGTTTCACATTaGCATGCGGCAGCTACTTTCCCCGTTCTTCATGTTTTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LEGQIRMARLLGVSH*HAAATFPVLHVFLA Trigger: AGCAAGGAAAACATGAAGAACGGGGAAAGTAGCTGCCGCATGCCAATGTGAAACTCCGAGGAGTCTAGCCATTCTGATCTGGCCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS TCA 90 bp | ACCTTCCTCCTTTTGTTCTCCAAAGCACACCTTGCCTTGGTTACCTaGCCTTCACTAAGCTCAGCCCATATTTGGCCAAACCATCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: TFLLLFSKAHLALVT*PSLSSAHIWPNHLG Trigger: GCCCAGATGGTTTGGCCAAATATGGGCTGAGCTTAGTGAAGGTCAGGTAACCAAGGCAAGGTGTGCTTTGGAGAACAAAAGGAGGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 90 bp | CTCTCAGATGTGAGCTCTTCATCACCTGGATCAGTGAGAAGTCTGTaGCCAATCTCTCTTTGTCCTTCCAGTGCTCAGCATAGAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LSDVSSSSPGSVRSL*PISLCPSSAQHRAC Trigger: GCAAGCTCTATGCTGAGCACTGGAAGGACAAAGAGAGATTGGGCACAGACTTCTCACTGATCCAGGTGATGAAGAGCTCACATCTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CCA 90 bp | ACACGATGGCAGAGCCTCCTAATGACCTGGAAGGCCAGATCAGAATaGCTAGACTCCATTAACATTAGGACTGTGCTGCAAACTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: TRWQSLLMTWKARSE*LDSINIRTVLQTDH Trigger: GTGGTCAGTTTGCAGCACAGTCCTAATGTTAATGGAGTCTAGCCATTCTGATCTGGCCTTCCAGGTCATTAGGAGGCTCTGCCATCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518675.1 |
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| CDS CCA 90 bp | GGTCATCCATGGTCACATCCTCTCAGATGTGAGCTCTTCATCACCTaGATCAGTGAGAAGTCTGTGCCCAATCTCTCTTTGTCCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GHPWSHPLRCELFIT*ISEKSVPNLSLSFQ Trigger: CTGGAAGGACAAAGAGAGATTGGGCACAGACTTCTCACTGATCCAGGTGATGAAGAGCTCACATCTGAGAGGATGTGACCATGGATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS TCA 90 bp | ACAGCACTTGGAAGGAAATCCACACTCCTTATCAACACTTCACCTTaGCTTTCAGTCTGTGTGATCTGGCCCTGCTTGCCTCTCCTACCT | + |
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Preference number: 5 (lower is better) Translates to: TALGRKSTLLINTSP*LSVCVIWPCLPLLP Trigger: AGGTAGGAGAGGCAAGCAGGGCCAGATCACACAGACTGAAAGTCAAGGTGAAGTGTTGATAAGGAGTGTGGATTTCCTTCCAAGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 90 bp | TTACCCAGGAGAGTAAAGGTTGAGGCCCTCCAGCAAGACAGATCATaGCCACTTACTCTGCAGAAACTTCCTCCCTTTCCAATAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LPRRVKVEALQQDRS*PLTLQKLPPFPITG Trigger: TCCTGTTATTGGAAAGGGAGGAAGTTTCTGCAGAGTAAGTGGGCATGATCTGTCTTGCTGGAGGGCCTCAACCTTTACTCTCCTGGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 90 bp | ACCATGGAAATATCATTGTCTCCTCTTACCCAGGAGAGTAAAGGTTaGGGCCCTCCAGCAAGACAGATCATGCCCACTTACTCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TMEISLSPLTQESKG*GPPARQIMPTYSAE Trigger: TTCTGCAGAGTAAGTGGGCATGATCTGTCTTGCTGGAGGGCCTCAACCTTTACTCTCCTGGGTAAGAGGAGACAATGATATTTCCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | TGTGTCTTCCAGAAGGAGTTTAGCCATCCAAGGAAGGTTTGGAAGTaGAAGGCCAGGAAATCAATAGAGTCAGCACTAACCAGGCGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CVFQKEFSHPRKVWK*KARKSIESALTRRF Trigger: AAACCGCCTGGTTAGTGCTGACTCTATTGATTTCCTGGCCTTCCACTTCCAAACCTTCCTTGGATGGCTAAACTCCTTCTGGAAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS TCA 90 bp | GTCCATATATGTATTACCTGTCTTTCCCTAAACAACTTCCCACCCTaGGCTTGTTCCTGTCCATATTCCCAGTACCCAGAATGGTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VHICITCLSLNNFPP*ACSCPYSQYPEWCL Trigger: CAAGCACCATTCTGGGTACTGGGAATATGGACAGGAACAAGCTCAGGGTGGGAAGTTGTTTAGGGAAAGACAGGTAATACATATATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 90 bp | TTACCCCAGTGTCTAGAGAGGAGGAAAGAAATCTCTCTCCTTAGCTaGAACCTTAGTAAGAGCTCAGTCCAGAGCTTGCTTGAAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LPQCLERRKEISLLS*NLSKSSVQSLLESK Trigger: TTTACTTTCAAGCAAGCTCTGGACTGAGCTCTTACTAAGGTTTCAGCTAAGGAGAGAGATTTCTTTCCTCCTCTCTAGACACTGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | AAAGGTTGTATCATCTCTGAGTTTGCTGTAATGGCCCTTAGCTTGTaGGCTTCTCAGCAGAATGCTCTGAAGACCATGGAAATATCATTG | + |
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Preference number: 5 (lower is better) Translates to: KGCIISEFAVMALSL*ASQQNALKTMEISL Trigger: CAATGATATTTCCATGGTCTTCAGAGCATTCTGCTGAGAAGCCCACAAGCTAAGGGCCATTACAGCAAACTCAGAGATGATACAACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | GCCTCTTCACCAACTGATTCCCTGACATTCTCACATGCGTTCAGTTaGTGCTTAATAGGAACTGAATTGAAATCTCATGGTGATCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: ASSPTDSLTFSHAFS*CLIGTELKSHGDLL Trigger: TAACAGATCACCATGAGATTTCAATTCAGTTCCTATTAAGCACCAACTGAACGCATGTGAGAATGTCAGGGAATCAGTTGGTGAAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 90 bp | TCTTCACCAACTGATTCCCTGACATTCTCACATGCGTTCAGTTGGTaGTTAATAGGAACTGAATTGAAATCTCATGGTGATCTGTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSPTDSLTFSHAFSW*LIGTELKSHGDLLE Trigger: CTCTAACAGATCACCATGAGATTTCAATTCAGTTCCTATTAAGCACCAACTGAACGCATGTGAGAATGTCAGGGAATCAGTTGGTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 90 bp | ATATTTGTGGAATGGAATGAGCGGATGTTGTGTAAACATTCATTGTaGGTGTACGTATTTAGTTCTACTAACCAGAACACTGGGGGACCA | + |
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Preference number: 5 (lower is better) Translates to: IFVEWNERMLCKHSL*VYVFSSTNQNTGGP Trigger: TGGTCCCCCAGTGTTCTGGTTAGTAGAACTAAATACGTACACGCACAATGAATGTTTACACAACATCCGCTCATTCCATTCCACAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 90 bp | ATAACTGATTTTTCCCTGCTATGGTGTGACCACCTTGACTTTGAATaGAAGTGTAGCATTCCCTTGTATGGGTGGATCAAAATTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ITDFSLLWCDHLDFE*KCSIPLYGWIKISF Trigger: AAAAGAAATTTTGATCCACCCATACAAGGGAATGCTACACTTCCATTCAAAGTCAAGGTGGTCACACCATAGCAGGGAAAAATCAGTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 90 bp | AAACTAGTCCATCTTGCATGCCTTTCTTCATGGCATTGTGTGCCATaGTCAGAAATTATCTTGTGTATTCTTAAGTCCATATATGTATTA | + |
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Preference number: 5 (lower is better) Translates to: KLVHLACLSSWHCVP*SEIILCILKSIYVL Trigger: TAATACATATATGGACTTAAGAATACACAAGATAATTTCTGAGCATGGCACACAATGCCATGAAGAAAGGCATGCAAGATGGACTAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 72 bp | ACGTGGCCAAGCTCTACCCGGGTCCCACAAAGCAGCTaGCCTTTGTCCAGCCTTCAGGGCTGGAGCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: TWPSSTRVPQSS*PLSSLQGWSTH Trigger: GTGGGTGCTCCAGCCCTGAAGGCTGGACAAAGGGCAGCTGCTTTGTGGGACCCGGGTAGAGCTTGGCCACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662807.1 |
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| CDS CCA 72 bp | CCGGGAGAAAAACAGAAACCGGGCACTCGGCCCACGTaGCCAAGCTCTACCCGGGTCCCACAAAGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGEKQKPGTRPT*PSSTRVPQSSC Trigger: GCAGCTGCTTTGTGGGACCCGGGTAGAGCTTGGCCACGTGGGCCGAGTGCCCGGTTTCTGTTTTTCTCCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653465.1 ENST00000662807.1 |
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| CDS CAA 72 bp | CCAAGCTCTACCCGGGTCCCACAAAGCAGCTGCCCTTaGTCCAGCCTTCAGGGCTGGAGCACCCACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSSTRVPQSSCP*SSLQGWSTHWP Trigger: TGGCCAGTGGGTGCTCCAGCCCTGAAGGCTGGACAAAGGGCAGCTGCTTTGTGGGACCCGGGTAGAGCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662807.1 |
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| CDS GCA 72 bp | CGAAAGTGCTCTCTCTCCCCACGCTGGAGACCAGTGTaGTCTCCAGACAGCAGGCTTTCCCTGGCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RKCSLSPRWRPV*SPDSRLSLAGS Trigger: TGACCCTGCCAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS GCA 72 bp | CGAAAGTGCTCTCTCTCCCCACGCTGGAGACCAGTGTaGTCTCCAGACAGCAGGCTTTCCCTCCTCACACGA | + |
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Preference number: 6 (lower is better) Translates to: RKCSLSPRWRPV*SPDSRLSLLTR Trigger: TCGTGTGAGGAGGGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS CCA 72 bp | CTCAGCAAAGCCCGAAAGTGCTCTCTCTCCCCACGCTaGAGACCAGTGTGCTCTCCAGACAGCAGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSKARKCSLSPR*RPVCSPDSRLS Trigger: GGAAAGCCTGCTGTCTGGAGAGCACACTGGTCTCCAGCGTGGGGAGAGAGAGCACTTTCGGGCTTTGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000522571.1 ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS TCA 72 bp | CGAGAGAGGAGGCTCCTGCATGCAGAAGATCCTTCCTaGGCACCTTCTGCCCTCCATGTCCGAGCTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: RERRLLHAEDPS*APSALHVRAAH Trigger: ATGTGCAGCTCGGACATGGAGGGCAGAAGGTGCTCAGGAAGGATCTTCTGCATGCAGGAGCCTCCTCTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS CCA 72 bp | TGCTCTCCAGACAGCAGGCTTTCCCTCCTCACACGATaGCAGAGCCTCCTAATGACCTGGAAGGCCAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: CSPDSRLSLLTR*QSLLMTWKARS Trigger: TGATCTGGCCTTCCAGGTCATTAGGAGGCTCTGCCATCGTGTGAGGAGGGAAAGCCTGCTGTCTGGAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS GCA 72 bp | CATGATTGGAGAACACCCTTCGAGAGAGGAGGCTCCTaGATGCAGAAGATCCTTCCTGAGCACCTTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HDWRTPFERGGS*MQKILPEHLLP Trigger: GGGCAGAAGGTGCTCAGGAAGGATCTTCTGCATGCAGGAGCCTCCTCTCTCGAAGGGTGTTCTCCAATCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS GCA 72 bp | GGGATTGAGCCTCAACTCTGCCACCCACTAGTTCTGTaGATTTGGGCAGCACAGTCAACTCTACTGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GIEPQLCHPLVL*IWAAQSTLLSL Trigger: GAGGCTCAGTAGAGTTGACTGTGCTGCCCAAATGCACAGAACTAGTGGGTGGCAGAGTTGAGGCTCAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | AGGTCTTCACCCTTGTCATCATCAACTCGAGTAGGCTaGGGAGGAGGAAAAGGAGTGGTTGGTCCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSPLSSSTRVG*GGGKGVVGPAL Trigger: GAGAGCAGGACCAACCACTCCTTTTCCTCCTCCTCAGCCTACTCGAGTTGATGATGACAAGGGTGAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | GGGCCTTCTTGTTGGCAGTACCTTAACTACAAAGAGTaGGAGTGGAGAAGGGGATCTCTGGGGTGCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPSCWQYLNYKE*EWRRGSLGCCH Trigger: GTGACAGCACCCCAGAGATCCCCTTCTCCACTCTCACTCTTTGTAGTTAAGGTACTGCCAACAAGAAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS GCA 72 bp | CCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTaGTCTTGTTGTGGGAGGATCTTGATTGGGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PVLSIELATLTI*SCCGRILIGPS Trigger: AGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CCA 72 bp | GCTCACAATCTGCTCTTGTTGTGGGAGGATCTTGATTaGGCCTTCTTGTTGGCAGTACTTGAACCGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AHNLLLLWEDLD*AFLLAVLEPGR Trigger: CCTCCCCGGTTCAAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520324.5 |
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| CDS CAA 90 bp | CCTTCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTaGTTGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSAQHRACHAHNLL*LWEDLDWAFLLAVL Trigger: GAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000523617.6 ENST00000662807.1 |
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| CDS CAA 90 bp | CCTTCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTaGTTGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSAQHRACHAHNLL*LWEDLDWAFLLAVP Trigger: AGGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS CAA 90 bp | CCTTCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTaGTTGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: PSSAQHRACHAHNLL*LWEDLDWAFLLAVL Trigger: AAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520324.5 |
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| CDS TCA 72 bp | AGTCCTCCTCGGGCATGTAAACAGCAAATAAGCTCATaGTTGGAGAACACCCTTCGAGAGAGGAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPPRACKQQISS*LENTLRERRLL Trigger: CAGGAGCCTCCTCTCTCGAAGGGTGTTCTCCAATCATGAGCTTATTTGCTGTTTACATGCCCGAGGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522731.1 |
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| CDS TCA 72 bp | AGGAAATCAATAGAGTCAGCACTAACCAGGCGGTTTTaGGCTTGTAGCCCCTGTCTTTGGTCTCCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKSIESALTRRF*ACSPCLWSPAG Trigger: GCCTGCTGGAGACCAAAGACAGGGGCTACAAGCTCAAAACCGCCTGGTTAGTGCTGACTCTATTGATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS GCA 72 bp | GGGAAGGTGAAGGCCGTTTGGTCATATATTCCCAGCTaGGTGACCTTGGGACTTTCAGTTTCCTCAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GKVKAVWSYIPS*VTLGLSVSSAE Trigger: TTCAGCTGAGGAAACTGAAAGTCCCAAGGTCACGCAGCTGGGAATATATGACCAAACGGCCTTCACCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS GCA 72 bp | AATAGATGCTTCAAAGGGAGCAGTTTCTATTTCCGGTaGCCACGGAGATCTCGAGGGAGATTTCTCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: NRCFKGSSFYFR*PRRSRGRFLPT Trigger: GGTGGGGAGAAATCTCCCTCGAGATCTCCGTGGGCACCGGAAATAGAAACTGCTCCCTTTGAAGCATCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 72 bp | TTTGAGATAATCAGGGCTGGGATTGAGCCTCAACTCTaGCACCCACTAGTTCTGTGCATTTGGGCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FEIIRAGIEPQL*HPLVLCIWAAQ Trigger: CTGTGCTGCCCAAATGCACAGAACTAGTGGGTGGCAGAGTTGAGGCTCAATCCCAGCCCTGATTATCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | GTAGCTGGATCCCATGACATTCTGGTGGGTCATCCATaGTCACATCCTCTCAGATGTGAGCTCTTCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: VAGSHDILVGHP*SHPLRCELFIT Trigger: GGTGATGAAGAGCTCACATCTGAGAGGATGTGACCATGGATGACCCACCAGAATGTCATGGGATCCAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CAA 72 bp | CAGCATAGAGCTTGCCACGCTCACAATCTGCTCTTGTaGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QHRACHAHNLLL*WEDLDWAFLLA Trigger: TGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CAA 72 bp | GCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTaGTTGTGGGAGGATCTTGATTGGGCCTTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AQHRACHAHNLL*LWEDLDWAFLL Trigger: CAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CAA 90 bp | TCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTTGTaGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSAQHRACHAHNLLL*WEDLDWAFLLAVLE Trigger: TTCAAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520324.5 |
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| CDS CAA 90 bp | TCCAGTGCTCAGCATAGAGCTTGCCACGCTCACAATCTGCTCTTGTaGTGGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSAQHRACHAHNLLL*WEDLDWAFLLAVLF Trigger: AAAGAGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATGCTGAGCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000523617.6 ENST00000662807.1 |
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| CDS GCA 72 bp | GTGAGCTCTTCATCACCTGGATCAGTGAGAAGTCTGTaGCCAATCTCTCTTTGTCCTTCCAGTGCTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSSSSPGSVRSL*PISLCPSSAQH Trigger: ATGCTGAGCACTGGAAGGACAAAGAGAGATTGGGCACAGACTTCTCACTGATCCAGGTGATGAAGAGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS GCA 72 bp | ATGAAAGCTGCCACACTCTGTGAAGCCAAGTACCCATaGTACTTTCTCAATATGGCTCCTCCCATGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: MKAATLCEAKYP*YFLNMAPPMSP Trigger: AGGGGACATGGGAGGAGCCATATTGAGAAAGTAGCATGGGTACTTGGCTTCACAGAGTGTGGCAGCTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS GCA 72 bp | AGAGTAAAGGTTGAGGCCCTCCAGCAAGACAGATCATaGCCACTTACTCTGCAGAAACTTCCTCCCTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVKVEALQQDRS*PLTLQKLPPFP Trigger: TGGAAAGGGAGGAAGTTTCTGCAGAGTAAGTGGGCATGATCTGTCTTGCTGGAGGGCCTCAACCTTTACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | CAGATCAGAATGGCTAGACTCCTCGGAGTTTCACATTaGCATGCGGCAGCTACTTTCCCCGTTCTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: QIRMARLLGVSH*HAAATFPVLHV Trigger: AACATGAAGAACGGGGAAAGTAGCTGCCGCATGCCAATGTGAAACTCCGAGGAGTCTAGCCATTCTGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000522571.1 ENST00000522731.1 ENST00000523617.6 ENST00000653465.1 ENST00000662807.1 |
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| CDS CCA 72 bp | CATAGAGCTTGCCACGCTCACAATCTGCTCTTGTTGTaGGAGGATCTTGATTGGGCCTTCTTGTTGGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: HRACHAHNLLLL*EDLDWAFLLAV Trigger: TACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGGCAAGCTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS TCA 72 bp | CCACCATCACTTCCTGATGAAAGCTGCCACACTCTGTaGAGCCAAGTACCCATGCTACTTTCTCAATATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPSLPDESCHTL*SQVPMLLSQYG Trigger: GCCATATTGAGAAAGTAGCATGGGTACTTGGCTTCACAGAGTGTGGCAGCTTTCATCAGGAAGTGATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS TCA 72 bp | ATATCATTGTCTCCTCTTACCCAGGAGAGTAAAGGTTaGGGCCCTCCAGCAAGACAGATCATGCCCACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: ISLSPLTQESKG*GPPARQIMPTY Trigger: GTAAGTGGGCATGATCTGTCTTGCTGGAGGGCCTCAACCTTTACTCTCCTGGGTAAGAGGAGACAATGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | TGGCCCTTAGCTTGTGGGCTTCTCAGCAGAATGCTCTaGAGACCATGGAAATATCATTGTCTCCTCTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: WPLACGLLSRML*RPWKYHCLLLP Trigger: GGGTAAGAGGAGACAATGATATTTCCATGGTCTTCAGAGCATTCTGCTGAGAAGCCCACAAGCTAAGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | GGAAGGAAATCCACACTCCTTATCAACACTTCACCTTaGCTTTCAGTCTGTGTGATCTGGCCCTGCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRKSTLLINTSP*LSVCVIWPCLP Trigger: AGGCAAGCAGGGCCAGATCACACAGACTGAAAGTCAAGGTGAAGTGTTGATAAGGAGTGTGGATTTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | CCACGCTCACAATCTGCTCTTGTTGTGGGAGGATCTTaGTTGGGCCTTCTTGTTGGCAGTACCTTAACTACA | + |
|
Preference number: 6 (lower is better) Translates to: PRSQSALVVGGS*LGLLVGSTLTT Trigger: TGTAGTTAAGGTACTGCCAACAAGAAGGCCCAATCAAGATCCTCCCACAACAAGAGCAGATTGTGAGCGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS GCA 72 bp | CACCAATGGCATTTCCCCTCAAGGCCTTCGCCTCTTTaGCTGAAATGCTCTGGATTTCATGACTCTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HQWHFPSRPSPL*LKCSGFHDSGN Trigger: ATTTCCAGAGTCATGAAATCCAGAGCATTTCAGGCAAAGAGGCGAAGGCCTTGAGGGGAAATGCCATTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | CAGAGCCTCCTAATGACCTGGAAGGCCAGATCAGAATaGCTAGACTCCATTAACATTAGGACTGTGCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSLLMTWKARSE*LDSINIRTVLQ Trigger: TTGCAGCACAGTCCTAATGTTAATGGAGTCTAGCCATTCTGATCTGGCCTTCCAGGTCATTAGGAGGCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518675.1 |
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| CDS CCA 72 bp | TGGTCACATCCTCTCAGATGTGAGCTCTTCATCACCTaGATCAGTGAGAAGTCTGTGCCCAATCTCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSHPLRCELFIT*ISEKSVPNLSL Trigger: CAAAGAGAGATTGGGCACAGACTTCTCACTGATCCAGGTGATGAAGAGCTCACATCTGAGAGGATGTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520324.5 ENST00000523617.6 ENST00000659366.1 ENST00000662807.1 |
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| CDS CAA 72 bp | TACCTGTCTTTCCCTAAACAACTTCCCACCCTGAGCTaGTTCCTGTCCATATTCCCAGTACCCAGAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YLSFPKQLPTLS*FLSIFPVPRMV Trigger: CACCATTCTGGGTACTGGGAATATGGACAGGAACAAGCTCAGGGTGGGAAGTTGTTTAGGGAAAGACAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 72 bp | TTTCAGCGTGCAAGTCATGGCCGAAATGTCACCTCCTaGGATAGTCCCTCCATCTTCACGCACACTAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: FQRASHGRNVTS*DSPSIFTHTKL Trigger: TAGTTTAGTGTGCGTGAAGATGGAGGGACTATCCAAGGAGGTGACATTTCGGCCATGACTTGCACGCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | AATGGCATTTCCCCTCAAGGCCTTCGCCTCTTTGCCTaGAATGCTCTGGATTTCATGACTCTGGAAATCATG | + |
|
Preference number: 6 (lower is better) Translates to: NGISPQGLRLFA*NALDFMTLEIM Trigger: CATGATTTCCAGAGTCATGAAATCCAGAGCATTTCAGGCAAAGAGGCGAAGGCCTTGAGGGGAAATGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | CAGAAGGAGTTTAGCCATCCAAGGAAGGTTTGGAAGTaGAAGGCCAGGAAATCAATAGAGTCAGCACTAACC | + |
|
Preference number: 6 (lower is better) Translates to: QKEFSHPRKVWK*KARKSIESALT Trigger: GGTTAGTGCTGACTCTATTGATTTCCTGGCCTTCCACTTCCAAACCTTCCTTGGATGGCTAAACTCCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS CCA 72 bp | TTAACTACAAAGAGTGAGAGTGGAGAAGGGGATCTCTaGGGTGCTGTCACTCAAAGAAGTGAGGTATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTTKSESGEGDL*GAVTQRSEVYQ Trigger: CTGGTATACCTCACTTCTTTGAGTGACAGCACCCCAGAGATCCCCTTCTCCACTCTCACTCTTTGTAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659366.1 |
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| CDS CAA 72 bp | CATTTGAAACATCATTTAGGGGAAGGTGAAGGCCGTTaGGTCATATATTCCCAGCTGCGTGACCTTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: HLKHHLGEGEGR*VIYSQLRDLGT Trigger: AGTCCCAAGGTCACGCAGCTGGGAATATATGACCAAACGGCCTTCACCTTCCCCTAAATGATGTTTCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS CAA 72 bp | TGTATCATCTCTGAGTTTGCTGTAATGGCCCTTAGCTaGTGGGCTTCTCAGCAGAATGCTCTGAAGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: CIISEFAVMALS*WASQQNALKTM Trigger: CATGGTCTTCAGAGCATTCTGCTGAGAAGCCCACAAGCTAAGGGCCATTACAGCAAACTCAGAGATGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 90 bp | AGCCCATATTTGGCCAAACCATCTGGGCCTCTGCTCAACGTGCCTTaGCTTTGTTACCTGTTCCACATCATTTTTCAAGGTCTAGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SPYLAKPSGPLLNVP*LCYLFHIIFQGLAL Trigger: TAAAGCTAGACCTTGAAAAATGATGTGGAACAGGTAACAAAGCAAAGGCACGTTGAGCAGAGGCCCAGATGGTTTGGCCAAATATGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | TGTATTACCTGTCTTTCCCTAAACAACTTCCCACCCTaGGCTTGTTCCTGTCCATATTCCCAGTACCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CITCLSLNNFPP*ACSCPYSQYPE Trigger: TTCTGGGTACTGGGAATATGGACAGGAACAAGCTCAGGGTGGGAAGTTGTTTAGGGAAAGACAGGTAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 72 bp | TCCATCTTCACGCACACTAAACTAGTCCATCTTGCATaGCTTTCTTCATGGCATTGTGTGCCATGCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIFTHTKLVHLA*LSSWHCVPCSE Trigger: TTCTGAGCATGGCACACAATGCCATGAAGAAAGGCATGCAAGATGGACTAGTTTAGTGTGCGTGAAGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 72 bp | CTGATTTTTCCCTGCTATGGTGTGACCACCTTGACTTaGAATGGAAGTGTAGCATTCCCTTGTATGGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LIFPCYGVTTLT*NGSVAFPCMGG Trigger: TCCACCCATACAAGGGAATGCTACACTTCCATTCAAAGTCAAGGTGGTCACACCATAGCAGGGAAAAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 90 bp | CAGAAAGGTTGTATCATCTCTGAGTTTGCTGTAATGGCCCTTAGCTaGTGGGCTTCTCAGCAGAATGCTCTGAAGACCATGGAAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: QKGCIISEFAVMALS*WASQQNALKTMEIS Trigger: TGATATTTCCATGGTCTTCAGAGCATTCTGCTGAGAAGCCCACAAGCTAAGGGCCATTACAGCAAACTCAGAGATGATACAACCTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 90 bp | TATATGTATTACCTGTCTTTCCCTAAACAACTTCCCACCCTGAGCTaGTTCCTGTCCATATTCCCAGTACCCAGAATGGTGCTTGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: YMYYLSFPKQLPTLS*FLSIFPVPRMVLGI Trigger: TATGCCAAGCACCATTCTGGGTACTGGGAATATGGACAGGAACAAGCTCAGGGTGGGAAGTTGTTTAGGGAAAGACAGGTAATACATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | TGTCTAGAGAGGAGGAAAGAAATCTCTCTCCTTAGCTaGAACCTTAGTAAGAGCTCAGTCCAGAGCTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLERRKEISLLS*NLSKSSVQSLL Trigger: AAGCAAGCTCTGGACTGAGCTCTTACTAAGGTTTCAGCTAAGGAGAGAGATTTCTTTCCTCCTCTCTAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | TGTTGGTGTATTTCCTTCCGGATACATAAAGAGAGTTaGACCCTGAACGATATGGAAGTTGGGGTGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: CWCISFRIHKES*TLNDMEVGVLT Trigger: GGTCAACACCCCAACTTCCATATCGTTCAGGGTTCAACTCTCTTTATGTATCCGGAAGGAAATACACCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | TTTTCCCTGCTATGGTGTGACCACCTTGACTTTGAATaGAAGTGTAGCATTCCCTTGTATGGGTGGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: FSLLWCDHLDFE*KCSIPLYGWIK Trigger: TTTGATCCACCCATACAAGGGAATGCTACACTTCCATTCAAAGTCAAGGTGGTCACACCATAGCAGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 72 bp | ATTGCCTACATAGAACCCGGTAGCTTTCTACAGCACTaGGAAGGAAATCCACACTCCTTATCAACACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: IAYIEPGSFLQH*EGNPHSLSTLH Trigger: GTGAAGTGTTGATAAGGAGTGTGGATTTCCTTCCAAGTGCTGTAGAAAGCTACCGGGTTCTATGTAGGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 72 bp | CCCATAACTCTGATTACCAGCCTCTCCGTCAGCATTTaGCCATCTAACCACTTTGTGTTGTTTATATACCTT | + |
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Preference number: 6 (lower is better) Translates to: PITLITSLSVSI*PSNHFVLFIYL Trigger: AAGGTATATAAACAACACAAAGTGGTTAGATGGGCAAATGCTGACGGAGAGGCTGGTAATCAGAGTTATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 72 bp | TCACCTGTAAGTGGACCTGTGCAGTTCAAACCTGTGTaGTTTGAAGGTCAACTGTATGATGATTGCCTACAT | + |
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Preference number: 6 (lower is better) Translates to: SPVSGPVQFKPV*FEGQLYDDCLH Trigger: ATGTAGGCAATCATCATACAGTTGACCTTCAAACAACACAGGTTTGAACTGCACAGGTCCACTTACAGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 90 bp | TTATTTTGTCATTTGAAACATCATTTAGGGGAAGGTGAAGGCCGTTaGGTCATATATTCCCAGCTGCGTGACCTTGGGACTTTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LFCHLKHHLGEGEGR*VIYSQLRDLGTFSF Trigger: GAAACTGAAAGTCCCAAGGTCACGCAGCTGGGAATATATGACCAAACGGCCTTCACCTTCCCCTAAATGATGTTTCAAATGACAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522571.1 |
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| CDS TCA 72 bp | CTCAAGGGCAAATGGGTAGTAAGAGAAGAAAGAAGATaGGTCAGGATTGAACAGAGGCTTACTCTGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LKGKWVVREERR*VRIEQRLTLFK Trigger: TTTGAACAGAGTAAGCCTCTGTTCAATCCTGACTCATCTTCTTTCTTCTCTTACTACCCATTTGCCCTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS TCA 72 bp | GGAAGAGAAAGTATATTTACGTTCACTACGCAGAAGTaGCTCAGCATAAAGGTCTTCACCCTTGTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: GRESIFTFTTQK*LSIKVFTLVII Trigger: GATGATGACAAGGGTGAAGACCTTTATGCTGAGTCACTTCTGCGTAGTGAACGTAAATATACTTTCTCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | CCAACTGATTCCCTGACATTCTCACATGCGTTCAGTTaGTGCTTAATAGGAACTGAATTGAAATCTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: PTDSLTFSHAFS*CLIGTELKSHG Trigger: ACCATGAGATTTCAATTCAGTTCCTATTAAGCACCAACTGAACGCATGTGAGAATGTCAGGGAATCAGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | GTTCCTGTCCATATTCCCAGTACCCAGAATGGTGCTTaGCATACAGCACATCTTCATTACATAGTTAATAAG | + |
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Preference number: 6 (lower is better) Translates to: VPVHIPSTQNGA*HTAHLHYIVNK Trigger: CTTATTAACTATGTAATGAAGATGTGCTGTATGCCAAGCACCATTCTGGGTACTGGGAATATGGACAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CCA 72 bp | CACACTAAACTAGTCCATCTTGCATGCCTTTCTTCATaGCATTGTGTGCCATGCTCAGAAATTATCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HTKLVHLACLSS*HCVPCSEIILC Trigger: ACACAAGATAATTTCTGAGCATGGCACACAATGCCATGAAGAAAGGCATGCAAGATGGACTAGTTTAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS GCA 72 bp | ACTGATTCCCTGACATTCTCACATGCGTTCAGTTGGTaGTTAATAGGAACTGAATTGAAATCTCATGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TDSLTFSHAFSW*LIGTELKSHGD Trigger: ATCACCATGAGATTTCAATTCAGTTCCTATTAAGCACCAACTGAACGCATGTGAGAATGTCAGGGAATCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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| CDS CAA 72 bp | TCTTCATGGCATTGTGTGCCATGCTCAGAAATTATCTaGTGTATTCTTAAGTCCATATATGTATTACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSWHCVPCSEII*CILKSIYVLPV Trigger: GACAGGTAATACATATATGGACTTAAGAATACACAAGATAATTTCTGAGCATGGCACACAATGCCATGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653465.1 |
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