Pregenerated sensors for LINC01483 (Homo sapiens)
Ensembl gene IDs: ENSG00000227517Ensembl transcript IDs: ENST00000433856.5, ENST00000587241.1, ENST00000588185.1, ENST00000591334.5, ENST00000659331.1, ENST00000665875.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGGAGTTGGATGCTCTAAGCTGGGGTCTCAAGAGCAGGTTGGCTaGGGCAGCTCTGCTCCATATGTGCTCCATCTTTCTCCTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: LGVGCSKLGSQEQVG*GSSAPYVLHLSPGL Trigger: TAGCCCAGGAGAAAGATGGAGCACATATGGAGCAGAGCTGCCCCAGCCAACCTGCTCTTGAGACCCCAGCTTAGAGCATCCAACTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS CCA 90 bp | TCACTCATGCTTCTGGGTGTTAGCTGGGAGTTGGATGCTCTAAGCTaGGGTCTCAAGAGCAGGTTGGCTGGGGCAGCTCTGCTCCATATG | + |
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Preference number: 5 (lower is better) Translates to: SLMLLGVSWELDALS*GLKSRLAGAALLHM Trigger: CATATGGAGCAGAGCTGCCCCAGCCAACCTGCTCTTGAGACCCCAGCTTAGAGCATCCAACTCCCAGCTAACACCCAGAAGCATGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS TCA 90 bp | TCCCTCTGGCTTAGAGCGGCGTCCTTCGGGATCCTGCCGGGTCCCTaGAGACATTTGATTTTTCAATCGGTGATTCAGACCAACAATCCA | + |
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Preference number: 5 (lower is better) Translates to: SLWLRAASFGILPGP*RHLIFQSVIQTNNP Trigger: TGGATTGTTGGTCTGAATCACCGATTGAAAAATCAAATGTCTTCAGGGACCCGGCAGGATCCCGAAGGACGCCGCTCTAAGCCAGAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000587241.1 ENST00000591334.5 ENST00000659331.1 ENST00000665875.1 |
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| CDS TCA 90 bp | CCAACATTTCAGGCTTCGTTCTTGAGACTTGATTTGGGGCCCATGTaGGGACCCACCATGTTCTCTGTCCATGGTCCTCAGTATAAATGC | + |
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Preference number: 5 (lower is better) Translates to: PTFQASFLRLDLGPM*GPTMFSVHGPQYKC Trigger: GCATTTATACTGAGGACCATGGACAGAGAACATGGTGGGTCCTCACATGGGCCCCAAATCAAGTCTCAAGAACGAAGCCTGAAATGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587241.1 |
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| CDS TCA 90 bp | GAGAAACAGCTGTCACCGAAATTCCAACATTTCAGGCTTCGTTCTTaGGACTTGATTTGGGGCCCATGTGAGGACCCACCATGTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: EKQLSPKFQHFRLRS*DLIWGPCEDPPCSL Trigger: CAGAGAACATGGTGGGTCCTCACATGGGCCCCAAATCAAGTCTCAAGAACGAAGCCTGAAATGTTGGAATTTCGGTGACAGCTGTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587241.1 |
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| CDS TCA 90 bp | AAAAGTGATGGGCTATTACTTCTGAAAGTAGGTTATAAAAGGCTGTaGCTTCTATCCTGCTGGCACTCTCTTGCTCTTTCTCACTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KSDGLLLLKVGYKRL*LLSCWHSLALSHFL Trigger: GAGAAAGTGAGAAAGAGCAAGAGAGTGCCAGCAGGATAGAAGTCACAGCCTTTTATAACCTACTTTCAGAAGTAATAGCCCATCACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 90 bp | CCCTTGAGTTGTCTTAGTACCCTCATGAGGAGAAAGCGTTTTGGTTaGGTTTGTCTCCCACAAAAATGTAGAAGACCTTTGAAATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PLSCLSTLMRRKRFG*VCLPQKCRRPLKFL Trigger: AAGGAATTTCAAAGGTCTTCTACATTTTTGTGGGAGACAAACTCAACCAAAACGCTTTCTCCTCATGAGGGTACTAAGACAACTCAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 90 bp | TGTACGATCGAATGTTCAAATAAGGATGAGACACTGAAAGATTGGTaGGGCCATTCTACCTTAACCAACACTTCAATTGAGAGAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CTIECSNKDETLKDW*GHSTLTNTSIERES Trigger: TGACTCTCTCTCAATTGAAGTGTTGGTTAAGGTAGAATGGCCTCACCAATCTTTCAGTGTCTCATCCTTATTTGAACATTCGATCGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 90 bp | TTCCCACCATCAAAGTCTGAGCCTCCAATTTCTCCATTAACTCACTaGCGCTTCTTATTATCTGTCATTTTTATTATTCCCATCCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: FPPSKSEPPISPLTH*RFLLSVIFIIPILA Trigger: TGCTAGGATGGGAATAATAAAAATGACAGATAATAAGAAGCGTCAGTGAGTTAATGGAGAAATTGGAGGCTCAGACTTTGATGGTGGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 90 bp | ATTACTGAATCACTGGATAAGATTTGGAAAAAGTGGTGCTGTCATTaGCACACTATAAGACTGCAAATCTACTGTACGATCGAATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: ITESLDKIWKKWCCH*HTIRLQIYCTIECS Trigger: TGAACATTCGATCGTACAGTAGATTTGCAGTCTTATAGTGTGTCAATGACAGCACCACTTTTTCCAAATCTTATCCAGTGATTCAGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CCA 72 bp | ATTTTCCACTTCAGCCACAACACACACCGCTCCCTCTaGCTTAGAGCGGCGTCCTTCGGGATCCTGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: IFHFSHNTHRSL*LRAASFGILPG Trigger: ACCCGGCAGGATCCCGAAGGACGCCGCTCTAAGCCAGAGGGAGCGGTGTGTGTTGTGGCTGAAGTGGAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587241.1 ENST00000591334.5 ENST00000659331.1 ENST00000665875.1 |
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| CDS CCA 72 bp | CTTCTGGGTGTTAGCTGGGAGTTGGATGCTCTAAGCTaGGGTCTCAAGAGCAGGTTGGCTGGGGCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLGVSWELDALS*GLKSRLAGAAL Trigger: CAGAGCTGCCCCAGCCAACCTGCTCTTGAGACCCCAGCTTAGAGCATCCAACTCCCAGCTAACACCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS TCA 72 bp | CAGGCTTCGTTCTTGAGACTTGATTTGGGGCCCATGTaGGGACCCACCATGTTCTCTGTCCATGGTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QASFLRLDLGPM*GPTMFSVHGPQ Trigger: CTGAGGACCATGGACAGAGAACATGGTGGGTCCTCACATGGGCCCCAAATCAAGTCTCAAGAACGAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587241.1 |
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| CDS CAA 72 bp | TTACGCCTTGAGATGACCGCAGCCTTGGCTGATACCTaGATTGCAGCCTTGTATGAATCCCTGGGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRLEMTAALADT*IAALYESLGWR Trigger: CCTCCAGCCCAGGGATTCATACAAGGCTGCAATCAAGGTATCAGCCAAGGCTGCGGTCATCTCAAGGCGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CCA 72 bp | GGGCAGCTCTGCTCCATATGTGCTCCATCTTTCTCCTaGGCTAGCCTGGTCATGTTCTTCAAAGTCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: GQLCSICAPSFS*ASLVMFFKVRM Trigger: CATTCTGACTTTGAAGAACATGACCAGGCTAGCCCAGGAGAAAGATGGAGCACATATGGAGCAGAGCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS TCA 72 bp | CTGTCACCGAAATTCCAACATTTCAGGCTTCGTTCTTaGGACTTGATTTGGGGCCCATGTGAGGACCCACCA | + |
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Preference number: 6 (lower is better) Translates to: LSPKFQHFRLRS*DLIWGPCEDPP Trigger: TGGTGGGTCCTCACATGGGCCCCAAATCAAGTCTCAAGAACGAAGCCTGAAATGTTGGAATTTCGGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587241.1 |
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| CDS CCA 72 bp | GATACCTTGATTGCAGCCTTGTATGAATCCCTGGGCTaGAGGATCCAGTCAAGCCATTCCCAGATTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: DTLIAALYESLG*RIQSSHSQIPD Trigger: ATCAGGAATCTGGGAATGGCTTGACTGGATCCTCCAGCCCAGGGATTCATACAAGGCTGCAATCAAGGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CCA 72 bp | CACTGGACTCGGCTAGATGGTTTTATTGACCTTAAATaGAGTCACTCATGCTTCTGGGTGTTAGCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: HWTRLDGFIDLK*SHSCFWVLAGS Trigger: ACTCCCAGCTAACACCCAGAAGCATGAGTGACTCCATTTAAGGTCAATAAAACCATCTAGCCGAGTCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS TCA 72 bp | GCAGCTGTGCCATTTTACATTCCCACCATCAAAGTCTaGGCCTCCAATTTCTCCATTAACTCACTGACGCTT | + |
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Preference number: 6 (lower is better) Translates to: AAVPFYIPTIKV*ASNFSINSLTL Trigger: AAGCGTCAGTGAGTTAATGGAGAAATTGGAGGCTCAGACTTTGATGGTGGGAATGTAAAATGGCACAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 72 bp | CTCTCTGCTGTTACCCTGGATCATAAAGTTGCCCAGTaGGAAACAGCTGTCACCGAAATTCCAACATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LSAVTLDHKVAQ*ETAVTEIPTFQ Trigger: CTGAAATGTTGGAATTTCGGTGACAGCTGTTTCTCACTGGGCAACTTTATGATCCAGGGTAACAGCAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587241.1 |
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| CDS CCA 72 bp | TGCATCTGTGATCAACCAAGGGCTGGCTTATCTCACTaGACTCGGCTAGATGGTTTTATTGACCTTAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CICDQPRAGLSH*TRLDGFIDLKW Trigger: CCATTTAAGGTCAATAAAACCATCTAGCCGAGTCCAGTGAGATAAGCCAGCCCTTGGTTGATCACAGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588185.1 |
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| CDS TCA 72 bp | TTGCCCTGCCACAGAACGTGTGTTTCAAAGCTTAGCTaGGGCTCCAGAATCACAAGAAATGCCTTTATTACT | + |
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Preference number: 6 (lower is better) Translates to: LPCHRTCVSKLS*GSRITRNAFIT Trigger: AGTAATAAAGGCATTTCTTGTGATTCTGGAGCCTCAGCTAAGCTTTGAAACACACGTTCTGTGGCAGGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 72 bp | TTCAAGTTTATTCTCTCTCTCCTTTGGGCACCATCTTaGAGATACTCATCATCTGCCAGGGGATACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FKFILSLLWAPS*RYSSSARGYST Trigger: AGTGCTGTATCCCCTGGCAGATGATGAGTATCTTCAAGATGGTGCCCAAAGGAGAGAGAGAATAAACTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588185.1 ENST00000591334.5 |
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| CDS TCA 72 bp | TATTCTCTCTCTCCTTTGGGCACCAGTGAAAAGGTTTaGATTGTGTGGCCAGAGAGCAGACTGTATTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: YSLSPLGTSEKV*IVWPESRLYFQ Trigger: CTGAAAATACAGTCTGCTCTCTGGCCACACAATTCAAACCTTTTCACTGGTGCCCAAAGGAGAGAGAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665875.1 |
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| CDS TCA 72 bp | TGTTCAAGTTTATTCTCTCTCTCCTTTGGGCACCAGTaGAAAGGTTTGAATTGTGTGGCCAGAGAGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: CSSLFSLSFGHQ*KGLNCVAREQT Trigger: AGTCTGCTCTCTGGCCACACAATTCAAACCTTTTCACTGGTGCCCAAAGGAGAGAGAGAATAAACTTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665875.1 |
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| CDS TCA 72 bp | GGGCTATTACTTCTGAAAGTAGGTTATAAAAGGCTGTaGCTTCTATCCTGCTGGCACTCTCTTGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GLLLLKVGYKRL*LLSCWHSLALS Trigger: AGAAAGAGCAAGAGAGTGCCAGCAGGATAGAAGTCACAGCCTTTTATAACCTACTTTCAGAAGTAATAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CCA 72 bp | CATATACATGACTTGCAAATCTCTTCTCCCCATCTGTaGGGTTGCCTTTTCACTGATGGTATCCTTTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: HIHDLQISSPHL*GCLFTDGILCN Trigger: GTTACAAAGGATACCATCAGTGAAAAGGCAACCCCACAGATGGGGAGAAGAGATTTGCAAGTCATGTATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CAA 72 bp | AGAAAATGTCCACAGCAATTCTTCCAGGCCAGAATCTaGCCAACCCACCAGAAAGCAGTAAAGCTGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: RKCPQQFFQARI*PTHQKAVKLYF Trigger: AAAATACAGCTTTACTGCTTTCTGGTGGGTTGGCAAGATTCTGGCCTGGAAGAATTGCTGTGGACATTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665875.1 |
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| CDS TCA 72 bp | ATACTCATCATCTGCCAGGGGATACAGCACTTTTATTaGAGTTATTGGTTGGTCCATGATGGACGCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: ILIICQGIQHFY*SYWLVHDGRSY Trigger: ATATGAGCGTCCATCATGGACCAACCAATAACTTCAATAAAAGTGCTGTATCCCCTGGCAGATGATGAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000433856.5 ENST00000588185.1 ENST00000591334.5 |
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| CDS GCA 72 bp | TGCTTTGGATACAAATCCCTTATCATATACATGACTTaGAAATCTCTTCTCCCCATCTGTGGGGTTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CFGYKSLIIYMT*KSLLPICGVAF Trigger: AAAGGCAACCCCACAGATGGGGAGAAGAGATTTGCAAGTCATGTATATGATAAGGGATTTGTATCCAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CAA 90 bp | TGTCATGTTAAACTCTCTCTCAACAACTTTACCTCTAATTCTTTGTaGAGAAAGAGCAACTCGTTTCTGGTGAACCACTTTGGAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: CHVKLSLNNFTSNSL*RKSNSFLVNHFGVD Trigger: GTCTACTCCAAAGTGGTTCACCAGAAACGAGTTGCTCTTTCTCAACAAAGAATTAGAGGTAAAGTTGTTGAGAGAGAGTTTAACATGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 72 bp | GAATGTTCAAATAAGGATGAGACACTGAAAGATTGGTaGGGCCATTCTACCTTAACCAACACTTCAATTGAG | + |
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Preference number: 6 (lower is better) Translates to: ECSNKDETLKDW*GHSTLTNTSIE Trigger: CTCAATTGAAGTGTTGGTTAAGGTAGAATGGCCTCACCAATCTTTCAGTGTCTCATCCTTATTTGAACATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 72 bp | TCACTGGATAAGATTTGGAAAAAGTGGTGCTGTCATTaGCACACTATAAGACTGCAAATCTACTGTACGATC | + |
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Preference number: 6 (lower is better) Translates to: SLDKIWKKWCCH*HTIRLQIYCTI Trigger: GATCGTACAGTAGATTTGCAGTCTTATAGTGTGTCAATGACAGCACCACTTTTTCCAAATCTTATCCAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS TCA 72 bp | TTATATGCTTTGGATACAAATCCCTTATCATATACATaGCTTGCAAATCTCTTCTCCCCATCTGTGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LYALDTNPLSYT*LANLFSPSVGL Trigger: CAACCCCACAGATGGGGAGAAGAGATTTGCAAGTCATGTATATGATAAGGGATTTGTATCCAAAGCATATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CCA 72 bp | CCAGAATCACAAGAAATGCCTTTATTACTGAATCACTaGATAAGATTTGGAAAAAGTGGTGCTGTCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: PESQEMPLLLNH*IRFGKSGAVID Trigger: GTCAATGACAGCACCACTTTTTCCAAATCTTATCCAGTGATTCAGTAATAAAGGCATTTCTTGTGATTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS CAA 72 bp | AAACTCTCTCTCAACAACTTTACCTCTAATTCTTTGTaGAGAAAGAGCAACTCGTTTCTGGTGAACCACTTT | + |
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Preference number: 6 (lower is better) Translates to: KLSLNNFTSNSL*RKSNSFLVNHF Trigger: AAAGTGGTTCACCAGAAACGAGTTGCTCTTTCTCAACAAAGAATTAGAGGTAAAGTTGTTGAGAGAGAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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| CDS GCA 72 bp | TATGTCATCTTTAGAGAAATGTCTGTTCTAATCCTTTaGCTGAATTCAAATTGGGTTCTGTGCCTTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: YVIFREMSVLIL*LNSNWVLCLFI Trigger: AATGAAAAGGCACAGAACCCAATTTGAATTCAGGCAAAGGATTAGAACAGACATTTCTCTAAAGATGACATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433856.5 |
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