Pregenerated sensors for LINC01482 (Homo sapiens)
Ensembl gene IDs: ENSG00000267659Ensembl transcript IDs: ENST00000585484.1, ENST00000587999.1, ENST00000589610.5, ENST00000591754.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATGAAGTGCTCACCGACTCAGCTAGGCTTTGTCCCAACTTGCACTaGCCTCCCTGCCCCCTAAGGATGCAGTCTGCTTGGCTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HEVLTDSARLCPNLH*PPCPLRMQSAWLSS Trigger: GGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGTCAGTGCAAGTTGGGACAAAGCCTAGCTGAGTCGGTGAGCACTTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 90 bp | GACAGAAGGAGATGGTCCACCTTGAGGAACTGTGAGATGTCAGCCTaGAGCCTGGGTTTGGGAGGTCTTATGGGAGTCGACAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRRRWSTLRNCEMSA*SLGLGGLMGVDRAA Trigger: TGCTGCTCTGTCGACTCCCATAAGACCTCCCAAACCCAGGCTCCAGGCTGACATCTCACAGTTCCTCAAGGTGGACCATCTCCTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587999.1 |
||
| CDS GCA 90 bp | TTGTCCCAACTTGCACTGACCTCCCTGCCCCCTAAGGATGCAGTCTaGTTGGCTCTCTTCCATTTTCCATGGTACAGGTACCCGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLALTSLPPKDAV*LALFHFPWYRYPTV Trigger: GACAGTCGGGTACCTGTACCATGGAAAATGGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGTCAGTGCAAGTTGGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 90 bp | CTGCCCCCTAAGGATGCAGTCTGCTTGGCTCTCTTCCATTTTCCATaGTACAGGTACCCGACTGTCTCTTTCTGCTTAGCTCCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPKDAVCLALFHFP*YRYPTVSFCLAPPA Trigger: GGCAGGTGGAGCTAAGCAGAAAGAGACAGTCGGGTACCTGTACCATGGAAAATGGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 90 bp | ATAGGGTTGGTCAGACAGAAGGAGATGGTCCACCTTGAGGAACTGTaGGATGTCAGCCTGGAGCCTGGGTTTGGGAGGTCTTATGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IGLVRQKEMVHLEEL*DVSLEPGFGRSYGS Trigger: ACTCCCATAAGACCTCCCAAACCCAGGCTCCAGGCTGACATCTCACAGTTCCTCAAGGTGGACCATCTCCTTCTGTCTGACCAACCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587999.1 |
||
| CDS GCA 90 bp | ATTCTTTTGAAAGGTAGTCTGGGATCTCCAGGCTCTGGAAATACCTaGATGGCTGGGGAGCGACTGCACGGGAAGGTACAGGATTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ILLKGSLGSPGSGNT*MAGERLHGKVQDFP Trigger: CGGGAAATCCTGTACCTTCCCGTGCAGTCGCTCCCCAGCCATGCAGGTATTTCCAGAGCCTGGAGATCCCAGACTACCTTTCAAAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585484.1 ENST00000591754.1 |
||
| CDS GCA 90 bp | GGGAGCGACTGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTTaGAGACTCACTATGCCATGCAGGCTCATACTCAGATGTGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSDCTGRYRISRVHS*RLTMPCRLILRCVV Trigger: AACTACACATCTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCAGTCGCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 90 bp | CCACTGACAGATGGACGACTTAGGCAGGAAATTGCTTCCCCTCTCTaGGGCTTCTGTTATTTCGTACGGCTGCTTGCCATGAATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLTDGRLRQEIASPL*GFCYFVRLLAMNLL Trigger: GAGGAGATTCATGGCAAGCAGCCGTACGAAATAACAGAAGCCCCAGAGAGGGGAAGCAATTTCCTGCCTAAGTCGTCCATCTGTCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 90 bp | GGTCCTAGGAAGAAGGGAGTCACAAGTGAAATGATGGGAATTCTATaGCATGGTGAGGCCATGACAGCACTGGTCCGGAACCGAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPRKKGVTSEMMGIL*HGEAMTALVRNRGF Trigger: AAAGCCTCGGTTCCGGACCAGTGCTGTCATGGCCTCACCATGTCATAGAATTCCCATCATTTCACTTGTGACTCCCTTCTTCCTAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 90 bp | TCTTCAAGAAGCTATCTGGCAGTCACCCTCTGGATACACAGCATGTaGAAGATTGCAGTGGAGCAAAGCTTAGAGGCAGGAAAAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSYLAVTLWIHSM*KIAVEQSLEAGKML Trigger: GAGCATTTTTCCTGCCTCTAAGCTTTGCTCCACTGCAATCTTTCACATGCTGTGTATCCAGAGGGTGACTGCCAGATAGCTTCTTGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 90 bp | GCTCTCTTCCATTTTCCATGGTACAGGTACCCGACTGTCTCTTTCTaGTTAGCTCCACCTGCCCATTCTTTGTATAACAATAGCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALFHFPWYRYPTVSF*LAPPAHSLYNNSIT Trigger: TGTGATGCTATTGTTATACAAAGAATGGGCAGGTGGAGCTAAGCAGAAAGAGACAGTCGGGTACCTGTACCATGGAAAATGGAAGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 90 bp | AGCAGGACCCTTAACACCGTGGGATGTGTGCATGTTTCTAAACCTTaGACTCCAGGGCTGGTAAAGTTTACCTCCAATCGATTTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRTLNTVGCVHVSKP*TPGLVKFTSNRFIL Trigger: CAAAATAAATCGATTGGAGGTAAACTTTACCAGCCCTGGAGTGCAAGGTTTAGAAACATGCACACATCCCACGGTGTTAAGGGTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 90 bp | CCATGCAGGCTCATACTCAGATGTGTAGTTCTATCACTTCTTATGTaGGAGATTTCCACTGGGTTATTCTTAGACAAAATGTTCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCRLILRCVVLSLLM*EISTGLFLDKMFLG Trigger: TCCGAGGAACATTTTGTCTAAGAATAACCCAGTGGAAATCTCTCACATAAGAAGTGATAGAACTACACATCTGAGTATGAGCCTGCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | AGGCAGGAGAATGGCGTGAACCCGGGAGGCAGTGCTTaGAGTGAGCGGAGATCACGCCACTGCACTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQENGVNPGGSA*SERRSRHCTTA Trigger: GGCTGTAGTGCAGTGGCGTGATCTCCGCTCACTGCAAGCACTGCCTCCCGGGTTCACGCCATTCTCCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 72 bp | TCTCAGAAATGCCAGCTTCCCGTATCTCCCTCCACATaGAGGCAGGACACGCTCTGGCCTTGCCCACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQKCQLPVSPST*RQDTLWPCPPS Trigger: GGAGGGTGGGCAAGGCCAGAGCGTGTCCTGCCTCCATGTGGAGGGAGATACGGGAAGCTGGCATTTCTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591754.1 |
||
| CDS TCA 72 bp | CTCACCGACTCAGCTAGGCTTTGTCCCAACTTGCACTaGCCTCCCTGCCCCCTAAGGATGCAGTCTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTDSARLCPNLH*PPCPLRMQSAW Trigger: CCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGTCAGTGCAAGTTGGGACAAAGCCTAGCTGAGTCGGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | CAGGCTCTGGAAATACCTGCATGGCTGGGGAGCGACTaGACGGGAAGGTACAGGATTTCCCGAGTTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: QALEIPAWLGSD*TGRYRISRVHS Trigger: ACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCAGTCGCTCCCCAGCCATGCAGGTATTTCCAGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585484.1 ENST00000591754.1 |
||
| CDS GCA 72 bp | CCCTCTCTGGGGCTTCTGTTATTTCGTACGGCTGCTTaGCATGAATCTCCTCCAGGGGACTCTCTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLGLLLFRTAA*HESPPGDSLGL Trigger: CAGACCCAGAGAGTCCCCTGGAGGAGATTCATGGCAAGCAGCCGTACGAAATAACAGAAGCCCCAGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585484.1 ENST00000591754.1 |
||
| CDS TCA 72 bp | GTCAGACAGAAGGAGATGGTCCACCTTGAGGAACTGTaGGATGTCAGCCTGGAGCCTGGGTTTGGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRQKEMVHLEEL*DVSLEPGFGRS Trigger: AGACCTCCCAAACCCAGGCTCCAGGCTGACATCTCACAGTTCCTCAAGGTGGACCATCTCCTTCTGTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587999.1 |
||
| CDS CAA 90 bp | TCCCAACTTGCACTGACCTCCCTGCCCCCTAAGGATGCAGTCTGCTaGGCTCTCTTCCATTTTCCATGGTACAGGTACCCGACTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQLALTSLPPKDAVC*ALFHFPWYRYPTVS Trigger: AGAGACAGTCGGGTACCTGTACCATGGAAAATGGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGTCAGTGCAAGTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | CTTGCACTGACCTCCCTGCCCCCTAAGGATGCAGTCTaGTTGGCTCTCTTCCATTTTCCATGGTACAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LALTSLPPKDAV*LALFHFPWYRY Trigger: GTACCTGTACCATGGAAAATGGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGTCAGTGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 90 bp | GGGGAGCGACTGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTaGCAGACTCACTATGCCATGCAGGCTCATACTCAGATGTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GERLHGKVQDFPSSQ*QTHYAMQAHTQMCS Trigger: ACTACACATCTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCAGTCGCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 72 bp | GATGGACGACTTAGGCAGGAAATTGCTTCCCCTCTCTaGGGCTTCTGTTATTTCGTACGGCTGCTTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: DGRLRQEIASPL*GFCYFVRLLAM Trigger: CATGGCAAGCAGCCGTACGAAATAACAGAAGCCCCAGAGAGGGGAAGCAATTTCCTGCCTAAGTCGTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | CTGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTaGCAGACTCACTATGCCATGCAGGCTCATACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHGKVQDFPSSQ*QTHYAMQAHTQ Trigger: CTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | TGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTTaGAGACTCACTATGCCATGCAGGCTCATACTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CTGRYRISRVHS*RLTMPCRLILR Trigger: TCTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 72 bp | AGCTATCTGGCAGTCACCCTCTGGATACACAGCATGTaGAAGATTGCAGTGGAGCAAAGCTTAGAGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SYLAVTLWIHSM*KIAVEQSLEAG Trigger: TCCTGCCTCTAAGCTTTGCTCCACTGCAATCTTTCACATGCTGTGTATCCAGAGGGTGACTGCCAGATAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | TGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTTaGAGACTCACTATGCCATGCAGGCTCATTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CTGRYRISRVHS*RLTMPCRLIFF Trigger: GAAGAAAATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591754.1 |
||
| CDS CAA 72 bp | CTGCACGGGAAGGTACAGGATTTCCCGAGTTCACAGTaGCAGACTCACTATGCCATGCAGGCTCATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHGKVQDFPSSQ*QTHYAMQAHFL Trigger: AAGAAAATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAATCCTGTACCTTCCCGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591754.1 |
||
| CDS CAA 90 bp | AGCCAGGATGTATTCTGTGACCCAGCATCAGTTAGGATTTTCCTGTaGTGTAGCAGGAGATCCAGCTGTAGTCCTAGTCACTTGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQDVFCDPASVRIFL*CSRRSSCSPSHLRD Trigger: GTCCCTCAAGTGACTAGGACTACAGCTGGATCTCCTGCTACACAACAGGAAAATCCTAACTGATGCTGGGTCACAGAATACATCCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587999.1 |
||
| CDS TCA 72 bp | AAGAAGGGAGTCACAAGTGAAATGATGGGAATTCTATaGCATGGTGAGGCCATGACAGCACTGGTCCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KKGVTSEMMGIL*HGEAMTALVRN Trigger: GTTCCGGACCAGTGCTGTCATGGCCTCACCATGTCATAGAATTCCCATCATTTCACTTGTGACTCCCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | GGCAGTCACCCTCTGGATACACAGCATGTGAAAGATTaGAGTGGAGCAAAGCTTAGAGGCAGGAAAAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSHPLDTQHVKD*SGAKLRGRKNA Trigger: AGCATTTTTCCTGCCTCTAAGCTTTGCTCCACTGCAATCTTTCACATGCTGTGTATCCAGAGGGTGACTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | GGAGTCTGTCACTCAGATCAACTCTTCAAGAATTTATaGCCGGGTCCTAGGAAGAAGGGAGTCACAAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVCHSDQLFKNL*PGPRKKGVTSE Trigger: TTCACTTGTGACTCCCTTCTTCCTAGGACCCGGGCATAAATTCTTGAAGAGTTGATCTGAGTGACAGACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | CTTAACACCGTGGGATGTGTGCATGTTTCTAAACCTTaGACTCCAGGGCTGGTAAAGTTTACCTCCAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: LNTVGCVHVSKP*TPGLVKFTSNR Trigger: TCGATTGGAGGTAAACTTTACCAGCCCTGGAGTGCAAGGTTTAGAAACATGCACACATCCCACGGTGTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CCA 72 bp | ATGACATGGAAGAAAACAGCAGGACCCTTAACACCGTaGGATGTGTGCATGTTTCTAAACCTTGCACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MTWKKTAGPLTP*DVCMFLNLALQ Trigger: CTGGAGTGCAAGGTTTAGAAACATGCACACATCCCACGGTGTTAAGGGTCCTGCTGTTTTCTTCCATGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | GTATTCTGTGACCCAGCATCAGTTAGGATTTTCCTGTaGTGTAGCAGGAGATCCAGCTGTAGTCCTAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFCDPASVRIFL*CSRRSSCSPSH Trigger: GTGACTAGGACTACAGCTGGATCTCCTGCTACACAACAGGAAAATCCTAACTGATGCTGGGTCACAGAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587999.1 |
||
| CDS CAA 72 bp | ACTGGTCCGGAACCGAGGCTTTTCCAGGAAGGATCCTaGAAGCACTTGAGTAGAAAGAGCACACATATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: TGPEPRLFQEGS*KHLSRKSTHIQ Trigger: TTGAATATGTGTGCTCTTTCTACTCAAGTGCTTCAAGGATCCTTCCTGGAAAAGCCTCGGTTCCGGACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | CAAACTCCCACACACCTATGCTGTGCATTTCCTCTGTaGGGTGTTAGAAAGCGCAGCAAGAAAATGACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QTPTHLCCAFPL*GVRKRSKKMTV Trigger: AACGGTCATTTTCTTGCTGCGCTTTCTAACACCCAACAGAGGAAATGCACAGCATAGGTGTGTGGGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 72 bp | TTCCTCTGTTGGGTGTTAGAAAGCGCAGCAAGAAAATaGCCGTTTCCTCCTCCCTTTCTTCAAGAAGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: FLCWVLESAARK*PFPPPFLQEAI Trigger: GATAGCTTCTTGAAGAAAGGGAGGAGGAAACGGTCATTTTCTTGCTGCGCTTTCTAACACCCAACAGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 90 bp | CCTTGCACTCCAGGGCTGGTAAAGTTTACCTCCAATCGATTTATTTaGCTCAGCGAGTTTTCTTTATCCAACAGAGGCTCTTCTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PCTPGLVKFTSNRFI*LSEFSLSNRGSSQE Trigger: CTCTTGAGAAGAGCCTCTGTTGGATAAAGAAAACTCGCTGAGCAAAATAAATCGATTGGAGGTAAACTTTACCAGCCCTGGAGTGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | ATTTCCCGAGTTCACAGTTGCAGACTCACTATGCCATaGAGGCTCATACTCAGATGTGTAGTTCTATCACTT | + |
|
Preference number: 6 (lower is better) Translates to: ISRVHSCRLTMP*RLILRCVVLSL Trigger: AAGTGATAGAACTACACATCTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACTCGGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS GCA 72 bp | CATTTTCCATGGTACAGGTACCCGACTGTCTCTTTCTaGTTAGCTCCACCTGCCCATTCTTTGTATAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: HFPWYRYPTVSF*LAPPAHSLYNN Trigger: ATTGTTATACAAAGAATGGGCAGGTGGAGCTAAGCAGAAAGAGACAGTCGGGTACCTGTACCATGGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | TTAGAGAGTTTCAAAAGCCCTTTAGGTGTTTGCTGGTaGAGCCGTCTTCCCTCGCAAACAACTATTTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LESFKSPLGVCW*SRLPSQTTISE Trigger: TTCGGAAATAGTTGTTTGCGAGGGAAGACGGCTCAACCAGCAAACACCTAAAGGGCTTTTGAAACTCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589610.5 |
||
| CDS TCA 72 bp | AGGTGTCAGGTATGTGAAGGTATCACTGGGGTCCAGTaGGCACATGAGATTGATCAAATAAAAGGTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RCQVCEGITGVQ*AHEIDQIKGLN Trigger: ATTGAGACCTTTTATTTGATCAATCTCATGTGCTCACTGGACCCCAGTGATACCTTCACATACCTGACACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | TTTCATAAGAGTTTGCAGTATAGCAAGGATCTTGACTaGAACGGAAGCTGTGTTTCCCTGAGGTGTCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FHKSLQYSKDLD*NGSCVSLRCQV Trigger: TACCTGACACCTCAGGGAAACACAGCTTCCGTTCAAGTCAAGATCCTTGCTATACTGCAAACTCTTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS CAA 72 bp | CCAGGGCTGGTAAAGTTTACCTCCAATCGATTTATTTaGCTCAGCGAGTTTTCTTTATCCAACAGAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLVKFTSNRFI*LSEFSLSNRGS Trigger: AGAGCCTCTGTTGGATAAAGAAAACTCGCTGAGCAAAATAAATCGATTGGAGGTAAACTTTACCAGCCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||
| CDS TCA 72 bp | CTCATACTCAGATGTGTAGTTCTATCACTTCTTATGTaGGAGATTTCCACTGGGTTATTCTTAGACAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: LILRCVVLSLLM*EISTGLFLDKM Trigger: CATTTTGTCTAAGAATAACCCAGTGGAAATCTCTCACATAAGAAGTGATAGAACTACACATCTGAGTATGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585484.1 |
||