Pregenerated sensors for LINC01479 (Homo sapiens)

Ensembl gene IDs: ENSG00000255772

Ensembl transcript IDs: ENST00000545520.5, ENST00000546170.1

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CAGATACCCCACCAGTCAGGGTCTGTGCTGTTCCTTGGGCCTCTTTaGTTTTCCAGCTCAGACCTGGCTTTATATGGTCTGTTTCAAGCT	+
Preference number: 5 (lower is better) Translates to: QIPHQSGSVLFLGPL*FSSSDLALYGLFQA Trigger: AGCTTGAAACAGACCATATAAAGCCAGGTCTGAGCTGGAAAAGCAAAGAGGCCCAAGGAACAGCACAGACCCTGACTGGTGGGGTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000545520.5
CDS CCA 90 bp	GGTCTGTGCTGTTCCTTGGGCCTCTTTGCTTTTCCAGCTCAGACCTaGCTTTATATGGTCTGTTTCAAGCTCTTCCAGCCTCCATCTTAT	+
Preference number: 5 (lower is better) Translates to: GLCCSLGLFAFPAQT*LYMVCFKLFQPPSY Trigger: ATAAGATGGAGGCTGGAAGAGCTTGAAACAGACCATATAAAGCCAGGTCTGAGCTGGAAAAGCAAAGAGGCCCAAGGAACAGCACAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545520.5
CDS GCA 90 bp	TCCCGGAGGTCCTCTGCTTTCTCTCTTTGTCTTCTGCTTGCCTCTTaGCTTAGTGTAAAGAATCCAGATGGGCTATGCTTGCAAGATAAA	+
Preference number: 5 (lower is better) Translates to: SRRSSAFSLCLLLAS*LSVKNPDGLCLQDK Trigger: TTTATCTTGCAAGCATAGCCCATCTGGATTCTTTACACTAAGGCAAGAGGCAAGCAGAAGACAAAGAGAGAAAGCAGAGGACCTCCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546170.1
CDS CAA 90 bp	ATAAATTGTCTCACCGGAATCAGATCACTTCGTTTCACAGCAGTATaGGAATACTTAATCGAATTTCTCAGTGGAGCCACAGGCATGACT	+
Preference number: 6 (lower is better) Translates to: INCLTGIRSLRFTAV*EYLIEFLSGATGMT Trigger: AGTCATGCCTGTGGCTCCACTGAGAAATTCGATTAAGTATTCCAATACTGCTGTGAAACGAAGTGATCTGATTCCGGTGAGACAATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000545520.5 ENST00000546170.1
CDS GCA 72 bp	TTGATTCCACTTGAAGATCTTCATGAAGAAAGTCCTTaGTGGAACCTGAGCAGACTGAATACTAATTTCTCT	+
Preference number: 6 (lower is better) Translates to: LIPLEDLHEESP*WNLSRLNTNFS Trigger: AGAGAAATTAGTATTCAGTCTGCTCAGGTTCCAGCAAGGACTTTCTTCATGAAGATCTTCAAGTGGAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000545520.5 ENST00000546170.1

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