Pregenerated sensors for LINC01473 (Homo sapiens)
Ensembl gene IDs: ENSG00000237877Ensembl transcript IDs: ENST00000419719.2, ENST00000427108.6, ENST00000456653.6, ENST00000655126.1, ENST00000656786.1, ENST00000658984.1, ENST00000658990.1, ENST00000659351.1, ENST00000659769.1, ENST00000661574.1, ENST00000665629.1, ENST00000666677.1, ENST00000667056.1, ENST00000667839.1, ENST00000667983.1, ENST00000668977.1, ENST00000668985.1, ENST00000669598.1, ENST00000670612.1, ENST00000671116.1, ENST00000671599.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTGCAATCATaGTGGAAAGGGAAGCAAACATGTCCTTCACATGAAGTCCTAGCC | + |
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Preference number: 5 (lower is better) Translates to: CEFSMAREASGNLQS*WKGKQTCPSHEVLA Trigger: GGCTAGGACTTCATGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS CCA 90 bp | GAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTGCAATCATGGTaGAAAGGGAAGCAAACATGTCCTTCACATGAAGTCCTAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: EFSMAREASGNLQSW*KGKQTCPSHEVLAK Trigger: TTTGGCTAGGACTTCATGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS GCA 90 bp | CTTCTTTTCCTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACCTGATA | + |
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Preference number: 5 (lower is better) Translates to: LLFLSSAWLGRPQET*NHGGKGSKHVLHLI Trigger: TATCAGGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCAGGAAAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661574.1 |
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| CDS CCA 90 bp | GAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTGCAATCATGGTaGAAAGGGAAGCAAACATGTCCTTCACTGTTAGAAGTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: EFSMAREASGNLQSW*KGKQTCPSLLEVFC Trigger: ACAGAAGACTTCTAACAGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655126.1 ENST00000665629.1 |
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| CDS CCA 90 bp | TGTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTGCAATCATaGTGGAAAGGGAAGCAAACATGTCCTTCACTGTTAGAAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CEFSMAREASGNLQS*WKGKQTCPSLLEVF Trigger: GAAGACTTCTAACAGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655126.1 ENST00000665629.1 |
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| CDS GCA 90 bp | TTTCTTCTTTTCAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACCTGATA | + |
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Preference number: 5 (lower is better) Translates to: FLLFSSAWLGRPQET*NHGGKGSKHVLHLI Trigger: TATCAGGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTGAAAAGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419719.2 ENST00000658984.1 |
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| CDS GCA 90 bp | ACATATCATCTTAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACCTGATA | + |
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Preference number: 5 (lower is better) Translates to: TYHLSSAWLGRPQET*NHGGKGSKHVLHLI Trigger: TATCAGGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTAAGATGATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658990.1 |
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| CDS GCA 90 bp | TTAAAAACTGTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACATGAAG | + |
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Preference number: 5 (lower is better) Translates to: LKTVSSAWLGRPQET*NHGGKGSKHVLHMK Trigger: CTTCATGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACAGTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS GCA 90 bp | CTTTTGCTATTCAGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTaGTTGGATGAATATCCCTGTGTAGCTGCTGATTTGGAAGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LLLFSLQFGTLVLSF*LDEYPCVAADLEAQ Trigger: TTGAGCTTCCAAATCAGCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCTGAATAGCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671116.1 |
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| CDS CCA 90 bp | GTTGCATCACTCAGAGATCAACACTCGCTTGAACTGCTGTCATTATaGAGCTTGAATAGGAGAAATTCACTGGAGCCATCATTAATGCTT | + |
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Preference number: 5 (lower is better) Translates to: VASLRDQHSLELLSL*SLNRRNSLEPSLML Trigger: AAGCATTAATGATGGCTCCAGTGAATTTCTCCTATTCAAGCTCCATAATGACAGCAGTTCAAGCGAGTGTTGATCTCTGAGTGATGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CCA 90 bp | GATATACTTTTGTCGCTTCCAGCAAAGTCTCAAAGTTGTCAATCATaGCCTCGTACATCAGTAAGACAGCTCTCCAGAGACATTACACAA | + |
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Preference number: 5 (lower is better) Translates to: DILLSLPAKSQSCQS*PRTSVRQLSRDITQ Trigger: TTGTGTAATGTCTCTGGAGAGCTGTCTTACTGATGTACGAGGCCATGATTGACAACTTTGAGACTTTGCTGGAAGCGACAAAAGTATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000456653.6 ENST00000655126.1 ENST00000656786.1 ENST00000658984.1 ENST00000658990.1 ENST00000667839.1 ENST00000668977.1 ENST00000668985.1 ENST00000669598.1 ENST00000670612.1 |
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| CDS GCA 90 bp | CTTTTGCTATTCAGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTaGTTGGATGAATATCCCTGTGTAGCTGATTTGGAAGCTCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: LLLFSLQFGTLVLSF*LDEYPCVADLEAQN Trigger: ATTTTGAGCTTCCAAATCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCTGAATAGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS TCA 90 bp | TTTATATATGCTACTTTATCTCCTAAGCCCATGTTGAATCTGAACTaGCTCTCCATCTGGCTTCTACCTTTGCCATTATATCAAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: FIYATLSPKPMLNLN*LSIWLLPLPLYQNC Trigger: GCAGTTTTGATATAATGGCAAAGGTAGAAGCCAGATGGAGAGTCAGTTCAGATTCAACATGGGCTTAGGAGATAAAGTAGCATATATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667983.1 |
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| CDS CCA 90 bp | CCAATACTCTCTTTATTCACTCTTGTTATAATGGATGTCAGAGTTTaGTTTCCCTTCTTCTATAATCCTAGCACTCTTATTGTATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: PILSLFTLVIMDVRV*FPFFYNPSTLIVFG Trigger: CCCAAATACAATAAGAGTGCTAGGATTATAGAAGAAGGGAAACCAAACTCTGACATCCATTATAACAAGAGTGAATAAAGAGAGTATTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659351.1 ENST00000667983.1 |
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| CDS GCA 72 bp | GTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VSSAWLGRPQET*NHGGKGSKHVL Trigger: AAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655126.1 ENST00000665629.1 ENST00000667056.1 ENST00000667839.1 |
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| CDS GCA 72 bp | CTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSSAWLGRPQET*NHGGKGSKHVL Trigger: AAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661574.1 |
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| CDS GCA 72 bp | TTCAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSSAWLGRPQET*NHGGKGSKHVL Trigger: AAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419719.2 ENST00000658984.1 ENST00000670612.1 |
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| CDS GCA 72 bp | CTTAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSSAWLGRPQET*NHGGKGSKHVL Trigger: AAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658990.1 |
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| CDS GCA 72 bp | TACAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTTaGAATCATGGTGGAAAGGGAAGCAAACATGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: YSSAWLGRPQET*NHGGKGSKHVL Trigger: AAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666677.1 |
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| CDS CAA 90 bp | TCTTCTTTTCCTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSFPEFSMAREASGN*QSWWKGKQTCPSPD Trigger: ATCAGGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCAGGAAAAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661574.1 |
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| CDS CAA 90 bp | CTTTCTTCTTTTCAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSSFQFSMAREASGN*QSWWKGKQTCPSPD Trigger: ATCAGGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTGAAAAGAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419719.2 ENST00000658984.1 |
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| CDS CCA 72 bp | TTGTCGCTTCCAGCAAAGTCTCAAAGTTGTCAATCATaGCCTCGTACATCAGTAAGACAGCTCTCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSLPAKSQSCQS*PRTSVRQLSRD Trigger: GTCTCTGGAGAGCTGTCTTACTGATGTACGAGGCCATGATTGACAACTTTGAGACTTTGCTGGAAGCGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000456653.6 ENST00000655126.1 ENST00000656786.1 ENST00000658984.1 ENST00000658990.1 ENST00000667839.1 ENST00000668977.1 ENST00000668985.1 ENST00000669598.1 ENST00000670612.1 |
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| CDS CAA 90 bp | TTTAAAAACTGTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FKNCEFSMAREASGN*QSWWKGKQTCPSLL Trigger: TAACAGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACAGTTTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655126.1 ENST00000665629.1 |
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| CDS CAA 90 bp | TTTAAAAACTGTGAGTTCAGCATGGCTAGGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAAGGGAAGCAAACATGTCCTTCACATGAA | + |
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Preference number: 6 (lower is better) Translates to: FKNCEFSMAREASGN*QSWWKGKQTCPSHE Trigger: TTCATGTGAAGGACATGTTTGCTTCCCTTTCCACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACAGTTTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS CCA 72 bp | CTCAGAGATCAACACTCGCTTGAACTGCTGTCATTATaGAGCTTGAATAGGAGAAATTCACTGGAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LRDQHSLELLSL*SLNRRNSLEPS Trigger: TGATGGCTCCAGTGAATTTCTCCTATTCAAGCTCCATAATGACAGCAGTTCAAGCGAGTGTTGATCTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CAA 72 bp | ACTCCAAGTGTTCCTTTGTTAGGCGATGTTTTTGTGTaGCATCACTCAGAGATCAACACTCGCTTGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: TPSVPLLGDVFV*HHSEINTRLNC Trigger: GCAGTTCAAGCGAGTGTTGATCTCTGAGTGATGCAACACAAAAACATCGCCTAACAAAGGAACACTTGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CAA 72 bp | AGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTGCTaGGATGAATATCCCTGTGTAGCTGCTGATTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLQFGTLVLSFC*DEYPCVAADLE Trigger: TTCCAAATCAGCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671116.1 |
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| CDS CAA 72 bp | AGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTGCTaGGATGAATATCCCTGTGTAGCTGATTTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLQFGTLVLSFC*DEYPCVADLEA Trigger: AGCTTCCAAATCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS CCA 72 bp | TCTTCCTTTTGCTATTCAGCCTCCAGTTCGGAACTCTaGTATTATCTTTCTGCTTGGATGAATATCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSFCYSASSSEL*YYLSAWMNIPV Trigger: CACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCTGAATAGCAAAAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667056.1 ENST00000671116.1 |
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| CDS CAA 90 bp | TTGCTATTCAGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTGCTaGGATGAATATCCCTGTGTAGCTGCTGATTTGGAAGCTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LLFSLQFGTLVLSFC*DEYPCVAADLEAQN Trigger: ATTTTGAGCTTCCAAATCAGCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCTGAATAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671116.1 |
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| CDS CAA 90 bp | TTGCTATTCAGCCTCCAGTTCGGAACTCTGGTATTATCTTTCTGCTaGGATGAATATCCCTGTGTAGCTGATTTGGAAGCTCAAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: LLFSLQFGTLVLSFC*DEYPCVADLEAQNL Trigger: CAGATTTTGAGCTTCCAAATCAGCTACACAGGGATATTCATCCAAGCAGAAAGATAATACCAGAGTTCCGAACTGGAGGCTGAATAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667056.1 |
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| CDS CCA 72 bp | TATACACTAGATACTTTAAAAACTGTGAGTTCAGCATaGCTAGGGAGGCCTCAGGAAACTTGCAATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: YTLDTLKTVSSA*LGRPQETCNHG Trigger: ACCATGATTGCAAGTTTCCTGAGGCCTCCCTAGCCATGCTGAACTCACAGTTTTTAAAGTATCTAGTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655126.1 ENST00000665629.1 ENST00000667056.1 ENST00000667839.1 |
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| CDS CAA 72 bp | GATCAACACTCGCTTGAACTGCTGTCATTATGGAGCTaGAATAGGAGAAATTCACTGGAGCCATCATTAATG | + |
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Preference number: 6 (lower is better) Translates to: DQHSLELLSLWS*NRRNSLEPSLM Trigger: CATTAATGATGGCTCCAGTGAATTTCTCCTATTCAAGCTCCATAATGACAGCAGTTCAAGCGAGTGTTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CAA 90 bp | ATGAGTAGTACTCCAAGTGTTCCTTTGTTAGGCGATGTTTTTGTGTaGCATCACTCAGAGATCAACACTCGCTTGAACTGCTGTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: MSSTPSVPLLGDVFV*HHSEINTRLNCCHY Trigger: ATAATGACAGCAGTTCAAGCGAGTGTTGATCTCTGAGTGATGCAACACAAAAACATCGCCTAACAAAGGAACACTTGGAGTACTACTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CAA 90 bp | AACATGTCCTTCACTGTTAGAAGTCTTCTGTCTATAGGCCAGAACTaGGGCAGTCTTCTCTCTCAGTTTATACTGATAGATCATAACACC | + |
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Preference number: 6 (lower is better) Translates to: NMSFTVRSLLSIGQN*GSLLSQFILIDHNT Trigger: GGTGTTATGATCTATCAGTATAAACTGAGAGAGAAGACTGCCCAAGTTCTGGCCTATAGACAGAAGACTTCTAACAGTGAAGGACATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655126.1 ENST00000665629.1 |
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| CDS CAA 90 bp | GCTAGTATGGAACCCCAAATAACATCCAATTGTCGCAAGAGAAATTaGCTAAGCAGGCGGAAATATGATTCAAGAGCCTCTTTTAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASMEPQITSNCRKRN*LSRRKYDSRASFSL Trigger: TAAGCTAAAAGAGGCTCTTGAATCATATTTCCGCCTGCTTAGCAAATTTCTCTTGCGACAATTGGATGTTATTTGGGGTTCCATACTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000419719.2 ENST00000427108.6 ENST00000456653.6 ENST00000655126.1 ENST00000656786.1 ENST00000658984.1 ENST00000658990.1 ENST00000659769.1 ENST00000661574.1 ENST00000665629.1 ENST00000666677.1 ENST00000667056.1 ENST00000667839.1 ENST00000667983.1 ENST00000668977.1 ENST00000668985.1 ENST00000669598.1 ENST00000670612.1 ENST00000671116.1 ENST00000671599.1 |
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| CDS CAA 72 bp | TTCACTGTTAGAAGTCTTCTGTCTATAGGCCAGAACTaGGGCAGTCTTCTCTCTCAGTTTATACTGATAGAT | + |
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Preference number: 6 (lower is better) Translates to: FTVRSLLSIGQN*GSLLSQFILID Trigger: ATCTATCAGTATAAACTGAGAGAGAAGACTGCCCAAGTTCTGGCCTATAGACAGAAGACTTCTAACAGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655126.1 ENST00000665629.1 |
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| CDS CAA 90 bp | TCACTCAGAGATCAACACTCGCTTGAACTGCTGTCATTATGGAGCTaGAATAGGAGAAATTCACTGGAGCCATCATTAATGCTTTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SLRDQHSLELLSLWS*NRRNSLEPSLMLFN Trigger: ATTAAAAAGCATTAATGATGGCTCCAGTGAATTTCTCCTATTCAAGCTCCATAATGACAGCAGTTCAAGCGAGTGTTGATCTCTGAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000427108.6 ENST00000659351.1 ENST00000659769.1 ENST00000667056.1 ENST00000667839.1 ENST00000668977.1 ENST00000671116.1 |
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| CDS CCA 72 bp | ACTAGATACTTTAAAAACTGTGCTCAGAAGTCCAGCTaGCTTCACCTCTCAACAAGATCCTTTGTTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TRYFKNCAQKSS*LHLSTRSFVLF Trigger: AAAAAGAACAAAGGATCTTGTTGAGAGGTGAAGCCAGCTGGACTTCTGAGCACAGTTTTTAAAGTATCTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658990.1 |
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| CDS CAA 72 bp | GTCACATCCATTGACTATATCTTCCCTTTCTACACATaGTTGTACGTGAGTATTCAAACATTCTCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VTSIDYIFPFYT*LYVSIQTFSGI Trigger: GATGCCAGAGAATGTTTGAATACTCACGTACAACAATGTGTAGAAAGGGAAGATATAGTCAATGGATGTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659351.1 ENST00000667983.1 |
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| CDS TCA 72 bp | CTTCTTTTCCTGCTCAGATTCAGTTTCATGCTTGACTaGGAATGGCTTGTCCTTATATACACTAGATACTTT | + |
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Preference number: 6 (lower is better) Translates to: LLFLLRFSFMLD*EWLVLIYTRYF Trigger: AAAGTATCTAGTGTATATAAGGACAAGCCATTCTCAGTCAAGCATGAAACTGAATCTGAGCAGGAAAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658990.1 ENST00000665629.1 ENST00000667056.1 ENST00000668977.1 |
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| CDS CAA 90 bp | AGAAGAAAGACCTATGCAATTCAGCATAATATTATAGATATACTTTaGTCGCTTCCAGCAAAGTCTCAAAGTTGTCAATCATGGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RRKTYAIQHNIIDIL*SLPAKSQSCQSWPR Trigger: ACGAGGCCATGATTGACAACTTTGAGACTTTGCTGGAAGCGACAAAAGTATATCTATAATATTATGCTGAATTGCATAGGTCTTTCTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000456653.6 ENST00000655126.1 ENST00000656786.1 ENST00000658984.1 ENST00000658990.1 ENST00000667839.1 ENST00000668977.1 ENST00000668985.1 ENST00000669598.1 ENST00000670612.1 |
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| CDS TCA 72 bp | TTGACTATATCTTCCCTTTCTACACATTGTTGTACGTaGGTATTCAAACATTCTCTGGCATCTCCCATATTA | + |
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Preference number: 6 (lower is better) Translates to: LTISSLSTHCCT*VFKHSLASPIL Trigger: TAATATGGGAGATGCCAGAGAATGTTTGAATACTCACGTACAACAATGTGTAGAAAGGGAAGATATAGTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659351.1 ENST00000667983.1 |
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| CDS CAA 72 bp | GACACCAAAAATATGTTCTGCCCACCCCAACCTTTCTaGAATAATTGGATAATTCCTATTCAAGTCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: DTKNMFCPPQPF*NNWIIPIQVSY Trigger: ATATGAGACTTGAATAGGAATTATCCAATTATTCAAGAAAGGTTGGGGTGGGCAGAACATATTTTTGGTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667983.1 |
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