Pregenerated sensors for LINC01470 (Homo sapiens)
Ensembl gene IDs: ENSG00000249484Ensembl transcript IDs: ENST00000503048.1, ENST00000506723.6, ENST00000511419.5, ENST00000522300.5, ENST00000584829.1, ENST00000653515.1, ENST00000659362.1, ENST00000663464.1, ENST00000665191.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCCAGGCTGTCTCAGTCTCACCAGTCGTGTCACTCCCACCAACTaGTGCAGAGACACACTCAGGAAAATCTTATTGGGAGCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APGCLSLTSRVTPTN*CRDTLRKILLGAAQ Trigger: CTGAGCAGCTCCCAATAAGATTTTCCTGAGTGTGTCTCTGCAGCAGTTGGTGGGAGTGACACGACTGGTGAGACTGAGACAGCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506723.6 |
||
| CDS GCA 90 bp | CCAGGCTGTCTCAGTCTCACCAGTCGTGTCACTCCCACCAACTGCTaGAGAGACACACTCAGGAAAATCTTATTGGGAGCTGCTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGCLSLTSRVTPTNC*RDTLRKILLGAAQS Trigger: GGACTGAGCAGCTCCCAATAAGATTTTCCTGAGTGTGTCTCTGCAGCAGTTGGTGGGAGTGACACGACTGGTGAGACTGAGACAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506723.6 |
||
| CDS CCA 90 bp | GCAGTACTCTTCACACCACACTTTGGAAAAGAAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGGCACTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVLFTPHFGKEVPHG*GGLRIMAGGERHCP Trigger: GGGACAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTTCTTTTCCAAAGTGTGGTGTGAAGAGTACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS CCA 90 bp | TTCTCAGGAGTTCAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACTTCTTACATTGCAGCAGCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSGVQFHMAGEASES*QEVKGTSYIAAARE Trigger: TTCTCTTGCTGCTGCAATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGAACTCCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522300.5 |
||
| CDS GCA 90 bp | TGGCAGGAGGTGAAAGGCACTGTCCCTAGAGGTAAGAAGTACCCTTaGACCATCACTGAGTTTGGATTAGTTCTCTCACGTGAAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WQEVKGTVPRGKKYP*TITEFGLVLSRESP Trigger: GGGACTTTCACGTGAGAGAACTAATCCAAACTCAGTGATGGTGCAAGGGTACTTCTTACCTCTAGGGACAGTGCCTTTCACCTCCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS GCA 90 bp | GATGAAGACATACCCGAGACTGTCCCTAGAGGTAAGAAGTACCCTTaGACCATCACTGAGTTTGGATTAGTTCTCTCACGTGAAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DEDIPETVPRGKKYP*TITEFGLVLSRESP Trigger: GGGACTTTCACGTGAGAGAACTAATCCAAACTCAGTGATGGTGCAAGGGTACTTCTTACCTCTAGGGACAGTCTCGGGTATGTCTTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584829.1 ENST00000653515.1 |
||
| CDS CCA 90 bp | TTAAACAGTCATTTCTCAGTTCTCAGGAGTTCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGGCACTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LNSHFSVLRSSVPHG*GGLRIMAGGERHFL Trigger: TAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGAACTCCTGAGAACTGAGAAATGACTGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522300.5 |
||
| CDS CCA 90 bp | CACCTCATTGCATTTGGCAACACTCCTGACGTGAGTGACATTAGCTaGAGCACAAATCAGGTAGCATCTGCTTCATCTCTCTTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLIAFGNTPDVSDIS*STNQVASASSLFQD Trigger: ATCCTGGAAGAGAGATGAAGCAGATGCTACCTGATTTGTGCTCCAGCTAATGTCACTCACGTCAGGAGTGTTGCCAAATGCAATGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CCA 90 bp | AACCTCATTGCATTTGGCAACACTCCTGACGTGAGTGACATTAGCTaGAGCACAAATCAGGTAGCATCTGCTTCATCTCTCTTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLIAFGNTPDVSDIS*STNQVASASSLFQD Trigger: ATCCTGGAAGAGAGATGAAGCAGATGCTACCTGATTTGTGCTCCAGCTAATGTCACTCACGTCAGGAGTGTTGCCAAATGCAATGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659362.1 |
||
| CDS CCA 90 bp | ACTTCGTTGTGGCAACAACAAATGTTGGTGAGGATGTGGAGTAAGTaGAACTCCCAGATCTTACTCAGAGAAGTAGGTAATGGAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLWQQQMLVRMWSK*NSQILLREVGNGAS Trigger: GGATGCTCCATTACCTACTTCTCTGAGTAAGATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 90 bp | CCCCTTGAAATGAGAACTGATCCACCATCTATTGGGCCAAAGGAGTaGGCCTCAGGCATGATGTCTAAAATTCATACACACTCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLEMRTDPPSIGPKE*ASGMMSKIHTHSVH Trigger: ATGAACAGAGTGTGTATGAATTTTAGACATCATGCCTGAGGCCCACTCCTTTGGCCCAATAGATGGTGGATCAGTTCTCATTTCAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS TCA 90 bp | GAACTGATCCACCATCTATTGGGCCAAAGGAGTGGGCCTCAGGCATaGTGTCTAAAATTCATACACACTCTGTTCATACTTTTTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELIHHLLGQRSGPQA*CLKFIHTLFILFGE Trigger: CTCACCAAAAAGTATGAACAGAGTGTGTATGAATTTTAGACATCATGCCTGAGGCCCACTCCTTTGGCCCAATAGATGGTGGATCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS GCA 90 bp | ACCTTCATCTCTCTTCCAGGATGCCTCACTTTCCAGATTCCAAGATaGCTCATTCTCCAGATGCATTCGTGTTTATTCATTTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFISLPGCLTFQIPR*LILQMHSCLFISFS Trigger: GGAGAAAGAAATGAATAAACACGAATGCATCTGGAGAATGAGGCATCTTGGAATCTGGAAAGTGAGGCATCCTGGAAGAGAGATGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503048.1 ENST00000522300.5 |
||
| CDS GCA 90 bp | TGCTTCATCTCTCTTCCAGGATGCCTCACTTTCCAGATTCCAAGATaGCTCATTCTCCAGATGCATTCGTGTTTATTCATTTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFISLPGCLTFQIPR*LILQMHSCLFISFS Trigger: GGAGAAAGAAATGAATAAACACGAATGCATCTGGAGAATGAGGCATCTTGGAATCTGGAAAGTGAGGCATCCTGGAAGAGAGATGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CCA 90 bp | TATTGCACCACTTCGTTGTGGCAACAACAAATGTTGGTGAGGATGTaGAGTAAGTGGAACTCCCAGATCTTACTCAGAGAAGTAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YCTTSLWQQQMLVRM*SKWNSQILLREVGN Trigger: ATTACCTACTTCTCTGAGTAAGATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGTGGTGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS GCA 90 bp | TGTTGGAAAACAGAAGATGAGGCTGTCGAAGTAGCACCACGGAGTTaGAAAAGCTTACAAGGTAAATATAAAGGTATGACTACCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWKTEDEAVEVAPRS*KSLQGKYKGMTTSF Trigger: GAAGGAGGTAGTCATACCTTTATATTTACCTTGTAAGCTTTTGCAACTCCGTGGTGCTACTTCGACAGCCTCATCTTCTGTTTTCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511419.5 |
||
| CDS TCA 90 bp | CTTCACACCACACTTTGGAAAAGACTGGTATCTATTGTTTTCTTCTaGATATGCCCATTGAGCTGTCTGTTTCCAGCATTCCCAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHTTLWKRLVSIVFF*ICPLSCLFPAFPRF Trigger: AAACCTTGGGAATGCTGGAAACAGACAGCTCAATGGGCATATTCAGAAGAAAACAATAGATACCAGTCTTTTCCAAAGTGTGGTGTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000584829.1 ENST00000653515.1 |
||
| CDS CCA 90 bp | GGAACAGCTATTGATGGATATTCTCCTTCTTTATTTGGGAGTCTCTaGACAGGGCAGTCTCATTGTCACTTCTCTCTTTGTTCATTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTAIDGYSPSLFGSL*TGQSHCHFSLCSLN Trigger: GTTTAATGAACAAAGAGAGAAGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGAATATCCATCAATAGCTGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511419.5 |
||
| CDS TCA 90 bp | AATGCAGGAAGGATTGCTTTGATAATTGCCAAAGCTCTTCTCAAATaGGTTGCTATGATTACAAGAGCTTTGCTAATTCCACTTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NAGRIALIIAKALLK*VAMITRALLIPLSH Trigger: GTGGGAAAGTGGAATTAGCAAAGCTCTTGTAATCATAGCAACTCATTTGAGAAGAGCTTTGGCAATTATCAAAGCAATCCTTCCTGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000584829.1 ENST00000653515.1 ENST00000665191.1 |
||
| CDS GCA 90 bp | AGGAAGGATTGCTTTGATAATTGCCAAAGCTCTTCTCAAATGAGTTaGTATGATTACAAGAGCTTTGCTAATTCCACTTTCCCACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKDCFDNCQSSSQMS*YDYKSFANSTFPLL Trigger: AAGGAGTGGGAAAGTGGAATTAGCAAAGCTCTTGTAATCATAGCAACTCATTTGAGAAGAGCTTTGGCAATTATCAAAGCAATCCTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000584829.1 ENST00000653515.1 ENST00000665191.1 |
||
| CDS TCA 90 bp | AAATATAAAGGTATGACTACCTCCTTCTACCAGAGTTTCTCCTTCTaGGAGCTTTTGTTTGATCCACAAAAATGCACTTATTCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYKGMTTSFYQSFSF*ELLFDPQKCTYSDS Trigger: GGAGTCTGAATAAGTGCATTTTTGTGGATCAAACAAAAGCTCTCAGAAGGAGAAACTCTGGTAGAAGGAGGTAGTCATACCTTTATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511419.5 |
||
| CDS GCA 90 bp | ACTGGAAGGGGACATGAAGTAATTTCCTGGGTGATAAAAATGTTCTaGATCATGATAGTGTTGTTTACATGGATGTATATAGTTGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGRGHEVISWVIKMF*IMIVLFTWMYIVAK Trigger: TTTAGCAACTATATACATCCATGTAAACAACACTATCATGATGCAGAACATTTTTATCACCCAGGAAATTACTTCATGTCCCCTTCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | AAGAAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACTGTCCCTAGAGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: KKFHMAGEASES*QEVKGTVPRGK Trigger: CTTACCTCTAGGGACAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS TCA 72 bp | ACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGTaGAAGGCACTTCTTACATTGCAGCAGCAAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TWLGRPQNHGRR*KALLTLQQQEK Trigger: TTTCTCTTGCTGCTGCAATGTAAGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522300.5 |
||
| CDS GCA 72 bp | CTCAGTCTCACCAGTCGTGTCACTCCCACCAACTGCTaGAGAGACACACTCAGGAAAATCTTATTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSLTSRVTPTNC*RDTLRKILLGA Trigger: AGCTCCCAATAAGATTTTCCTGAGTGTGTCTCTGCAGCAGTTGGTGGGAGTGACACGACTGGTGAGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506723.6 |
||
| CDS CCA 72 bp | TTCACACCACACTTTGGAAAAGAAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTPHFGKEVPHG*GGLRIMAGGER Trigger: CCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTTCTTTTCCAAAGTGTGGTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS CCA 72 bp | GATGGAGCCGCCTTAGGGTTCTCGGATCTTAGAGTCTaGCTTCTAGCATGTCCAGATGTACTCTATCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGAALGFSDLRV*LLACPDVLYQD Trigger: ATCCTGATAGAGTACATCTGGACATGCTAGAAGCCAGACTCTAAGATCCGAGAACCCTAAGGCGGCTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CCA 72 bp | GCATTTGGCAACACTCCTGACGTGAGTGACATTAGCTaGAGCACAAATCAGGTAGCATCTGCTTCATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AFGNTPDVSDIS*STNQVASASSL Trigger: GAGAGATGAAGCAGATGCTACCTGATTTGTGCTCCAGCTAATGTCACTCACGTCAGGAGTGTTGCCAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659362.1 ENST00000663464.1 |
||
| CDS CCA 72 bp | GTCTTTCCTTGTGGCTGGACCTATACCATGAAAACTTaGATTATCTTGTCTTCCACCAGGCAGACTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VFPCGWTYTMKT*IILSSTRQTGR Trigger: CCTCCCAGTCTGCCTGGTGGAAGACAAGATAATCCAAGTTTTCATGGTATAGGTCCAGCCACAAGGAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS GCA 72 bp | ATACCCGAGACTGTCCCTAGAGGTAAGAAGTACCCTTaGACCATCACTGAGTTTGGATTAGTTCTCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: IPETVPRGKKYP*TITEFGLVLSR Trigger: ACGTGAGAGAACTAATCCAAACTCAGTGATGGTGCAAGGGTACTTCTTACCTCTAGGGACAGTCTCGGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584829.1 ENST00000653515.1 |
||
| CDS GCA 72 bp | GTGAAAGGCACTGTCCCTAGAGGTAAGAAGTACCCTTaGACCATCACTGAGTTTGGATTAGTTCTCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: VKGTVPRGKKYP*TITEFGLVLSR Trigger: ACGTGAGAGAACTAATCCAAACTCAGTGATGGTGCAAGGGTACTTCTTACCTCTAGGGACAGTGCCTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS CAA 72 bp | AGCAAGATCTTGGTGATCAATAGGTTGACTTGGGGCTaGCCAGAAAGTCACTCGAGTGACATCCAGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SKILVINRLTWG*PESHSSDIQET Trigger: TGTTTCCTGGATGTCACTCGAGTGACTTTCTGGCAAGCCCCAAGTCAACCTATTGATCACCAAGATCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653515.1 ENST00000665191.1 |
||
| CDS CAA 72 bp | AGTCTTTCCTTGTGGCTGGACCTATACCATGAAAACTaGGATTATCTTGTCTTCCACCAGGCAGACTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLWLDLYHEN*DYLVFHQADWE Trigger: CTCCCAGTCTGCCTGGTGGAAGACAAGATAATCCAAGTTTTCATGGTATAGGTCCAGCCACAAGGAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CAA 90 bp | TCAGGAATCAGTCTTTCCTTGTGGCTGGACCTATACCATGAAAACTaGGATTATCTTGTCTTCCACCAGGCAGACTGGGAGGTAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SGISLSLWLDLYHEN*DYLVFHQADWEVKE Trigger: TTCCTTTACCTCCCAGTCTGCCTGGTGGAAGACAAGATAATCCAAGTTTTCATGGTATAGGTCCAGCCACAAGGAAAGACTGATTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS TCA 72 bp | ATTGCACCACTTCGTTGTGGCAACAACAAATGTTGGTaGGGATGTGGAGTAAGTGGAACTCCCAGATCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IAPLRCGNNKCW*GCGVSGTPRSY Trigger: GTAAGATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGTGGTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | TGTCCCTTTCAGACTACCATCTTCTCTCCTTCCAGGTaGTGTATCAGGAATGTCACAGGAGATGTCATTACA | + |
|
Preference number: 6 (lower is better) Translates to: CPFQTTIFSPSR*CIRNVTGDVIT Trigger: TGTAATGACATCTCCTGTGACATTCCTGATACACCACCTGGAAGGAGAGAAGATGGTAGTCTGAAAGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522300.5 ENST00000663464.1 |
||
| CDS CCA 72 bp | TTCCACTTTCCCACTCCTTCTTTATTTGGGAGTCTCTaGACAGGGCAGTCTCATTGTCACTTCTCTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FHFPTPSLFGSL*TGQSHCHFSLC Trigger: ACAAAGAGAGAAGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGTGGGAAAGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000584829.1 ENST00000653515.1 ENST00000665191.1 |
||
| CDS CCA 72 bp | ATGAGAACTGATCCACCATCTATTGGGCCAAAGGAGTaGGCCTCAGGCATGATGTCTAAAATTCATACACAC | + |
|
Preference number: 6 (lower is better) Translates to: MRTDPPSIGPKE*ASGMMSKIHTH Trigger: GTGTGTATGAATTTTAGACATCATGCCTGAGGCCCACTCCTTTGGCCCAATAGATGGTGGATCAGTTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CAA 72 bp | AACTATTGCACCACTTCGTTGTGGCAACAACAAATGTaGGTGAGGATGTGGAGTAAGTGGAACTCCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: NYCTTSLWQQQM*VRMWSKWNSQI Trigger: GATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGTGGTGCAATAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CAA 72 bp | TCACAGGAGATGTCATTACAGAGACTCCTTCTTTATTaGGGAGTCTCTGGACAGGGCAGTCTCATTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SQEMSLQRLLLY*GVSGQGSLIVT Trigger: AGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGTCTCTGTAATGACATCTCCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522300.5 ENST00000663464.1 |
||
| CDS CAA 72 bp | TTAAATTTACAGGAGCAGTACTCTTCACACCACACTTaGGAAAAGAAGTTCCACATGGCTGGGGAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LNLQEQYSSHHT*EKKFHMAGEAS Trigger: TGAGGCCTCCCCAGCCATGTGGAACTTCTTTTCCAAAGTGTGGTGTGAAGAGTACTGCTCCTGTAAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663464.1 ENST00000665191.1 |
||
| CDS CAA 90 bp | TCAGGAATGTCACAGGAGATGTCATTACAGAGACTCCTTCTTTATTaGGGAGTCTCTGGACAGGGCAGTCTCATTGTCACTTCTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGMSQEMSLQRLLLY*GVSGQGSLIVTSLF Trigger: AAAGAGAGAAGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGTCTCTGTAATGACATCTCCTGTGACATTCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522300.5 ENST00000663464.1 |
||
| CDS CCA 72 bp | ACTTCGTTGTGGCAACAACAAATGTTGGTGAGGATGTaGAGTAAGTGGAACTCCCAGATCTTACTCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSLWQQQMLVRM*SKWNSQILLRE Trigger: TTCTCTGAGTAAGATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | GTCATTACAGAGACTCCTTCTTTATTTGGGAGTCTCTaGACAGGGCAGTCTCATTGTCACTTCTCTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VITETPSLFGSL*TGQSHCHFSLC Trigger: ACAAAGAGAGAAGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGTCTCTGTAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522300.5 ENST00000663464.1 |
||
| CDS TCA 72 bp | GTTTCCTGTGGAGAGTGGATTGACTGGAAGGGGACATaGAGTAATTTCCTGGGTGATAAAAATGTTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSCGEWIDWKGT*SNFLGDKNVLH Trigger: ATGCAGAACATTTTTATCACCCAGGAAATTACTTCATGTCCCCTTCCAGTCAATCCACTCTCCACAGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS GCA 72 bp | TCTCTTCCAGGATGCCTCACTTTCCAGATTCCAAGATaGCTCATTCTCCAGATGCATTCGTGTTTATTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SLPGCLTFQIPR*LILQMHSCLFI Trigger: AATGAATAAACACGAATGCATCTGGAGAATGAGGCATCTTGGAATCTGGAAAGTGAGGCATCCTGGAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000503048.1 ENST00000506723.6 ENST00000522300.5 ENST00000663464.1 |
||
| CDS CCA 72 bp | TGGCAACAACAAATGTTGGTGAGGATGTGGAGTAAGTaGAACTCCCAGATCTTACTCAGAGAAGTAGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: WQQQMLVRMWSK*NSQILLREVGN Trigger: ATTACCTACTTCTCTGAGTAAGATCTGGGAGTTCCACTTACTCCACATCCTCACCAACATTTGTTGTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | ATTGATGGATATTCTCCTTCTTTATTTGGGAGTCTCTaGACAGGGCAGTCTCATTGTCACTTCTCTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: IDGYSPSLFGSL*TGQSHCHFSLC Trigger: ACAAAGAGAGAAGTGACAATGAGACTGCCCTGTCCAGAGACTCCCAAATAAAGAAGGAGAATATCCATCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511419.5 |
||
| CDS TCA 72 bp | GGTATGACTACCTCCTTCTACCAGAGTTTCTCCTTCTaGGAGCTTTTGTTTGATCCACAAAAATGCACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GMTTSFYQSFSF*ELLFDPQKCTY Trigger: ATAAGTGCATTTTTGTGGATCAAACAAAAGCTCTCAGAAGGAGAAACTCTGGTAGAAGGAGGTAGTCATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511419.5 |
||
| CDS TCA 72 bp | GACTGGTATCTATTGTTTTCTTCTGAATATGCCCATTaGGCTGTCTGTTTCCAGCATTCCCAAGGTTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DWYLLFSSEYAH*AVCFQHSQGFS Trigger: AGAAAAACCTTGGGAATGCTGGAAACAGACAGCTCAATGGGCATATTCAGAAGAAAACAATAGATACCAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000584829.1 ENST00000653515.1 |
||
| CDS CCA 72 bp | ATATCCATTTCATTAATTCTTCTTCGCGTTTGGTTCTaGACATCTTGGAGCTTGAACCTTCATCTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISISLILLRVWF*TSWSLNLHLSS Trigger: GGAAGAGAGATGAAGGTTCAAGCTCCAAGATGTCCAGAACCAAACGCGAAGAAGAATTAATGAAATGGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503048.1 ENST00000522300.5 |
||
| CDS CCA 72 bp | AGTGGATTGACTGGAAGGGGACATGAAGTAATTTCCTaGGTGATAAAAATGTTCTGCATCATGATAGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLTGRGHEVIS*VIKMFCIMIVL Trigger: CAACACTATCATGATGCAGAACATTTTTATCACCCAGGAAATTACTTCATGTCCCCTTCCAGTCAATCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | GGAAATGAGAATCAGGAATCAGTCTTTCCTTGTGGCTaGACCTATACCATGAAAACTTGGATTATCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNENQESVFPCG*TYTMKTWIILS Trigger: AGACAAGATAATCCAAGTTTTCATGGTATAGGTCCAGCCACAAGGAAAGACTGATTCCTGATTCTCATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663464.1 |
||
| CDS CAA 90 bp | AACTCCCAGATCTTACTCAGAGAAGTAGGTAATGGAGCATCCAGTTaGGAAAACAGCTTGATGATTTTCATAAAGTTAAGCATATACCTC | + |
|
Preference number: 6 (lower is better) Translates to: NSQILLREVGNGASS*ENSLMIFIKLSIYL Trigger: GAGGTATATGCTTAACTTTATGAAAATCATCAAGCTGTTTTCCAAACTGGATGCTCCATTACCTACTTCTCTGAGTAAGATCTGGGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | TGTATACTTGGCAATGTGGTTTACTTGCCTGCACATTaGCACCTTTATCTCTTTAATGGATTATTACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CILGNVVYLPAH*HLYLFNGLLLD Trigger: ATCCAGTAATAATCCATTAAAGAGATAAAGGTGCCAATGTGCAGGCAAGTAAACCACATTGCCAAGTATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000503048.1 ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CCA 72 bp | ACGAAAATAAAAATAAACTATTGCACCACTTCGTTGTaGCAACAACAAATGTTGGTGAGGATGTGGAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: TKIKINYCTTSL*QQQMLVRMWSK Trigger: CTTACTCCACATCCTCACCAACATTTGTTGTTGCCACAACGAAGTGGTGCAATAGTTTATTTTTATTTTCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CAA 72 bp | GAAGTAGGTAATGGAGCATCCAGTTTGGAAAACAGCTaGATGATTTTCATAAAGTTAAGCATATACCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVGNGASSLENS*MIFIKLSIYLC Trigger: ACAGAGGTATATGCTTAACTTTATGAAAATCATCAAGCTGTTTTCCAAACTGGATGCTCCATTACCTACTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||
| CDS CAA 72 bp | ATCTTACTCAGAGAAGTAGGTAATGGAGCATCCAGTTaGGAAAACAGCTTGATGATTTTCATAAAGTTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLREVGNGASS*ENSLMIFIKLS Trigger: GCTTAACTTTATGAAAATCATCAAGCTGTTTTCCAAACTGGATGCTCCATTACCTACTTCTCTGAGTAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506723.6 ENST00000522300.5 ENST00000659362.1 |
||