Pregenerated sensors for LINC01467 (Homo sapiens)
Ensembl gene IDs: ENSG00000258977Ensembl transcript IDs: ENST00000554211.2, ENST00000653859.1, ENST00000670489.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTAAGGCTGCGTGTCTGGAGTTGTTCCTTCTTCCTGGTGGGTTCGTaGTCTTTGCTGGCTTCAGGAGTGAAGCTGCAGACCTTTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LRLRVWSCSFFLVGS*SLLASGVKLQTFVV Trigger: CACCACAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCAGACACGCAGCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS GCA 90 bp | AGCTGTTGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTTGAGCTaGCTTTCCATGGTCCAAACGTGTCCGGAATTGGGTTCTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCCLQGVRLASQMLS*LSMVQTCPELGSWS Trigger: AGACCAAGAACCCAATTCCGGACACGTTTGGACCATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653859.1 ENST00000670489.1 |
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| CDS GCA 90 bp | GATTTGATGGTGACAATTACAGGGCTGTTTTCTGGAAGCAGCTGTTaGCTGCAGGGAGTAAGACTGGCTTCTCAGATGTTGAGCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: DLMVTITGLFSGSSC*LQGVRLASQMLSCL Trigger: AAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCACCATCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS GCA 90 bp | TGGGTTCTTGGTCTTACTGACTTCAAGAATAAAGCCGCGGACCCTTaGGTTGTTACAGTTCTTAAAGGCGGCATGTCCAGAGTTTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: WVLGLTDFKNKAADP*VVTVLKGGMSRVCS Trigger: GGAACAAACTCTGGACATGCCGCCTTTAAGAACTGTAACAACGCAAGGGTCCGCGGCTTTATTCTTGAAGTCAGTAAGACCAAGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CCA 90 bp | GTTGTTCCTGGACTTTCACAAAGATGTTCAAGCATGGCAGAGGGTTaGAAAAGCCAAGAAGCAACCAGTATGTCCCTGCATTACTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VVPGLSQRCSSMAEG*KSQEATSMSLHYCW Trigger: CCAGCAGTAATGCAGGGACATACTGGTTGCTTCTTGGCTTTTCCAACCCTCTGCCATGCTTGAACATCTTTGTGAAAGTCCAGGAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS CCA 90 bp | ACCCTAAGTAGTAATAATTTCAGACAGGAAGAAGCCATGCTGATTTaGATGTTCTTAGTCACGGATTATGAGGGTAATCACTCAACAGAC | + |
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Preference number: 5 (lower is better) Translates to: TLSSNNFRQEEAMLI*MFLVTDYEGNHSTD Trigger: GTCTGTTGAGTGATTACCCTCATAATCCGTGACTAAGAACATCCAAATCAGCATGGCTTCTTCCTGTCTGAAATTATTACTACTTAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CCA 72 bp | CGTGTCTGGAGTTGTTCCTTCTTCCTGGTGGGTTCGTaGTCTTTGCTGGCTTCAGGAGTGAAGCTGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: RVWSCSFFLVGS*SLLASGVKLQT Trigger: GGTCTGCAGCTTCACTCCTGAAGCCAGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCAGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 90 bp | GGAAGCAGCTGTTGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTaGAGCTGCCTTTCCATCTGGGTCCAAACGTGTCCGGAATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSSCCLQGVRLASQM*SCLSIWVQTCPELG Trigger: ACCCAATTCCGGACACGTTTGGACCCAGATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554211.2 |
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| CDS CAA 72 bp | TGTTGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTaGAGCTGCCTTTCCATCTGGGTCCAAACGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: CCLQGVRLASQM*SCLSIWVQTCP Trigger: CGGACACGTTTGGACCCAGATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554211.2 |
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| CDS CAA 90 bp | CTGCGTGTCTGGAGTTGTTCCTTCTTCCTGGTGGGTTCGTGGTCTTaGCTGGCTTCAGGAGTGAAGCTGCAGACCTTTGTGGTGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LRVWSCSFFLVGSWS*LASGVKLQTFVVSV Trigger: AACACTCACCACAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCAGACACGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 90 bp | ACCTTGGCAGTGAGTGTTACAGCTCTTAAGGCTGCGTGTCTGGAGTaGTTCCTTCTTCCTGGTGGGTTCGTGGTCTTTGCTGGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TLAVSVTALKAACLE*FLLPGGFVVFAGFR Trigger: CCTGAAGCCAGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCAGACACGCAGCCTTAAGAGCTGTAACACTCACTGCCAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 90 bp | GGAAGCAGCTGTTGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTaGAGCTGCCTTTCCATGGTCCAAACGTGTCCGGAATTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSCCLQGVRLASQM*SCLSMVQTCPELGS Trigger: AGAACCCAATTCCGGACACGTTTGGACCATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653859.1 ENST00000670489.1 |
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| CDS GCA 72 bp | CTGCAGGGAGTAAGACTGGCTTCTCAGATGTTGAGCTaGCTTTCCATCTGGGTCCAAACGTGTCCGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: LQGVRLASQMLS*LSIWVQTCPEL Trigger: CAATTCCGGACACGTTTGGACCCAGATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554211.2 |
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| CDS GCA 72 bp | CTGCAGGGAGTAAGACTGGCTTCTCAGATGTTGAGCTaGCTTTCCATGGTCCAAACGTGTCCGGAATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LQGVRLASQMLS*LSMVQTCPELG Trigger: ACCCAATTCCGGACACGTTTGGACCATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 72 bp | TGGAGTTGTTCCTTCTTCCTGGTGGGTTCGTGGTCTTaGCTGGCTTCAGGAGTGAAGCTGCAGACCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: WSCSFFLVGSWS*LASGVKLQTFV Trigger: CACAAAGGTCTGCAGCTTCACTCCTGAAGCCAGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 72 bp | TGTTGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTaGAGCTGCCTTTCCATGGTCCAAACGTGTCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: CCLQGVRLASQM*SCLSMVQTCPE Trigger: TTCCGGACACGTTTGGACCATGGAAAGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 90 bp | GAGCTGCCTTTCCATCTGGGTCCAAACGTGTCCGGAATTGGGTTCTaGGTCTTACTGACTTCAAGAATAAAGCCGCGGACCCTTGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: ELPFHLGPNVSGIGF*VLLTSRIKPRTLAL Trigger: CAACGCAAGGGTCCGCGGCTTTATTCTTGAAGTCAGTAAGACCAAGAACCCAATTCCGGACACGTTTGGACCCAGATGGAAAGGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554211.2 |
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| CDS CAA 72 bp | GTGAGTGTTACAGCTCTTAAGGCTGCGTGTCTGGAGTaGTTCCTTCTTCCTGGTGGGTTCGTGGTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VSVTALKAACLE*FLLPGGFVVFA Trigger: AGCAAAGACCACGAACCCACCAGGAAGAAGGAACAACTCCAGACACGCAGCCTTAAGAGCTGTAACACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 90 bp | GGATTTGATGGTGACAATTACAGGGCTGTTTTCTGGAAGCAGCTGTaGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTTGAGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: GFDGDNYRAVFWKQL*PAGSKTGFSDVELP Trigger: AGGCAGCTCAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCACCATCAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS GCA 72 bp | GTGACAATTACAGGGCTGTTTTCTGGAAGCAGCTGTTaGCTGCAGGGAGTAAGACTGGCTTCTCAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: VTITGLFSGSSC*LQGVRLASQML Trigger: CAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS GCA 72 bp | GGTGAAGTAATAGGGCTGTTTTCTGGAAGCAGCTGTTaGCTGCAGGGAGTAAGACTGGCTTCTCAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: GEVIGLFSGSSC*LQGVRLASQML Trigger: CAACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTATTACTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653859.1 |
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| CDS CAA 72 bp | TTCCATCTGGGTCCAAACGTGTCCGGAATTGGGTTCTaGGTCTTACTGACTTCAAGAATAAAGCCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: FHLGPNVSGIGF*VLLTSRIKPRT Trigger: GGTCCGCGGCTTTATTCTTGAAGTCAGTAAGACCAAGAACCCAATTCCGGACACGTTTGGACCCAGATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554211.2 |
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| CDS CAA 72 bp | GGTGACAATTACAGGGCTGTTTTCTGGAAGCAGCTGTaGCCTGCAGGGAGTAAGACTGGCTTCTCAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: GDNYRAVFWKQL*PAGSKTGFSDV Trigger: AACATCTGAGAAGCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS TCA 72 bp | CAAGAAGCAACCAGTATGTCCCTGCATTACTGCTGGTaGTTCAGCTATGACTTCTGGTGTGGGACCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: QEATSMSLHYCW*FSYDFWCGTNF Trigger: GAAGTTGGTCCCACACCAGAAGTCATAGCTGAATCACCAGCAGTAATGCAGGGACATACTGGTTGCTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS GCA 72 bp | GGTCTTACTGACTTCAAGAATAAAGCCGCGGACCCTTaGGTTGTTACAGTTCTTAAAGGCGGCATGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GLTDFKNKAADP*VVTVLKGGMSR Trigger: TCTGGACATGCCGCCTTTAAGAACTGTAACAACGCAAGGGTCCGCGGCTTTATTCTTGAAGTCAGTAAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CCA 72 bp | TATGGATTTGATGGTGACAATTACAGGGCTGTTTTCTaGAAGCAGCTGTTGCCTGCAGGGAGTAAGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: YGFDGDNYRAVF*KQLLPAGSKTG Trigger: GCCAGTCTTACTCCCTGCAGGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCACCATCAAATCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS CAA 90 bp | TGTTGTTCCTGGACTTTCACAAAGATGTTCAAGCATGGCAGAGGGTaGGAAAAGCCAAGAAGCAACCAGTATGTCCCTGCATTACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CCSWTFTKMFKHGRG*EKPRSNQYVPALLL Trigger: CAGCAGTAATGCAGGGACATACTGGTTGCTTCTTGGCTTTTCCAACCCTCTGCCATGCTTGAACATCTTTGTGAAAGTCCAGGAACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS CCA 72 bp | AGTGTTACAGCTCATAAACACAGTGTAAACGCAGCGTaGACCCAAAGAGTGAGCAGCAGCAAGATTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: SVTAHKHSVNAA*TQRVSSSKIHC Trigger: GCAATGAATCTTGCTGCTGCTCACTCTTTGGGTCCACGCTGCGTTTACACTGTGTTTATGAGCTGTAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS CAA 72 bp | AGCGTGGACCCAAAGAGTGAGCAGCAGCAAGATTCATaGCAAAGAGCAAAAGAACTAAAGCTTCCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: SVDPKSEQQQDS*QRAKELKLPHW Trigger: CCAGTGTGGAAGCTTTAGTTCTTTTGCTCTTTGCAATGAATCTTGCTGCTGCTCACTCTTTGGGTCCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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| CDS TCA 72 bp | CAGTATGTCCCTGCATTACTGCTGGTGATTCAGCTATaGCTTCTGGTGTGGGACCAACTTCCCTTGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: QYVPALLLVIQL*LLVWDQLPLKI Trigger: TATTTTCAAGGGAAGTTGGTCCCACACCAGAAGTCATAGCTGAATCACCAGCAGTAATGCAGGGACATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS CCA 72 bp | TTGTTGTTCCTGGACTTTCACAAAGATGTTCAAGCATaGCAGAGGGTTGGAAAAGCCAAGAAGCAACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LLFLDFHKDVQA*QRVGKAKKQPV Trigger: TACTGGTTGCTTCTTGGCTTTTCCAACCCTCTGCCATGCTTGAACATCTTTGTGAAAGTCCAGGAACAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554211.2 ENST00000670489.1 |
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| CDS CCA 72 bp | AGTAATAATTTCAGACAGGAAGAAGCCATGCTGATTTaGATGTTCTTAGTCACGGATTATGAGGGTAATCAC | + |
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Preference number: 6 (lower is better) Translates to: SNNFRQEEAMLI*MFLVTDYEGNH Trigger: GTGATTACCCTCATAATCCGTGACTAAGAACATCCAAATCAGCATGGCTTCTTCCTGTCTGAAATTATTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554211.2 ENST00000653859.1 ENST00000670489.1 |
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