Pregenerated sensors for LINC01465 (Homo sapiens)
Ensembl gene IDs: ENSG00000221949Ensembl transcript IDs: ENST00000408887.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCTTGGCTGCTGTTTGGCGGAGCCGGCGGCAGCCTCTGCGGGATaGCCGCCGGCGATTATCGGCGCCGAGAGCGGGCCGGCGGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: CLGCCLAEPAAASAG*PPAIIGAESGPAAG Trigger: ACCCGCCGCCGGCCCGCTCTCGGCGCCGATAATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | CCGACGTCGGCGGCGAGGAAGGACGGAGGAGCGCCGGAGCCGCTTTaGTGCCCTCCGCGTGGTCCCGTGCCTCCCCGACACCATGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PTSAARKDGGAPEPL*CPPRGPVPPRHHGP Trigger: AGGGCCATGGTGTCGGGGAGGCACGGGACCACGCGGAGGGCAGCAAAGCGGCTCCGGCGCTCCTCCGTCCTTCCTCGCCGCCGACGTCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | CCGGCTATGCCTTGGCTGCTGTTTGGCGGAGCCGGCGGCAGCCTCTaGGGGATGCCCGCCGGCGATTATCGGCGCCGAGAGCGGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PAMPWLLFGGAGGSL*GMPAGDYRRRERAG Trigger: GCCGGCCCGCTCTCGGCGCCGATAATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | TGCTGGGGAACGGGTGGCCTGGGGACTTCCCGGCTATGCCTTGGCTaGTGTTTGGCGGAGCCGGCGGCAGCCTCTGCGGGATGCCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: CWGTGGLGTSRLCLG*CLAEPAAASAGCPP Trigger: CGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTCCCCAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 90 bp | GAACGGGTGGCCTGGGGACTTCCCGGCTATGCCTTGGCTGCTGTTTaGCGGAGCCGGCGGCAGCCTCTGCGGGATGCCCGCCGGCGATTA | + |
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Preference number: 5 (lower is better) Translates to: ERVAWGLPGYALAAV*RSRRQPLRDARRRL Trigger: TAATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 90 bp | TCTCTCCGCAGGACACCGCCGCTTTTCTCTCTTCAGAGCGGTGGCTaGCGTACAGAACGCCGGCTGTATCACCCGGGCGCCGGCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SLRRTPPLFSLQSGG*RTERRLYHPGAGAA Trigger: GGCGGCGCCGGCGCCCGGGTGATACAGCCGGCGTTCTGTACGTCAGCCACCGCTCTGAAGAGAGAAAAGCGGCGGTGTCCTGCGGAGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 90 bp | CGGCTCTCTCCGCAGGACACCGCCGCTTTTCTCTCTTCAGAGCGGTaGCTGACGTACAGAACGCCGGCTGTATCACCCGGGCGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RLSPQDTAAFLSSER*LTYRTPAVSPGRRR Trigger: GCGCCGGCGCCCGGGTGATACAGCCGGCGTTCTGTACGTCAGCCACCGCTCTGAAGAGAGAAAAGCGGCGGTGTCCTGCGGAGAGAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 90 bp | GTGTCTGACTGCGCTTTTGCCGCCCATTTCCTGCTTTCGAGCGGCTaGGGCGACGCGCTCCCCTCGGGCAGTGGAGGGAGCGGCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VSDCAFAAHFLLSSG*GDALPSGSGGSGSL Trigger: GAGAGAGCCGCTCCCTCCACTGCCCGAGGGGAGCGCGTCGCCTCAGCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 90 bp | GCGGGAGCGCTGCTCGCTGCCTCTCGGGGGCAGTCCAGAACCAGTTaGTGTCTGACTGCGCTTTTGCCGCCCATTTCCTGCTTTCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: AGALLAASRGQSRTS*CLTALLPPISCFRA Trigger: CGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGACTGCCCCCGAGAGGCAGCGAGCAGCGCTCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 90 bp | CGCTGCTCGCTGCCTCTCGGGGGCAGTCCAGAACCAGTTGGTGTCTaGCTGCGCTTTTGCCGCCCATTTCCTGCTTTCGAGCGGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RCSLPLGGSPEPVGV*LRFCRPFPAFERLR Trigger: CCTCAGCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGACTGCCCCCGAGAGGCAGCGAGCAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | TCCAGAACCAGTTGGTGTCTGACTGCGCTTTTGCCGCCCATTTCCTaGTTTCGAGCGGCTGAGGCGACGCGCTCCCCTCGGGCAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SRTSWCLTALLPPIS*FRAAEATRSPRAVE Trigger: CTCCACTGCCCGAGGGGAGCGCGTCGCCTCAGCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | CACGGCAGCCACCCCGCGTGGGTGGGGCTCGTATGGTTGTGTCCTTaGTGGTTGGGAAAGGAGGTGCCGGAAACTTCAAACCACGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HGSHPAWVGLVWLCP*WLGKEVPETSNHGQ Trigger: CTGGCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGGCTGCCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 90 bp | CGCCTGTTTTCTGCGGAATGTAGCACGGCAGCCACCCCGCGTGGGTaGGGCTCGTATGGTTGTGTCCTTGCTGGTTGGGAAAGGAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: RLFSAECSTAATPRG*GSYGCVLAGWERRC Trigger: GCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGGCTGCCGTGCTACATTCCGCAGAAAACAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 90 bp | GGGTGGGGCTCGTATGGTTGTGTCCTTGCTGGTTGGGAAAGGAGGTaGCGGAAACTTCAAACCACGGCCAGGGTACAACGTGTCCGCTTA | + |
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Preference number: 5 (lower is better) Translates to: GWGSYGCVLAGWERR*RKLQTTARVQRVRL Trigger: TAAGCGGACACGTTGTACCCTGGCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | GCCGACGTCGGCGGCGAGGAAGGACGGAGGAGCGCCGGAGCCGCTTaGCTGCCCTCCGCGTGGTCCCGTGCCTCCCCGACACCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ADVGGEEGRRSAGAA*LPSAWSRASPTPWP Trigger: GGGCCATGGTGTCGGGGAGGCACGGGACCACGCGGAGGGCAGCAAAGCGGCTCCGGCGCTCCTCCGTCCTTCCTCGCCGCCGACGTCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | GCGGCGAGGAAGGACGGAGGAGCGCCGGAGCCGCTTTaGTGCCCTCCGCGTGGTCCCGTGCCTCCCCGACAC | + |
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Preference number: 6 (lower is better) Translates to: AARKDGGAPEPL*CPPRGPVPPRH Trigger: GTGTCGGGGAGGCACGGGACCACGCGGAGGGCAGCAAAGCGGCTCCGGCGCTCCTCCGTCCTTCCTCGCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | TGCTGTTTGGCGGAGCCGGCGGCAGCCTCTGCGGGATaGCCGCCGGCGATTATCGGCGCCGAGAGCGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: CCLAEPAAASAG*PPAIIGAESGP Trigger: CGGCCCGCTCTCGGCGCCGATAATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | GGCGGCGAGGAAGGACGGAGGAGCGCCGGAGCCGCTTaGCTGCCCTCCGCGTGGTCCCGTGCCTCCCCGACA | + |
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Preference number: 6 (lower is better) Translates to: GGEEGRRSAGAA*LPSAWSRASPT Trigger: TGTCGGGGAGGCACGGGACCACGCGGAGGGCAGCAAAGCGGCTCCGGCGCTCCTCCGTCCTTCCTCGCCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | GCGAGGAAGGACGGAGGAGCGCCGGAGCCGCTTTGCTaGCCTCCGCGTGGTCCCGTGCCTCCCCGACACCAT | + |
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Preference number: 6 (lower is better) Translates to: ARKDGGAPEPLC*PPRGPVPPRHH Trigger: ATGGTGTCGGGGAGGCACGGGACCACGCGGAGGGCAGCAAAGCGGCTCCGGCGCTCCTCCGTCCTTCCTCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | CCTTGGCTGCTGTTTGGCGGAGCCGGCGGCAGCCTCTaGGGGATGCCCGCCGGCGATTATCGGCGCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PWLLFGGAGGSL*GMPAGDYRRRE Trigger: CTCTCGGCGCCGATAATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | GCCTGGGGACTTCCCGGCTATGCCTTGGCTGCTGTTTaGCGGAGCCGGCGGCAGCCTCTGCGGGATGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: AWGLPGYALAAV*RSRRQPLRDAR Trigger: GCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | GGCCTGGGGACTTCCCGGCTATGCCTTGGCTGCTGTTaGGCGGAGCCGGCGGCAGCCTCTGCGGGATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: GLGTSRLCLGCC*AEPAAASAGCP Trigger: CGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | GGAACGGGTGGCCTGGGGACTTCCCGGCTATGCCTTGGCTGCTGTTaGGCGGAGCCGGCGGCAGCCTCTGCGGGATGCCCGCCGGCGATT | + |
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Preference number: 6 (lower is better) Translates to: GTGGLGTSRLCLGCC*AEPAAASAGCPPAI Trigger: AATCGCCGGCGGGCATCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | TGGCGGCAGCTCCTAGCGGGCGAAGCGCGGGAGCGCTaGTCGCTGCCTCTCGGGGGCAGTCCAGAACCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WRQLLAGEARER*SLPLGGSPEPV Trigger: AACTGGTTCTGGACTGCCCCCGAGAGGCAGCGAGCAGCGCTCCCGCGCTTCGCCCGCTAGGAGCTGCCGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | ACGGGTGGCCTGGGGACTTCCCGGCTATGCCTTGGCTaGTGTTTGGCGGAGCCGGCGGCAGCCTCTGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: TGGLGTSRLCLG*CLAEPAAASAG Trigger: TCCCGCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | TGCTGGGGAACGGGTGGCCTGGGGACTTCCCGGCTATaGCTTGGCTGCTGTTTGGCGGAGCCGGCGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CWGTGGLGTSRL*LGCCLAEPAAA Trigger: GGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTCCCCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | GGGAACGGGTGGCCTGGGGACTTCCCGGCTATGCCTTaGCTGCTGTTTGGCGGAGCCGGCGGCAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GNGWPGDFPAMP*LLFGGAGGSLC Trigger: GCAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | GGGGAACGGGTGGCCTGGGGACTTCCCGGCTATGCCTaGGCTGCTGTTTGGCGGAGCCGGCGGCAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GERVAWGLPGYA*AAVWRSRRQPL Trigger: CAGAGGCTGCCGCCGGCTCCGCCAAACAGCAGCCAAGGCATAGCCGGGAAGTCCCCAGGCCACCCGTTCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | CCGGACGCACAGGAGCAGCGGAGCGCGAGACGGGTCTaGTGTCCGCACGCGTCGAGTCGTCGCAGTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PDAQEQRSARRV*CPHASSRRSRH Trigger: GTGGCGACTGCGACGACTCGACGCGTGCGGACACAAGACCCGTCTCGCGCTCCGCTGCTCCTGTGCGTCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | AAGGTTCGTCCGGACGCACAGGAGCAGCGGAGCGCGAGACGGGTCTaGTGTCCGCACGCGTCGAGTCGTCGCAGTCGCCACCCGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: KVRPDAQEQRSARRV*CPHASSRRSRHPGH Trigger: ATGGCCCGGGTGGCGACTGCGACGACTCGACGCGTGCGGACACAAGACCCGTCTCGCGCTCCGCTGCTCCTGTGCGTCCGGACGAACCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 72 bp | TGCGCTTTTGCCGCCCATTTCCTGCTTTCGAGCGGCTaGGGCGACGCGCTCCCCTCGGGCAGTGGAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CAFAAHFLLSSG*GDALPSGSGGS Trigger: GCTCCCTCCACTGCCCGAGGGGAGCGCGTCGCCTCAGCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | CACGGCAGCCACCCCGCGTGGGTGGGGCTCGTATGGTaGTGTCCTTGCTGGTTGGGAAAGGAGGTGCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: HGSHPAWVGLVW*CPCWLGKEVPE Trigger: TTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGGCTGCCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | CGCGGGAGCGCTGCTCGCTGCCTCTCGGGGGCAGTCCAGAACCAGTaGGTGTCTGACTGCGCTTTTGCCGCCCATTTCCTGCTTTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: RGSAARCLSGAVQNQ*VSDCAFAAHFLLSS Trigger: GCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGACTGCCCCCGAGAGGCAGCGAGCAGCGCTCCCGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 72 bp | AGGACACCGCCGCTTTTCTCTCTTCAGAGCGGTGGCTaGCGTACAGAACGCCGGCTGTATCACCCGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RTPPLFSLQSGG*RTERRLYHPGA Trigger: GGCGCCCGGGTGATACAGCCGGCGTTCTGTACGTCAGCCACCGCTCTGAAGAGAGAAAAGCGGCGGTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 72 bp | CGATGGAGGGCATCGCCCGCTGCCTCAGCACTCTGGTaGCGTGGAATCGGGGTCCCCTCTTTCAGGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RWRASPAASALW*RGIGVPSFRAD Trigger: ATCAGCCCTGAAAGAGGGGACCCCGATTCCACGTCACCAGAGTGCTGAGGCAGCGGGCGATGCCCTCCATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | AGTTGGTGTCTGACTGCGCTTTTGCCGCCCATTTCCTaGTTTCGAGCGGCTGAGGCGACGCGCTCCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SWCLTALLPPIS*FRAAEATRSPR Trigger: CCGAGGGGAGCGCGTCGCCTCAGCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | CCGCAGGACACCGCCGCTTTTCTCTCTTCAGAGCGGTaGCTGACGTACAGAACGCCGGCTGTATCACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PQDTAAFLSSER*LTYRTPAVSPG Trigger: CCCGGGTGATACAGCCGGCGTTCTGTACGTCAGCCACCGCTCTGAAGAGAGAAAAGCGGCGGTGTCCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | TCTGCGGAATGTAGCACGGCAGCCACCCCGCGTGGGTaGGGCTCGTATGGTTGTGTCCTTGCTGGTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SAECSTAATPRG*GSYGCVLAGWE Trigger: TTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGGCTGCCGTGCTACATTCCGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | AGCCACCCCGCGTGGGTGGGGCTCGTATGGTTGTGTCCTTGCTGGTaGGGAAAGGAGGTGCCGGAAACTTCAAACCACGGCCAGGGTACA | + |
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Preference number: 6 (lower is better) Translates to: SHPAWVGLVWLCPCW*GKEVPETSNHGQGT Trigger: TGTACCCTGGCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | CTCTCGGGGGCAGTCCAGAACCAGTTGGTGTCTGACTaGGCTTTTGCCGCCCATTTCCTGCTTTCGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LSGAVQNQLVSD*AFAAHFLLSSG Trigger: GCCGCTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGACTGCCCCCGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS TCA 72 bp | CTGCCTCTCGGGGGCAGTCCAGAACCAGTTGGTGTCTaGCTGCGCTTTTGCCGCCCATTTCCTGCTTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: LPLGGSPEPVGV*LRFCRPFPAFE Trigger: CTCGAAAGCAGGAAATGGGCGGCAAAAGCGCAGTCAGACACCAACTGGTTCTGGACTGCCCCCGAGAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | CACCCCGCGTGGGTGGGGCTCGTATGGTTGTGTCCTTaGTGGTTGGGAAAGGAGGTGCCGGAAACTTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: HPAWVGLVWLCP*WLGKEVPETSN Trigger: GTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | CGTGGGTGGGGCTCGTATGGTTGTGTCCTTGCTGGTTaGGAAAGGAGGTGCCGGAAACTTCAAACCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: RGWGSYGCVLAG*ERRCRKLQTTA Trigger: GGCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | GCGTGGGTGGGGCTCGTATGGTTGTGTCCTTGCTGGTaGGGAAAGGAGGTGCCGGAAACTTCAAACCACGGC | + |
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Preference number: 6 (lower is better) Translates to: AWVGLVWLCPCW*GKEVPETSNHG Trigger: GCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | CCACCCCGCGTGGGTGGGGCTCGTATGGTTGTGTCCTaGCTGGTTGGGAAAGGAGGTGCCGGAAACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PPRVGGARMVVS*LVGKGGAGNFK Trigger: TTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGAGCCCCACCCACGCGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS GCA 72 bp | TCGTATGGTTGTGTCCTTGCTGGTTGGGAAAGGAGGTaGCGGAAACTTCAAACCACGGCCAGGGTACAACGT | + |
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Preference number: 6 (lower is better) Translates to: SYGCVLAGWERR*RKLQTTARVQR Trigger: ACGTTGTACCCTGGCCGTGGTTTGAAGTTTCCGGCACCTCCTTTCCCAACCAGCAAGGACACAACCATACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CCA 72 bp | CGTAAGTTGTCTGGGCCAAAAGCAGAAGTGGCTCCATaGCAGTCAGCCTTCTCCCTAACTTGGCTTAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: RKLSGPKAEVAP*QSAFSLTWLKK Trigger: CTTTTTAAGCCAAGTTAGGGAGAAGGCTGACTGCCATGGAGCCACTTCTGCTTTTGGCCCAGACAACTTACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 90 bp | TCTTACTTTGCCAGAAAGGGAATTATACAAGGATATCTTTATGAGTaGCTGCCAAATTTTGTTCTAGACCACGGCCCTCTGGCCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SYFARKGIIQGYLYE*LPNFVLDHGPLASM Trigger: CATGGAGGCCAGAGGGCCGTGGTCTAGAACAAAATTTGGCAGCAACTCATAAAGATATCCTTGTATAATTCCCTTTCTGGCAAAGTAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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| CDS CAA 72 bp | GCCAGAAAGGGAATTATACAAGGATATCTTTATGAGTaGCTGCCAAATTTTGTTCTAGACCACGGCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ARKGIIQGYLYE*LPNFVLDHGPL Trigger: CAGAGGGCCGTGGTCTAGAACAAAATTTGGCAGCAACTCATAAAGATATCCTTGTATAATTCCCTTTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408887.3 |
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