Pregenerated sensors for LINC01455 (Homo sapiens)
Ensembl gene IDs: ENSG00000250888Ensembl transcript IDs: ENST00000503167.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGAATCAGCATGGGTTTGAGACGCACCTTATCCCAGGTGCTTGCCTaGAACATTCTCAAACAGCCCACACATTCCTCTTTTTCTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: RISMGLRRTLSQVLA*NILKQPTHSSFSPT Trigger: GGTGGGAGAAAAAGAGGAATGTGTGGGCTGTTTGAGAATGTTTCAGGCAAGCACCTGGGATAAGGTGCGTCTCAAACCCATGCTGATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS GCA 90 bp | ATGAAGAATCAGCATGGGTTTGAGACGCACCTTATCCCAGGTGCTTaGCTGAAACATTCTCAAACAGCCCACACATTCCTCTTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: MKNQHGFETHLIPGA*LKHSQTAHTFLFFS Trigger: GGAGAAAAAGAGGAATGTGTGGGCTGTTTGAGAATGTTTCAGGCAAGCACCTGGGATAAGGTGCGTCTCAAACCCATGCTGATTCTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS TCA 90 bp | ACCAGAAACCTCTTCTGTTATCATGATGAAGAATCAGCATGGGTTTaGGACGCACCTTATCCCAGGTGCTTGCCTGAAACATTCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: TRNLFCYHDEESAWV*DAPYPRCLPETFSN Trigger: GTTTGAGAATGTTTCAGGCAAGCACCTGGGATAAGGTGCGTCTCAAACCCATGCTGATTCTTCATCATGATAACAGAAGAGGTTTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS GCA 90 bp | ATCACTCTGGTGGATACAATGTTAACAGCATCACTCGCTTTTCTCTaGCTTACCAGAAACCTCTTCTGTTATCATGATGAAGAATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: ITLVDTMLTASLAFL*LTRNLFCYHDEESA Trigger: TGCTGATTCTTCATCATGATAACAGAAGAGGTTTCTGGTAAGGCAGAGAAAAGCGAGTGATGCTGTTAACATTGTATCCACCAGAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS CCA 72 bp | GCTGAATCCCAAGTGCCTATAGCAAGGCTAGGCGTATaGCAGGCACTCAACACATATTGGCTGTGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: AESQVPIARLGV*QALNTYWLWMR Trigger: CCTCATCCACAGCCAATATGTGTTGAGTGCCTGCCATACGCCTAGCCTTGCTATAGGCACTTGGGATTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS GCA 72 bp | CAGCATGGGTTTGAGACGCACCTTATCCCAGGTGCTTaGCTGAAACATTCTCAAACAGCCCACACATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QHGFETHLIPGA*LKHSQTAHTFL Trigger: GAGGAATGTGTGGGCTGTTTGAGAATGTTTCAGGCAAGCACCTGGGATAAGGTGCGTCTCAAACCCATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS CAA 90 bp | AGTGCCTATAGCAAGGCTAGGCGTATGGCAGGCACTCAACACATATaGGCTGTGGATGAGGTTGCTTCTCTTTTAGCATCACTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SAYSKARRMAGTQHI*AVDEVASLLASLWW Trigger: CCACCAGAGTGATGCTAAAAGAGAAGCAACCTCATCCACAGCCAATATGTGTTGAGTGCCTGCCATACGCCTAGCCTTGCTATAGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS TCA 72 bp | GCGTATGGCAGGCACTCAACACATATTGGCTGTGGATaGGGTTGCTTCTCTTTTAGCATCACTCTGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: AYGRHSTHIGCG*GCFSFSITLVD Trigger: ATCCACCAGAGTGATGCTAAAAGAGAAGCAACCTCATCCACAGCCAATATGTGTTGAGTGCCTGCCATACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS CAA 72 bp | AGCAAGGCTAGGCGTATGGCAGGCACTCAACACATATaGGCTGTGGATGAGGTTGCTTCTCTTTTAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: SKARRMAGTQHI*AVDEVASLLAS Trigger: TGATGCTAAAAGAGAAGCAACCTCATCCACAGCCAATATGTGTTGAGTGCCTGCCATACGCCTAGCCTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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| CDS TCA 72 bp | CTCTTCTGTTATCATGATGAAGAATCAGCATGGGTTTaGGACGCACCTTATCCCAGGTGCTTGCCTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: LFCYHDEESAWV*DAPYPRCLPET Trigger: TGTTTCAGGCAAGCACCTGGGATAAGGTGCGTCTCAAACCCATGCTGATTCTTCATCATGATAACAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503167.1 |
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