Pregenerated sensors for LINC01451 (Homo sapiens)
Ensembl gene IDs: ENSG00000279141Ensembl transcript IDs: ENST00000626304.2, ENST00000628780.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGCGGTGGCTGTGCTaGTCTTATACGGGACACCCCGGCACCCGAAGGTCGAGCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LPGAWNCEWPWRWLC*SYTGHPGTRRSSRD Trigger: GTCCCTGCTCGACCTTCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 90 bp | CTGGGGTCCCAGATGCTGCCCGGAGCCTGGAACTGCGAGTGGCCGTaGCGGTGGCTGTGCTGCTCTTATACGGGACACCCCGGCACCCGA | + |
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Preference number: 5 (lower is better) Translates to: LGSQMLPGAWNCEWP*RWLCCSYTGHPGTR Trigger: TCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 90 bp | ATGCTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGCGGTGGCTGTaGTGCTCTTATACGGGACACCCCGGCACCCGAAGGTCGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: MLPGAWNCEWPWRWL*CSYTGHPGTRRSSR Trigger: CCTGCTCGACCTTCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 90 bp | TCCCAGATGCTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGCGGTaGCTGTGCTGCTCTTATACGGGACACCCCGGCACCCGAAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: SQMLPGAWNCEWPWR*LCCSYTGHPGTRRS Trigger: CGACCTTCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 90 bp | CAGGAACTGGGGTCCCAGATGCTGCCCGGAGCCTGGAACTGCGAGTaGCCGTGGCGGTGGCTGTGCTGCTCTTATACGGGACACCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QELGSQMLPGAWNCE*PWRWLCCSYTGHPG Trigger: GCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 90 bp | GGATGGCAGTGGGGAGCCTCTCACAACAGGAACTGGGGTCCCAGATaGTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGCGGTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GWQWGASHNRNWGPR*CPEPGTASGRGGGC Trigger: ACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGAGAGGCTCCCCACTGCCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 90 bp | TTGCAGGGGGTGGGATGGCAGTGGGGAGCCTCTCACAACAGGAACTaGGGTCCCAGATGCTGCCCGGAGCCTGGAACTGCGAGTGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: LQGVGWQWGASHNRN*GPRCCPEPGTASGR Trigger: ACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGAGAGGCTCCCCACTGCCATCCCACCCCCTGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 90 bp | TCACAACAGGAACTGGGGTCCCAGATGCTGCCCGGAGCCTGGAACTaGGAGTGGCCGTGGCGGTGGCTGTGCTGCTCTTATACGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: SQQELGSQMLPGAWN*EWPWRWLCCSYTGH Trigger: GTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 90 bp | CCAGAAGGTCCAGTTGCTGGACCAGGCAGGTCACAGGCCGAGCTCTaGTTCCAGCTGTCCAAACACACAGTGCCTGCAGGGCGACCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PEGPVAGPGRSQAEL*FQLSKHTVPAGRPG Trigger: CCCAGGTCGCCCTGCAGGCACTGTGTGTTTGGACAGCTGGAAGCAGAGCTCGGCCTGTGACCTGCCTGGTCCAGCAACTGGACCTTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | AGCCTCTCACAACAGGAACTGGGGTCCCAGATGCTGCCCGGAGCCTaGAACTGCGAGTGGCCGTGGCGGTGGCTGTGCTGCTCTTATACG | + |
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Preference number: 5 (lower is better) Translates to: SLSQQELGSQMLPGA*NCEWPWRWLCCSYT Trigger: CGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGAGAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS TCA 90 bp | ACCCAGCCCCTGCCACAGCACCCTGGTGGCTTCAACTGCAGGAACTaGTTCTCCTGGAAGCCCGAGATCCAAGGGCTGGCTCTTCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQPLPQHPGGFNCRN*FSWKPEIQGLALPR Trigger: CCTCGGAAGAGCCAGCCCTTGGATCTCGGGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTGCTGTGGCAGGGGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626304.2 |
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| CDS TCA 90 bp | AGGAAGAGGTCTCCAGCCATCTGGGCCATTGGTGCACTTGGGGCCTaGGGTTTCTCCAGCCCGTCGGGATTGACCCCTGCTGTCCGAGTA | + |
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Preference number: 5 (lower is better) Translates to: RKRSPAIWAIGALGA*GFSSPSGLTPAVRV Trigger: TACTCGGACAGCAGGGGTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 90 bp | CCGTGTGTGATTCCATTCCCGAGAAGCCCAGCGCTGGCCAGCCCCTaGACGTGGATTTTCTCCTTTCTCTGCTGCTCCTGGGTCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PCVIPFPRSPALASP*TWIFSFLCCSWVSK Trigger: CTTGCTGACCCAGGAGCAGCAGAGAAAGGAGAAAATCCACGTGCAGGGGCTGGCCAGCGCTGGGCTTCTCGGGAATGGAATCACACACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 90 bp | ACAGAGGAGACAAAGGAAGAGGTCTCCAGCCATCTGGGCCATTGGTaGACTTGGGGCCTGAGGTTTCTCCAGCCCGTCGGGATTGACCCC | + |
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Preference number: 5 (lower is better) Translates to: TEETKEEVSSHLGHW*TWGLRFLQPVGIDP Trigger: GGGGTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTCCTTTGTCTCCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 90 bp | CCCTGGGTGCTAGGGCTTCAGCTTGTGAATCTGAGGGCCTTTGTCTaGCCAGGCACTGCCTCCAATAGAACCTTTGGTCCTGCAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PWVLGLQLVNLRAFV*PGTASNRTFGPAGR Trigger: CCGGCCTGCAGGACCAAAGGTTCTATTGGAGGCAGTGCCTGGGCAGACAAAGGCCCTCAGATTCACAAGCTGAAGCCCTAGCACCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | GTGATTCCATTCCCGAGAAGCCCAGCGCTGGCCAGCCCCTGCACGTaGATTTTCTCCTTTCTCTGCTGCTCCTGGGTCAGCAAGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: VIPFPRSPALASPCT*IFSFLCCSWVSKTS Trigger: GCTGGTCTTGCTGACCCAGGAGCAGCAGAGAAAGGAGAAAATCCACGTGCAGGGGCTGGCCAGCGCTGGGCTTCTCGGGAATGGAATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 90 bp | GAGACAAAGGAAGAGGTCTCCAGCCATCTGGGCCATTGGTGCACTTaGGGCCTGAGGTTTCTCCAGCCCGTCGGGATTGACCCCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: ETKEEVSSHLGHWCT*GLRFLQPVGIDPCC Trigger: ACAGCAGGGGTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTCCTTTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | GAGACAGAGGAGACAAAGGAAGAGGTCTCCAGCCATCTGGGCCATTaGTGCACTTGGGGCCTGAGGTTTCTCCAGCCCGTCGGGATTGAC | + |
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Preference number: 5 (lower is better) Translates to: ETEETKEEVSSHLGH*CTWGLRFLQPVGID Trigger: GTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTCCTTTGTCTCCTCTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | CTCCCCTCTGGGACTAGGGATGGTGCTGGGAGGCCAGACAGGCTTTaGGGAAGTTACCTGACCTCTCTGAGCCACGAGGTCTTCATTTAC | + |
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Preference number: 5 (lower is better) Translates to: LPSGTRDGAGRPDRL*GSYLTSLSHEVFIY Trigger: GTAAATGAAGACCTCGTGGCTCAGAGAGGTCAGGTAACTTCCCCAAAGCCTGTCTGGCCTCCCAGCACCATCCCTAGTCCCAGAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | CAGGTCAAAGAAACATTGCCCTTGCCTTTCTGGAGCCCAGAGAAGTaGGTTCTCCAGGATCCAGCCCACGGAACATTCCAGAACCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: QVKETLPLPFWSPEK*VLQDPAHGTFQNLV Trigger: CACCAGGTTCTGGAATGTTCCGTGGGCTGGATCCTGGAGAACCCACTTCTCTGGGCTCCAGAAAGGCAAGGGCAATGTTTCTTTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | GCTGCTTTGCTTTCTCAGGTCAAAGAAACATTGCCCTTGCCTTTCTaGAGCCCAGAGAAGTGGGTTCTCCAGGATCCAGCCCACGGAACA | + |
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Preference number: 5 (lower is better) Translates to: AALLSQVKETLPLPF*SPEKWVLQDPAHGT Trigger: TGTTCCGTGGGCTGGATCCTGGAGAACCCACTTCTCTGGGCTCCAGAAAGGCAAGGGCAATGTTTCTTTGACCTGAGAAAGCAAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | AATTTGTCAGCTCGGGCAGCTGTGACAAAGTTGCACAGACCCTGGTaGCTTCAACTGCAGGAACTGATTCTCCTGGAAGCCCGAGATCCA | + |
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Preference number: 5 (lower is better) Translates to: NLSARAAVTKLHRPW*LQLQELILLEARDP Trigger: TGGATCTCGGGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACTTTGTCACAGCTGCCCGAGCTGACAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 90 bp | GTGAATTTGTCAGCTCGGGCAGCTGTGACAAAGTTGCACAGACCCTaGTGGCTTCAACTGCAGGAACTGATTCTCCTGGAAGCCCGAGAT | + |
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Preference number: 5 (lower is better) Translates to: VNLSARAAVTKLHRP*WLQLQELILLEARD Trigger: ATCTCGGGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACTTTGTCACAGCTGCCCGAGCTGACAAATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS TCA 72 bp | TGTGAGGGGCTGGCCTGGCTCCCATCGTCAGGCACGTaGGGCTGCATGGGGGCTGCATGGGACTTCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: CEGLAWLPSSGT*GCMGAAWDFAP Trigger: GGGCGCGAAGTCCCATGCAGCCCCCATGCAGCCTCACGTGCCTGACGATGGGAGCCAGGCCAGCCCCTCACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | CTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGCGGTaGCTGTGCTGCTCTTATACGGGACACCCCGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LPGAWNCEWPWR*LCCSYTGHPGT Trigger: GGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | CTGAGGTCAGAGCTGACACGCGTGCGAAGGAGGCCTTaGAGGCTGCAGCTCAGCAGGTGGGGCCGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LRSELTRVRRRP*RLQLSRWGRAG Trigger: CCCAGCCCGGCCCCACCTGCTGAGCTGCAGCCTCCAAGGCCTCCTTCGCACGCGTGTCAGCTCTGACCTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 90 bp | CCCGAGATCCAAGGGCTGGCTCTTCCGAGGCCCCGCTTCCCGCTCTaGCACACCGTCTTCCTGAGGCGCCCTCACATGGCCATCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PEIQGLALPRPRFPL*HTVFLRRPHMAIPR Trigger: CCGAGGGATGGCCATGTGAGGGCGCCTCAGGAAGACGGTGTGCAAGAGCGGGAAGCGGGGCCTCGGAAGAGCCAGCCCTTGGATCTCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 72 bp | GCCTGGAACTGCGAGTGGCCGTGGCGGTGGCTGTGCTaGTCTTATACGGGACACCCCGGCACCCGAAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: AWNCEWPWRWLC*SYTGHPGTRRS Trigger: CGACCTTCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 72 bp | GGAGCCTGGAACTGCGAGTGGCCGTGGCGGTGGCTGTaGTGCTCTTATACGGGACACCCCGGCACCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GAWNCEWPWRWL*CSYTGHPGTRR Trigger: CCTTCGGGTGCCGGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | CAACAGGAACTGGGGTCCCAGATGCTGCCCGGAGCCTaGAACTGCGAGTGGCCGTGGCGGTGGCTGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QQELGSQMLPGA*NCEWPWRWLCC Trigger: GCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | TGGCCTGGCTCCCATCGTCAGGCACGTGAGGCTGCATaGGGGCTGCATGGGACTTCGCGCCCTTGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WPGSHRQAREAA*GLHGTSRPCPQ Trigger: CTGGGGACAAGGGCGCGAAGTCCCATGCAGCCCCCATGCAGCCTCACGTGCCTGACGATGGGAGCCAGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 72 bp | CAAGGGCTGGCTCTTCCGAGGCCCCGCTTCCCGCTCTaGCACACCGTCTTCCTGAGGCGCCCTCACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: QGLALPRPRFPL*HTVFLRRPHMA Trigger: GGCCATGTGAGGGCGCCTCAGGAAGACGGTGTGCAAGAGCGGGAAGCGGGGCCTCGGAAGAGCCAGCCCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 72 bp | TGGGGAGCCTCTCACAACAGGAACTGGGGTCCCAGATaGTGCCCGGAGCCTGGAACTGCGAGTGGCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WGASHNRNWGPR*CPEPGTASGRG Trigger: GCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGAGAGGCTCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 72 bp | GGTGAGGGAGCATGTGGAGCGTCAGGGCACACGGGATaGACAGCTCAGCAGCCCAGGCAGGCCTCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GEGACGASGHTG*TAQQPRQASGG Trigger: TCCACCAGAGGCCTGCCTGGGCTGCTGAGCTGTGCATCCCGTGTGCCCTGACGCTCCACATGCTCCCTCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | CAGATGCTGCCCGGAGCCTGGAACTGCGAGTGGCCGTaGCGGTGGCTGTGCTGCTCTTATACGGGACACCCC | + |
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Preference number: 6 (lower is better) Translates to: QMLPGAWNCEWP*RWLCCSYTGHP Trigger: GGGGTGTCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | GGGTCCCAGATGCTGCCCGGAGCCTGGAACTGCGAGTaGCCGTGGCGGTGGCTGTGCTGCTCTTATACGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSQMLPGAWNCE*PWRWLCCSYTG Trigger: TCCCGTATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS GCA 72 bp | GAACTGGGGTCCCAGATGCTGCCCGGAGCCTGGAACTaGGAGTGGCCGTGGCGGTGGCTGTGCTGCTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: ELGSQMLPGAWN*EWPWRWLCCSY Trigger: ATAAGAGCAGCACAGCCACCGCCACGGCCACTCGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | GTGGGATGGCAGTGGGGAGCCTCTCACAACAGGAACTaGGGTCCCAGATGCTGCCCGGAGCCTGGAACTGCG | + |
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Preference number: 6 (lower is better) Translates to: VGWQWGASHNRN*GPRCCPEPGTA Trigger: CGCAGTTCCAGGCTCCGGGCAGCATCTGGGACCCCAGTTCCTGTTGTGAGAGGCTCCCCACTGCCATCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | AGCCCGTCGGGATTGACCCCTGCTGTCCGAGTAGCCTaGGGTGTGGGCCCCCACCCTGTCCATCTCATATGT | + |
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Preference number: 6 (lower is better) Translates to: SPSGLTPAVRVA*GVGPHPVHLIC Trigger: ACATATGAGATGGACAGGGTGGGGGCCCACACCCCAGGCTACTCGGACAGCAGGGGTCAATCCCGACGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 90 bp | GGCCAGGGCCAGGTGGTTCGCAGGCTGAGCCTGGGCTCCTGGATCTaGGAGACAGAGGAGACAAAGGAAGAGGTCTCCAGCCATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GQGQVVRRLSLGSWI*ETEETKEEVSSHLG Trigger: GCCCAGATGGCTGGAGACCTCTTCCTTTGTCTCCTCTGTCTCCAAGATCCAGGAGCCCAGGCTCAGCCTGCGAACCACCTGGCCCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS TCA 72 bp | TCTCCAGCCATCTGGGCCATTGGTGCACTTGGGGCCTaGGGTTTCTCCAGCCCGTCGGGATTGACCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SPAIWAIGALGA*GFSSPSGLTPA Trigger: AGCAGGGGTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 72 bp | CCAGTTGCTGGACCAGGCAGGTCACAGGCCGAGCTCTaGTTCCAGCTGTCCAAACACACAGTGCCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PVAGPGRSQAEL*FQLSKHTVPAG Trigger: CCCTGCAGGCACTGTGTGTTTGGACAGCTGGAAGCAGAGCTCGGCCTGTGACCTGCCTGGTCCAGCAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 72 bp | TGTGACTCTGGGGAGGGACAAGGCTTAGTCAGTGCCTaGCCGGACGCCCACACCCAGCACACAGTAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CDSGEGQGLVSA*PDAHTQHTVGA Trigger: AGCACCTACTGTGTGCTGGGTGTGGGCGTCCGGGCAGGCACTGACTAAGCCTTGTCCCTCCCCAGAGTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | GCGAGCTCTGCGCCATCCGGATTGAGTGGGGGTGGGTaGGAGTTTTCCCAGAAACGGGCCTGTGAGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: ASSAPSGLSGGG*EFSQKRACESP Trigger: TGGTGACTCACAGGCCCGTTTCTGGGAAAACTCCCACCCACCCCCACTCAATCCGGATGGCGCAGAGCTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | GAAGAGGTCTCCAGCCATCTGGGCCATTGGTGCACTTaGGGCCTGAGGTTTCTCCAGCCCGTCGGGATTGAC | + |
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Preference number: 6 (lower is better) Translates to: EEVSSHLGHWCT*GLRFLQPVGID Trigger: GTCAATCCCGACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | CAGGGCCAGGTGGTTCGCAGGCTGAGCCTGGGCTCCTaGATCTTGGAGACAGAGGAGACAAAGGAAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QGQVVRRLSLGS*ILETEETKEEV Trigger: GACCTCTTCCTTTGTCTCCTCTGTCTCCAAGATCCAGGAGCCCAGGCTCAGCCTGCGAACCACCTGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 90 bp | CCAGTCTGCGGGACTCCAGCCATGGTGACGATTCCCCACCATCTCTaGGGAAGGACTGGAGTCATGGTTCAGCTCCAACTGGGGGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: PVCGTPAMVTIPHHL*GRTGVMVQLQLGEC Trigger: GCACTCCCCCAGTTGGAGCTGAACCATGACTCCAGTCCTTCCCAAGAGATGGTGGGGAATCGTCACCATGGCTGGAGTCCCGCAGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS TCA 72 bp | CTGCCACAGCACCCTGGTGGCTTCAACTGCAGGAACTaGTTCTCCTGGAAGCCCGAGATCCAAGGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPQHPGGFNCRN*FSWKPEIQGLA Trigger: AGCCAGCCCTTGGATCTCGGGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTGCTGTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626304.2 |
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| CDS GCA 72 bp | ATTCCATTCCCGAGAAGCCCAGCGCTGGCCAGCCCCTaGACGTGGATTTTCTCCTTTCTCTGCTGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IPFPRSPALASP*TWIFSFLCCSW Trigger: CCAGGAGCAGCAGAGAAAGGAGAAAATCCACGTGCAGGGGCTGGCCAGCGCTGGGCTTCTCGGGAATGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626304.2 ENST00000628780.1 |
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| CDS CCA 72 bp | GAGACAAAGGAAGAGGTCTCCAGCCATCTGGGCCATTaGTGCACTTGGGGCCTGAGGTTTCTCCAGCCCGTC | + |
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Preference number: 6 (lower is better) Translates to: ETKEEVSSHLGH*CTWGLRFLQPV Trigger: GACGGGCTGGAGAAACCTCAGGCCCCAAGTGCACCAATGGCCCAGATGGCTGGAGACCTCTTCCTTTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 72 bp | ATGGCATTTTCTTTTCTCTGGCTTACTCCTGGGCTGTaGTGGCCTTGGCAAGGCTGGGCAAGGCGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MAFSFLWLTPGL*WPWQGWARRGW Trigger: CCAGCCTCGCCTTGCCCAGCCTTGCCAAGGCCAGCACAGCCCAGGAGTAAGCCAGAGAAAAGAAAATGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS TCA 72 bp | AGTTGCACAGACCCTGGTGGCTTCAACTGCAGGAACTaGTTCTCCTGGAAGCCCGAGATCCAAGGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SCTDPGGFNCRN*FSWKPEIQGLA Trigger: AGCCAGCCCTTGGATCTCGGGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | TTACCTGTCTCCAAACACAGTAGCACACTGGGGCCCTaGGTGCTAGGGCTTCAGCTTGTGAATCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPVSKHSSTLGP*VLGLQLVNLRA Trigger: GGCCCTCAGATTCACAAGCTGAAGCCCTAGCACCCAGGGCCCCAGTGTGCTACTGTGTTTGGAGACAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | GCTCGGGCAGCTGTGACAAAGTTGCACAGACCCTGGTaGCTTCAACTGCAGGAACTGATTCTCCTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ARAAVTKLHRPW*LQLQELILLEA Trigger: GGCTTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACTTTGTCACAGCTGCCCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 72 bp | GGGACTCCAGCCATGGTGACGATTCCCCACCATCTCTaGGGAAGGACTGGAGTCATGGTTCAGCTCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: GTPAMVTIPHHL*GRTGVMVQLQL Trigger: CAGTTGGAGCTGAACCATGACTCCAGTCCTTCCCAAGAGATGGTGGGGAATCGTCACCATGGCTGGAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS GCA 72 bp | CTAGGGCTTCAGCTTGTGAATCTGAGGGCCTTTGTCTaGCCAGGCACTGCCTCCAATAGAACCTTTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGLQLVNLRAFV*PGTASNRTFGP Trigger: AGGACCAAAGGTTCTATTGGAGGCAGTGCCTGGGCAGACAAAGGCCCTCAGATTCACAAGCTGAAGCCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CCA 72 bp | TCAGCTCGGGCAGCTGTGACAAAGTTGCACAGACCCTaGTGGCTTCAACTGCAGGAACTGATTCTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SARAAVTKLHRP*WLQLQELILLE Trigger: TTCCAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACTTTGTCACAGCTGCCCGAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS TCA 72 bp | GTCTTCATTTACAGGATGTGGCTGTGTGTCTCACTGTaGCTCTGGGGAGGGACAAGGCTTAGTCAGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VFIYRMWLCVSL*LWGGTRLSQCL Trigger: CAGGCACTGACTAAGCCTTGTCCCTCCCCAGAGTCACAGTGAGACACACAGCCACATCCTGTAAATGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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| CDS CAA 90 bp | GGCTTAAGTCAGGTGAATTTGTCAGCTCGGGCAGCTGTGACAAAGTaGCACAGACCCTGGTGGCTTCAACTGCAGGAACTGATTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLSQVNLSARAAVTK*HRPWWLQLQELILL Trigger: CAGGAGAATCAGTTCCTGCAGTTGAAGCCACCAGGGTCTGTGCAACTTTGTCACAGCTGCCCGAGCTGACAAATTCACCTGACTTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628780.1 |
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