Pregenerated sensors for LINC01449 (Homo sapiens)
Ensembl gene IDs: ENSG00000224017Ensembl transcript IDs: ENST00000440213.1, ENST00000665804.1, ENST00000666072.1, ENST00000667448.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAAGCTGCTTCAGCCGAGTTTTGCAGACCTGGATGATCTTGAACTaGTTTCAACAAACGGGCGGACTCGTGGGGTTGCAGGGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TSCFSRVLQTWMILN*FQQTGGLVGLQGFL Trigger: GAGAAAGCCCTGCAACCCCACGAGTCCGCCCGTTTGTTGAAATCAGTTCAAGATCATCCAGGTCTGCAAAACTCGGCTGAAGCAGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CCA 90 bp | ATAGCAGCATCTGCTTCTAGGGAGGCCTTAGGAAGTTTCCAGTCGTaGCGGAAGTTAAGGAAGGAGCAGGTGCATCATATGGCAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: IAASASREALGSFQS*RKLRKEQVHHMAKA Trigger: TGCTTTTGCCATATGATGCACCTGCTCCTTCCTTAACTTCCGCCACGACTGGAAACTTCCTAAGGCCTCCCTAGAAGCAGATGCTGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665804.1 |
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| CDS GCA 90 bp | AGATTCTTCGACCTTGTCTCTGGATATTCTTGGTCAGAAGGCCTTTaGTCGAGTTCTCCAGATTGGCTCTCCAGATGGCCCTCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RFFDLVSGYSWSEGL*SSSPDWLSRWPSFL Trigger: GAGAAAAGAGGGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CCA 90 bp | TCACTCAGAAGAGATCATCATTCCCTTTTACTCGGGACAGTATGGTaGTTGATCCACACTGGGCCATTTCCTGTTGACTTCAACACGGGG | + |
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Preference number: 5 (lower is better) Translates to: SLRRDHHSLLLGTVW*LIHTGPFPVDFNTG Trigger: CCCCGTGTTGAAGTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACTGTCCCGAGTAAAAGGGAATGATGATCTCTTCTGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS TCA 90 bp | AGGCTTGTCAGAATTCTTCTGCTCATTAAATTCATAATCTCCTTCTaGGGGAGCGTTGAGGACGACTTCACTGGAGTGGCTCACCCACAC | + |
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Preference number: 5 (lower is better) Translates to: RLVRILLLIKFIISF*GSVEDDFTGVAHPH Trigger: GTGTGGGTGAGCCACTCCAGTGAAGTCGTCCTCAACGCTCCCTCAGAAGGAGATTATGAATTTAATGAGCAGAAGAATTCTGACAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS GCA 90 bp | TCTCCTTTCTGCCACCATGTGAAGAAGGATGTTTGCTTCACCTTTTaGCACAACTGTAAGTTTCCTCGGGCCTCCTTCACCTTTTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SPFCHHVKKDVCFTF*HNCKFPRASFTFCH Trigger: ATGGCAAAAGGTGAAGGAGGCCCGAGGAAACTTACAGTTGTGGCAAAAGGTGAAGCAAACATCCTTCTTCACATGGTGGCAGAAAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS GCA 90 bp | CTCCAGATTGGCTCTCCAGATGGCCCTCTTTTCTCTGGTAAATTATaGAACAAGCTGCTTCAGCCGAGTTTTGCAGACCTGGATGATCTT | + |
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Preference number: 5 (lower is better) Translates to: LQIGSPDGPLFSGKL*NKLLQPSFADLDDL Trigger: AAGATCATCCAGGTCTGCAAAACTCGGCTGAAGCAGCTTGTTGCATAATTTACCAGAGAAAAGAGGGCCATCTGGAGAGCCAATCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 90 bp | ACTCGGGACAGTATGGTGGTTGATCCACACTGGGCCATTTCCTGTTaGCTTCAACACGGGGCTGATGGTAAAAACAACCTTTCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TRDSMVVDPHWAISC*LQHGADGKNNLSSF Trigger: AAAAGAAGAAAGGTTGTTTTTACCATCAGCCCCGTGTTGAAGTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACTGTCCCGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS GCA 90 bp | TTTGCTCATTCTTCTCCTTTCTGCCACCATGTGAAGAAGGATGTTTaGTTCACCTTTTGCCACAACTGTAAGTTTCCTCGGGCCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FAHSSPFCHHVKKDV*FTFCHNCKFPRASF Trigger: GAAGGAGGCCCGAGGAAACTTACAGTTGTGGCAAAAGGTGAAGCAAACATCCTTCTTCACATGGTGGCAGAAAGGAGAAGAATGAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CCA 90 bp | AAGTCACTCAGAAGAGATCATCATTCCCTTTTACTCGGGACAGTATaGTGGTTGATCCACACTGGGCCATTTCCTGTTGACTTCAACACG | + |
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Preference number: 5 (lower is better) Translates to: KSLRRDHHSLLLGTV*WLIHTGPFPVDFNT Trigger: CGTGTTGAAGTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACTGTCCCGAGTAAAAGGGAATGATGATCTCTTCTGAGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS CCA 90 bp | GTTCCTAAGCGGCCTTTAAAAGTTCAGATTCTTCGACCTTGTCTCTaGATATTCTTGGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: VPKRPLKVQILRPCL*IFLVRRPLLEFSRL Trigger: CAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCTGAACTTTTAAAGGCCGCTTAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CCA 90 bp | ATATCCCAATGGGGATGTCCCCATTATCCAAGGACAATATCCCAATaGCCTTTGTGCATACATGTTGGAGCTCTAGCATGTAGCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: ISQWGCPHYPRTISQ*PLCIHVGALACSIS Trigger: GGAAATGCTACATGCTAGAGCTCCAACATGTATGCACAAAGGCCATTGGGATATTGTCCTTGGATAATGGGGACATCCCCATTGGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS TCA 90 bp | TGGGATGATACCAGTTTAGGACAGTCTGTGTCAGAGCATTTGAGCTaGATCTCCAAACCCAAACATGCTTTGGAAGAAGCATTTAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: WDDTSLGQSVSEHLS*ISKPKHALEEAFRD Trigger: GTCTCTAAATGCTTCTTCCAAAGCATGTTTGGGTTTGGAGATTCAGCTCAAATGCTCTGACACAGACTGTCCTAAACTGGTATCATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 90 bp | AGCACGAAGTATTACTTGTTTTTCAATTTCTGTCACAGGCTGGGATaGTACCAGTTTAGGACAGTCTGTGTCAGAGCATTTGAGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: STKYYLFFNFCHRLG*YQFRTVCVRAFELN Trigger: ATTCAGCTCAAATGCTCTGACACAGACTGTCCTAAACTGGTATCATCCCAGCCTGTGACAGAAATTGAAAAACAAGTAATACTTCGTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 90 bp | CAGGCTATTAAAATAGACACGGGCACTGAAGTGAATGTGCTGAAATaGAACAAAGGGAATTCTCCAAAATTCAAACATGGAACTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: QAIKIDTGTEVNVLK*NKGNSPKFKHGTLG Trigger: ACCCAGAGTTCCATGTTTGAATTTTGGAGAATTCCCTTTGTTTCATTTCAGCACATTCACTTCAGTGCCCGTGTCTATTTTAATAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS TCA 90 bp | TGGCACTCTACTTTCATGTCCCATCTCCTAGTACTAGTGTGTCACTaGATGCACAGTAAGAAATGCTTGTATATGCACATAGAAGATTAC | + |
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Preference number: 5 (lower is better) Translates to: WHSTFMSHLLVLVCH*MHSKKCLYMHIEDY Trigger: GTAATCTTCTATGTGCATATACAAGCATTTCTTACTGTGCATTCAGTGACACACTAGTACTAGGAGATGGGACATGAAAGTAGAGTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS TCA 90 bp | AAATTCAAACATGGAACTCTGGGTGATAAACTCTCGACCTGGTCCTaGTTAACTCTTAAGTCACTCAGAAGAGATCATCATTCCCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: KFKHGTLGDKLSTWS*LTLKSLRRDHHSLL Trigger: TAAAAGGGAATGATGATCTCTTCTGAGTGACTTAAGAGTTAATCAGGACCAGGTCGAGAGTTTATCACCCAGAGTTCCATGTTTGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS GCA 72 bp | GACCTTGTCTCTGGATATTCTTGGTCAGAAGGCCTTTaGTCGAGTTCTCCAGATTGGCTCTCCAGATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DLVSGYSWSEGL*SSSPDWLSRWP Trigger: GGGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 72 bp | CGACCTTGTCTCTGGATATTCTTGGTCAGAAGGCCTTaGCTCGAGTTCTCCAGATTGGCTCTCCAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RPCLWIFLVRRP*LEFSRLALQMA Trigger: GGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | TTCAGCCGAGTTTTGCAGACCTGGATGATCTTGAACTaGTTTCAACAAACGGGCGGACTCGTGGGGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: FSRVLQTWMILN*FQQTGGLVGLQ Trigger: CTGCAACCCCACGAGTCCGCCCGTTTGTTGAAATCAGTTCAAGATCATCCAGGTCTGCAAAACTCGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | CTCAGAAGAGATCATCATTCCCTTTTACTCGGGACAGTATGGTGGTaGATCCACACTGGGCCATTTCCTGTTGACTTCAACACGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRRDHHSLLLGTVWW*IHTGPFPVDFNTGL Trigger: CAGCCCCGTGTTGAAGTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACTGTCCCGAGTAAAAGGGAATGATGATCTCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS GCA 72 bp | TGCCACCATGTGAAGAAGGATGTTTGCTTCACCTTTTaGCACAACTGTAAGTTTCCTCGGGCCTCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: CHHVKKDVCFTF*HNCKFPRASFT Trigger: GGTGAAGGAGGCCCGAGGAAACTTACAGTTGTGGCAAAAGGTGAAGCAAACATCCTTCTTCACATGGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | CAGATTCTTCGACCTTGTCTCTGGATATTCTTGGTCAGAAGGCCTTaGCTCGAGTTCTCCAGATTGGCTCTCCAGATGGCCCTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QILRPCLWIFLVRRP*LEFSRLALQMALFS Trigger: AGAAAAGAGGGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | AATGGCTTCTTCCAGGCGGTTGAAAAACTTCGCCGGTaGAAAGCCACTCATATTTTGGCGGAGGATGAACCT | + |
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Preference number: 6 (lower is better) Translates to: NGFFQAVEKLRR*KATHILAEDEP Trigger: AGGTTCATCCTCCGCCAAAATATGAGTGGCTTTTCACCGGCGAAGTTTTTCAACCGCCTGGAAGAAGCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000666072.1 ENST00000667448.1 |
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| CDS CAA 72 bp | TTCTTGGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATaGGCTCTCCAGATGGCCCTCTTTTCTCTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: FLVRRPLLEFSR*ALQMALFSLVN Trigger: ATTTACCAGAGAAAAGAGGGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | CGGCCTTTAAAAGTTCAGATTCTTCGACCTTGTCTCTGGATATTCTaGGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATTGGCTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RPLKVQILRPCLWIF*VRRPLLEFSRLALQ Trigger: CTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCTGAACTTTTAAAGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | GGGTTGCAGGGCTTTCTCCTAGTCCTTTCATCCAAGGAAGAATACTaGAATTGTAGTTCCCGTAATTCCTACATGTTGTGGAAGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GLQGFLLVLSSKEEY*NCSSRNSYMLWKGP Trigger: GGGTCCCTTCCACAACATGTAGGAATTACGGGAACTACAATTCAAGTATTCTTCCTTGGATGAAAGGACTAGGAGAAAGCCCTGCAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | CTCTGGATATTCTTGGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATaGGCTCTCCAGATGGCCCTCTTTTCTCTGGTAAATTATGCAACA | + |
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Preference number: 6 (lower is better) Translates to: LWIFLVRRPLLEFSR*ALQMALFSLVNYAT Trigger: TGTTGCATAATTTACCAGAGAAAAGAGGGCCATCTGGAGAGCCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | AGTATGGTGGTTGATCCACACTGGGCCATTTCCTGTTaGCTTCAACACGGGGCTGATGGTAAAAACAACCTT | + |
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Preference number: 6 (lower is better) Translates to: SMVVDPHWAISC*LQHGADGKNNL Trigger: AAGGTTGTTTTTACCATCAGCCCCGTGTTGAAGTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS CCA 72 bp | AGAAGAGATCATCATTCCCTTTTACTCGGGACAGTATaGTGGTTGATCCACACTGGGCCATTTCCTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RRDHHSLLLGTV*WLIHTGPFPVD Trigger: GTCAACAGGAAATGGCCCAGTGTGGATCAACCACCATACTGTCCCGAGTAAAAGGGAATGATGATCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665804.1 ENST00000666072.1 ENST00000667448.1 |
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| CDS CCA 72 bp | TGGGGATGTCCCCATTATCCAAGGACAATATCCCAATaGCCTTTGTGCATACATGTTGGAGCTCTAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: WGCPHYPRTISQ*PLCIHVGALAC Trigger: ACATGCTAGAGCTCCAACATGTATGCACAAAGGCCATTGGGATATTGTCCTTGGATAATGGGGACATCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS GCA 72 bp | TCTTCTCCTTTCTGCCACCATGTGAAGAAGGATGTTTaGTTCACCTTTTGCCACAACTGTAAGTTTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSPFCHHVKKDV*FTFCHNCKFPR Trigger: CCGAGGAAACTTACAGTTGTGGCAAAAGGTGAAGCAAACATCCTTCTTCACATGGTGGCAGAAAGGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS GCA 72 bp | ATGGCCCTCTTTTCTCTGGTAAATTATGCAACAAGCTaGTTCAGCCGAGTTTTGCAGACCTGGATGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: MALFSLVNYATS*FSRVLQTWMIL Trigger: CAAGATCATCCAGGTCTGCAAAACTCGGCTGAAGCAGCTTGTTGCATAATTTACCAGAGAAAAGAGGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CCA 72 bp | AAGTTCAGATTCTTCGACCTTGTCTCTGGATATTCTTaGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: KFRFFDLVSGYS*SEGLCSSSPDW Trigger: CCAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCTGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | ACCAGTTTAGGACAGTCTGTGTCAGAGCATTTGAGCTaGATCTCCAAACCCAAACATGCTTTGGAAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: TSLGQSVSEHLS*ISKPKHALEEA Trigger: TGCTTCTTCCAAAGCATGTTTGGGTTTGGAGATTCAGCTCAAATGCTCTGACACAGACTGTCCTAAACTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | AGAATTCTTCTGCTCATTAAATTCATAATCTCCTTCTaGGGGAGCGTTGAGGACGACTTCACTGGAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RILLLIKFIISF*GSVEDDFTGVA Trigger: AGCCACTCCAGTGAAGTCGTCCTCAACGCTCCCTCAGAAGGAGATTATGAATTTAATGAGCAGAAGAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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| CDS CAA 72 bp | AAAGTTCAGATTCTTCGACCTTGTCTCTGGATATTCTaGGTCAGAAGGCCTTTGCTCGAGTTCTCCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: KVQILRPCLWIF*VRRPLLEFSRL Trigger: CAATCTGGAGAACTCGAGCAAAGGCCTTCTGACCAAGAATATCCAGAGACAAGGTCGAAGAATCTGAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS CAA 90 bp | GTTGCTTTTAAGATAGTCCCTGGCACTACTAGGAGGTCAACCATTTaGTTCTTTTCAGTAGCCAGATGCCAGCAAGTTACTGTCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VAFKIVPGTTRRSTI*FFSVARCQQVTVSS Trigger: TGAAGAGACAGTAACTTGCTGGCATCTGGCTACTGAAAAGAACAAAATGGTTGACCTCCTAGTAGTGCCAGGGACTATCTTAAAAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440213.1 |
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| CDS CAA 72 bp | GGCTTTCTCCTAGTCCTTTCATCCAAGGAAGAATACTaGAATTGTAGTTCCCGTAATTCCTACATGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GFLLVLSSKEEY*NCSSRNSYMLW Trigger: CCACAACATGTAGGAATTACGGGAACTACAATTCAAGTATTCTTCCTTGGATGAAAGGACTAGGAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | TATTACTTGTTTTTCAATTTCTGTCACAGGCTGGGATaGTACCAGTTTAGGACAGTCTGTGTCAGAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: YYLFFNFCHRLG*YQFRTVCVRAF Trigger: AAATGCTCTGACACAGACTGTCCTAAACTGGTATCATCCCAGCCTGTGACAGAAATTGAAAAACAAGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000440213.1 ENST00000665804.1 ENST00000666072.1 |
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| CDS TCA 72 bp | ACTTTCATGTCCCATCTCCTAGTACTAGTGTGTCACTaGATGCACAGTAAGAAATGCTTGTATATGCACATA | + |
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Preference number: 6 (lower is better) Translates to: TFMSHLLVLVCH*MHSKKCLYMHI Trigger: TATGTGCATATACAAGCATTTCTTACTGTGCATTCAGTGACACACTAGTACTAGGAGATGGGACATGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667448.1 |
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