Pregenerated sensors for LINC01448 (Homo sapiens)

Ensembl gene IDs: ENSG00000238284

Ensembl transcript IDs: ENST00000455947.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACATTTTAGAATGGCTAAAATTAAAGACTGACCATATCGAGCATTaGTGTGAATGTGGAGGAATAGACTCCCATACATTGCTGGTGGGA	+
Preference number: 5 (lower is better) Translates to: NILEWLKLKTDHIEH*CECGGIDSHTLLVG Trigger: TCCCACCAGCAATGTATGGGAGTCTATTCCTCCACATTCACACCAATGCTCGATATGGTCAGTCTTTAATTTTAGCCATTCTAAAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS TCA 90 bp	GATACATGCCACAACAAGGGTGAATCTCAAAATAATTATGCCAAGTaGAGGAAACTAAACTCCAAAGAGAGTCCACACTATATGATTCTA	+
Preference number: 5 (lower is better) Translates to: DTCHNKGESQNNYAK*RKLNSKESPHYMIL Trigger: TAGAATCATATAGTGTGGACTCTCTTTGGAGTTTAGTTTCCTTCACTTGGCATAATTATTTTGAGATTCACCCTTGTTGTGGCATGTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS CAA 72 bp	ATTAGCAGTTCCAAGAACAAGGAAGGATGGGAAGGATaGTGCAGAAACTTTGGGAGCACGTGGACATGTTCA	+
Preference number: 6 (lower is better) Translates to: ISSSKNKEGWEG*CRNFGSTWTCS Trigger: TGAACATGTCCACGTGCTCCCAAAGTTTCTGCACAATCCTTCCCATCCTTCCTTGTTCTTGGAACTGCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS CAA 90 bp	GCAGTTCCAAGAACAAGGAAGGATGGGAAGGATTGTGCAGAAACTTaGGGAGCACGTGGACATGTTCATTATCTTGATTGTAGTGATAGT	+
Preference number: 6 (lower is better) Translates to: AVPRTRKDGKDCAET*GARGHVHYLDCSDS Trigger: ACTATCACTACAATCAAGATAATGAACATGTCCACGTGCTCCCAAAGTTTCTGCACAATCCTTCCCATCCTTCCTTGTTCTTGGAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS CAA 72 bp	AGAACAAGGAAGGATGGGAAGGATTGTGCAGAAACTTaGGGAGCACGTGGACATGTTCATTATCTTGATTGT	+
Preference number: 6 (lower is better) Translates to: RTRKDGKDCAET*GARGHVHYLDC Trigger: ACAATCAAGATAATGAACATGTCCACGTGCTCCCAAAGTTTCTGCACAATCCTTCCCATCCTTCCTTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS TCA 72 bp	TTAAAGTGGATTTCACTGCATTGTGTTTCAGATGGATaGCTTCACCATAGACATTATGTCACTTTTCTGAGG	+
Preference number: 6 (lower is better) Translates to: LKWISLHCVSDG*LHHRHYVTFLR Trigger: CCTCAGAAAAGTGACATAATGTCTATGGTGAAGTCATCCATCTGAAACACAATGCAGTGAAATCCACTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS TCA 72 bp	CACAACAAGGGTGAATCTCAAAATAATTATGCCAAGTaGAGGAAACTAAACTCCAAAGAGAGTCCACACTAT	+
Preference number: 6 (lower is better) Translates to: HNKGESQNNYAK*RKLNSKESPHY Trigger: ATAGTGTGGACTCTCTTTGGAGTTTAGTTTCCTTCACTTGGCATAATTATTTTGAGATTCACCCTTGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455947.2
CDS CAA 90 bp	AGGATTGTGCAGAAACTTTGGGAGCACGTGGACATGTTCATTATCTaGATTGTAGTGATAGTTTTACAGGTATATACTTATGTCAACATT	+
Preference number: 6 (lower is better) Translates to: RIVQKLWEHVDMFII*IVVIVLQVYTYVNI Trigger: AATGTTGACATAAGTATATACCTGTAAAACTATCACTACAATCAAGATAATGAACATGTCCACGTGCTCCCAAAGTTTCTGCACAATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455947.2

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