Pregenerated sensors for LINC01447 (Homo sapiens)
Ensembl gene IDs: ENSG00000236078Ensembl transcript IDs: ENST00000429010.1, ENST00000664691.1, ENST00000668284.1, ENST00000671379.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCACCGGGGCTGCAGGTGGAGCTGCCTGCCAGTCCCGGTGCCTTaGGCCCGCACTCTTCAGCCCTTAGGCGGTCGATGGGACTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: PHRGCRWSCLPVPVP*ARTLQPLGGRWDWA Trigger: CGCCCAGTCCCATCGACCGCCTAAGGGCTGAAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 90 bp | GCCCGCACTCTTCAGCCCTTAGGCGGTCGATGGGACTGGGCGCCATaGAGCAGGGGGTGGCGCTCGTCGGGGAGGCTCCGGCTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: ARTLQPLGGRWDWAP*SRGWRSSGRLRLHR Trigger: CCTGTGCAGCCGGAGCCTCCCCGACGAGCGCCACCCCCTGCTCCATGGCGCCCAGTCCCATCGACCGCCTAAGGGCTGAAGAGTGCGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 90 bp | CTCCAAGGCCCCACCAGACTCAGGAGTCCAGCTGGCTTCACCCAGTaGATCCCGCACCGGGGCTGCAGGTGGAGCTGCCTGCCAGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LQGPTRLRSPAGFTQ*IPHRGCRWSCLPVP Trigger: CGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCCAGCTGGACTCCTGAGTCTGGTGGGGCCTTGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 90 bp | GCACAGGAATCCACGGAGGAGGGGGAAGGCTCAGGCATGGTGGGCTaGAGTCCCGAGGCCTGCCCCGCGGGAAGGCAGCTAAGGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: AQESTEEGEGSGMVG*SPEACPAGRQLRPD Trigger: ATCTGGCCTTAGCTGCCTTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGATTCCTGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 90 bp | GAGCACATCAACAGATGCCGACATGCTGGCCATCGACTGGCAGAATaGGGCGGAGTTTGGCTGGAGCAGTCAGAGGAGAGCTGGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: EHINRCRHAGHRLAE*GGVWLEQSEESWGG Trigger: GCCGCCCCAGCTCTCCTCTGACTGCTCCAGCCAAACTCCGCCTCATTCTGCCAGTCGATGGCCAGCATGTCGGCATCTGTTGATGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 90 bp | CTTCTTAGCCACTTCCTGACCTCATCAGGCAGACACACAAGCCGCTaGATGTGGAGAGGAGCAGATCAGCAGAAGAAGACACAGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: LLSHFLTSSGRHTSR*MWRGADQQKKTQAA Trigger: GGCCGCCTGTGTCTTCTTCTGCTGATCTGCTCCTCTCCACATCCAGCGGCTTGTGTGTCTGCCTGATGAGGTCAGGAAGTGGCTAAGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429010.1 ENST00000671379.1 |
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| CDS GCA 90 bp | AAAGTGAATGAGAGGGGTGGCCGTGGCAGTCCTATGGAGCACATGTaGTTCACTCTCTTTCAGCGTCACTCAGGGGACAAGGCCGTACTC | + |
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Preference number: 5 (lower is better) Translates to: KVNERGGRGSPMEHM*FTLFQRHSGDKAVL Trigger: GAGTACGGCCTTGTCCCCTGAGTGACGCTGAAAGAGAGTGAAGCACATGTGCTCCATAGGACTGCCACGGCCACCCCTCTCATTCACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS GCA 90 bp | CGAAAGAACAAACTTTCCACAGTGTGGAAGGAGACCCCAGTGGGTTaGCACTGCTGGCTCCGGCAGCCTGCTTTTATTCTCTTATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RKNKLSTVWKETPVG*HCWLRQPAFILLSG Trigger: GCCAGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 90 bp | AGCAAGATTTATTGCAAAGAGCGAAAGAACAAACTTTCCACAGTGTaGAAGGAGACCCCAGTGGGTTGCCACTGCTGGCTCCGGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SKIYCKERKNKLSTV*KETPVGCHCWLRQP Trigger: AGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 90 bp | GTTCAAGCTGCGCTGGATCTTTTCAAACAGCCAAGAGCATGTTCGTaGCAGCCCTGTTTTCTTCCACGGCCTTTCACTCCCTGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VQAALDLFKQPRACS*QPCFLPRPFTPCFL Trigger: AAGGAAACAGGGAGTGAAAGGCCGTGGAAGAAAACAGGGCTGCCACGAACATGCTCTTGGCTGTTTGAAAAGATCCAGCGCAGCTTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 90 bp | CCTGGTGTTTTGGTAACAAGTTCATTCAGTCATGCAGCTCTTGACTaGAAGCCTCATTTCCTTGCTGCATGGGTCTCTCCGCAGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PGVLVTSSFSHAALD*KPHFLAAWVSPQSC Trigger: GCAGCTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGAATGAACTTGTTACCAAAACACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 90 bp | AACCCCTGGTGTTTTGGTAACAAGTTCATTCAGTCATGCAGCTCTTaGCTGGAAGCCTCATTTCCTTGCTGCATGGGTCTCTCCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: NPWCFGNKFIQSCSS*LEASFPCCMGLSAE Trigger: CTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGAATGAACTTGTTACCAAAACACCAGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 90 bp | CCCAAAGGACTCATGAGCATTCCAAACACAAATGTAAACACTCGCTaGTCTACTGCATGCTGGAAAACGCGGCTACTCTTAGCAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PKGLMSIPNTNVNTR*STACWKTRLLLAGP Trigger: AGGCCCTGCTAAGAGTAGCCGCGTTTTCCAGCATGCAGTAGATCAGCGAGTGTTTACATTTGTGTTTGGAATGCTCATGAGTCCTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS TCA 90 bp | TTCCTTGGCAATACTTGTCATCTCAGTGATGAGCTTTCCATGCGGTaGGCAGAAGGACCTGGACCAAACCCCTGGTGTTTTGGTAACAAG | + |
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Preference number: 5 (lower is better) Translates to: FLGNTCHLSDELSMR*AEGPGPNPWCFGNK Trigger: CTTGTTACCAAAACACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACCGCATGGAAAGCTCATCACTGAGATGACAAGTATTGCCAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 90 bp | AAGATGGATTTGAGACTGAGCTCCCATCTCCTCGGTTGCAGCACCTaGTTAAATCCTTCCTTGGCAATACTTGTCATCTCAGTGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: KMDLRLSSHLLGCST*LNPSLAILVISVMS Trigger: GCTCATCACTGAGATGACAAGTATTGCCAAGGAAGGATTTAATCAGGTGCTGCAACCGAGGAGATGGGAGCTCAGTCTCAAATCCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 90 bp | TCACATTCACAGAGGCTTGGGCAGCAATACGTTCATAGAAAGCTCTaGTTAATGACTCAGTCTTTGCCCCAAAGGACTCATGAGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: SHSQRLGQQYVHRKL*LMTQSLPQRTHEHS Trigger: GGAATGCTCATGAGTCCTTTGGGGCAAAGACTGAGTCATTAATCAGAGCTTTCTATGAACGTATTGCTGCCCAAGCCTCTGTGAATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS TCA 90 bp | GGCACAATCAGAGGTTATAACCTCAGAGAGGATGGACTGGGAATATaGGTACCAGAGAGGGGAAATTTTGTCTCTTACCTGATATCGATT | + |
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Preference number: 5 (lower is better) Translates to: GTIRGYNLREDGLGI*VPERGNFVSYLISI Trigger: AATCGATATCAGGTAAGAGACAAAATTTCCCCTCTCTGGTACTCATATTCCCAGTCCATCCTCTCTGAGGTTATAACCTCTGATTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664691.1 |
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| CDS TCA 90 bp | TGTACATCATGCACACTCATTTGCATATGCTCAGACATTCTAGAATaGTGCCTGGCACAATCAGAGGTTATAACCTCAGAGAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: CTSCTLICICSDILE*CLAQSEVITSERMD Trigger: GTCCATCCTCTCTGAGGTTATAACCTCTGATTGTGCCAGGCATCATTCTAGAATGTCTGAGCATATGCAAATGAGTGTGCATGATGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664691.1 |
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| CDS GCA 90 bp | ATTTATTATCACTATCACGTATTATGGGCTGTACATAATCGTGTGTaGTATACTTTTATGCAACTGGCCATGCAGGTTTGTTCACATCAG | + |
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Preference number: 5 (lower is better) Translates to: IYYHYHVLWAVHNRV*YTFMQLAMQVCSHQ Trigger: CTGATGTGAACAAACCTGCATGGCCAGTTGCATAAAAGTATAGCACACACGATTATGTACAGCCCATAATACGTGATAGTGATAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 72 bp | GGCTTCACCCAGTGGATCCCGCACCGGGGCTGCAGGTaGAGCTGCCTGCCAGTCCCGGTGCCTTGCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GFTQWIPHRGCR*SCLPVPVPCAR Trigger: GCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | TCCACGGAGGAGGGGGAAGGCTCAGGCATGGTGGGCTaGAGTCCCGAGGCCTGCCCCGCGGGAAGGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: STEEGEGSGMVG*SPEACPAGRQL Trigger: TAGCTGCCTTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | AGTGGATCCCGCACCGGGGCTGCAGGTGGAGCTGCCTaGCAGTCCCGGTGCCTTGCGCCCGCACTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGSRTGAAGGAA*QSRCLAPALFS Trigger: GCTGAAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | ACCCAGTGGATCCCGCACCGGGGCTGCAGGTGGAGCTaGCTGCCAGTCCCGGTGCCTTGCGCCCGCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: TQWIPHRGCRWS*LPVPVPCARTL Trigger: AAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | AGGAATCCACGGAGGAGGGGGAAGGCTCAGGCATGGTaGGCTGCAGTCCCGAGGCCTGCCCCGCGGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RNPRRRGKAQAW*AAVPRPAPREG Trigger: GCCTTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGATTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | GGCTGCAGGTGGAGCTGCCTGCCAGTCCCGGTGCCTTaGGCCCGCACTCTTCAGCCCTTAGGCGGTCGATGG | + |
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Preference number: 6 (lower is better) Translates to: GCRWSCLPVPVP*ARTLQPLGGRW Trigger: CCATCGACCGCCTAAGGGCTGAAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | CACAGGAATCCACGGAGGAGGGGGAAGGCTCAGGCATaGTGGGCTGCAGTCCCGAGGCCTGCCCCGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HRNPRRRGKAQA*WAAVPRPAPRE Trigger: TTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGATTCCTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | CCCACCAGACTCAGGAGTCCAGCTGGCTTCACCCAGTaGATCCCGCACCGGGGCTGCAGGTGGAGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PTRLRSPAGFTQ*IPHRGCRWSCL Trigger: CAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCCAGCTGGACTCCTGAGTCTGGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | AGTTCTCCAAGGCCCCACCAGACTCAGGAGTCCAGCTaGCTTCACCCAGTGGATCCCGCACCGGGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSPRPHQTQESS*LHPVDPAPGLQ Trigger: CTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCCAGCTGGACTCCTGAGTCTGGTGGGGCCTTGGAGAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | GGCTGGAGCAGTCAGAGGAGAGCTGGGGCGGCCAAGTaGCCTGACTGCAGGCAAAAACCATCTCCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GWSSQRRAGAAK*PDCRQKPSPFW Trigger: CCAGAAGGGAGATGGTTTTTGCCTGCAGTCAGGCCACTTGGCCGCCCCAGCTCTCCTCTGACTGCTCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 90 bp | ACCTTCGCGGTGAGTGTTACAGCTCTTAAGGCGGCACGTCTGGAGTaGTTCGTTCTTCCCGGTGGGCTCGTGGGCTCGCTGGCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TFAVSVTALKAARLE*FVLPGGLVGSLASG Trigger: TCCTGAAGCCAGCGAGCCCACGAGCCCACCGGGAAGAACGAACAACTCCAGACGTGCCGCCTTAAGAGCTGTAACACTCACCGCGAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS GCA 72 bp | GAGAGGGGTGGCCGTGGCAGTCCTATGGAGCACATGTaGTTCACTCTCTTTCAGCGTCACTCAGGGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: ERGGRGSPMEHM*FTLFQRHSGDK Trigger: CTTGTCCCCTGAGTGACGCTGAAAGAGAGTGAAGCACATGTGCTCCATAGGACTGCCACGGCCACCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 72 bp | AGCACATCAACAGATGCCGACATGCTGGCCATCGACTaGCAGAATGAGGCGGAGTTTGGCTGGAGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: STSTDADMLAID*QNEAEFGWSSQ Trigger: CTGACTGCTCCAGCCAAACTCCGCCTCATTCTGCCAGTCGATGGCCAGCATGTCGGCATCTGTTGATGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | ACAGTGTGGAAGGAGACCCCAGTGGGTTGCCACTGCTaGCTCCGGCAGCCTGCTTTTATTCTCTTATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TVWKETPVGCHC*LRQPAFILLSG Trigger: GCCAGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | TCCACAGTGTGGAAGGAGACCCCAGTGGGTTGCCACTaGTGGCTCCGGCAGCCTGCTTTTATTCTCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: STVWKETPVGCH*WLRQPAFILLS Trigger: AGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | AAACTTTCCACAGTGTGGAAGGAGACCCCAGTGGGTTaGCACTGCTGGCTCCGGCAGCCTGCTTTTATTCTC | + |
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Preference number: 6 (lower is better) Translates to: KLSTVWKETPVG*HCWLRQPAFIL Trigger: GAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | AGAACAAACTTTCCACAGTGTGGAAGGAGACCCCAGTaGGTTGCCACTGCTGGCTCCGGCAGCCTGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RTNFPQCGRRPQ*VATAGSGSLLL Trigger: TAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 72 bp | AGCAGATCAGCAGAAGAAGACACAGGCGGCCGGATATaGAGAGAACGTCGAGGGAGCATGCCAGCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSAEEDTGGRI*RERRGSMPAEE Trigger: CTCTTCTGCTGGCATGCTCCCTCGACGTTCTCTCAATATCCGGCCGCCTGTGTCTTCTTCTGCTGATCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429010.1 ENST00000671379.1 |
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| CDS CAA 72 bp | CAAACTTTCCACAGTGTGGAAGGAGACCCCAGTGGGTaGCCACTGCTGGCTCCGGCAGCCTGCTTTTATTCT | + |
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Preference number: 6 (lower is better) Translates to: QTFHSVEGDPSG*PLLAPAACFYS Trigger: AGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | CACTTCCTGACCTCATCAGGCAGACACACAAGCCGCTaGATGTGGAGAGGAGCAGATCAGCAGAAGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: HFLTSSGRHTSR*MWRGADQQKKT Trigger: TGTCTTCTTCTGCTGATCTGCTCCTCTCCACATCCAGCGGCTTGTGTGTCTGCCTGATGAGGTCAGGAAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429010.1 ENST00000671379.1 |
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| CDS CCA 72 bp | GCGCTGGATCTTTTCAAACAGCCAAGAGCATGTTCGTaGCAGCCCTGTTTTCTTCCACGGCCTTTCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: ALDLFKQPRACS*QPCFLPRPFTP Trigger: GGGAGTGAAAGGCCGTGGAAGAAAACAGGGCTGCCACGAACATGCTCTTGGCTGTTTGAAAAGATCCAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CAA 72 bp | TCAGTCATGCAGCTCTTGACTGGAAGCCTCATTTCCTaGCTGCATGGGTCTCTCCGCAGAGCTGCTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: SVMQLLTGSLIS*LHGSLRRAAHG Trigger: ACCATGAGCAGCTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 90 bp | GCGAAAGAACAAACTTTCCACAGTGTGGAAGGAGACCCCAGTGGGTaGCCACTGCTGGCTCCGGCAGCCTGCTTTTATTCTCTTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: AKEQTFHSVEGDPSG*PLLAPAACFYSLIW Trigger: CCAGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | CTAAGGCCAGATCACCGCATTCAGACAATGAGATGCTaGCCCCTCATTCATCATGATTGCTTCCGTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LRPDHRIQTMRC*PLIHHDCFRAP Trigger: AGGGGCACGGAAGCAATCATGATGAATGAGGGGGCAGCATCTCATTGTCTGAATGCGGTGATCTGGCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | CAGCTAAGGCCAGATCACCGCATTCAGACAATGAGATaGTGCCCCCTCATTCATCATGATTGCTTCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QLRPDHRIQTMR*CPLIHHDCFRA Trigger: GGCACGGAAGCAATCATGATGAATGAGGGGGCAGCATCTCATTGTCTGAATGCGGTGATCTGGCCTTAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 90 bp | CAAGTTCATTCAGTCATGCAGCTCTTGACTGGAAGCCTCATTTCCTaGCTGCATGGGTCTCTCCGCAGAGCTGCTCATGGTGTGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: QVHSVMQLLTGSLIS*LHGSLRRAAHGVAC Trigger: ACATGCCACACCATGAGCAGCTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGAATGAACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | TTGGCAATACTTGTCATCTCAGTGATGAGCTTTCCATaGGGTGAGCAGAAGGACCTGGACCAAACCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LAILVISVMSFP*GEQKDLDQTPG Trigger: ACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACCGCATGGAAAGCTCATCACTGAGATGACAAGTATTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | TATTGCAAAGAGCGAAAGAACAAACTTTCCACAGTGTaGAAGGAGACCCCAGTGGGTTGCCACTGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: YCKERKNKLSTV*KETPVGCHCWL Trigger: GAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCGCTCTTTGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | TTGTTCCTTCTGATGTTCGGAGTTTCTTCCTTCTGGTaGGTTAGTGGTCTCGCTGGCTCAGGAGTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LFLLMFGVSSFW*VSGLAGSGVKL Trigger: CAGCTTCACTCCTGAGCCAGCGAGACCACTAACCCACCAGAAGGAAGAAACTCCGAACATCAGAAGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS TCA 72 bp | GTTAAACTTAGTCTCAGCGCTGAATGGAAAAGTGAATaGGAGGGGTGGCCGTGGCAGTCCTATGGAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: VKLSLSAEWKSE*EGWPWQSYGAH Trigger: ATGTGCTCCATAGGACTGCCACGGCCACCCCTCTCATTCACTTTTCCATTCAGCGCTGAGACTAAGTTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 72 bp | AGTTTGTTCCTTCTGATGTTCGGAGTTTCTTCCTTCTaGTGGGTTAGTGGTCTCGCTGGCTCAGGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLFLLMFGVSSF*WVSGLAGSGVK Trigger: CTTCACTCCTGAGCCAGCGAGACCACTAACCCACCAGAAGGAAGAAACTCCGAACATCAGAAGGAACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CAA 72 bp | GGTGAGCAGAAGGACCTGGACCAAACCCCTGGTGTTTaGGTAACAAGTTCATTCAGTCATGCAGCTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GEQKDLDQTPGV*VTSSFSHAALD Trigger: GTCAAGAGCTGCATGACTGAATGAACTTGTTACCAAAACACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS TCA 72 bp | AATACTTGTCATCTCAGTGATGAGCTTTCCATGCGGTaGGCAGAAGGACCTGGACCAAACCCCTGGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: NTCHLSDELSMR*AEGPGPNPWCF Trigger: AAAACACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACCGCATGGAAAGCTCATCACTGAGATGACAAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | CCATCTGCTGAGGGCTACTTCTACTCAATAGAACCTTaGACTCATTCTCCAAGCCCACCCATGATCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: PSAEGYFYSIEP*THSPSPPMIQF Trigger: GAATTGGATCATGGGTGGGCTTGGAGAATGAGTGCAAGGTTCTATTGAGTAGAAGTAGCCCTCAGCAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS GCA 72 bp | CATTCCAAACACAAATGTAAACACTCGCTGATCTACTaGATGCTGGAAAACGCGGCTACTCTTAGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HSKHKCKHSLIY*MLENAATLSRA Trigger: GGCCCTGCTAAGAGTAGCCGCGTTTTCCAGCATGCAGTAGATCAGCGAGTGTTTACATTTGTGTTTGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CAA 72 bp | GAAAGAGCAGTCAAGATGGAAACCACAATGCCTTCTTaGGACCTAGTCCTCAAAGTCACACACCTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: ERAVKMETTMPS*DLVLKVTHLHL Trigger: GAGGTGGAGGTGTGTGACTTTGAGGACTAGGTCCAAAGAAGGCATTGTGGTTTCCATCTTGACTGCTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 90 bp | TATCCAAGGGAAAGAGCAGTCAAGATGGAAACCACAATGCCTTCTTaGGACCTAGTCCTCAAAGTCACACACCTCCACCTCAGCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: YPRERAVKMETTMPS*DLVLKVTHLHLSQI Trigger: AATCTGGCTGAGGTGGAGGTGTGTGACTTTGAGGACTAGGTCCAAAGAAGGCATTGTGGTTTCCATCTTGACTGCTCTTTCCCTTGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 90 bp | GTAGGTCAGCAAGATGGATTTGAGACTGAGCTCCCATCTCCTCGGTaGCAGCACCTGATTAAATCCTTCCTTGGCAATACTTGTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: VGQQDGFETELPSPR*QHLIKSFLGNTCHL Trigger: GAGATGACAAGTATTGCCAAGGAAGGATTTAATCAGGTGCTGCAACCGAGGAGATGGGAGCTCAGTCTCAAATCCATCTTGCTGACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 72 bp | CAAGATGGATTTGAGACTGAGCTCCCATCTCCTCGGTaGCAGCACCTGATTAAATCCTTCCTTGGCAATACT | + |
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Preference number: 6 (lower is better) Translates to: QDGFETELPSPR*QHLIKSFLGNT Trigger: AGTATTGCCAAGGAAGGATTTAATCAGGTGCTGCAACCGAGGAGATGGGAGCTCAGTCTCAAATCCATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CAA 72 bp | TTCATGGGTGATAGTGTGTCCGGAATTGGTGGATTCTaGGTTTCACTGACTTCAAGAATGAAGTCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: FMGDSVSGIGGF*VSLTSRMKSRT Trigger: GGTCCGCGACTTCATTCTTGAAGTCAGTGAAACCAAGAATCCACCAATTCCGGACACACTATCACCCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS TCA 72 bp | CAGAGGCTTGGGCAGCAATACGTTCATAGAAAGCTCTaGTTAATGACTCAGTCTTTGCCCCAAAGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: QRLGQQYVHRKL*LMTQSLPQRTH Trigger: ATGAGTCCTTTGGGGCAAAGACTGAGTCATTAATCAGAGCTTTCTATGAACGTATTGCTGCCCAAGCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS TCA 72 bp | CTCATGAGCATTCCAAACACAAATGTAAACACTCGCTaGTCTACTGCATGCTGGAAAACGCGGCTACTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LMSIPNTNVNTR*STACWKTRLLL Trigger: TAAGAGTAGCCGCGTTTTCCAGCATGCAGTAGATCAGCGAGTGTTTACATTTGTGTTTGGAATGCTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429010.1 ENST00000664691.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS GCA 72 bp | ATAATCGTGTGTGCTATACTTTTATGCAACTGGCCATaGAGGTTTGTTCACATCAGCAACCCCACAAACACC | + |
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Preference number: 6 (lower is better) Translates to: IIVCAILLCNWP*RFVHISNPTNT Trigger: GGTGTTTGTGGGGTTGCTGATGTGAACAAACCTGCATGGCCAGTTGCATAAAAGTATAGCACACACGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 72 bp | TGCAGTGTGCTACAATGTTACAGTAACTACTCTTCATaGGTGATAGTGTGTCCGGAATTGGTGGATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSVLQCYSNYSS*VIVCPELVDSW Trigger: CCAAGAATCCACCAATTCCGGACACACTATCACCCATGAAGAGTAGTTACTGTAACATTGTAGCACACTGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CCA 72 bp | CTGTACATAATCGTGTGTGCTATACTTTTATGCAACTaGCCATGCAGGTTTGTTCACATCAGCAACCCCACA | + |
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Preference number: 6 (lower is better) Translates to: LYIIVCAILLCN*PCRFVHISNPT Trigger: TGTGGGGTTGCTGATGTGAACAAACCTGCATGGCCAGTTGCATAAAAGTATAGCACACACGATTATGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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| CDS CAA 72 bp | AGTGTGGACCCAAAAAGTGAGCAGCAGCAAGATTTATaGCAAAGAGCGAAAGAACAAACTTTCCACAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SVDPKSEQQQDL*QRAKEQTFHSV Trigger: CACACTGTGGAAAGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTTTTTGGGTCCACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429010.1 |
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| CDS CCA 72 bp | CCAGTAACAGTCATTTATTATCACTATCACGTATTATaGGCTGTACATAATCGTGTGTGCTATACTTTTATG | + |
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Preference number: 6 (lower is better) Translates to: PVTVIYYHYHVL*AVHNRVCYTFM Trigger: CATAAAAGTATAGCACACACGATTATGTACAGCCCATAATACGTGATAGTGATAATAAATGACTGTTACTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429010.1 ENST00000668284.1 ENST00000671379.1 |
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