Pregenerated sensors for LINC01446 (Homo sapiens)
Ensembl gene IDs: ENSG00000205628Ensembl transcript IDs: ENST00000380970.2, ENST00000650830.1, ENST00000651244.1, ENST00000651506.1, ENST00000651858.1, ENST00000651951.1, ENST00000652029.1, ENST00000652104.1, ENST00000652440.1, ENST00000654050.1, ENST00000656718.1, ENST00000656885.1, ENST00000658338.1, ENST00000659250.1, ENST00000659481.1, ENST00000659794.1, ENST00000660413.1, ENST00000660945.1, ENST00000660958.1, ENST00000661502.1, ENST00000662259.1, ENST00000662931.1, ENST00000663138.1, ENST00000663312.1, ENST00000663872.1, ENST00000665927.1, ENST00000666213.1, ENST00000668489.1, ENST00000669638.1, ENST00000670507.1, ENST00000670902.1, ENST00000670945.1
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGGCCCGAGAGCCCCAGGGGCCACAGGCTGAAGAACCTGGAGTCTaGCTCCCAAGGGCAGCAGGAGAGGAAGCAACCGCCCAGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: KAREPQGPQAEEPGV*LPRAAGEEATAQHS Trigger: ACTGTGCTGGGCGGTTGCTTCCTCTCCTGCTGCCCTTGGGAGTCAGACTCCAGGTTCTTCAGCCTGTGGCCCCTGGGGCTCTCGGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 28 transcripts: ENST00000380970.2 ENST00000650830.1 ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000652104.1 ENST00000652440.1 ENST00000656718.1 ENST00000656885.1 ENST00000658338.1 ENST00000659250.1 ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000660945.1 ENST00000660958.1 ENST00000661502.1 ENST00000662259.1 ENST00000662931.1 ENST00000663138.1 ENST00000663312.1 ENST00000663872.1 ENST00000665927.1 ENST00000666213.1 ENST00000668489.1 ENST00000669638.1 ENST00000670507.1 ENST00000670945.1 |
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| CDS GCA 90 bp | GTGAAGAGCCGAGAAAGATGCCCTCCTGACCCATCACTGCACCAGTaGTCCAGTGCATCCGGGGGTTACGCCCGTAGTAATCAGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: VKSRERCPPDPSLHQ*SSASGGYARSNQTR Trigger: CCGAGTCTGATTACTACGGGCGTAACCCCCGGATGCACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS TCA 90 bp | ATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATGCCCTCCTaGCCCATCACTGCACCAGTGCTCCAGTGCATCCGGGGGTTACGC | + |
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Preference number: 5 (lower is better) Translates to: IPQGSHSEEPRKMPS*PITAPVLQCIRGLR Trigger: GCGTAACCCCCGGATGCACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS CCA 90 bp | GACTGCTTCATCTCTCCCGTATGCTCTTTCTGTTGGGGAACTGGCTaGCGTTTCAACGCGACGCCCAGAACAGGCCGCACAGAAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: DCFISPVCSFCWGTG*RFNATPRTGRTEAA Trigger: TGCAGCTTCTGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS CCA 90 bp | GTTCTTGGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: VLGVDCFISPVCSFC*GTGWRFNATPRTGR Trigger: GCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS TCA 90 bp | ATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATGCCCTCCTaGCCGGTCGCCATGCCTGGGAAAGAATGCCAAAGCAGGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: IPQGSHSEEPRKMPS*PVAMPGKECQSRAD Trigger: GTCTGCCCTGCTTTGGCATTCTTTCCCAGGCATGGCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS GCA 90 bp | CTTCAGGAATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCCATCACTGCACCAGTGCTCCAGTGCATCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LQESHKVLTVKSRER*PPDPSLHQCSSASG Trigger: CCCGGATGCACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS CCA 90 bp | GAGGAATTTCCTAGAGTAGTTCTACGTCCATCTTGGGGAACTGGCTaGCGTTTCAACGCGACGCCCAGAACAGGCCGCACAGAAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: EEFPRVVLRPSWGTG*RFNATPRTGRTEAA Trigger: TGCAGCTTCTGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGATGGACGTAGAACTACTCTAGGAAATTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000659250.1 ENST00000662259.1 |
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| CDS CCA 90 bp | AATGTTCTTGGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: NVLGVDCFISPVCSF*GTGWRFNATPRTGR Trigger: GCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000651858.1 ENST00000652440.1 ENST00000660413.1 ENST00000660958.1 ENST00000665927.1 |
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| CDS CCA 90 bp | GTACTGCTGAGTCCTAAATTTCAGCGTTGGATAGAGTTGGGGAACTaGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCGCACAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VLLSPKFQRWIELGN*LAFQRDAQNRPHRS Trigger: GCTTCTGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACTCAGCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS CCA 90 bp | GACAGAGCTGGAGTGCCTGTACTGCTGAGTCCTAAATTTCAGCGTTaGATAGAGTTGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DRAGVPVLLSPKFQR*IELGNWLAFQRDAQ Trigger: CTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACTCAGCAGTACAGGCACTCCAGCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS GCA 90 bp | CTTCAGGAATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCGGTCGCCATGCCTGGGAAAGAATGCCAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQESHKVLTVKSRER*PPDRSPCLGKNAKA Trigger: TGCTTTGGCATTCTTTCCCAGGCATGGCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS CCA 90 bp | TTGGCAGTGTTTGAGGAATTTCCTAGAGTAGTTCTACGTCCATCTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LAVFEEFPRVVLRPS*GTGWRFNATPRTGR Trigger: GCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGATGGACGTAGAACTACTCTAGGAAATTCCTCAAACACTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000659250.1 ENST00000662259.1 |
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| CDS GCA 90 bp | TTCATGCTGCTGATAAAACACACGGTCGCCATGCCTGGGAAAGAATaGCAAAGCAGGGCAGACACAGCTGCTGTCTCGAGAACCCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FMLLIKHTVAMPGKE*QSRADTAAVSRTLL Trigger: CAAAAGGGTTCTCGAGACAGCAGCTGTGTCTGCCCTGCTTTGGCATTCTTTCCCAGGCATGGCGACCGTGTGTTTTATCAGCAGCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652029.1 |
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| CDS GCA 90 bp | AGCACTGATGGTCCTGGCAGGAATGCACATTCCCCAGAGTATCTGTaGTTGCCCCTTCACCTTCTTCAAGTGTGTCATCTCCTCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: STDGPGRNAHSPEYL*LPLHLLQVCHLLSV Trigger: CACAGAGAGGAGATGACACACTTGAAGAAGGTGAAGGGGCAAGCACAGATACTCTGGGGAATGTGCATTCCTGCCAGGACCATCAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS CCA 90 bp | AATGCCAAAGCAGGGCAGACACAGCTGCTGTCTCGAGAACCCTTTTaGGAGTATCCAGCGATGGTAGAAGTCACCGTGATCCCTAATCCT | + |
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Preference number: 5 (lower is better) Translates to: NAKAGQTQLLSREPF*EYPAMVEVTVIPNP Trigger: AGGATTAGGGATCACGGTGACTTCTACCATCGCTGGATACTCCCAAAAGGGTTCTCGAGACAGCAGCTGTGTCTGCCCTGCTTTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000652029.1 ENST00000652104.1 ENST00000654050.1 ENST00000656718.1 ENST00000656885.1 ENST00000658338.1 ENST00000659250.1 ENST00000660958.1 ENST00000661502.1 ENST00000663872.1 ENST00000665927.1 ENST00000666213.1 ENST00000670945.1 |
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| CDS CCA 90 bp | GCAGATGCCATATCCTTGCAATGGTTTGTGAAGCCACATGTCATCTaGACCTCATCAGCCCTCCAATGTCCTGTGCCATTCTCCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ADAISLQWFVKPHVI*TSSALQCPVPFSWQ Trigger: CTGCCAGGAGAATGGCACAGGACATTGGAGGGCTGATGAGGTCCAGATGACATGTGGCTTCACAAACCATTGCAAGGATATGGCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS GCA 90 bp | CTTCAGGAATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCCAACTAACACAGCTGTTGCCAGGTGCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LQESHKVLTVKSRER*PPDPTNTAVARCLF Trigger: AAACAAGCACCTGGCAACAGCTGTGTTAGTTGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670507.1 |
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| CDS CCA 90 bp | ATCCCAGGGGGACTCGTAATCCGTAGGATGAGAATGTTCTTGGAGTaGACTGCTTCATCTCTCCCGTATGCTCTTTCTGCTGTGTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: IPGGLVIRRMRMFLE*TASSLPYALSAVCE Trigger: CTCACACACAGCAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTCTCATCCTACGGATTACGAGTCCCCCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000380970.2 ENST00000654050.1 ENST00000656885.1 ENST00000659794.1 ENST00000661502.1 ENST00000662931.1 ENST00000668489.1 |
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| CDS CCA 90 bp | ATCCCAGGGGGACTCGTAATCCGTAGGATGAGAATGTTCTTGGAGTaGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTTGGGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: IPGGLVIRRMRMFLE*TASSLPYALSVGEL Trigger: CAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTCTCATCCTACGGATTACGAGTCCCCCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS GCA 90 bp | CGAGAAAGATGCCCTCCTGACCCAACTAACACAGCTGTTGCCAGGTaGTTGTTTGCAATAACGTCTCTCCACTTACTGCTGTCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RERCPPDPTNTAVAR*LFAITSLHLLLSFL Trigger: AAGGAAGGACAGCAGTAAGTGGAGAGACGTTATTGCAAACAAGCACCTGGCAACAGCTGTGTTAGTTGGGTCAGGAGGGCATCTTTCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670507.1 |
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| CDS TCA 90 bp | CGCGTTCATGGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCTCATTATCAACTCCT | + |
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Preference number: 5 (lower is better) Translates to: RVHGFIFRNPTRFSQ*RAEKDALLTSLSTP Trigger: AGGAGTTGATAATGAGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACCATGAACGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380970.2 |
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| CDS CCA 90 bp | CAAACCATCAGATCTCGAGGCTTATTCACTACCATGACAACGGTATaGGAAAGACTGGCTCCCGTAATTCAATCATCTCCCACTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QTIRSRGLFTTMTTV*ERLAPVIQSSPTGS Trigger: GGACCCAGTGGGAGATGATTGAATTACGGGAGCCAGTCTTTCCCATACCGTTGTCATGGTAGTGAATAAGCCTCGAGATCTGATGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654050.1 ENST00000656885.1 ENST00000660958.1 ENST00000663872.1 |
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| CDS TCA 90 bp | AATGCAGAGCCTGTGGCTCAGCTGAGGACTCACTTATACAGAGCCTaGCATTCAGAAGACCAATGCCAGTGCTTGAGGAAAAATGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: NAEPVAQLRTHLYRA*HSEDQCQCLRKNGK Trigger: TTTGCCATTTTTCCTCAAGCACTGGCATTGGTCTTCTGAATGTCAGGCTCTGTATAAGTGAGTCCTCAGCTGAGCCACAGGCTCTGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS TCA 90 bp | GCTACCCTGCATCTGGAGAAACAGGCAAATTTGGAGCATCACAGCTaGGGCCACCTGAGCCATAAACTGTTGAAACACTTACGTGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: ATLHLEKQANLEHHS*GHLSHKLLKHLRGN Trigger: ATTACCACGTAAGTGTTTCAACAGTTTATGGCTCAGGTGGCCTCAGCTGTGATGCTCCAAATTTGCCTGTTTCTCCAGATGCAGGGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000652440.1 ENST00000659250.1 ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000662259.1 ENST00000663312.1 ENST00000665927.1 ENST00000666213.1 ENST00000669638.1 ENST00000670507.1 |
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| CDS TCA 90 bp | AGAGCCGAGAAAGATGCCCTCCTGACCCTTGAGTCTTCCATGATTTaGAAGTGTCCATGTATTTCGCGGTGTTCTGATGTGTCACAACAT | + |
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Preference number: 5 (lower is better) Translates to: RAEKDALLTLESSMI*KCPCISRCSDVSQH Trigger: ATGTTGTGACACATCAGAACACCGCGAAATACATGGACACTTTCAAATCATGGAAGACTCAAGGGTCAGGAGGGCATCTTTCTCGGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000660945.1 ENST00000662259.1 ENST00000663312.1 |
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| CDS GCA 90 bp | GGCAGAAAGTACATGAATATCTCACATAACCCCTCCCCCTACACATaGATAGACTCACTCATTATCAACTCCTTCCCAGGAGAGGTACAT | + |
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Preference number: 5 (lower is better) Translates to: GRKYMNISHNPSPYT*IDSLIINSFPGEVH Trigger: ATGTACCTCTCCTGGGAAGGAGTTGATAATGAGTGAGTCTATGCATGTGTAGGGGGAGGGGTTATGTGAGATATTCATGTACTTTCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS GCA 90 bp | TTTTTCAAAAATACCTGGTGGGCAACTAACACAGCTGTTGCCAGGTaGTTGTTTGCAATAACGTCTCTCCACTTACTGCTGTCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FFKNTWWATNTAVAR*LFAITSLHLLLSFL Trigger: AAGGAAGGACAGCAGTAAGTGGAGAGACGTTATTGCAAACAAGCACCTGGCAACAGCTGTGTTAGTTGCCCACCAGGTATTTTTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENST00000650830.1 ENST00000651858.1 ENST00000651951.1 ENST00000652029.1 ENST00000652104.1 ENST00000654050.1 ENST00000659250.1 ENST00000661502.1 |
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| CDS CCA 90 bp | TTGCCCTCTCTTTTCTCTGTTGTTCACACCTTCAGTTTCAATCTCTaGGTAGTGTGTAGTATTTTCTGTCTTCTTTGTCGGTCGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: LPSLFSVVHTFSFNL*VVCSIFCLLCRSPC Trigger: GCATGGCGACCGACAAAGAAGACAGAAAATACTACACACTACCCAGAGATTGAAACTGAAGGTGTGAACAACAGAGAAAAGAGAGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661502.1 ENST00000670945.1 |
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| CDS TCA 90 bp | AGCTGTCTTCCAAAAGACTGTACCATTTTGCATTCCCATCAGCAATaGGAATTGCTCCACATCCTCAAGAGTATTTGGTGTCAGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCLPKDCTILHSHQQ*ELLHILKSIWCQCS Trigger: AGAACACTGACACCAAATACTCTTGAGGATGTGGAGCAATTCTCATTGCTGATGGGAATGCAAAATGGTACAGTCTTTTGGAAGACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS TCA 90 bp | CTCACTTATACAGAGCCTGACATTCAGAAGACCAATGCCAGTGCTTaGGGAAAAATGGCAAAGTTAGGGAACTCTCAATCCCTATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LTYTEPDIQKTNASA*GKMAKLGNSQSLFS Trigger: TGAAAATAGGGATTGAGAGTTCCCTAACTTTGCCATTTTTCCTCAAGCACTGGCATTGGTCTTCTGAATGTCAGGCTCTGTATAAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS GCA 90 bp | CACAAGAGTAGAGATCTCCTTATGGAAGACAAGCCCCTTTCTAGCTaGTCAATCAACAAGTTCTTAATGAACACAAGTTCTTCTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: HKSRDLLMEDKPLSS*SINKFLMNTSSSGL Trigger: AAGCCCAGAAGAACTTGTGTTCATTAAGAACTTGTTGATTGAGCAGCTAGAAAGGGGCTTGTCTTCCATAAGGAGATCTCTACTCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS TCA 90 bp | CTCCTTCCCAGGAGAGGTACATTTTTCCAAATTTATGACTTGCATTaGTGCGTCATTATCATCCAAAGTCCACAGGTTACATTAGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLPRRGTFFQIYDLH*CVIIIQSPQVTLGF Trigger: GAACCCTAATGTAACCTGTGGACTTTGGATGATAATGACGCATCAATGCAAGTCATAAATTTGGAAAAATGTACCTCTCCTGGGAAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380970.2 ENST00000668489.1 |
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| CDS TCA 90 bp | AAGGGCAATAAAGGAATTTTATCTCTTGGCACCTTGAGTCTTCCATaGTTTGAAAGTGTCCATGTATTTCGCGGTGTTCTGATGTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: KGNKGILSLGTLSLP*FESVHVFRGVLMCH Trigger: GTGACACATCAGAACACCGCGAAATACATGGACACTTTCAAATCATGGAAGACTCAAGGTGCCAAGAGATAAAATTCCTTTATTGCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS GCA 90 bp | TTCCAAAAGACTGTACCATTTTGCATTCCCATCAGCAATGAGAATTaGTCCACATCCTCAAGAGTATTTGGTGTCAGTGTTCTGGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: FQKTVPFCIPISNEN*STSSRVFGVSVLGF Trigger: AAAACCCAGAACACTGACACCAAATACTCTTGAGGATGTGGAGCAATTCTCATTGCTGATGGGAATGCAAAATGGTACAGTCTTTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS GCA 90 bp | GGTATAAGGTTGTGTACCCACCATTATTGTATTATACAGAGTATTTaGACTGCCCTAAAAATCCTCTGTTCTCTTGCCTGTCCCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GIRLCTHHYCIIQSI*TALKILCSLACPFL Trigger: GAGAAAGGGACAGGCAAGAGAACAGAGGATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTACACAACCTTATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS TCA 90 bp | GTGACAAAATCAAGGGCAATAAAGGAATTTTATCTCTTGGCACCTTaGGTCTTCCATGATTTGAAAGTGTCCATGTATTTCGCGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VTKSRAIKEFYLLAP*VFHDLKVSMYFAVF Trigger: GAACACCGCGAAATACATGGACACTTTCAAATCATGGAAGACTCAAGGTGCCAAGAGATAAAATTCCTTTATTGCCCTTGATTTTGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS GCA 90 bp | CTTCAGGAATCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCATAATATTAGAAGTCATAGTAATTTATACAAT | + |
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Preference number: 5 (lower is better) Translates to: LQESHKVLTVKSRER*PPDHNIRSHSNLYN Trigger: ATTGTATAAATTACTATGACTTCTAATATTATGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652440.1 |
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| CDS CCA 90 bp | TTGCCCTCTCTTTTCTCTGTTGTTCACACCTTCAGTTTCAATCTCTaGGTAGTGTGTAGTATTTTCTGTCTTCTTTGTCGTGGTAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LPSLFSVVHTFSFNL*VVCSIFCLLCRGNF Trigger: AAAATTACCACGACAAAGAAGACAGAAAATACTACACACTACCCAGAGATTGAAACTGAAGGTGTGAACAACAGAGAAAAGAGAGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 |
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| CDS CCA 90 bp | ATGGCTTTCTTAGCTCATTTCTATTCAGCACTGAATAATATTCCATaGTCTGATTGTTCCACAGTTTATTCTTCCATTCACCGACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MAFLAHFYSALNNIP*SDCSTVYSSIHRLK Trigger: CTTCAGTCGGTGAATGGAAGAATAAACTGTGGAACAATCAGACCATGGAATATTATTCAGTGCTGAATAGAAATGAGCTAAGAAAGCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS TCA 72 bp | GAGCCCCAGGGGCCACAGGCTGAAGAACCTGGAGTCTaGCTCCCAAGGGCAGCAGGAGAGGAAGCAACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPQGPQAEEPGV*LPRAAGEEATA Trigger: GGCGGTTGCTTCCTCTCCTGCTGCCCTTGGGAGTCAGACTCCAGGTTCTTCAGCCTGTGGCCCCTGGGGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 28 transcripts: ENST00000380970.2 ENST00000650830.1 ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000652104.1 ENST00000652440.1 ENST00000656718.1 ENST00000656885.1 ENST00000658338.1 ENST00000659250.1 ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000660945.1 ENST00000660958.1 ENST00000661502.1 ENST00000662259.1 ENST00000662931.1 ENST00000663138.1 ENST00000663312.1 ENST00000663872.1 ENST00000665927.1 ENST00000666213.1 ENST00000668489.1 ENST00000669638.1 ENST00000670507.1 ENST00000670945.1 |
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| CDS CCA 72 bp | AGGCGTGTGTGCAGGGAGCTTACTTGGGGAACTGGCTaGCGTTTCAACGCGACGCCCAGAACAGGCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RRVCRELTWGTG*RFNATPRTGRT Trigger: TGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGTAAGCTCCCTGCACACACGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000380970.2 ENST00000654050.1 ENST00000656885.1 ENST00000659794.1 ENST00000661502.1 ENST00000662931.1 ENST00000668489.1 |
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| CDS CCA 72 bp | CAACAGGCTATCAGGCGTGTGTGCAGGGAGCTTACTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QQAIRRVCRELT*GTGWRFNATPR Trigger: TCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGTAAGCTCCCTGCACACACGCCTGATAGCCTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000380970.2 ENST00000654050.1 ENST00000656885.1 ENST00000659794.1 ENST00000661502.1 ENST00000662931.1 ENST00000668489.1 |
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| CDS CCA 72 bp | TTCAACACTCCTGTAATCCCAGGGGGATTGGGGAACTaGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FNTPVIPGGLGN*LAFQRDAQNRP Trigger: CGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAATCCCCCTGGGATTACAGGAGTGTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000651951.1 ENST00000656718.1 ENST00000659481.1 ENST00000660945.1 ENST00000663138.1 ENST00000663872.1 ENST00000666213.1 ENST00000670507.1 |
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| CDS TCA 72 bp | GGTTCTCACAGTGAAGAGCCGAGAAAGATGCCCTCCTaGCCCATCACTGCACCAGTGCTCCAGTGCATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSHSEEPRKMPS*PITAPVLQCIR Trigger: CCGGATGCACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS GCA 72 bp | GCAGAAGGACGGAACCAACAGGCTATCAGGCGTGTGTaGAGGGAGCTTACTTGGGGAACTGGCTGGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AEGRNQQAIRRV*RELTWGTGWRF Trigger: GAAACGCCAGCCAGTTCCCCAAGTAAGCTCCCTGCACACACGCCTGATAGCCTGTTGGTTCCGTCCTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000380970.2 ENST00000654050.1 ENST00000656885.1 ENST00000659794.1 ENST00000661502.1 ENST00000662931.1 ENST00000668489.1 |
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| CDS GCA 72 bp | AAGAGCCGAGAAAGATGCCCTCCTGACCGGTCGCCATaGCTGGGAAAGAATGCCAAAGCAGGGCAGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: KSRERCPPDRSP*LGKNAKAGQTQ Trigger: CTGTGTCTGCCCTGCTTTGGCATTCTTTCCCAGGCATGGCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS GCA 72 bp | CGAGAAAGATGCCCTCCTGACCCATCACTGCACCAGTaGTCCAGTGCATCCGGGGGTTACGCCCGTAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RERCPPDPSLHQ*SSASGGYARSN Trigger: ATTACTACGGGCGTAACCCCCGGATGCACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669638.1 |
||
| CDS CCA 72 bp | CCTAGAGTAGTTCTACGTCCATCTTGGGGAACTGGCTaGCGTTTCAACGCGACGCCCAGAACAGGCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PRVVLRPSWGTG*RFNATPRTGRT Trigger: TGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGATGGACGTAGAACTACTCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000659250.1 ENST00000662259.1 |
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| CDS CCA 72 bp | ATCTCTCCCGTATGCTCTTTCTGTTGGGGAACTGGCTaGCGTTTCAACGCGACGCCCAGAACAGGCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ISPVCSFCWGTG*RFNATPRTGRT Trigger: TGTGCGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS CAA 72 bp | AAAGATGCCCTCCTGACCGCCTGTAATCCGAGCACTTaGGAAGGCCGAGGCGGGTGGATCATGAGGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KDALLTACNPST*EGRGGWIMRSG Trigger: TCCTGACCTCATGATCCACCCGCCTCGGCCTTCCAAAGTGCTCGGATTACAGGCGGTCAGGAGGGCATCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651244.1 |
||
| CDS CAA 90 bp | GGAGTGCCTGTACTGCTGAGTCCTAAATTTCAGCGTTGGATAGAGTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVPVLLSPKFQRWIE*GNWLAFQRDAQNRP Trigger: CGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACTCAGCAGTACAGGCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS CAA 90 bp | TGTTCTTGGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CSWSGLLHLSRMLFL*GNWLAFQRDAQNRP Trigger: CGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS TCA 72 bp | GGTTCTCACAGTGAAGAGCCGAGAAAGATGCCCTCCTaGCCGCCTGTAATCCGAGCACTTTGGAAGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSHSEEPRKMPS*PPVIRALWKAE Trigger: CTCGGCCTTCCAAAGTGCTCGGATTACAGGCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651244.1 |
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| CDS TCA 72 bp | GGTTCTCACAGTGAAGAGCCGAGAAAGATGCCCTCCTaGCCGGTCGCCATGCCTGGGAAAGAATGCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSHSEEPRKMPS*PVAMPGKECQS Trigger: GCTTTGGCATTCTTTCCCAGGCATGGCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS GCA 72 bp | ATGTCATCTGGACCTCATCAGCCCTCCAATGTCCTGTaGCATTCTCCTGGCAGCTCAGCTCTCCTCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MSSGPHQPSNVL*HSPGSSALLCH Trigger: GTGGCAGAGGAGAGCTGAGCTGCCAGGAGAATGGCACAGGACATTGGAGGGCTGATGAGGTCCAGATGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS CCA 72 bp | GGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVDCFISPVCSF*GTGWRFNATPR Trigger: TCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000651858.1 ENST00000652440.1 ENST00000660413.1 ENST00000660958.1 ENST00000665927.1 |
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| CDS CCA 72 bp | GTGGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VDCFISPVCSFC*GTGWRFNATPR Trigger: TCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS CAA 72 bp | TGGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WSGLLHLSRMLF*GNWLAFQRDAQ Trigger: CTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000651858.1 ENST00000652440.1 ENST00000660413.1 ENST00000660958.1 ENST00000665927.1 |
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| CDS CAA 72 bp | AGTGGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLLHLSRMLFL*GNWLAFQRDAQ Trigger: CTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
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| CDS CAA 90 bp | GAATGTTCTTGGAGTGGACTGCTTCATCTCTCCCGTATGCTCTTTTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ECSWSGLLHLSRMLF*GNWLAFQRDAQNRP Trigger: CGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000651858.1 ENST00000652440.1 ENST00000660413.1 ENST00000660958.1 ENST00000665927.1 |
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| CDS GCA 72 bp | TCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCGGTCGCCATGCCTGGGAAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SHKVLTVKSRER*PPDRSPCLGKN Trigger: ATTCTTTCCCAGGCATGGCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS GCA 72 bp | CTGTCTTCTTTGTCGGTCGCCATGCCTGGGAAAGAATaGCAAAGCAGGGCAGACACAGCTGCTGTCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSSLSVAMPGKE*QSRADTAAVSR Trigger: TCTCGAGACAGCAGCTGTGTCTGCCCTGCTTTGGCATTCTTTCCCAGGCATGGCGACCGACAAAGAAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661502.1 ENST00000670945.1 |
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| CDS GCA 72 bp | TCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCCATCACTGCACCAGTGCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHKVLTVKSRER*PPDPSLHQCSS Trigger: ACTGGAGCACTGGTGCAGTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS CCA 72 bp | GCAGGGCAGACACAGCTGCTGTCTCGAGAACCCTTTTaGGAGTATCCAGCGATGGTAGAAGTCACCGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: AGQTQLLSREPF*EYPAMVEVTVI Trigger: GATCACGGTGACTTCTACCATCGCTGGATACTCCCAAAAGGGTTCTCGAGACAGCAGCTGTGTCTGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000652029.1 ENST00000652104.1 ENST00000654050.1 ENST00000656718.1 ENST00000656885.1 ENST00000658338.1 ENST00000659250.1 ENST00000660958.1 ENST00000661502.1 ENST00000663872.1 ENST00000665927.1 ENST00000666213.1 ENST00000670945.1 |
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| CDS CCA 72 bp | AGTCCTAAATTTCAGCGTTGGATAGAGTTGGGGAACTaGCTGGCGTTTCAACGCGACGCCCAGAACAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPKFQRWIELGN*LAFQRDAQNRP Trigger: CGGCCTGTTCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTGR Trigger: GCGACCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659250.1 ENST00000665927.1 ENST00000666213.1 |
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| CDS GCA 72 bp | CTGATAAAACACACGGTCGCCATGCCTGGGAAAGAATaGCAAAGCAGGGCAGACACAGCTGCTGTCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIKHTVAMPGKE*QSRADTAAVSR Trigger: TCTCGAGACAGCAGCTGTGTCTGCCCTGCTTTGGCATTCTTTCCCAGGCATGGCGACCGTGTGTTTTATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652029.1 |
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| CDS GCA 72 bp | TCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCCAACTAACACAGCTGTTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHKVLTVKSRER*PPDPTNTAVAR Trigger: CCTGGCAACAGCTGTGTTAGTTGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670507.1 |
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| CDS CCA 72 bp | TCTACGTCCATCCGATCCATAGATCAAGGGAGCTGTTaGCATGGGTGTGGACAGAGCTGGAGTGCCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: STSIRSIDQGSC*HGCGQSWSACT Trigger: AGTACAGGCACTCCAGCTCTGTCCACACCCATGCCAACAGCTCCCTTGATCTATGGATCGGATGGACGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS CAA 72 bp | AGCAGGGCAGACACAGCTGCTGTCTCGAGAACCCTTTaGGGAGTATCCAGCGATGGTAGAAGTCACCGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRADTAAVSRTL*GVSSDGRSHRD Trigger: ATCACGGTGACTTCTACCATCGCTGGATACTCCCAAAAGGGTTCTCGAGACAGCAGCTGTGTCTGCCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000652029.1 ENST00000652104.1 ENST00000654050.1 ENST00000656718.1 ENST00000656885.1 ENST00000658338.1 ENST00000659250.1 ENST00000660958.1 ENST00000661502.1 ENST00000663872.1 ENST00000665927.1 ENST00000666213.1 ENST00000670945.1 |
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| CDS CAA 72 bp | GTACTGCTGAGTCCTAAATTTCAGCGTTGGATAGAGTaGGGGAACTGGCTGGCGTTTCAACGCGACGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLLSPKFQRWIE*GNWLAFQRDAQ Trigger: CTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACTCAGCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS CAA 72 bp | TTCTACGTCCATCCGATCCATAGATCAAGGGAGCTGTaGGCATGGGTGTGGACAGAGCTGGAGTGCCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FYVHPIHRSREL*AWVWTELECLY Trigger: GTACAGGCACTCCAGCTCTGTCCACACCCATGCCAACAGCTCCCTTGATCTATGGATCGGATGGACGTAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS TCA 72 bp | TGTGGACTGCCAGGAATGCAGAGCCTGTGGCTCAGCTaGGGACTCACTTATACAGAGCCTGACATTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CGLPGMQSLWLS*GLTYTEPDIQK Trigger: CTTCTGAATGTCAGGCTCTGTATAAGTGAGTCCTCAGCTGAGCCACAGGCTCTGCATTCCTGGCAGTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTAC Trigger: ACAGGCGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651244.1 |
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| CDS GCA 72 bp | GGTCCTGGCAGGAATGCACATTCCCCAGAGTATCTGTaGTTGCCCCTTCACCTTCTTCAAGTGTGTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGRNAHSPEYL*LPLHLLQVCHL Trigger: GAGATGACACACTTGAAGAAGGTGAAGGGGCAAGCACAGATACTCTGGGGAATGTGCATTCCTGCCAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS CCA 72 bp | GGAGTGCCTGTACTGCTGAGTCCTAAATTTCAGCGTTaGATAGAGTTGGGGAACTGGCTGGCGTTTCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPVLLSPKFQR*IELGNWLAFQR Trigger: GCGTTGAAACGCCAGCCAGTTCCCCAACTCTATCCAACGCTGAAATTTAGGACTCAGCAGTACAGGCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652104.1 |
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| CDS CAA 90 bp | ACTGATGGTCCTGGCAGGAATGCACATTCCCCAGAGTATCTGTGCTaGCCCCTTCACCTTCTTCAAGTGTGTCATCTCCTCTCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TDGPGRNAHSPEYLC*PLHLLQVCHLLSVR Trigger: CCTCACAGAGAGGAGATGACACACTTGAAGAAGGTGAAGGGGCAAGCACAGATACTCTGGGGAATGTGCATTCCTGCCAGGACCATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTLE Trigger: CTCAAGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000660945.1 ENST00000662259.1 ENST00000663312.1 |
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| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTHH Trigger: GTGATGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS GCA 72 bp | CTGGCAGGAATGCACATTCCCCAGAGTATCTGTGCTTaGCCCTTCACCTTCTTCAAGTGTGTCATCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAGMHIPQSICA*PFTFFKCVISS Trigger: AGAGGAGATGACACACTTGAAGAAGGTGAAGGGGCAAGCACAGATACTCTGGGGAATGTGCATTCCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS GCA 72 bp | TGCCCTCCTGACCCAACTAACACAGCTGTTGCCAGGTaGTTGTTTGCAATAACGTCTCTCCACTTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CPPDPTNTAVAR*LFAITSLHLLL Trigger: CAGCAGTAAGTGGAGAGACGTTATTGCAAACAAGCACCTGGCAACAGCTGTGTTAGTTGGGTCAGGAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670507.1 |
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| CDS CCA 72 bp | TTTGAGGAATTTCCTAGAGTAGTTCTACGTCCATCTTaGGGAACTGGCTGGCGTTTCAACGCGACGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FEEFPRVVLRPS*GTGWRFNATPR Trigger: TCTGGGCGTCGCGTTGAAACGCCAGCCAGTTCCCCAAGATGGACGTAGAACTACTCTAGGAAATTCCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000659250.1 ENST00000662259.1 |
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| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTQL Trigger: TAGTTGGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670507.1 |
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| CDS GCA 72 bp | AATACCTGGTGGGCAACTAACACAGCTGTTGCCAGGTaGTTGTTTGCAATAACGTCTCTCCACTTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NTWWATNTAVAR*LFAITSLHLLL Trigger: CAGCAGTAAGTGGAGAGACGTTATTGCAAACAAGCACCTGGCAACAGCTGTGTTAGTTGCCCACCAGGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000650830.1 ENST00000651858.1 ENST00000651951.1 ENST00000652029.1 ENST00000652104.1 ENST00000654050.1 ENST00000659250.1 ENST00000661502.1 |
||
| CDS CCA 72 bp | GGACTCGTAATCCGTAGGATGAGAATGTTCTTGGAGTaGACTGCTTCATCTCTCCCGTATGCTCTTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLVIRRMRMFLE*TASSLPYALSA Trigger: AGCAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTCTCATCCTACGGATTACGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000380970.2 ENST00000654050.1 ENST00000656885.1 ENST00000659794.1 ENST00000661502.1 ENST00000662931.1 ENST00000668489.1 |
||
| CDS CCA 72 bp | ATATCCTTGCAATGGTTTGTGAAGCCACATGTCATCTaGACCTCATCAGCCCTCCAATGTCCTGTGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLQWFVKPHVI*TSSALQCPVPF Trigger: GAATGGCACAGGACATTGGAGGGCTGATGAGGTCCAGATGACATGTGGCTTCACAAACCATTGCAAGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
||
| CDS CCA 72 bp | GGACTCGTAATCCGTAGGATGAGAATGTTCTTGGAGTaGACTGCTTCATCTCTCCCGTATGCTCTTTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLVIRRMRMFLE*TASSLPYALFG Trigger: CCCAAAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTCTCATCCTACGGATTACGAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000651858.1 ENST00000652440.1 ENST00000660413.1 ENST00000660958.1 ENST00000665927.1 |
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| CDS CAA 90 bp | GGTTCCAGGCTCAATTGGTGGCAGAAGTGCGAGCTGAAACATTTCTaGATGTCCACACATGGCATACACCTTTCATATCCCACGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSRLNWWQKCELKHF*MSTHGIHLSYPTSS Trigger: AGAAGACGTGGGATATGAAAGGTGTATGCCATGTGTGGACATCAAGAAATGTTTCAGCTCGCACTTCTGCCACCAATTGAGCCTGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
||
| CDS TCA 72 bp | GGTTTCATCTTCAGGAATCCCACAAGGTTCTCACAGTaGAGAGCCGAGAAAGATGCCCTCCTGACCATAATA | + |
|
Preference number: 6 (lower is better) Translates to: GFIFRNPTRFSQ*RAEKDALLTII Trigger: TATTATGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGATTCCTGAAGATGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652440.1 |
||
| CDS CCA 72 bp | GAATGCTGCAGTTTTAGCAAGACTCCCTCGCGTTCATaGTTTCATCTTCAGGAATCCCACAAGGTTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: ECCSFSKTPSRS*FHLQESHKVLT Trigger: TGTGAGAACCTTGTGGGATTCCTGAAGATGAAACCATGAACGCGAGGGAGTCTTGCTAAAACTGCAGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000652440.1 ENST00000659250.1 ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000660945.1 ENST00000662259.1 ENST00000663312.1 ENST00000665927.1 ENST00000666213.1 ENST00000669638.1 ENST00000670507.1 |
||
| CDS CCA 72 bp | GGACTCGTAATCCGTAGGATGAGAATGTTCTTGGAGTaGACTGCTTCATCTCTCCCGTATGCTCTTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLVIRRMRMFLE*TASSLPYALSV Trigger: AACAGAAAGAGCATACGGGAGAGATGAAGCAGTCCACTCCAAGAACATTCTCATCCTACGGATTACGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658338.1 ENST00000663312.1 ENST00000669638.1 ENST00000670945.1 |
||
| CDS CAA 90 bp | GTAATCCCAGGGGGACTGAATATTTGGCTTTCAGCCATGAAGTACTaGGCAGTGTTTGAGGAATTTCCTAGAGTAGTTCTACGTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VIPGGLNIWLSAMKY*AVFEEFPRVVLRPS Trigger: GGATGGACGTAGAACTACTCTAGGAAATTCCTCAAACACTGCCAAGTACTTCATGGCTGAAAGCCAAATATTCAGTCCCCCTGGGATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000652104.1 ENST00000670902.1 |
||
| CDS TCA 72 bp | ACAGAGCCTGACATTCAGAAGACCAATGCCAGTGCTTaGGGAAAAATGGCAAAGTTAGGGAACTCTCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: TEPDIQKTNASA*GKMAKLGNSQS Trigger: GGATTGAGAGTTCCCTAACTTTGCCATTTTTCCTCAAGCACTGGCATTGGTCTTCTGAATGTCAGGCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
||
| CDS GCA 72 bp | GCTAAGAATAATGGCCTCCAGCTCCAGTCATGTCACTaGAAAGGACATACTCTCATTCCTTTTTATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AKNNGLQLQSCH*KGHTLIPFYGC Trigger: GCAGCCATAAAAAGGAATGAGAGTATGTCCTTTGCAGTGACATGACTGGAGCTGGAGGCCATTATTCTTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CCA 72 bp | TTACAGTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGTCAAGGTGGAGCAAAATTCACATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LQFHMAGEASQS*QKSRWSKIHIL Trigger: TAAGATGTGAATTTTGCTCCACCTTGACTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654050.1 ENST00000656885.1 ENST00000660958.1 ENST00000663872.1 |
||
| CDS CAA 72 bp | CTCAATTGGTGGCAGAAGTGCGAGCTGAAACATTTCTaGATGTCCACACATGGCATACACCTTTCATATCCC | + |
|
Preference number: 6 (lower is better) Translates to: LNWWQKCELKHF*MSTHGIHLSYP Trigger: GGGATATGAAAGGTGTATGCCATGTGTGGACATCAAGAAATGTTTCAGCTCGCACTTCTGCCACCAATTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
||
| CDS CAA 90 bp | GTAATCCCAGGGGGACTGAATATTTGGCTTTCAGCCATGAAGTACTaGGCAGTGTTTGAGGAATTTCCTAGAGTAGTTCTACGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VIPGGLNIWLSAMKY*AVFEEFPRVVLRPS Trigger: AGATGGACGTAGAACTACTCTAGGAAATTCCTCAAACACTGCCAAGTACTTCATGGCTGAAAGCCAAATATTCAGTCCCCCTGGGATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000659250.1 ENST00000662259.1 |
||
| CDS GCA 72 bp | AACCTCCAAGCTGTCTTCCAAAAGACTGTACCATTTTaGATTCCCATCAGCAATGAGAATTGCTCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: NLQAVFQKTVPF*IPISNENCSTS Trigger: GGATGTGGAGCAATTCTCATTGCTGATGGGAATGCAAAATGGTACAGTCTTTTGGAAGACAGCTTGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
||
| CDS CAA 90 bp | TTCTTCCATTCACCGACTGAAGGACATCTTGGTTGCTTCCAAGTCTaGGAAATTATGTGTAAAACTTCTGTAAGCGTCCACGTGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FFHSPTEGHLGCFQV*EIMCKTSVSVHVPV Trigger: AACAGGCACGTGGACGCTTACAGAAGTTTTACACATAATTTCCAAGACTTGGAAGCAACCAAGATGTCCTTCAGTCGGTGAATGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
||
| CDS TCA 72 bp | TTTGAATTCCAAAATGAGCAGCATAAACAAAGGATATaGAGTGTGTGGACTGCCAGGAATGCAGAGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FEFQNEQHKQRI*SVWTARNAEPV Trigger: CACAGGCTCTGCATTCCTGGCAGTCCACACACTTCATATCCTTTGTTTATGCTGCTCATTTTGGAATTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS GCA 72 bp | ATGAGCAGTCAGTGTGTGTCATTATCTGTTGAAATGTaGCCCACCAACCTGTTTGAATTCCAAAATGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MSSQCVSLSVEM*PTNLFEFQNEQ Trigger: CTGCTCATTTTGGAATTCAAACAGGTTGGTGGGGCACATTTCAACAGATAATGACACACACTGACTGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS GCA 72 bp | TCCCACAAGGTTCTCACAGTGAAGAGCCGAGAAAGATaGCCTCCTGACCATAATATTAGAAGTCATAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SHKVLTVKSRER*PPDHNIRSHSN Trigger: ATTACTATGACTTCTAATATTATGGTCAGGAGGGCATCTTTCTCGGCTCTTCACTGTGAGAACCTTGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652440.1 |
||
| CDS GCA 72 bp | TTGAATCCATCAAAGAACTCAGGAGAAACAGCAAACTaGTACCCTGCATCTGGAGAAACAGGCAAATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LNPSKNSGETAN*YPASGETGKFG Trigger: TCCAAATTTGCCTGTTTCTCCAGATGCAGGGTAGCAGTTTGCTGTTTCTCCTGAGTTCTTTGATGGATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000652440.1 ENST00000659250.1 ENST00000659481.1 ENST00000659794.1 ENST00000660413.1 ENST00000662259.1 ENST00000663312.1 ENST00000665927.1 ENST00000666213.1 ENST00000669638.1 ENST00000670507.1 |
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| CDS CCA 72 bp | GAAGTGCGAGCTGAAACATTTCTTGATGTCCACACATaGCATACACCTTTCATATCCCACGTCTTCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EVRAETFLDVHT*HTPFISHVFFV Trigger: AACAAAGAAGACGTGGGATATGAAAGGTGTATGCCATGTGTGGACATCAAGAAATGTTTCAGCTCGCACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000380970.2 ENST00000651244.1 ENST00000660945.1 ENST00000661502.1 ENST00000662931.1 ENST00000663138.1 ENST00000670902.1 ENST00000670945.1 |
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| CDS CAA 72 bp | TCAGCAATGAGAATTGCTCCACATCCTCAAGAGTATTaGGTGTCAGTGTTCTGGGTTTTGGTCATTCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAMRIAPHPQEY*VSVFWVLVILG Trigger: TCCTAGAATGACCAAAACCCAGAACACTGACACCAAATACTCTTGAGGATGTGGAGCAATTCTCATTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CAA 72 bp | TCACCGACTGAAGGACATCTTGGTTGCTTCCAAGTCTaGGAAATTATGTGTAAAACTTCTGTAAGCGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPTEGHLGCFQV*EIMCKTSVSVH Trigger: GTGGACGCTTACAGAAGTTTTACACATAATTTCCAAGACTTGGAAGCAACCAAGATGTCCTTCAGTCGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CAA 72 bp | GGGGGACTGAATATTTGGCTTTCAGCCATGAAGTACTaGGCAGTGTTTGAGGAATTTCCTAGAGTAGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GGLNIWLSAMKY*AVFEEFPRVVL Trigger: TAGAACTACTCTAGGAAATTCCTCAAACACTGCCAAGTACTTCATGGCTGAAAGCCAAATATTCAGTCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000650830.1 ENST00000651506.1 ENST00000652104.1 ENST00000659250.1 ENST00000662259.1 ENST00000670902.1 |
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| CDS TCA 72 bp | CCAAAAGACTGTACCATTTTGCATTCCCATCAGCAATaGGAATTGCTCCACATCCTCAAGAGTATTTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PKDCTILHSHQQ*ELLHILKSIWC Trigger: ACACCAAATACTCTTGAGGATGTGGAGCAATTCTCATTGCTGATGGGAATGCAAAATGGTACAGTCTTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS TCA 72 bp | CTGATTGTTCCACAGTTTATTCTTCCATTCACCGACTaGAGGACATCTTGGTTGCTTCCAAGTCTTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LIVPQFILPFTD*RTSWLLPSLGN Trigger: ATTTCCAAGACTTGGAAGCAACCAAGATGTCCTTCAGTCGGTGAATGGAAGAATAAACTGTGGAACAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CCA 72 bp | CTAGTCTTTGCGGAATCACTACACCATCTTCCACAGTaGTTGAACTTCCACCAAAAGTATAAAAGCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LVFAESLHHLPQ*LNFHQKYKSIP Trigger: AGGAATGCTTTTATACTTTTGGTGGAAGTTCAACCACTGTGGAAGATGGTGTAGTGATTCCGCAAAGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS CAA 72 bp | TTAGGGTTCAGTCTTGGTGTTGAACATTCTGTGGGTTaGGACAAAGGTATAAGGTTGTGTACCCACCATTAT | + |
|
Preference number: 6 (lower is better) Translates to: LGFSLGVEHSVG*DKGIRLCTHHY Trigger: ATAATGGTGGGTACACAACCTTATACCTTTGTCCAAACCCACAGAATGTTCAACACCAAGACTGAACCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS CAA 90 bp | AGGTATAAGGTTGTGTACCCACCATTATTGTATTATACAGAGTATTaGCACTGCCCTAAAAATCCTCTGTTCTCTTGCCTGTCCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RYKVVYPPLLYYTEY*HCPKNPLFSCLSLS Trigger: AGAAAGGGACAGGCAAGAGAACAGAGGATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTACACAACCTTATACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS TCA 72 bp | AAAGGAATTTTATCTCTTGGCACCTTGAGTCTTCCATaGTTTGAAAGTGTCCATGTATTTCGCGGTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGILSLGTLSLP*FESVHVFRGVL Trigger: CAGAACACCGCGAAATACATGGACACTTTCAAATCATGGAAGACTCAAGGTGCCAAGAGATAAAATTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669638.1 |
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| CDS GCA 72 bp | AGGAGATGCATAGTGGTGTCTCATTGTTGTTTTAATTaGACTTTTCTGATGACATCTGACGTGCAGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRCIVVSHCCFN*TFLMTSDVQHL Trigger: AAGATGCTGCACGTCAGATGTCATCAGAAAAGTGCAATTAAAACAACAATGAGACACCACTATGCATCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS GCA 72 bp | AGAGATCTCCTTATGGAAGACAAGCCCCTTTCTAGCTaGTCAATCAACAAGTTCTTAATGAACACAAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RDLLMEDKPLSS*SINKFLMNTSS Trigger: AGAACTTGTGTTCATTAAGAACTTGTTGATTGAGCAGCTAGAAAGGGGCTTGTCTTCCATAAGGAGATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000651506.1 ENST00000651858.1 ENST00000651951.1 ENST00000656885.1 ENST00000658338.1 ENST00000663872.1 |
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| CDS GCA 72 bp | TACCCACCATTATTGTATTATACAGAGTATTTGCACTaGCCTAAAAATCCTCTGTTCTCTTGCCTGTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YPPLLYYTEYLH*PKNPLFSCLSL Trigger: AAGGGACAGGCAAGAGAACAGAGGATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS CAA 90 bp | TTCTGTGGGTTTGGACAAAGGTATAAGGTTGTGTACCCACCATTATaGTATTATACAGAGTATTTGCACTGCCCTAAAAATCCTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FCGFGQRYKVVYPPL*YYTEYLHCPKNPLF Trigger: GAACAGAGGATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTACACAACCTTATACCTTTGTCCAAACCCACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS CAA 90 bp | CAGGTTACATTAGGGTTCAGTCTTGGTGTTGAACATTCTGTGGGTTaGGACAAAGGTATAAGGTTGTGTACCCACCATTATTGTATTATA | + |
|
Preference number: 6 (lower is better) Translates to: QVTLGFSLGVEHSVG*DKGIRLCTHHYCII Trigger: TATAATACAATAATGGTGGGTACACAACCTTATACCTTTGTCCAAACCCACAGAATGTTCAACACCAAGACTGAACCCTAATGTAACCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS TCA 72 bp | TCTTTGCGGAATCACTACACCATCTTCCACAGTGGTTaGACTTCCACCAAAAGTATAAAAGCATTCCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLRNHYTIFHSG*TSTKSIKAFLF Trigger: AAAAAGGAATGCTTTTATACTTTTGGTGGAAGTTCAACCACTGTGGAAGATGGTGTAGTGATTCCGCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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| CDS GCA 72 bp | TTGTGTACCCACCATTATTGTATTATACAGAGTATTTaGACTGCCCTAAAAATCCTCTGTTCTCTTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCTHHYCIIQSI*TALKILCSLAC Trigger: ACAGGCAAGAGAACAGAGGATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTACACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CAA 90 bp | TTTCCTACCTGTCTATCATCTTTGGTGAGGTGTCTGTTAAGGTCTTaGGCCCATTTTTCAACCAAGTTGTTCATTTTCTTATTGTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPTCLSSLVRCLLRS*AHFSTKLFIFLLLS Trigger: ACTCAACAATAAGAAAATGAACAACTTGGTTGAAAAATGGGCCAAAGACCTTAACAGACACCTCACCAAAGATGATAGACAGGTAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CAA 72 bp | TGTCTATCATCTTTGGTGAGGTGTCTGTTAAGGTCTTaGGCCCATTTTTCAACCAAGTTGTTCATTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CLSSLVRCLLRS*AHFSTKLFIFL Trigger: TAAGAAAATGAACAACTTGGTTGAAAAATGGGCCAAAGACCTTAACAGACACCTCACCAAAGATGATAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CAA 72 bp | GTATGTCTTCATTTGAGAATTGTCTGTTCACGTCCTTaGCCCACTTTTAGTGTAATTTTAGGTTCACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VCLHLRIVCSRP*PTFSVILGSQQ Trigger: TTGCTGTGAACCTAAAATTACACTAAAAGTGGGCAAAGGACGTGAACAGACAATTCTCAAATGAAGACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CAA 90 bp | AGAATAATTTATACTTGTTTGGGTATATACCCAGTAATGGGATTGTaGGGTCAAATGGTATTTCTGCCTCTAGTCTTTGCGGAATCACTA | + |
|
Preference number: 6 (lower is better) Translates to: RIIYTCLGIYPVMGL*GQMVFLPLVFAESL Trigger: TAGTGATTCCGCAAAGACTAGAGGCAGAAATACCATTTGACCCAACAATCCCATTACTGGGTATATACCCAAACAAGTATAAATTATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CAA 90 bp | AACAGAATAATTTATACTTGTTTGGGTATATACCCAGTAATGGGATaGTTGGGTCAAATGGTATTTCTGCCTCTAGTCTTTGCGGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: NRIIYTCLGIYPVMG*LGQMVFLPLVFAES Trigger: TGATTCCGCAAAGACTAGAGGCAGAAATACCATTTGACCCAACAATCCCATTACTGGGTATATACCCAAACAAGTATAAATTATTCTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CAA 72 bp | GTTGAACATTCTGTGGGTTTGGACAAAGGTATAAGGTaGTGTACCCACCATTATTGTATTATACAGAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: VEHSVGLDKGIR*CTHHYCIIQSI Trigger: AATACTCTGTATAATACAATAATGGTGGGTACACAACCTTATACCTTTGTCCAAACCCACAGAATGTTCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668489.1 |
||
| CDS CCA 72 bp | TTAGCTCATTTCTATTCAGCACTGAATAATATTCCATaGTCTGATTGTTCCACAGTTTATTCTTCCATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAHFYSALNNIP*SDCSTVYSSIH Trigger: GTGAATGGAAGAATAAACTGTGGAACAATCAGACCATGGAATATTATTCAGTGCTGAATAGAAATGAGCTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000652104.1 ENST00000656718.1 ENST00000668489.1 |
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| CDS CAA 72 bp | ATAATGCTTTTTGACATCAAAGGAAATTTGGGAGTGTaGGTAACATACTATTTCTTCATGAGGGAGTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IMLFDIKGNLGV*VTYYFFMRELD Trigger: GTCTAACTCCCTCATGAAGAAATAGTATGTTACCAACACTCCCAAATTTCCTTTGATGTCAAAAAGCATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380970.2 ENST00000660945.1 ENST00000663138.1 ENST00000670902.1 |
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| CDS CAA 72 bp | TTTGGACAAAGGTATAAGGTTGTGTACCCACCATTATaGTATTATACAGAGTATTTGCACTGCCCTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: FGQRYKVVYPPL*YYTEYLHCPKN Trigger: ATTTTTAGGGCAGTGCAAATACTCTGTATAATACAATAATGGTGGGTACACAACCTTATACCTTTGTCCAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668489.1 |
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