Pregenerated sensors for LINC01445 (Homo sapiens)
Ensembl gene IDs: ENSG00000231427Ensembl transcript IDs: ENST00000426205.2, ENST00000458615.5, ENST00000654826.1, ENST00000654951.1, ENST00000659445.1, ENST00000660245.1, ENST00000661025.1, ENST00000666100.1, ENST00000666668.1, ENST00000668540.1, ENST00000669187.1, ENST00000669611.1, ENST00000669718.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGTGGCAGTAAGGGTGTGTCCTCCAGGGCTGGGGCTGGACGGATGTaGAGCGGAGGAGTCACAAAGCTGGAAATGCACGCAGCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: RGSKGVSSRAGAGRM*SGGVTKLEMHAARC Trigger: GCATCTGGCTGCGTGCATTTCCAGCTTTGTGACTCCTCCGCTCCACATCCGTCCAGCCCCAGCCCTGGAGGACACACCCTTACTGCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS GCA 90 bp | ACTTTGACCTGGATTTCAGCCCCCACGAATGAAATGGACGCCACTTaGCGAGACCAGCTCAACTGGGGAGACCCTAACCCAGCAGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLTWISAPTNEMDAT*RDQLNWGDPNPAAR Trigger: CCTCGCTGCTGGGTTAGGGTCTCCCCAGTTGAGCTGGTCTCGGCAAGTGGCGTCCATTTCATTCGTGGGGGCTGAAATCCAGGTCAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 90 bp | GCCCCCACGAATGAAATGGACGCCACTTGCCGAGACCAGCTCAACTaGGGAGACCCTAACCCAGCAGCGAGGCAGTGGTCAGAATTGAAT | + |
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Preference number: 5 (lower is better) Translates to: APTNEMDATCRDQLN*GDPNPAARQWSELN Trigger: ATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTCCCCAGTTGAGCTGGTCTCGGCAAGTGGCGTCCATTTCATTCGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 90 bp | TCAACTGGGGAGACCCTAACCCAGCAGCGAGGCAGTGGTCAGAATTaGATCACTTTGCTCCAGATTCCCGACTGCAGTACTTGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: STGETLTQQRGSGQN*ITLLQIPDCSTWQL Trigger: CAGCTGCCAAGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTCCCCAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | ATCCTGCCAGTTGCAGGCATTCCTGCTCAGTCAATTGAGGTCAGTTaGTTTCCATCAGAGGCGAGTCTGGCCATCAGGTCTCCAGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: ILPVAGIPAQSIEVS*FPSEASLAIRSPGS Trigger: ACTTCCTGGAGACCTGATGGCCAGACTCGCCTCTGATGGAAAGCAACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS TCA 90 bp | TTCCATCAGAGGCGAGTCTGGCCATCAGGTCTCCAGGAAGTCGTGTaGAATCAACAACAGAAGACAGAAGGTACGCTGGTGGCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FHQRRVWPSGLQEVV*NQQQKTEGTLVASV Trigger: CACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACACGACTTCCTGGAGACCTGATGGCCAGACTCGCCTCTGATGGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS TCA 90 bp | CACATGTTCTATCCTGCCAGTTGCAGGCATTCCTGCTCAGTCAATTaGGGTCAGTTGCTTTCCATCAGAGGCGAGTCTGGCCATCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: HMFYPASCRHSCSVN*GQLLSIRGESGHQV Trigger: GACCTGATGGCCAGACTCGCCTCTGATGGAAAGCAACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS GCA 90 bp | GTCAAGAGGGAGCCCATTCAATGGGTGGGGGACAAGGATTTTATTTaGAACTCACAGGTCTTCCTGTCTTCCGTGGTCCACAGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VKREPIQWVGDKDFI*NSQVFLSSVVHSPE Trigger: CTCTGGACTGTGGACCACGGAAGACAGGAAGACCTGTGAGTTGCAAATAAAATCCTTGTCCCCCACCCATTGAATGGGCTCCCTCTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669187.1 |
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| CDS GCA 90 bp | ACATATGCGGAAGATGTGCTCAGCGTTGGGCCACATGTTCTATCCTaGCAGTTGCAGGCATTCCTGCTCAGTCAATTGAGGTCAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TYAEDVLSVGPHVLS*QLQAFLLSQLRSVA Trigger: AGCAACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS GCA 90 bp | CAGCATTATTCACAAGCCACATGCAGAGGACATATGCGGAAGATGTaGTCAGCGTTGGGCCACATGTTCTATCCTGCCAGTTGCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: QHYSQATCRGHMRKM*SALGHMFYPASCRH Trigger: ATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGAATAATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CCA 90 bp | CAGCTAGTTTTCCATTCCAACCATCACTCTGGTGACACTTTGACCTaGATTTCAGCCCCCACGAATGAAATGGACGCCACTTGCCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: QLVFHSNHHSGDTLT*ISAPTNEMDATCRD Trigger: GTCTCGGCAAGTGGCGTCCATTTCATTCGTGGGGGCTGAAATCCAGGTCAAAGTGTCACCAGAGTGATGGTTGGAATGGAAAACTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | CAGATCCCAAACAGCATTATTCACAAGCCACATGCAGAGGACATATaGGGAAGATGTGCTCAGCGTTGGGCCACATGTTCTATCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QIPNSIIHKPHAEDI*GRCAQRWATCSILP Trigger: TGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGAATAATGCTGTTTGGGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS GCA 90 bp | TCAAGCCATTGCTGTGGCTGTTCACAATCCCATGCTGAGGTAGCATaGCTCTATGTGGGTTCCTCAGGTCTTTATCCTGAGATAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SSHCCGCSQSHAEVA*LYVGSSGLYPEIEF Trigger: GAACTCTATCTCAGGATAAAGACCTGAGGAACCCACATAGAGGCATGCTACCTCAGCATGGGATTGTGAACAGCCACAGCAATGGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 |
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| CDS GCA 90 bp | CCTTCCAGCTTGGGCGTTAGGGCCATTATGAATATGTTACAGTGCTaGAGAGATTTTGTTTATGGCCAGTTTGGGGGCCAGTTTATGGCC | + |
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Preference number: 5 (lower is better) Translates to: PSSLGVRAIMNMLQC*RDFVYGQFGGQFMA Trigger: GGCCATAAACTGGCCCCCAAACTGGCCATAAACAAAATCTCTGCAGCACTGTAACATATTCATAATGGCCCTAACGCCCAAGCTGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 90 bp | GCTGAGGCCAGCAATGTACATCTTGTGACCCTCAGGTCTTTATCCTaGGATAGAGTTCTTAAAATCCTTGCAGTAGGGGTGCTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AEASNVHLVTLRSLS*DRVLKILAVGVLEE Trigger: TTCCTCCAGCACCCCTACTGCAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGGTCACAAGATGTACATTGCTGGCCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426205.2 ENST00000458615.5 |
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| CDS GCA 90 bp | ATAAGGAGGGGGTGCAGAAGGGTAGGAATGAACCTCTCCTTCCTTTaGTGCTTTAGCTTGAGCTGGCAAAGAAACATGCTATGTAACCTC | + |
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Preference number: 5 (lower is better) Translates to: IRRGCRRVGMNLSFL*CFSLSWQRNMLCNL Trigger: GAGGTTACATAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCATTCCTACCCTTCTGCACCCCCTCCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | CGACCTTCCAGCTTGGGCGTTAGGGCCATTATGAATATGTTACAGTaGTGCAGAGATTTTGTTTATGGCCAGTTTGGGGGCCAGTTTATG | + |
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Preference number: 5 (lower is better) Translates to: RPSSLGVRAIMNMLQ*CRDFVYGQFGGQFM Trigger: CATAAACTGGCCCCCAAACTGGCCATAAACAAAATCTCTGCAGCACTGTAACATATTCATAATGGCCCTAACGCCCAAGCTGGAAGGTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | CCAGTAAATAGATCAGATCCCAAACAGCATTATTCACAAGCCACATaGAGAGGACATATGCGGAAGATGTGCTCAGCGTTGGGCCACATG | + |
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Preference number: 5 (lower is better) Translates to: PVNRSDPKQHYSQAT*RGHMRKMCSALGHM Trigger: CATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGAATAATGCTGTTTGGGATCTGATCTATTTACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CCA 90 bp | GTTTCTATGGGATCCCTTTGGTCAAGAGGGAGCCCATTCAATGGGTaGGGGACAAGGATTTTATTTGCAACTCACAGGTCTTCCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: VSMGSLWSRGSPFNG*GTRILFATHRSSCL Trigger: AAGACAGGAAGACCTGTGAGTTGCAAATAAAATCCTTGTCCCCCACCCATTGAATGGGCTCCCTCTTGACCAAAGGGATCCCATAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669187.1 |
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| CDS TCA 90 bp | ACATCTTGTGACCTGAAGGCCAGCAGCTTCTTTCCAGCTGTTGGCTaGGTCATTTTTACATGCCATGTCCAGGCCATTCAGATATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: TSCDLKASSFFPAVG*VIFTCHVQAIQISL Trigger: AAGAGATATCTGAATGGCCTGGACATGGCATGTAAAAATGACTCAGCCAACAGCTGGAAAGAAGCTGCTGGCCTTCAGGTCACAAGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000654826.1 ENST00000660245.1 ENST00000661025.1 ENST00000666668.1 ENST00000669718.1 |
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| CDS GCA 90 bp | CAAATCTGTTGTTCTGTTTCTGTCTTTGCAGCTGGTTTCTGTCAATaGTGTTCAGCTGCTGATAACATCTGGCCTCTGGGCAGCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: QICCSVSVFAAGFCQ*CSAADNIWPLGSLK Trigger: TTTGAGGCTGCCCAGAGGCCAGATGTTATCAGCAGCTGAACAGCATTGACAGAAACCAGCTGCAAAGACAGAAACAGAACAACAGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 90 bp | CATTCAGATATCTCTTCGTCTTCCTTGGGCCTCAGGTCTTTATCCTaGGATAGAGTTCTTAAAATCCTTGCAGTAGGGGTGCTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HSDISSSSLGLRSLS*DRVLKILAVGVLEE Trigger: TTCCTCCAGCACCCCTACTGCAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGCCCAAGGAAGACGAAGAGATATCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654826.1 ENST00000660245.1 ENST00000669718.1 |
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| CDS GCA 90 bp | CACATATGGCACAATCAGGAGCTGTGCTATGTGCTCTCCTGGCTCTaGTTTCCAGGGAACAGAAGTAGATATAACAATTTGAATTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: HIWHNQELCYVLSWL*FPGNRSRYNNLNFP Trigger: GGGGAAATTCAAATTGTTATATCTACTTCTGTTCCCTGGAAAGCAGAGCCAGGAGAGCACATAGCACAGCTCCTGATTGTGCCATATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 90 bp | AATAGAACTAAGAACCATTGCTCGAGGTGCTGCTCAAACAGTCACTaGGGCAATTACTTTTCGCCCAGTGTCCTCTGGAAAAGAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: NRTKNHCSRCCSNSH*GNYFSPSVLWKRKI Trigger: GATCTTTCTTTTCCAGAGGACACTGGGCGAAAAGTAATTGCCCCAGTGACTGTTTGAGCAGCACCTCGAGCAATGGTTCTTAGTTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 90 bp | TCTTTGATTTGCAAAGAGATAAAAGCAAGGGCAGCTTTGTCATGGTaGGCTACTTCTCGCAGGAGTCAGAATCCGCATCTGCAGACTATA | + |
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Preference number: 5 (lower is better) Translates to: SLICKEIKARAALSW*ATSRRSQNPHLQTI Trigger: TATAGTCTGCAGATGCGGATTCTGACTCCTGCGAGAAGTAGCTCACCATGACAAAGCTGCCCTTGCTTTTATCTCTTTGCAAATCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | AAGGTCTGGTGTAATTTTCCAGCAATAAGTCCCAGGAGAAAGCCTTaGCCAAGATTTAGCCATTGGAGCAATTGCTTACTCAAGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KVWCNFPAISPRRKP*PRFSHWSNCLLKVL Trigger: CAAGACCTTGAGTAAGCAATTGCTCCAATGGCTAAATCTTGGGCAAGGCTTTCTCCTGGGACTTATTGCTGGAAAATTACACCAGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654951.1 ENST00000669611.1 |
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| CDS CCA 90 bp | TTTACATGCCATGTCCAGGCCATTCAGATATCTCTTCGTCTTCCTTaGGCCTCAGGTCTTTATCCTGAGATAGAGTTCTTAAAATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: FTCHVQAIQISLRLP*ASGLYPEIEFLKSL Trigger: CAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGCCCAAGGAAGACGAAGAGATATCTGAATGGCCTGGACATGGCATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654826.1 ENST00000660245.1 ENST00000669718.1 |
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| CDS CCA 90 bp | TCCAGGAAGTCGTGTGAAATCAACAACAGAAGACAGAAGGTACGCTaGTGGCATCTGTGGGTTCTAATGTGCAAAACTCTAAAATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: SRKSCEINNRRQKVR*WHLWVLMCKTLKSK Trigger: TTTGGATTTTAGAGTTTTGCACATTAGAACCCACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACACGACTTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CCA 90 bp | AGGGTAGGAATGAACCTCTCCTTCCTTTGCTGCTTTAGCTTGAGCTaGCAAAGAAACATGCTATGTAACCTCTTCTATTACTTTGCTATA | + |
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Preference number: 5 (lower is better) Translates to: RVGMNLSFLCCFSLS*QRNMLCNLFYYFAI Trigger: TATAGCAAAGTAATAGAAGAGGTTACATAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCATTCCTACCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 90 bp | TGTGAAATCAACAACAGAAGACAGAAGGTACGCTGGTGGCATCTGTaGGTTCTAATGTGCAAAACTCTAAAATCCAAATATCTGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CEINNRRQKVRWWHL*VLMCKTLKSKYLEV Trigger: GACTTCCAGATATTTGGATTTTAGAGTTTTGCACATTAGAACCCACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CCA 90 bp | AGGAAGTCGTGTGAAATCAACAACAGAAGACAGAAGGTACGCTGGTaGCATCTGTGGGTTCTAATGTGCAAAACTCTAAAATCCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: RKSCEINNRRQKVRW*HLWVLMCKTLKSKY Trigger: ATATTTGGATTTTAGAGTTTTGCACATTAGAACCCACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACACGACTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS TCA 90 bp | CAGATAATAGGAACTTTTGCTGTACTTCTTATCATTTCTACCATCTaGCCGTTTTGTTCAGATCATCTGAACATAGTGTGGCCGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: QIIGTFAVLLIISTI*PFCSDHLNIVWPWH Trigger: ATGCCACGGCCACACTATGTTCAGATGATCTGAACAAAACGGTCAGATGGTAGAAATGATAAGAAGTACAGCAAAAGTTCCTATTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 90 bp | TGGTCAGATTACAGTTTGGTTTTATACATTTCAGGGAAGCAGGAGTaGCGTAAGTCAGTATGTAGAATGTATACATTGGCTCGGCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: WSDYSLVLYISGKQE*RKSVCRMYTLARPK Trigger: TTTAGGCCGAGCCAATGTATACATTCTACATACTGACTTACGTCACTCCTGCTTCCCTGAAATGTATAAAACCAAACTGTAATCTGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669187.1 |
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| CDS GCA 90 bp | GGACCAATTAATAATGATTCCATAGGAATTGTTGTGCAGCACCTCTaGCTGTTCTGCAGTGCAATCTTCCTAAACAAGTACGTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: GPINNDSIGIVVQHL*LFCSAIFLNKYVHF Trigger: AAAATGAACGTACTTGTTTAGGAAGATTGCACTGCAGAACAGGCAGAGGTGCTGCACAACAATTCCTATGGAATCATTATTAATTGGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 90 bp | GAGTCAGCTAAATGGGTTTGCCAAGTAAGACTATTTATAAAAGCTTaGTGTATTTATGCCTTCATGAGAGGGACAATAATTTTTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ESAKWVCQVRLFIKA*CIYAFMRGTIIFPG Trigger: TCCTGGAAAAATTATTGTCCCTCTCATGAAGGCATAAATACAGCAAGCTTTTATAAATAGTCTTACTTGGCAAACCCATTTAGCTGACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 90 bp | TGTAGCTTTAAGCCAGGGCCAAGACAATCAAATTTACGTACCAATTaGCATTATGAGAAAGCAGCAAATAAAAGGTTTTCAACTACTGAA | + |
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Preference number: 5 (lower is better) Translates to: CSFKPGPRQSNLRTN*HYEKAANKRFSTTE Trigger: TTCAGTAGTTGAAAACCTTTTATTTGCTGCTTTCTCATAATGCCAATTGGTACGTAAATTTGATTGTCTTGGCCCTGGCTTAAAGCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668540.1 |
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| CDS GCA 90 bp | ATGGGTTTGCCAAGTAAGACTATTTATAAAAGCTTGCTGTATTTATaGCTTCATGAGAGGGACAATAATTTTTCCAGGATCATATCCATG | + |
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Preference number: 5 (lower is better) Translates to: MGLPSKTIYKSLLYL*LHERDNNFSRIISM Trigger: CATGGATATGATCCTGGAAAAATTATTGTCCCTCTCATGAAGGCATAAATACAGCAAGCTTTTATAAATAGTCTTACTTGGCAAACCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 72 bp | TGGATTTCAGCCCCCACGAATGAAATGGACGCCACTTaGCGAGACCAGCTCAACTGGGGAGACCCTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: WISAPTNEMDAT*RDQLNWGDPNP Trigger: TGGGTTAGGGTCTCCCCAGTTGAGCTGGTCTCGGCAAGTGGCGTCCATTTCATTCGTGGGGGCTGAAATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | CCCAGGTGGGTGGCTGTGTTAAACGGGTGTTGCTCATaGCAGTTGGGGTTCTCCTCAGCGTCAGTCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: PRWVAVLNGCCS*QLGFSSASVLT Trigger: TGTCAAGACTGACGCTGAGGAGAACCCCAACTGTCATGAGCAACACCCGTTTAACACAGCCACCCACCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 72 bp | GACGGATGTGGAGCGGAGGAGTCACAAAGCTGGAAATaGACGCAGCCAGATGCCTCAGGTCTTTATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: DGCGAEESQSWK*TQPDASGLYPE Trigger: CTCAGGATAAAGACCTGAGGCATCTGGCTGCGTGCATTTCCAGCTTTGTGACTCCTCCGCTCCACATCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CAA 72 bp | GGGTTCTCCTCAGCGTCAGTCTTGACATGGCTGTTATaGAGGGGTCCTCGGGGTCCTCTCAGAGTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GFSSASVLTWLL*RGPRGPLRVSS Trigger: AGAAGAGACTCTGAGAGGACCCCGAGGACCCCTCAATAACAGCCATGTCAAGACTGACGCTGAGGAGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | CTCAACTGGGGAGACCCTAACCCAGCAGCGAGGCAGTGGTCAGAATaGAATCACTTTGCTCCAGATTCCCGACTGCAGTACTTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LNWGDPNPAARQWSE*NHFAPDSRLQYLAA Trigger: AGCTGCCAAGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTCCCCAGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 72 bp | CTCAACTGGGGAGACCCTAACCCAGCAGCGAGGCAGTaGTCAGAATTGAATCACTTTGCTCCAGATTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: LNWGDPNPAARQ*SELNHFAPDSR Trigger: TCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTCCCCAGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | GGAGACCCTAACCCAGCAGCGAGGCAGTGGTCAGAATaGAATCACTTTGCTCCAGATTCCCGACTGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: GDPNPAARQWSE*NHFAPDSRLQY Trigger: GTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | TCACAAGCCACATGCAGAGGACATATGCGGAAGATGTGCTCAGCGTaGGGCCACATGTTCTATCCTGCCAGTTGCAGGCATTCCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SQATCRGHMRKMCSA*GHMFYPASCRHSCS Trigger: TGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS TCA 72 bp | GAGACCCTAACCCAGCAGCGAGGCAGTGGTCAGAATTaGATCACTTTGCTCCAGATTCCCGACTGCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: ETLTQQRGSGQN*ITLLQIPDCST Trigger: AGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTCGCTGCTGGGTTAGGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | AGGCGAGTCTGGCCATCAGGTCTCCAGGAAGTCGTGTaGAATCAACAACAGAAGACAGAAGGTACGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRVWPSGLQEVV*NQQQKTEGTLV Trigger: CACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACACGACTTCCTGGAGACCTGATGGCCAGACTCGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS TCA 72 bp | TATCCTGCCAGTTGCAGGCATTCCTGCTCAGTCAATTaGGGTCAGTTGCTTTCCATCAGAGGCGAGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPASCRHSCSVN*GQLLSIRGESG Trigger: GCCAGACTCGCCTCTGATGGAAAGCAACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS GCA 72 bp | GAAGATGTGCTCAGCGTTGGGCCACATGTTCTATCCTaGCAGTTGCAGGCATTCCTGCTCAGTCAATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDVLSVGPHVLS*QLQAFLLSQLR Trigger: CCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS GCA 72 bp | TCACAAGCCACATGCAGAGGACATATGCGGAAGATGTaGTCAGCGTTGGGCCACATGTTCTATCCTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQATCRGHMRKM*SALGHMFYPAS Trigger: ACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS CAA 72 bp | GTGCTCAGCGTTGGGCCACATGTTCTATCCTGCCAGTaGCAGGCATTCCTGCTCAGTCAATTGAGGTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLSVGPHVLSCQ*QAFLLSQLRSV Trigger: AACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS CAA 90 bp | GGTCAAGAGGGAGCCCATTCAATGGGTGGGGGACAAGGATTTTATTaGCAACTCACAGGTCTTCCTGTCTTCCGTGGTCCACAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQEGAHSMGGGQGFY*QLTGLPVFRGPQSR Trigger: TCTGGACTGTGGACCACGGAAGACAGGAAGACCTGTGAGTTGCAAATAAAATCCTTGTCCCCCACCCATTGAATGGGCTCCCTCTTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CAA 90 bp | GCGGAAGATGTGCTCAGCGTTGGGCCACATGTTCTATCCTGCCAGTaGCAGGCATTCCTGCTCAGTCAATTGAGGTCAGTTGCTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AEDVLSVGPHVLSCQ*QAFLLSQLRSVAFH Trigger: ATGGAAAGCAACTGACCTCAATTGACTGAGCAGGAATGCCTGCAACTGGCAGGATAGAACATGTGGCCCAACGCTGAGCACATCTTCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS CAA 90 bp | GTCCTCCAGCTAGTTTTCCATTCCAACCATCACTCTGGTGACACTTaGACCTGGATTTCAGCCCCCACGAATGAAATGGACGCCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLQLVFHSNHHSGDT*TWISAPTNEMDATC Trigger: GCAAGTGGCGTCCATTTCATTCGTGGGGGCTGAAATCCAGGTCAAAGTGTCACCAGAGTGATGGTTGGAATGGAAAACTAGCTGGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | TGCTGTGGCTGTTCACAATCCCATGCTGAGGTAGCATaGCTCTATGTGGGTTCCTCAGGTCTTTATCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CCGCSQSHAEVA*LYVGSSGLYPE Trigger: CTCAGGATAAAGACCTGAGGAACCCACATAGAGGCATGCTACCTCAGCATGGGATTGTGAACAGCCACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 |
||
| CDS GCA 72 bp | TTTTCCCATTCCCACATATGGCACAATCAGGAGCTGTaGTATGTGCTCTCCTGGCTCTGCTTTCCAGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSHSHIWHNQEL*YVLSWLCFPGN Trigger: GTTCCCTGGAAAGCAGAGCCAGGAGAGCACATAGCACAGCTCCTGATTGTGCCATATGTGGGAATGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | TGTGGCTTAAGAATGCCTTTAAGCGGTTTTCCACCCTaGGTGGGACAGGTGTTCCTTGCCCTCATTCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: CGLRMPLSGFPP*VGQVFLALIPI Trigger: TATGGGAATGAGGGCAAGGAACACCTGTCCCACTCAGGGTGGAAAACCGCTTAAAGGCATTCTTAAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | TTACTCCCTCAGGCAGTGGTCAGAATTGAATCACTTTaGTCCAGATTCCCGACTGCAGTACTTGGCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLPQAVVRIESL*SRFPTAVLGSC Trigger: ACAGCTGCCAAGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTGAGGGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CCA 72 bp | TTCCATTCCAACCATCACTCTGGTGACACTTTGACCTaGATTTCAGCCCCCACGAATGAAATGGACGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FHSNHHSGDTLT*ISAPTNEMDAT Trigger: AGTGGCGTCCATTTCATTCGTGGGGGCTGAAATCCAGGTCAAAGTGTCACCAGAGTGATGGTTGGAATGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | AAGAACCATTGCTCGAGGTGCTGCTCAAACAGTCACTaGGGCAATTACTTTTCGCCCAGTGTCCTCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KNHCSRCCSNSH*GNYFSPSVLWK Trigger: TTTCCAGAGGACACTGGGCGAAAAGTAATTGCCCCAGTGACTGTTTGAGCAGCACCTCGAGCAATGGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | TTAGCCAGACTGATGGCCTGCAGGCAGGACTTACCCTaGTCTGGCATCACCTTACATCTTGGTTATAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LARLMACRQDLP*SGITLHLGYNL Trigger: CAGATTATAACCAAGATGTAAGGTGATGCCAGACCAGGGTAAGTCCTGCCTGCAGGCCATCAGTCTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CAA 72 bp | AAAAAGTTCCAAGGCAGAATGAACCAGATCCCACACTaGTCCCATTGTTACCCTGATGCTTCCGAGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KKFQGRMNQIPH*SHCYPDASELP Trigger: GGGGAGCTCGGAAGCATCAGGGTAACAATGGGACAAGTGTGGGATCTGGTTCATTCTGCCTTGGAACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 72 bp | GTTCAATTGCTTGCCCCACATACGTCTGGCAAATTGTaGGGCTGTTTGACATGCCCTGTGGCAACACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VQLLAPHTSGKL*GCLTCPVATLS Trigger: GGAAAGTGTTGCCACAGGGCATGTCAAACAGCCCAACAATTTGCCAGACGTATGTGGGGCAAGCAATTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 72 bp | CTTGCCCTCATTCCCATAAACCCACGACCTTCCAGCTaGGGCGTTAGGGCCATTATGAATATGTTACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LALIPINPRPSS*GVRAIMNMLQC Trigger: GCACTGTAACATATTCATAATGGCCCTAACGCCCAAGCTGGAAGGTCGTGGGTTTATGGGAATGAGGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | TTGCCCCACATACGTCTGGCAAATTGTTGGGCTGTTTaGCATGCCCTGTGGCAACACTTTCCAATGATAACG | + |
|
Preference number: 6 (lower is better) Translates to: LPHIRLANCWAV*HALWQHFPMIT Trigger: CGTTATCATTGGAAAGTGTTGCCACAGGGCATGTCAAACAGCCCAACAATTTGCCAGACGTATGTGGGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | TGCAAAGAGATAAAAGCAAGGGCAGCTTTGTCATGGTaGGCTACTTCTCGCAGGAGTCAGAATCCGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: CKEIKARAALSW*ATSRRSQNPHL Trigger: CAGATGCGGATTCTGACTCCTGCGAGAAGTAGCTCACCATGACAAAGCTGCCCTTGCTTTTATCTCTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | GGGTGCAGAAGGGTAGGAATGAACCTCTCCTTCCTTTaGTGCTTTAGCTTGAGCTGGCAAAGAAACATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GCRRVGMNLSFL*CFSLSWQRNML Trigger: TAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCATTCCTACCCTTCTGCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | TGCCTGAATAGAACTAAGAACCATTGCTCGAGGTGCTaGTCAAACAGTCACTGGGGCAATTACTTTTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLNRTKNHCSRC*SNSHWGNYFSP Trigger: GGGCGAAAAGTAATTGCCCCAGTGACTGTTTGAGCAGCACCTCGAGCAATGGTTCTTAGTTCTATTCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | AACAGCATTATTCACAAGCCACATGCAGAGGACATATaGGGAAGATGTGCTCAGCGTTGGGCCACATGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSIIHKPHAEDI*GRCAQRWATCS Trigger: AGAACATGTGGCCCAACGCTGAGCACATCTTCCGCATATGTCCTCTGCATGTGGCTTGTGAATAATGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS CCA 72 bp | TATGGGATCCCTTTGGTCAAGAGGGAGCCCATTCAATaGGTGGGGGACAAGGATTTTATTTGCAACTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YGIPLVKREPIQ*VGDKDFICNSQ Trigger: CTGTGAGTTGCAAATAAAATCCTTGTCCCCCACCCATTGAATGGGCTCCCTCTTGACCAAAGGGATCCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CAA 72 bp | CTTGCCCCACATACGTCTGGCAAATTGTTGGGCTGTTaGACATGCCCTGTGGCAACACTTTCCAATGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LAPHTSGKLLGC*TCPVATLSNDN Trigger: GTTATCATTGGAAAGTGTTGCCACAGGGCATGTCAAACAGCCCAACAATTTGCCAGACGTATGTGGGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 72 bp | TTCCTCAGGTTTTCTTCCACCATCTTTGACAGCTTCTaGATTTGTCCCCAGGTGGGTGGCTGTGTTAAACGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRFSSTIFDSF*ICPQVGGCVKR Trigger: CCGTTTAACACAGCCACCCACCTGGGGACAAATCAAGAAGCTGTCAAAGATGGTGGAAGAAAACCTGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 90 bp | TCAGGGGTCTCACAGCCTCCAGAGCTGAGACCCGTGAACAGAGATTaGCCCACATATTTATTAACAGCAAACCAGTCATTAGCATTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVSQPPELRPVNRD*PTYLLTANQSLALF Trigger: GAACAATGCTAATGACTGGTTTGCTGTTAATAAATATGTGGGCAAATCTCTGTTCACGGGTCTCAGCTCTGGAGGCTGTGAGACCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | CATGCCAGCCGATGCACTTCATCATTCTTACATCTTTaGTTAGGTAGGAATGGGCACCTGACCCTGGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HASRCTSSFLHL*LGRNGHLTLGK Trigger: TTTTCCCAGGGTCAGGTGCCCATTCCTACCTAATCAAAGATGTAAGAATGATGAAGTGCATCGGCTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654826.1 |
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| CDS TCA 72 bp | GCTGGAATGCCCATCACCGCAAAGCACTGTAAAAGATaGTGTTTAACACAGGCAGAAGACTCTCCTGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGMPITAKHCKR*CLTQAEDSPVW Trigger: CCAAACAGGAGAGTCTTCTGCCTGTGTTAAACATCATCTTTTACAGTGCTTTGCGGTGATGGGCATTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | GAAATGCACGCAGCCAGATGCCTCAGGTCTTTATCCTaGGATAGAGTTCTTAAAATCCTTGCAGTAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EMHAARCLRSLS*DRVLKILAVGV Trigger: CACCCCTACTGCAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGCATCTGGCTGCGTGCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS GCA 72 bp | ATTTACTCACAGGCAGTGGTCAGAATTGAATCACTTTaGTCCAGATTCCCGACTGCAGTACTTGGCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IYSQAVVRIESL*SRFPTAVLGSC Trigger: ACAGCTGCCAAGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCACTGCCTGTGAGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000426205.2 ENST00000458615.5 ENST00000654826.1 ENST00000654951.1 ENST00000660245.1 ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 ENST00000668540.1 ENST00000669611.1 ENST00000669718.1 |
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| CDS GCA 72 bp | TCCTGCCTGAATAGAACTAAGAACCATTGCTCGAGGTaGTGCTCAAACAGTCACTGGGGCAATTACTTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SCLNRTKNHCSR*CSNSHWGNYFS Trigger: CGAAAAGTAATTGCCCCAGTGACTGTTTGAGCAGCACCTCGAGCAATGGTTCTTAGTTCTATTCAGGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | AGGCTCAAATGTAGCTGTAATATTTCCCTGTTGATCTaGGGGGTGTATTCTAACAGGGAACTGCCAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLKCSCNISLLI*GVYSNRELPSL Trigger: GAGGCTTGGCAGTTCCCTGTTAGAATACACCCCCCAGATCAACAGGGAAATATTACAGCTACATTTGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | ATATGGCACAATCAGGAGCTGTGCTATGTGCTCTCCTaGCTCTGCTTTCCAGGGAACAGAAGTAGATATAAC | + |
|
Preference number: 6 (lower is better) Translates to: IWHNQELCYVLS*LCFPGNRSRYN Trigger: GTTATATCTACTTCTGTTCCCTGGAAAGCAGAGCCAGGAGAGCACATAGCACAGCTCCTGATTGTGCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | TCCCATCATGGCTGGGAACTCATTTTAAGGTTTCTATaGGATCCCTTTGGTCAAGAGGGAGCCCATTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SHHGWELILRFL*DPFGQEGAHSM Trigger: CATTGAATGGGCTCCCTCTTGACCAAAGGGATCCCATAGAAACCTTAAAATGAGTTCCCAGCCATGATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CAA 72 bp | CTAGTTTTCCATTCCAACCATCACTCTGGTGACACTTaGACCTGGATTTCAGCCCCCACGAATGAAATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVFHSNHHSGDT*TWISAPTNEMD Trigger: GTCCATTTCATTCGTGGGGGCTGAAATCCAGGTCAAAGTGTCACCAGAGTGATGGTTGGAATGGAAAACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 90 bp | TGGTCAGAATTGAATCACTTTGCTCCAGATTCCCGACTGCAGTACTaGGCAGCTGTTATTAAGAGCCTCATGTCCTTTCCTCATGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WSELNHFAPDSRLQY*AAVIKSLMSFPHVF Trigger: GAAGACATGAGGAAAGGACATGAGGCTCTTAATAACAGCTGCCAAGTACTGCAGTCGGGAATCTGGAGCAAAGTGATTCAATTCTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000426205.2 ENST00000458615.5 ENST00000654826.1 ENST00000654951.1 ENST00000659445.1 ENST00000660245.1 ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 ENST00000668540.1 ENST00000669187.1 ENST00000669611.1 ENST00000669718.1 |
||
| CDS CAA 90 bp | TATGAGTACGTTCAATTGCTTGCCCCACATACGTCTGGCAAATTGTaGGGCTGTTTGACATGCCCTGTGGCAACACTTTCCAATGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: YEYVQLLAPHTSGKL*GCLTCPVATLSNDN Trigger: GTTATCATTGGAAAGTGTTGCCACAGGGCATGTCAAACAGCCCAACAATTTGCCAGACGTATGTGGGGCAAGCAATTGAACGTACTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | GGGAAAATCCAGCTGAGGCCAGCAATGTACATCTTGTaGCCCTCAGGTCTTTATCCTGAGATAGAGTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GKIQLRPAMYIL*PSGLYPEIEFL Trigger: TAAGAACTCTATCTCAGGATAAAGACCTGAGGGTCACAAGATGTACATTGCTGGCCTCAGCTGGATTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426205.2 ENST00000458615.5 ENST00000669187.1 |
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| CDS TCA 72 bp | ATCTCTTCGTCTTCCTTGGGCCTCAGGTCTTTATCCTaGGATAGAGTTCTTAAAATCCTTGCAGTAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISSSSLGLRSLS*DRVLKILAVGV Trigger: CACCCCTACTGCAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGCCCAAGGAAGACGAAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654826.1 ENST00000660245.1 ENST00000669718.1 |
||
| CDS TCA 72 bp | AGCATGCCTCTATGTGGGTTCCTCAGGTCTTTATCCTaGGATAGAGTTCTTAAAATCCTTGCAGTAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SMPLCGFLRSLS*DRVLKILAVGV Trigger: CACCCCTACTGCAAGGATTTTAAGAACTCTATCTCAGGATAAAGACCTGAGGAACCCACATAGAGGCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000666100.1 ENST00000666668.1 |
||
| CDS TCA 72 bp | GGCAGAAGACTCTCCTGTTTGGCATGTAGCCCAAAGTaGGAAAAGGTGTCCACACTACATGTACATAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GRRLSCLACSPK*EKVSTLHVHKL Trigger: TAGCTTATGTACATGTAGTGTGGACACCTTTTCTCACTTTGGGCTACATGCCAAACAGGAGAGTCTTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | TTTGGCATCTGGCTCATGATAAGGTTTCAGGTGTCTTaGTGGTATCCAAATCGGCTGTTGATTTTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FGIWLMIRFQVS*WYPNRLLILAW Trigger: CCAGGCCAAAATCAACAGCCGATTTGGATACCATCAAGACACCTGAAACCTTATCATGAGCCAGATGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS TCA 72 bp | ACCCACGACCTTCCAGCTTGGGCGTTAGGGCCATTATaGATATGTTACAGTGCTGCAGAGATTTTGTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: THDLPAWALGPL*ICYSAAEILFM Trigger: CATAAACAAAATCTCTGCAGCACTGTAACATATTCATAATGGCCCTAACGCCCAAGCTGGAAGGTCGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS GCA 72 bp | TGCAGAAGGGTAGGAATGAACCTCTCCTTCCTTTGCTaGTTTAGCTTGAGCTGGCAAAGAAACATGCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: CRRVGMNLSFLC*FSLSWQRNMLC Trigger: ACATAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCATTCCTACCCTTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CCA 72 bp | CATGTCCAGGCCATTCAGATATCTCTTCGTCTTCCTTaGGCCTCAGGTCTTTATCCTGAGATAGAGTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: HVQAIQISLRLP*ASGLYPEIEFL Trigger: TAAGAACTCTATCTCAGGATAAAGACCTGAGGCCCAAGGAAGACGAAGAGATATCTGAATGGCCTGGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654826.1 ENST00000660245.1 ENST00000669718.1 |
||
| CDS CCA 72 bp | GTTATAATGAGCTGTATCCAACCTCCCTTCCCATCATaGCTGGGAACTCATTTTAAGGTTTCTATGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: VIMSCIQPPFPS*LGTHFKVSMGS Trigger: GGATCCCATAGAAACCTTAAAATGAGTTCCCAGCCATGATGGGAAGGGAGGTTGGATACAGCTCATTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669187.1 |
||
| CDS CCA 72 bp | TCGTGTGAAATCAACAACAGAAGACAGAAGGTACGCTaGTGGCATCTGTGGGTTCTAATGTGCAAAACTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SCEINNRRQKVR*WHLWVLMCKTL Trigger: TAGAGTTTTGCACATTAGAACCCACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTTGATTTCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669611.1 |
||
| CDS GCA 72 bp | TCCATAGGAATTGTTGTGCAGCACCTCTGCCTGTTCTaGAGTGCAATCTTCCTAAACAAGTACGTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SIGIVVQHLCLF*SAIFLNKYVHF Trigger: AAAATGAACGTACTTGTTTAGGAAGATTGCACTGCAGAACAGGCAGAGGTGCTGCACAACAATTCCTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 72 bp | TACTTCAGCAACTTTACCAACTCCAACTATGTTAAATaGAGTGGGTTGAATTGGCCACGTAGACAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: YFSNFTNSNYVK*SGLNWPRRQPV Trigger: CACTGGCTGTCTACGTGGCCAATTCAACCCACTCAATTTAACATAGTTGGAGTTGGTAAAGTTGCTGAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
||
| CDS CAA 72 bp | TACTGCAGGAATAGTAAATGCAAACCATTCACAGTCTaGCTCAGCCAAGGGGATAGTAAGGAAACAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCRNSKCKPFTV*LSQGDSKETVL Trigger: AAGGACTGTTTCCTTACTATCCCCTTGGCTGAGCAAGACTGTGAATGGTTTGCATTTACTATTCCTGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | TGCTGTACTTCTTATCATTTCTACCATCTGACCGTTTaGTTCAGATCATCTGAACATAGTGTGGCCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: CCTSYHFYHLTV*FRSSEHSVAVA Trigger: TGCCACGGCCACACTATGTTCAGATGATCTGAACAAAACGGTCAGATGGTAGAAATGATAAGAAGTACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | CATGTCCTTTCCTCATGTCTTCCCACAACTCAGTTCTTTTTCTTATaGTTCTCTGCATGCCAGCCGATGCACTTCATCATTCTTACATCT | + |
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Preference number: 6 (lower is better) Translates to: HVLSSCLPTTQFFFL*FSACQPMHFIILTS Trigger: AGATGTAAGAATGATGAAGTGCATCGGCTGGCATGCAGAGAACAATAAGAAAAAGAACTGAGTTGTGGGAAGACATGAGGAAAGGACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000426205.2 ENST00000458615.5 ENST00000654826.1 ENST00000654951.1 ENST00000659445.1 ENST00000660245.1 ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 ENST00000668540.1 ENST00000669187.1 ENST00000669611.1 ENST00000669718.1 |
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| CDS CAA 90 bp | TGCAGAAGGGTAGGAATGAACCTCTCCTTCCTTTGCTGCTTTAGCTaGAGCTGGCAAAGAAACATGCTATGTAACCTCTTCTATTACTTT | + |
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Preference number: 6 (lower is better) Translates to: CRRVGMNLSFLCCFS*SWQRNMLCNLFYYF Trigger: AAAGTAATAGAAGAGGTTACATAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCATTCCTACCCTTCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 72 bp | AGTTCTTTTTCTTATTGTTCTCTGCATGCCAGCCGATaGACTTCATCATTCTTACATCTGAGTCATCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SSFSYCSLHASR*TSSFLHLSHQH Trigger: GTGCTGATGACTCAGATGTAAGAATGATGAAGTGCATCGGCTGGCATGCAGAGAACAATAAGAAAAAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000426205.2 ENST00000458615.5 ENST00000654951.1 ENST00000659445.1 ENST00000660245.1 ENST00000661025.1 ENST00000666100.1 ENST00000666668.1 ENST00000668540.1 ENST00000669187.1 ENST00000669611.1 ENST00000669718.1 |
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| CDS CCA 72 bp | ATGAACCTCTCCTTCCTTTGCTGCTTTAGCTTGAGCTaGCAAAGAAACATGCTATGTAACCTCTTCTATTAC | + |
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Preference number: 6 (lower is better) Translates to: MNLSFLCCFSLS*QRNMLCNLFYY Trigger: GTAATAGAAGAGGTTACATAGCATGTTTCTTTGCCAGCTCAAGCTAAAGCAGCAAAGGAAGGAGAGGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 72 bp | GTGAAAGTGTCTACCATTAGATATTGCAGTAGCAACTaGGTGATCAGCCATTTGATTTCCTTCAGTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VKVSTIRYCSSN*VISHLISFSQR Trigger: CCTTTGACTGAAGGAAATCAAATGGCTGATCACCCAGTTGCTACTGCAATATCTAATGGTAGACACTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 72 bp | TTAACTCCTTCTGTAAAAGATGAGGAACGTACCACTTaGCAAGTTGGGCATCACTGGATAATAGCTTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LTPSVKDEERTT*QVGHHWIIALA Trigger: AGCTAAAGCTATTATCCAGTGATGCCCAACTTGCCAAGTGGTACGTTCCTCATCTTTTACAGAAGGAGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | CTAGTCCCATACCAGGGACATACCCCATTTCATGCATaGTATGTTGACATTGAGGGCTATATAATTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVPYQGHTPFHA*YVDIEGYIIVL Trigger: CAGAACAATTATATAGCCCTCAATGTCAACATACAATGCATGAAATGGGGTATGTCCCTGGTATGGGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | ATTAGATATTGCAGTAGCAACTGGGTGATCAGCCATTaGATTTCCTTCAGTCAAAGGTCCTGGAAGAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IRYCSSNWVISH*ISFSQRSWKSV Trigger: TACACTCTTCCAGGACCTTTGACTGAAGGAAATCAAATGGCTGATCACCCAGTTGCTACTGCAATATCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | TTGTTATTGGATCTCTTCACCAAATCTGTTGTTCTGTTTCTGTCTTaGCAGCTGGTTTCTGTCAATGCTGTTCAGCTGCTGATAACATCT | + |
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Preference number: 6 (lower is better) Translates to: LLLDLFTKSVVLFLS*QLVSVNAVQLLITS Trigger: AGATGTTATCAGCAGCTGAACAGCATTGACAGAAACCAGCTGCAAAGACAGAAACAGAACAACAGATTTGGTGAAGAGATCCAATAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 72 bp | AACAACAGAAGACAGAAGGTACGCTGGTGGCATCTGTaGGTTCTAATGTGCAAAACTCTAAAATCCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: NNRRQKVRWWHL*VLMCKTLKSKY Trigger: ATATTTGGATTTTAGAGTTTTGCACATTAGAACCCACAGATGCCACCAGCGTACCTTCTGTCTTCTGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669611.1 |
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| CDS CAA 90 bp | GAAGGCAATCCTGGCTGTAATGCTCCCATAGGTTGTATAACTGAATaGATGGCTCTTAAGTCAGTTAACATTCTCCATTTACCTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: EGNPGCNAPIGCITE*MALKSVNILHLPDF Trigger: AAAATCAGGTAAATGGAGAATGTTAACTGACTTAAGAGCCATCAATTCAGTTATACAACCTATGGGAGCATTACAGCCAGGATTGCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | ACCTATTTCCCAACTTTTTGTTATTGGATCTCTTCACCAAATCTGTaGTTCTGTTTCTGTCTTTGCAGCTGGTTTCTGTCAATGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TYFPTFCYWISSPNL*FCFCLCSWFLSMLF Trigger: GAACAGCATTGACAGAAACCAGCTGCAAAGACAGAAACAGAACAACAGATTTGGTGAAGAGATCCAATAACAAAAAGTTGGGAAATAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | GTCAATACCTCAATTACCGCTATAAGCTCCACTTTTTaGGCTGAGGTACAGGATGTCTGGAAAACTTTAATT | + |
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Preference number: 6 (lower is better) Translates to: VNTSITAISSTF*AEVQDVWKTLI Trigger: AATTAAAGTTTTCCAGACATCCTGTACCTCAGCTCAAAAAGTGGAGCTTATAGCGGTAATTGAGGTATTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CCA 72 bp | GCAAGTGATCATAACATTGGAGTAATATTTCTCAAGTaGGGGCAGCACAAAGTATATCATCCATATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: ASDHNIGVIFLK*GQHKVYHPYGE Trigger: TTCACCATATGGATGATATACTTTGTGCTGCCCCCACTTGAGAAATATTACTCCAATGTTATGATCACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | CCTGGCTGTAATGCTCCCATAGGTTGTATAACTGAATaGATGGCTCTTAAGTCAGTTAACATTCTCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: PGCNAPIGCITE*MALKSVNILHL Trigger: TAAATGGAGAATGTTAACTGACTTAAGAGCCATCAATTCAGTTATACAACCTATGGGAGCATTACAGCCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | AAGTGTCCTGAAATGGAGCATAATGTTCCTGCTTCATaGCATTATGTCCATATTGTAGCTCAGAAGTGTATT | + |
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Preference number: 6 (lower is better) Translates to: KCPEMEHNVPAS*HYVHIVAQKCI Trigger: AATACACTTCTGAGCTACAATATGGACATAATGTCATGAAGCAGGAACATTATGCTCCATTTCAGGACACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000426205.2 ENST00000654951.1 ENST00000660245.1 ENST00000661025.1 ENST00000668540.1 |
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| CDS TCA 72 bp | TACAGTTTGGTTTTATACATTTCAGGGAAGCAGGAGTaGCGTAAGTCAGTATGTAGAATGTATACATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: YSLVLYISGKQE*RKSVCRMYTLA Trigger: AGCCAATGTATACATTCTACATACTGACTTACGTCACTCCTGCTTCCCTGAAATGTATAAAACCAAACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669187.1 |
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| CDS CAA 90 bp | CTGTGTCATAAAGTGATTGCATCCAGGCATTATTGCCAGCCAAGATaGATAAATATACCTAATAAGTATAATTGTTCTCTATGTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LCHKVIASRHYCQPR*INIPNKYNCSLCQP Trigger: GGGCTGACATAGAGAACAATTATACTTATTAGGTATATTTATCAATCTTGGCTGGCAATAATGCCTGGATGCAATCACTTTATGACACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 90 bp | CCCAGGTTGTCCATCAGGCCTTTCATAATGCAAAATATAACTACTTaGATATACTTCAGCAACTTTACCAACTCCAACTATGTTAAATTG | + |
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Preference number: 6 (lower is better) Translates to: PRLSIRPFIMQNITT*IYFSNFTNSNYVKL Trigger: CAATTTAACATAGTTGGAGTTGGTAAAGTTGCTGAAGTATATCAAAGTAGTTATATTTTGCATTATGAAAGGCCTGATGGACAACCTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | CCTAGTAATTTTCGAAAGTCATTTAATGTTTTTAGTTaGTCCCTACGTACGGTTACTTTCTGTGGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: PSNFRKSFNVFS*SLRTVTFCGTM Trigger: CATTGTGCCACAGAAAGTAACCGTACGTAGGGATCAACTAAAAACATTAAATGACTTTCGAAAATTACTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS TCA 72 bp | CTAATAAGTATAATTGTTCTCTATGTCAGCCCTTATTaGAGGAATACTCATGGCAGTGGTGATAACTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LISIIVLYVSPY*RNTHGSGDNCY Trigger: ATAGCAGTTATCACCACTGCCATGAGTATTCCTTCAATAAGGGCTGACATAGAGAACAATTATACTTATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS GCA 72 bp | TTATTGAGAATACCCCCAGAGTCAGCTAAATGGGTTTaGCAAGTAAGACTATTTATAAAAGCTTGCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: LLRIPPESAKWV*QVRLFIKACCI Trigger: AATACAGCAAGCTTTTATAAATAGTCTTACTTGGCAAACCCATTTAGCTGACTCTGGGGGTATTCTCAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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| CDS CAA 72 bp | AGTTACAGAAGTTATAATCGGTTGAATAGTCCCAGGTaGTCCATCAGGCCTTTCATAATGCAAAATATAACT | + |
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Preference number: 6 (lower is better) Translates to: SYRSYNRLNSPR*SIRPFIMQNIT Trigger: AGTTATATTTTGCATTATGAAAGGCCTGATGGACAACCTGGGACTATTCAACCGATTATAACTTCTGTAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659445.1 |
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