Pregenerated sensors for LINC01440 (Homo sapiens)
Ensembl gene IDs: ENSG00000235166Ensembl transcript IDs: ENST00000416190.5, ENST00000450623.7, ENST00000596828.1, ENST00000598445.6, ENST00000608080.1, ENST00000610112.5, ENST00000625237.1, ENST00000627300.2, ENST00000627529.2, ENST00000629744.2, ENST00000654685.1, ENST00000660487.1, ENST00000662550.1, ENST00000664886.1, ENST00000667361.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTCCAGCACAGTTAGACGGCCCTGTGCCAGCAATCCTGCCAACTaGAGGGGCACTAGGCAGACCGGGCTTTTCCATCTTCTCGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: PSSTVRRPCASNPAN*RGTRQTGLFHLLGH Trigger: GTGACCGAGAAGATGGAAAAGCCCGGTCTGCCTAGTGCCCCTTCAGTTGGCAGGATTGCTGGCACAGGGCCGTCTAACTGTGCTGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS CCA 90 bp | GGATTAGCCAGTTTGAATAATGTTGCAGGCTCTGGGCTCCAGCAGTaGTCTCTAGCTGTCTGGTTCCTGACCCTGAGTGACGTAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GLASLNNVAGSGLQQ*SLAVWFLTLSDVGQ Trigger: CTGCCCTACGTCACTCAGGGTCAGGAACCAGACAGCTAGAGACCACTGCTGGAGCCCAGAGCCTGCAACATTATTCAAACTGGCTAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS GCA 90 bp | GCAGACCGGGCTTTTCCATCTTCTCGGTCACTCCTCTTGTCACGATaGTTAACAAATTGGCAGCAGAAGCAGCAGTGGTTTTCCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ADRAFPSSRSLLLSR*LTNWQQKQQWFSCQ Trigger: CTGACAGGAAAACCACTGCTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAAGATGGAAAAGCCCGGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS GCA 90 bp | CAGCAGCTACGTATGGTTGCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAACCAGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: QQLRMVAGFRCAGFI*FSPLRVLIYSNQPY Trigger: GTATGGCTGGTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGCAACCATACGTAGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627300.2 |
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| CDS GCA 90 bp | TTTTCTCCTCAATTGCAGGCTGGGGAAGCAGGTCTCTGGTTAGTCTaGCTTAAACGCTGTCCTGGAGCTGAGAGTTGCAGTAATAATGGT | + |
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Preference number: 5 (lower is better) Translates to: FSPQLQAGEAGLWLV*LKRCPGAESCSNNG Trigger: ACCATTATTACTGCAACTCTCAGCTCCAGGACAGCGTTTAAGGCAGACTAACCAGAGACCTGCTTCCCCAGCCTGCAATTGAGGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660487.1 ENST00000662550.1 |
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| CDS GCA 90 bp | AGAGCACTTGCTGGAAAGCCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAACCAGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: RALAGKPGFRCAGFI*FSPLRVLIYSNQPY Trigger: GTATGGCTGGTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGGCTTTCCAGCAAGTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667361.1 |
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| CDS GCA 90 bp | GTGATGGAGAAATTGTCCTCCAAATTCTCTTGGTGGCCCCCTGCATaGTCTTTTATAATGTCTACCTGGCAGGTGCACTGGCCATACAAT | + |
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Preference number: 5 (lower is better) Translates to: VMEKLSSKFSWWPPA*SFIMSTWQVHWPYN Trigger: ATTGTATGGCCAGTGCACCTGCCAGGTAGACATTATAAAAGAGCATGCAGGGGGCCACCAAGAGAATTTGGAGGACAATTTCTCCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS GCA 90 bp | GCACATGCACACTCTGAATCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAACCAGCCATAC | + |
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Preference number: 5 (lower is better) Translates to: AHAHSESGFRCAGFI*FSPLRVLIYSNQPY Trigger: GTATGGCTGGTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGATTCAGAGTGTGCATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS CCA 90 bp | TTTCCATCTTCTCGGTCACTCCTCTTGTCACGATGCTTAACAAATTaGCAGCAGAAGCAGCAGTGGTTTTCCTGTCAGACTTGTATCTGC | + |
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Preference number: 5 (lower is better) Translates to: FPSSRSLLLSRCLTN*QQKQQWFSCQTCIC Trigger: GCAGATACAAGTCTGACAGGAAAACCACTGCTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAAGATGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS CCA 90 bp | CAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATTGTG | + |
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Preference number: 5 (lower is better) Translates to: QVTFCIISPFPCVSN*LILAPLPEVVGIIV Trigger: CACAATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS CCA 90 bp | CAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATCTCT | + |
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Preference number: 5 (lower is better) Translates to: QVTFCIISPFPCVSN*LILAPLPEVVGIIS Trigger: AGAGATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627529.2 |
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| CDS TCA 90 bp | CTGGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATCTTTaGAATCCAAAACCACATACTGTTTCAGGACCCAGGAGGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: LVDTCTSPRSCRDYL*NPKPHTVSGPRRDL Trigger: TAAATCCCTCCTGGGTCCTGAAACAGTATGTGGTTTTGGATTTCAAAGATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000608080.1 ENST00000610112.5 ENST00000654685.1 ENST00000660487.1 ENST00000664886.1 |
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| CDS CCA 90 bp | CAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: QVTFCIISPFPCVSN*LILAPLPEVVGIIF Trigger: AAAGATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000608080.1 ENST00000610112.5 ENST00000654685.1 ENST00000660487.1 ENST00000664886.1 |
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| CDS CCA 90 bp | TTTGGCATTAGTTCTATACAAATGGAAACCAAGTTGGGCAAGTCCTaGGTCAAACACCTGCTAAGGTCAGAACTAGTGGAAAGAGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: FGISSIQMETKLGKS*VKHLLRSELVERVC Trigger: ACACACTCTTTCCACTAGTTCTGACCTTAGCAGGTGTTTGACCCAGGACTTGCCCAACTTGGTTTCCATTTGTATAGAACTAATGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450623.7 ENST00000598445.6 |
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| CDS CCA 90 bp | CAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATAGTT | + |
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Preference number: 5 (lower is better) Translates to: QVTFCIISPFPCVSN*LILAPLPEVVGIIV Trigger: AACTATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629744.2 |
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| CDS TCA 90 bp | TTTACAGGGAGCCTCTGGAAACATGGAAGTTTTGAAAATGGTCTGTaGTCTTGTCTTTGTCCTCAGCAGAGAAGAAAGGTTGACAATCTG | + |
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Preference number: 5 (lower is better) Translates to: FTGSLWKHGSFENGL*SCLCPQQRRKVDNL Trigger: CAGATTGTCAACCTTTCTTCTCTGCTGAGGACAAAGACAAGATCACAGACCATTTTCAAAACTTCCATGTTTCCAGAGGCTCCCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS TCA 90 bp | CTTATAATTATGGCTGAAGGGAAAGCAAACACATCCATCTTCACATaGTGGCAGGAAGGAGAAATGCTGAACTCTACCACCAACTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LIIMAEGKANTSIFT*WQEGEMLNSTTNCK Trigger: TTTGCAGTTGGTGGTAGAGTTCAGCATTTCTCCTTCCTGCCATCATGTGAAGATGGATGTGTTTGCTTTCCCTTCAGCCATAATTATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS GCA 90 bp | TCCTTTGAAACTTTGGGTAAGTCACTGGATCTCATATCCCTGATCTaGATGAGAGGCATTATTTTCATACTGCAAGGTTATGCTGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SFETLGKSLDLISLI*MRGIIFILQGYAAE Trigger: CTCTGCAGCATAACCTTGCAGTATGAAAATAATGCCTCTCATGCAGATCAGGGATATGAGATCCAGTGACTTACCCAAAGTTTCAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000627529.2 ENST00000629744.2 |
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| CDS CCA 90 bp | CAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGGATTATAAAA | + |
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Preference number: 5 (lower is better) Translates to: QVTFCIISPFPCVSN*LILAPLPEVVGIIK Trigger: TTTTATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596828.1 |
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| CDS TCA 90 bp | GCAATACCTTTTAGGAAGAATATGGGAAAGATCACAGATTCTAAATaGAATCTCCAAAAGCTGAATCATGGCCAAGCCAGGAGATCCGTG | + |
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Preference number: 5 (lower is better) Translates to: AIPFRKNMGKITDSK*NLQKLNHGQARRSV Trigger: CACGGATCTCCTGGCTTGGCCATGATTCAGCTTTTGGAGATTTCATTTAGAATCTGTGATCTTTCCCATATTCTTCCTAAAAGGTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS TCA 90 bp | CTCCGACCTGGAACTGTTGCTTCATTTGCATTGTTAACTGTATTATaGATATGTTCAACTCCATTCCTGGCACTTGATGCCTTAATAGGC | + |
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Preference number: 5 (lower is better) Translates to: LRPGTVASFALLTVL*ICSTPFLALDALIG Trigger: GCCTATTAAGGCATCAAGTGCCAGGAATGGAGTTGAACATATTCATAATACAGTTAACAATGCAAATGAAGCAACAGTTCCAGGTCGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000596828.1 ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS TCA 90 bp | CTATTTAATCAGCTCCACGTTTCTGACAAATGTGAAGAGCAACTGTaGATACAGCTCGGCTGCTTAATTCCAGACTGTTTTATGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LFNQLHVSDKCEEQL*IQLGCLIPDCFMLE Trigger: CTCCAACATAAAACAGTCTGGAATTAAGCAGCCGAGCTGTATTCACAGTTGCTCTTCACATTTGTCAGAAACGTGGAGCTGATTAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 90 bp | ATAACTCCTTTTAGGAAGAATATGGGAAAGATCACAGATTCTAAATaGAATCTCCAAAAGCTGAATCATGGCCAAGCCAGGAGATCCGTG | + |
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Preference number: 5 (lower is better) Translates to: ITPFRKNMGKITDSK*NLQKLNHGQARRSV Trigger: CACGGATCTCCTGGCTTGGCCATGATTCAGCTTTTGGAGATTTCATTTAGAATCTGTGATCTTTCCCATATTCTTCCTAAAAGGAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS TCA 90 bp | GATTTGTATGCAGAGGGTCACTTTCAGGCCAGTTGTTATTGCCTTTaGGAATTAGCTCTATTTAATCAGCTCCACGTTTCTGACAAATGT | + |
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Preference number: 5 (lower is better) Translates to: DLYAEGHFQASCYCL*ELALFNQLHVSDKC Trigger: ACATTTGTCAGAAACGTGGAGCTGATTAAATAGAGCTAATTCTCAAAGGCAATAACAACTGGCCTGAAAGTGACCCTCTGCATACAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS GCA 90 bp | ATCACACTTCACTGCCTTCTGTGTAAATTTGTTCAAGTCACTTTCTaGATTATATCACCCTTTCCCTGTGTCTCCAACTGGTTGATACTT | + |
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Preference number: 5 (lower is better) Translates to: ITLHCLLCKFVQVTF*IISPFPCVSNWLIL Trigger: AAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTGAACAAATTTACACAGAAGGCAGTGAAGTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627300.2 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 90 bp | TATTTGGAAAATGAGTCACACATGGACTTTTCCATACATCTTGGCTaGCTAGTTCACCATTTAGAAGATTCCTCTGTAGTTGCTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: YLENESHMDFSIHLG*LVHHLEDSSVVADE Trigger: TTCATCAGCAACTACAGAGGAATCTTCTAAATGGTGAACTAGTCAGCCAAGATGTATGGAAAAGTCCATGTGTGACTCATTTTCCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS GCA 90 bp | TTCTCTCTCAATTTCATTTCAGAAAGCCAGAACATGTATTTCTCTTaGTTATCCCAGGCAGGATCTAAATATGCAAATATGCCACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: FSLNFISESQNMYFS*LSQAGSKYANMPLF Trigger: GAAAAGTGGCATATTTGCATATTTAGATCCTGCCTGGGATAAGCAAGAGAAATACATGTTCTGGCTTTCTGAAATGAAATTGAGAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596828.1 |
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| CDS TCA 90 bp | ATTGTTAACTGTATTATGAATATGTTCAACTCCATTCCTGGCACTTaGTGCCTTAATAGGCTTTCAAAGGGGTTTTGTGATGGAGAAATT | + |
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Preference number: 5 (lower is better) Translates to: IVNCIMNMFNSIPGT*CLNRLSKGFCDGEI Trigger: AATTTCTCCATCACAAAACCCCTTTGAAAGCCTATTAAGGCATCAAGTGCCAGGAATGGAGTTGAACATATTCATAATACAGTTAACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS GCA 90 bp | TTGCTTTTGATAACTCTCTGCGGGAAACATCTTTACCAACTAGAGTaGTTATGTGAAGTTCTTTCTGCCTTTAATCTTATAGATTCTACT | + |
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Preference number: 5 (lower is better) Translates to: LLLITLCGKHLYQLE*LCEVLSAFNLIDST Trigger: AGTAGAATCTATAAGATTAAAGGCAGAAAGAACTTCACATAAGCACTCTAGTTGGTAAAGATGTTTCCCGCAGAGAGTTATCAAAAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625237.1 |
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| CDS CCA 72 bp | GCAGGCTCTGGGCTCCAGCAGTGGTCTCTAGCTGTCTaGTTCCTGACCCTGAGTGACGTAGGGCAGGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AGSGLQQWSLAV*FLTLSDVGQGK Trigger: TTTCCCCTGCCCTACGTCACTCAGGGTCAGGAACCAGACAGCTAGAGACCACTGCTGGAGCCCAGAGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | GCAGTGGTCTCTAGCTGTCTGGTTCCTGACCCTGAGTaGCGTAGGGCAGGGGAAACATTGGCTTGGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVVSSCLVPDPE*RRAGETLAWCG Trigger: CCCACACCAAGCCAATGTTTCCCCTGCCCTACGTCACTCAGGGTCAGGAACCAGACAGCTAGAGACCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | ACAGTTAGACGGCCCTGTGCCAGCAATCCTGCCAACTaGAGGGGCACTAGGCAGACCGGGCTTTTCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: TVRRPCASNPAN*RGTRQTGLFHL Trigger: AAGATGGAAAAGCCCGGTCTGCCTAGTGCCCCTTCAGTTGGCAGGATTGCTGGCACAGGGCCGTCTAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS GCA 72 bp | CAATTGCAGGCTGGGGAAGCAGGTCTCTGGTTAGTCTaGCTTAAACGCTGTCCTGGAGCTGAGAGTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QLQAGEAGLWLV*LKRCPGAESCS Trigger: ACTGCAACTCTCAGCTCCAGGACAGCGTTTAAGGCAGACTAACCAGAGACCTGCTTCCCCAGCCTGCAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660487.1 ENST00000662550.1 |
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| CDS CCA 72 bp | TTTTCTCCTCAATTGCAGGCTGGGGAAGCAGGTCTCTaGTTAGTCTGCCTTAAACGCTGTCCTGGAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FSPQLQAGEAGL*LVCLKRCPGAE Trigger: CTCAGCTCCAGGACAGCGTTTAAGGCAGACTAACCAGAGACCTGCTTCCCCAGCCTGCAATTGAGGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660487.1 ENST00000662550.1 |
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| CDS CCA 72 bp | TTCCTGACCCTGAGTGACGTAGGGCAGGGGAAACATTaGCTTGGTGTGGGAGAGTTAGAAAAGGAAGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: FLTLSDVGQGKH*LGVGELEKEAV Trigger: AACCGCTTCCTTTTCTAACTCTCCCACACCAAGCCAATGTTTCCCCTGCCCTACGTCACTCAGGGTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS CAA 72 bp | GAAGCGGTTGGGGCTGTAGACTCGGGGTTGGCTGATTaGTATGCAGAGGGTCACTTTCAGGCCAGTTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: EAVGAVDSGLAD*YAEGHFQASCY Trigger: ATAACAACTGGCCTGAAAGTGACCCTCTGCATACAAATCAGCCAACCCCGAGTCTACAGCCCCAACCGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS CAA 72 bp | GCAGACCGGGCTTTTCCATCTTCTCGGTCACTCCTCTaGTCACGATGCTTAACAAATTGGCAGCAGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ADRAFPSSRSLL*SRCLTNWQQKQ Trigger: CTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAAGATGGAAAAGCCCGGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS CAA 72 bp | GGGCAGGGCAGAGTAAGCAATTTAGGATTAGCCAGTTaGAATAATGTTGCAGGCTCTGGGCTCCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GQGRVSNLGLAS*NNVAGSGLQQW Trigger: CCACTGCTGGAGCCCAGAGCCTGCAACATTATTCAAACTGGCTAATCCTAAATTGCTTACTCTGCCCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS CAA 90 bp | AGAAAGGAAGGGCAGGGCAGAGTAAGCAATTTAGGATTAGCCAGTTaGAATAATGTTGCAGGCTCTGGGCTCCAGCAGTGGTCTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RKEGQGRVSNLGLAS*NNVAGSGLQQWSLA Trigger: AGCTAGAGACCACTGCTGGAGCCCAGAGCCTGCAACATTATTCAAACTGGCTAATCCTAAATTGCTTACTCTGCCCTGCCCTTCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS GCA 72 bp | AAATTGTCCTCCAAATTCTCTTGGTGGCCCCCTGCATaGTCTTTTATAATGTCTACCTGGCAGGTGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: KLSSKFSWWPPA*SFIMSTWQVHW Trigger: CCAGTGCACCTGCCAGGTAGACATTATAAAAGAGCATGCAGGGGGCCACCAAGAGAATTTGGAGGACAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS GCA 72 bp | GGAGAAATTGTCCTCCAAATTCTCTTGGTGGCCCCCTaGATGCTCTTTTATAATGTCTACCTGGCAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GEIVLQILLVAP*MLFYNVYLAGA Trigger: TGCACCTGCCAGGTAGACATTATAAAAGAGCATGCAGGGGGCCACCAAGAGAATTTGGAGGACAATTTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS GCA 72 bp | GCTGGAAAGCCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: AGKPGFRCAGFI*FSPLRVLIYSN Trigger: GTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGGCTTTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667361.1 |
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| CDS CCA 72 bp | TGGTGGCCCCCTGCATGCTCTTTTATAATGTCTACCTaGCAGGTGCACTGGCCATACAATGAATTCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: WWPPACSFIMST*QVHWPYNEFSN Trigger: ATTGCTGAATTCATTGTATGGCCAGTGCACCTGCCAGGTAGACATTATAAAAGAGCATGCAGGGGGCCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS CAA 72 bp | TTCTCGGTCACTCCTCTTGTCACGATGCTTAACAAATaGGCAGCAGAAGCAGCAGTGGTTTTCCTGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: FSVTPLVTMLNK*AAEAAVVFLSD Trigger: GTCTGACAGGAAAACCACTGCTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS TCA 72 bp | ATGGCTGAAGGGAAAGCAAACACATCCATCTTCACATaGTGGCAGGAAGGAGAAATGCTGAACTCTACCACC | + |
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Preference number: 6 (lower is better) Translates to: MAEGKANTSIFT*WQEGEMLNSTT Trigger: GGTGGTAGAGTTCAGCATTTCTCCTTCCTGCCATCATGTGAAGATGGATGTGTTTGCTTTCCCTTCAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS GCA 72 bp | GCTTTTCCATCTTCTCGGTCACTCCTCTTGTCACGATaGTTAACAAATTGGCAGCAGAAGCAGCAGTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: AFPSSRSLLLSR*LTNWQQKQQWF Trigger: AAACCACTGCTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAAGATGGAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS GCA 72 bp | GTCTTTGTCCTCAGCAGAGAAGAAAGGTTGACAATCTaGTCCTCGGGGTTCAGATCTTGTGAAAATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VFVLSREERLTI*SSGFRSCENQS Trigger: GGACTGATTTTCACAAGATCTGAACCCCGAGGAGCAGATTGTCAACCTTTCTTCTCTGCTGAGGACAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS GCA 72 bp | ATCACCCTTTCCCTGTGTCTCCAACTGGTTGATACTTaGACCTCTCCCAGAAGTTGTAGGGATTATTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ITLSLCLQLVDT*TSPRSCRDYCE Trigger: CTCACAATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS GCA 72 bp | GGGAAGTCCCCAACTGGTTCAAATTCTTCTACTCTGTaGTTTCAGAAATCCTGGTACCTCTTCTTGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GKSPTGSNSSTL*FQKSWYLFLRV Trigger: GACCCTCAAGAAGAGGTACCAGGATTTCTGAAAGCACAGAGTAGAAGAATTTGAACCAGTTGGGGACTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596828.1 |
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| CDS GCA 72 bp | CGTATGGTTGCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RMVAGFRCAGFI*FSPLRVLIYSN Trigger: GTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGCAACCATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627300.2 |
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| CDS GCA 72 bp | ATCACCCTTTCCCTGTGTCTCCAACTGGTTGATACTTaGACCTCTCCCAGAAGTTGTAGGGATTATAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ITLSLCLQLVDT*TSPRSCRDYSC Trigger: GCAACTATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629744.2 |
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| CDS CCA 72 bp | TTCTGCATTATATCACCCTTTCCCTGTGTCTCCAACTaGTTGATACTTGCACCTCTCCCAGAAGTTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: FCIISPFPCVSN*LILAPLPEVVG Trigger: CCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS CAA 90 bp | TTTTCCATCTTCTCGGTCACTCCTCTTGTCACGATGCTTAACAAATaGGCAGCAGAAGCAGCAGTGGTTTTCCTGTCAGACTTGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: FSIFSVTPLVTMLNK*AAEAAVVFLSDLYL Trigger: CAGATACAAGTCTGACAGGAAAACCACTGCTGCTTCTGCTGCCAATTTGTTAAGCATCGTGACAAGAGGAGTGACCGAGAAGATGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416190.5 ENST00000654685.1 ENST00000660487.1 |
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| CDS CAA 90 bp | TCCAGCAAATTGAACTGGACCTTTAAGATTGCTGTGTCTGGAGAATaGAGAGGAGAAGGTGGAGCAAGATGGCCAAATACAATCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKLNWTFKIAVSGE*RGEGGARWPNTILQ Trigger: CTGGAGGATTGTATTTGGCCATCTTGCTCCACCTTCTCCTCTCAATTCTCCAGACACAGCAATCTTAAAGGTCCAGTTCAATTTGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627529.2 ENST00000629744.2 |
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| CDS CAA 90 bp | ATAGAGGCTGCTGTTTGTGGTGCTCAGTACTGCAGAGAGAAAAGCTaGGGCCTAGATAAACACACAGTATCTGCTTCCCTGGAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IEAAVCGAQYCREKS*GLDKHTVSASLEKF Trigger: AAACTTTTCCAGGGAAGCAGATACTGTGTGTTTATCTAGGCCCAAGCTTTTCTCTCTGCAGTACTGAGCACCACAAACAGCAGCCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS TCA 72 bp | GAGGCAGTGGGTAGTCTTATAAAAGAAGACATAACCTaGGGTCGCTTTGTTGTTTTTCCAGGGCTGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: EAVGSLIKEDIT*GRFVVFPGLHP Trigger: TGGATGCAGCCCTGGAAAAACAACAAAGCGACCTCAGGTTATGTCTTCTTTTATAAGACTACCCACTGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000416190.5 ENST00000625237.1 ENST00000627300.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS GCA 72 bp | ATCACCCTTTCCCTGTGTCTCCAACTGGTTGATACTTaGACCTCTCCCAGAAGTTGTAGGGATTATCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ITLSLCLQLVDT*TSPRSCRDYLL Trigger: TAAGAGATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627529.2 |
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| CDS GCA 72 bp | CACTCTGAATCTGGGTTCAGGTGTGCTGGTTTTATATaGTTTTCTCCTCTGAGGGTCCTGATATACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: HSESGFRCAGFI*FSPLRVLIYSN Trigger: GTTGGAGTATATCAGGACCCTCAGAGGAGAAAAGCATATAAAACCAGCACACCTGAACCCAGATTCAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS CAA 72 bp | TGCATTATATCACCCTTTCCCTGTGTCTCCAACTGGTaGATACTTGCACCTCTCCCAGAAGTTGTAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: CIISPFPCVSNW*ILAPLPEVVGI Trigger: AATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGATATAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | CAGCTCCACGTTTCTGACAAATGTGAAGAGCAACTGTaGATACAGCTCGGCTGCTTAATTCCAGACTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QLHVSDKCEEQL*IQLGCLIPDCF Trigger: AAAACAGTCTGGAATTAAGCAGCCGAGCTGTATTCACAGTTGCTCTTCACATTTGTCAGAAACGTGGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS CCA 72 bp | AGTTCTATACAAATGGAAACCAAGTTGGGCAAGTCCTaGGTCAAACACCTGCTAAGGTCAGAACTAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSIQMETKLGKS*VKHLLRSELVE Trigger: TTCCACTAGTTCTGACCTTAGCAGGTGTTTGACCCAGGACTTGCCCAACTTGGTTTCCATTTGTATAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450623.7 ENST00000598445.6 |
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| CDS CAA 90 bp | TGCATGAGAGGCATTATTTTCATACTGCAAGGTTATGCTGCAGAGTaGTGTGGGGCACAGTCTAGACTGCTTGAATTTGAATCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: CMRGIIFILQGYAAE*CGAQSRLLEFESHF Trigger: GAAGTGTGATTCAAATTCAAGCAGTCTAGACTGTGCCCCACACAACTCTGCAGCATAACCTTGCAGTATGAAAATAATGCCTCTCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627300.2 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | ACACACAGTATCTGCTTCCCTGGAAAAGTTTCTGGGTaGTGCAATCATTCATATCCAAACCTCAGTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: THSICFPGKVSG*CNHSYPNLSFP Trigger: TGGGAAACTGAGGTTTGGATATGAATGATTGCATCACCCAGAAACTTTTCCAGGGAAGCAGATACTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS TCA 72 bp | GCAGAGGGTCACTTTCAGGCCAGTTGTTATTGCCTTTaGGAATTAGCTCTATTTAATCAGCTCCACGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AEGHFQASCYCL*ELALFNQLHVS Trigger: AGAAACGTGGAGCTGATTAAATAGAGCTAATTCTCAAAGGCAATAACAACTGGCCTGAAAGTGACCCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664886.1 ENST00000667361.1 |
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| CDS GCA 72 bp | ATCACCCTTTCCCTGTGTCTCCAACTGGTTGATACTTaGACCTCTCCCAGAAGTTGTAGGGATTATAAAATT | + |
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Preference number: 6 (lower is better) Translates to: ITLSLCLQLVDT*TSPRSCRDYKI Trigger: AATTTTATAATCCCTACAACTTCTGGGAGAGGTGCAAGTATCAACCAGTTGGAGACACAGGGAAAGGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596828.1 |
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| CDS CAA 72 bp | GGCATTATTTTCATACTGCAAGGTTATGCTGCAGAGTaGTGTGGGGCACAGTCTAGACTGCTTGAATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GIIFILQGYAAE*CGAQSRLLEFE Trigger: TTCAAATTCAAGCAGTCTAGACTGTGCCCCACACAACTCTGCAGCATAACCTTGCAGTATGAAAATAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627300.2 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | CATCCATCTTCACATGATGGCAGGAAGGAGAAATGCTaGACTCTACCACCAACTGCAAAATTAAAATCGAAG | + |
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Preference number: 6 (lower is better) Translates to: HPSSHDGRKEKC*TLPPTAKLKSK Trigger: CTTCGATTTTAATTTTGCAGTTGGTGGTAGAGTTCAGCATTTCTCCTTCCTGCCATCATGTGAAGATGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS TCA 72 bp | ACGTGGATAGGGAGGACTCAAAATCACGGTGGAAAGTaGAAAGCACATCTCTTATGTATTCTCAAAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: TWIGRTQNHGGK*KAHLLCILKVV Trigger: TACCACTTTGAGAATACATAAGAGATGTGCTTTTCACTTTCCACCGTGATTTTGAGTCCTCCCTATCCACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629744.2 |
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| CDS GCA 72 bp | TGGCAGGAAGGAGAAATGCTGAACTCTACCACCAACTaGAAAATTAAAATCGAAGAGTTGAACTCGGGAATA | + |
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Preference number: 6 (lower is better) Translates to: WQEGEMLNSTTN*KIKIEELNSGI Trigger: TATTCCCGAGTTCAACTCTTCGATTTTAATTTTGCAGTTGGTGGTAGAGTTCAGCATTTCTCCTTCCTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416190.5 ENST00000667361.1 |
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| CDS GCA 72 bp | TTTTCTTTTTCTCATCTGCAAAGTGGTAGCAGTAATTaGATGAGGCTCGTAGGAAGGTTGCCAACAGTATTG | + |
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Preference number: 6 (lower is better) Translates to: FSFSHLQSGSSN*MRLVGRLPTVL Trigger: CAATACTGTTGGCAACCTTCCTACGAGCCTCATGCAATTACTGCTACCACTTTGCAGATGAGAAAAAGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000450623.7 |
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| CDS CAA 72 bp | ATTTTAACTTCCAGTAAAAAGGTAGAGCATGAGGCTTaGGGATTTGGGATTTGGAGACACTCAGATGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ILTSSKKVEHEA*GFGIWRHSDVS Trigger: GCTCACATCTGAGTGTCTCCAAATCCCAAATCCCAAAGCCTCATGCTCTACCTTTTTACTGGAAGTTAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000450623.7 |
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| CDS TCA 72 bp | CTTGTTGCCTCTATGAGTTTGCCTTTATCTGTAGTTTaGCCTCATAAAAGTCCAGGAAGGAAAGAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVASMSLPLSVV*PHKSPGRKELK Trigger: CTTCAACTCTTTCCTTCCTGGACTTTTATGAGGTCAAACTACAGATAAAGGCAAACTCATAGAGGCAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660487.1 ENST00000662550.1 |
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| CDS GCA 72 bp | ACTTTGGGTAAGTCACTGGATCTCATATCCCTGATCTaGATGAGAGGCATTATTTTCATACTGCAAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: TLGKSLDLISLI*MRGIIFILQGY Trigger: ATAACCTTGCAGTATGAAAATAATGCCTCTCATGCAGATCAGGGATATGAGATCCAGTGACTTACCCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000627529.2 ENST00000629744.2 |
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| CDS CAA 90 bp | AGACTGCTTGAATTTGAATCACACTTCACTGCCTTCTGTGTAAATTaGTTCAAGTCACTTTCTGCATTATATCACCCTTTCCCTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RLLEFESHFTAFCVN*FKSLSALYHPFPVS Trigger: AGACACAGGGAAAGGGTGATATAATGCAGAAAGTGACTTGAACAAATTTACACAGAAGGCAGTGAAGTGTGATTCAAATTCAAGCAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000416190.5 ENST00000450623.7 ENST00000596828.1 ENST00000598445.6 ENST00000608080.1 ENST00000610112.5 ENST00000627300.2 ENST00000627529.2 ENST00000629744.2 ENST00000654685.1 ENST00000660487.1 ENST00000662550.1 ENST00000664886.1 ENST00000667361.1 |
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| CDS TCA 72 bp | GGAACTGTTGCTTCATTTGCATTGTTAACTGTATTATaGATATGTTCAACTCCATTCCTGGCACTTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: GTVASFALLTVL*ICSTPFLALDA Trigger: GGCATCAAGTGCCAGGAATGGAGTTGAACATATTCATAATACAGTTAACAATGCAAATGAAGCAACAGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000596828.1 ENST00000598445.6 ENST00000662550.1 ENST00000667361.1 |
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| CDS TCA 72 bp | AATGAGTCACACATGGACTTTTCCATACATCTTGGCTaGCTAGTTCACCATTTAGAAGATTCCTCTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: NESHMDFSIHLG*LVHHLEDSSVV Trigger: AACTACAGAGGAATCTTCTAAATGGTGAACTAGTCAGCCAAGATGTATGGAAAAGTCCATGTGTGACTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS TCA 72 bp | TGCATTGTTCTAATGATGTACATTCTATTTGGAAAATaGGTCACACATGGACTTTTCCATACATCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CIVLMMYILFGK*VTHGLFHTSWL Trigger: CAGCCAAGATGTATGGAAAAGTCCATGTGTGACTCATTTTCCAAATAGAATGTACATCATTAGAACAATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654685.1 |
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| CDS GCA 72 bp | AATTTCATTTCAGAAAGCCAGAACATGTATTTCTCTTaGTTATCCCAGGCAGGATCTAAATATGCAAATATG | + |
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Preference number: 6 (lower is better) Translates to: NFISESQNMYFS*LSQAGSKYANM Trigger: CATATTTGCATATTTAGATCCTGCCTGGGATAAGCAAGAGAAATACATGTTCTGGCTTTCTGAAATGAAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596828.1 |
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