Pregenerated sensors for LINC01435 (Homo sapiens)
Ensembl gene IDs: ENSG00000229981Ensembl transcript IDs: ENST00000425050.5, ENST00000593666.5, ENST00000594427.5, ENST00000594566.5, ENST00000595603.5, ENST00000596000.5, ENST00000596263.5, ENST00000597234.5, ENST00000597243.5, ENST00000598903.5, ENST00000600953.3, ENST00000601212.5, ENST00000601410.5, ENST00000601466.5, ENST00000601505.5, ENST00000607995.5, ENST00000622852.1, ENST00000627225.2, ENST00000629275.2, ENST00000630847.2, ENST00000631100.1, ENST00000654674.1, ENST00000656439.1, ENST00000659061.1, ENST00000665974.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACTGTGGCATCGCGTCGCCCATGCCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: HCGIASPMPFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGCATGGGCGACGCGATGCCACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593666.5 |
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| CDS GCA 90 bp | CTTTCTGAAGATGCAAAAAGTCACACTGTGGCATCGCGTCGCCCATaGCCTTTCCACCTTCTGTCATGTGAGGACCCAGCGTTCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LSEDAKSHTVASRRP*PFHLLSCEDPAFLP Trigger: GGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGCATGGGCGACGCGATGCCACAGTGTGACTTTTTGCATCTTCAGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593666.5 |
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| CDS TCA 90 bp | CCCACATCAGGTTCCCAGATCTCTGCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: PTSGSQISAFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGCAGAGATCTGGGAACCTGATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425050.5 ENST00000654674.1 |
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| CDS TCA 90 bp | CTGGCCGTGGTTCTGTTTTACAACCCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LAVVLFYNPFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGGTTGTAAAACAGAACCACGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596000.5 |
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| CDS GCA 90 bp | GTGGTCACAGATGAGATTTCTTCCCACATCAGGTTCCCAGATCTCTaGCTTTCCACCTTCTGTCATGTGAGGACCCAGCGTTCCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VVTDEISSHIRFPDL*LSTFCHVRTQRSFP Trigger: TGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGCAGAGATCTGGGAACCTGATGTGGGAAGAAATCTCATCTGTGACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425050.5 ENST00000654674.1 |
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| CDS TCA 90 bp | CTAAGAGCCCCAGTAGGAAAAGAACCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LRAPVGKEPFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGTTCTTTTCCTACTGGGGCTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000601410.5 ENST00000656439.1 |
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| CDS TCA 90 bp | TCCCTGTTTCTTTCGAGGGCAAGAAGCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLFLSRARSFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGCTTCTTGCCCTCGAAAGAAACAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601212.5 |
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| CDS GCA 90 bp | CTGGTCTCCGAGTATATCTGGTTGGTTTTAGTTGCCTCCCATTCTTaGGCCAAACGGGCATCTCTGTTCACATGCAGGGTGCAAAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LVSEYIWLVLVASHS*AKRASLFTCRVQRM Trigger: CATCCTTTGCACCCTGCATGTGAACAGAGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CCA 90 bp | TGGCATCGCGTCGCCCATGCCCAATTACATCTGTCACAGGTCATGTaGAAGCAGTCTGGGAAGCTGACAATTTTCTGGGGAGATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: WHRVAHAQLHLSQVM*KQSGKLTIFWGDFS Trigger: TGAGAAATCTCCCCAGAAAATTGTCAGCTTCCCAGACTGCTTCCACATGACCTGTGACAGATGTAATTGGGCATGGGCGACGCGATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000601410.5 ENST00000659061.1 |
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| CDS TCA 90 bp | ACAAGGTGCCGCCTTGGAAGCAGAGAGCAGCTCTCACCAAGCAACTaGATATCTTTGTGTTGCTCTTCCCAGTCTCCAGAACTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TRCRLGSREQLSPSN*ISLCCSSQSPELSP Trigger: AGGAGAAAGTTCTGGAGACTGGGAAGAGCAACACAAAGATATTCAGTTGCTTGGTGAGAGCTGCTCTCTGCTTCCAAGGCGGCACCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS TCA 90 bp | GTGGGGACCAGTTTGCTCCAGGTTTGCTGCAGCTATAGAATCCCGTaGCTCCTGACAAAATCGTGGTCACAGATGAGATTTCTTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: VGTSLLQVCCSYRIP*LLTKSWSQMRFLPT Trigger: TGTGGGAAGAAATCTCATCTGTGACCACGATTTTGTCAGGAGTCACGGGATTCTATAGCTGCAGCAAACCTGGAGCAAACTGGTCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000425050.5 ENST00000594427.5 ENST00000597243.5 ENST00000654674.1 ENST00000665974.1 |
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| CDS GCA 90 bp | GGAGCTTCCTGCTGGCAGAATTCAGAATGTGCTTCCCCAAAGGAGTaGAATTACATATTCAGCCTCTTTCCCAGATTGGTGGGGACCAGT | + |
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Preference number: 5 (lower is better) Translates to: GASCWQNSECASPKE*NYIFSLFPRLVGTS Trigger: ACTGGTCCCCACCAATCTGGGAAAGAGGCTGAATATGTAATTGCACTCCTTTGGGGAAGCACATTCTGAATTCTGCCAGCAGGAAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665974.1 |
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| CDS CCA 90 bp | GCACGTGCTCAGTTAAATTTCCTCCAGCTTTGCAGCTTGTCACCCTaGTCCTCTTGTCTATTCACCGACTGTTTACCTGTGTCTGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: ARAQLNFLQLCSLSP*SSCLFTDCLPVSGA Trigger: TGCACCAGACACAGGTAAACAGTCGGTGAATAGACAAGAGGACCAGGGTGACAAGCTGCAAAGCTGGAGGAAATTTAACTGAGCACGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS TCA 90 bp | ACAAGGTGCCGCCTTGGAAGCAGAGAGCAGCTCTCACCAAGCAACTaGATATCTTTGTGTTGCTCTTCCCAGTCTCCAGAACATGTATTG | + |
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Preference number: 5 (lower is better) Translates to: TRCRLGSREQLSPSN*ISLCCSSQSPEHVL Trigger: CAATACATGTTCTGGAGACTGGGAAGAGCAACACAAAGATATTCAGTTGCTTGGTGAGAGCTGCTCTCTGCTTCCAAGGCGGCACCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622852.1 |
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| CDS TCA 90 bp | TGTTCAGTTTTGCTTGTTTCTGTGTCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: CSVLLVSVSFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGACACAGAAACAAGCAAAACTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CCA 90 bp | CTCCAGAACTTTCTCCTTACTGCAAGCTTTCGTAGAGAGGCCTCTTaGTTTTCTTCTGCTACCATCAGGCAAAGCAAACCCCAAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: LQNFLLTASFRREAS*FSSATIRQSKPQIA Trigger: GGCTATTTGGGGTTTGCTTTGCCTGATGGTAGCAGAAGAAAACCAAGAGGCCTCTCTACGAAAGCTTGCAGTAAGGAGAAAGTTCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS CCA 90 bp | CGCCCATGCCCAATTACATCTGTCACAGGTCATGTGGAAGCAGTCTaGGAAGCTGACAATTTTCTGGGGAGATTTCTCAGAATCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RPCPITSVTGHVEAV*EADNFLGRFLRIKS Trigger: AGACTTGATTCTGAGAAATCTCCCCAGAAAATTGTCAGCTTCCCAGACTGCTTCCACATGACCTGTGACAGATGTAATTGGGCATGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601410.5 |
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| CDS CCA 90 bp | GCCGCCTCTGAGGCAGCAGAACCATGTGAGCATGGTTTATGGGAATaGTTTGATGGTTTACTTGGCACTGAATATAGCAGTGAGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AASEAAEPCEHGLWE*FDGLLGTEYSSEFF Trigger: GAAGAACTCACTGCTATATTCAGTGCCAAGTAAACCATCAAACCATTCCCATAAACCATGCTCACATGGTTCTGCTGCCTCAGAGGCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595603.5 |
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| CDS CCA 90 bp | GAACTAGCCGCCTCTGAGGCAGCAGAACCATGTGAGCATGGTTTATaGGAATGGTTTGATGGTTTACTTGGCACTGAATATAGCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ELAASEAAEPCEHGL*EWFDGLLGTEYSSE Trigger: CTCACTGCTATATTCAGTGCCAAGTAAACCATCAAACCATTCCCATAAACCATGCTCACATGGTTCTGCTGCCTCAGAGGCGGCTAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595603.5 |
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| CDS CCA 90 bp | CGCCCATGCCCAATTACATCTGTCACAGGTCATGTGGAAGCAGTCTaGGAAGCTGACAATTTTCTGGGGAGATTTCTCAGAATCAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RPCPITSVTGHVEAV*EADNFLGRFLRIKS Trigger: TGACTTGATTCTGAGAAATCTCCCCAGAAAATTGTCAGCTTCCCAGACTGCTTCCACATGACCTGTGACAGATGTAATTGGGCATGGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659061.1 |
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| CDS CCA 90 bp | ATGAGATTTCTTCCCACATCAGGTTCCCAGATCTCTGCATTAGAATaGCAAGGGATTCACTGGACAGAGATCCTGAGCATACAGAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: MRFLPTSGSQISALE*QGIHWTEILSIQRC Trigger: GCACCTCTGTATGCTCAGGATCTCTGTCCAGTGAATCCCTTGCCATTCTAATGCAGAGATCTGGGAACCTGATGTGGGAAGAAATCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665974.1 |
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| CDS TCA 90 bp | AACTCTCGGAATAACTTCATTACATCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: NSRNNFITSFPPSVM*GPSVPSHWRMQQQG Trigger: ACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGATGTAATGAAGTTATTCCGAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000598903.5 ENST00000630847.2 ENST00000659061.1 ENST00000665974.1 |
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| CDS CCA 90 bp | AAGTCCAATATCAAGGCACTGGCAGATTTGGTGTTGATGAGGGCCTaGTCTCTGTGTTCAGTTTTGCTTGTTTCTGTGTCCTTTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: KSNIKALADLVLMRA*SLCSVLLVSVSFPP Trigger: AGGTGGAAAGGACACAGAAACAAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGATATTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS GCA 90 bp | AGATCTATTGAAGAGAGGAGCTTCCTGCTGGCAGAATTCAGAATGTaGTTCCCCAAAGGAGTGCAATTACATATTCAGCCTCTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSIEERSFLLAEFRM*FPKGVQLHIQPLSQ Trigger: CTGGGAAAGAGGCTGAATATGTAATTGCACTCCTTTGGGGAAGCACATTCTGAATTCTGCCAGCAGGAAGCTCCTCTCTTCAATAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665974.1 |
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| CDS CCA 90 bp | GAAAGTTGGAGGGGTTGGAAGCCTTTTGCCAACATTGTCTTCACCTaGAACTGTTGTAATCTGTGTCTGGTGCATATTTCCCTTCGACTA | + |
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Preference number: 5 (lower is better) Translates to: ESWRGWKPFANIVFT*NCCNLCLVHISLRL Trigger: TAGTCGAAGGGAAATATGCACCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS TCA 90 bp | CCCAATTACATCTGTCACAGGTCATGTGGAAGCAGTCTGGGAAGCTaGCAATTTTCTGGGGAGATTTCTCAGAATCAAGTCTTTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PNYICHRSCGSSLGS*QFSGEISQNQVFLW Trigger: CCAAAGAAAGACTTGATTCTGAGAAATCTCCCCAGAAAATTGTCAGCTTCCCAGACTGCTTCCACATGACCTGTGACAGATGTAATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601410.5 |
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| CDS TCA 90 bp | CAAATTCATCAAGGCTCTGAACTCTCTGTAACAGCAGTTACATTCTaGCTCTCTCATAGTAGGAGGTGGACTTGCAAATCCCAGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QIHQGSELSVTAVTF*LSHSRRWTCKSQSR Trigger: TCTGGACTGGGATTTGCAAGTCCACCTCCTACTATGAGAGAGTCAGAATGTAACTGCTGTTACAGAGAGTTCAGAGCCTTGATGAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594566.5 |
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| CDS TCA 90 bp | ATCCTAAAACTGTGGAGTGTCCTTAACAAAGAAGAGAGGATGCCTTaGGAAGAAGACCAGTCTCCTTGGGCTTCCTTAACCCTGGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: ILKLWSVLNKEERMP*EEDQSPWASLTLVY Trigger: ATAAACCAGGGTTAAGGAAGCCCAAGGAGACTGGTCTTCTTCTCAAGGCATCCTCTCTTCTTTGTTAAGGACACTCCACAGTTTTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS TCA 90 bp | TCAGAGCATATCGTGAATGTATCTGGATGTAGCCCTACCATAAGTTaGGGAGCTTCTGTACTTTTATTTGTGTGGGCAGGATGGACATAC | + |
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Preference number: 5 (lower is better) Translates to: SEHIVNVSGCSPTIS*GASVLLFVWAGWTY Trigger: GTATGTCCATCCTGCCCACACAAATAAAAGTACAGAAGCTCCTCAACTTATGGTAGGGCTACATCCAGATACATTCACGATATGCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601212.5 |
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| CDS GCA 90 bp | CCAGGTCTAATTGTGCTGCTATTTAAGCTGAAGGCAGAAGATGTGTaGTATGATCACATGGGAATCTTGTTCAAAAAGCAGCTTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: PGLIVLLFKLKAEDV*YDHMGILFKKQLPR Trigger: CCTAGGAAGCTGCTTTTTGAACAAGATTCCCATGTGATCATAGCACACATCTTCTGCCTTCAGCTTAAATAGCAGCACAATTAGACCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596263.5 |
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| CDS CCA 90 bp | GAAATTAAGATTCAGAGAAATAAAGTCCTGGTCTCCGAGTATATCTaGTTGGTTTTAGTTGCCTCCCATTCTTGCGCCAAACGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: EIKIQRNKVLVSEYI*LVLVASHSCAKRAS Trigger: AGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAGGACTTTATTTCTCTGAATCTTAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CCA 90 bp | AGAGAGATCATGAATAATTTTAAAGAGAGCTCTTCGGTAGAGAAGTaGACAGGAGCCAAATTGGAGCCAACTTTCCACCTTCTGTCATGT | + |
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Preference number: 5 (lower is better) Translates to: REIMNNFKESSSVEK*TGAKLEPTFHLLSC Trigger: ACATGACAGAAGGTGGAAAGTTGGCTCCAATTTGGCTCCTGTCCACTTCTCTACCGAAGAGCTCTCTTTAAAATTATTCATGATCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601466.5 |
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| CDS TCA 90 bp | ATGGCAACATCATTGCTTTCAGCCAGTCCAAGATCTTGGAATTTCTaGCAAGTCAACTGTGAATGGAATAATTCTTCCCCATCTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: MATSLLSASPRSWNF*QVNCEWNNSSPSVP Trigger: AGGAACAGATGGGGAAGAATTATTCCATTCACAGTTGACTTGTCAGAAATTCCAAGATCTTGGACTGGCTGAAAGCAATGATGTTGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000425050.5 ENST00000595603.5 ENST00000600953.3 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000631100.1 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS TCA 90 bp | AGGGTTGCTAATGTGATAATATTAAGAGGTGAAGCATTTAAGGGGTaGTTGGGTCATGAGGACACAAGAATGGGATTACAAAAGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RVANVIILRGEAFKG*LGHEDTRMGLQKRL Trigger: AAGCCTCTTTTGTAATCCCATTCTTGTGTCCTCATGACCCAATCACCCCTTAAATGCTTCACCTCTTAATATTATCACATTAGCAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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| CDS CCA 90 bp | TGTAGTGCAAGTAACCAATCCTTCAGAATCTACCACCTTCAGTCATaGAGAAGTCTTGATGAAGTTACCCAATCTATAACAATTCTATGC | + |
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Preference number: 5 (lower is better) Translates to: CSASNQSFRIYHLQS*RSLDEVTQSITILC Trigger: GCATAGAATTGTTATAGATTGGGTAACTTCATCAAGACTTCTCCATGACTGAAGGTGGTAGATTCTGAAGGATTGGTTACTTGCACTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600953.3 ENST00000659061.1 |
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| CDS CCA 90 bp | CTTTTGCCAACATTGTCTTCACCTGGAACTGTTGTAATCTGTGTCTaGTGCATATTTCCCTTCGACTATATCCACCTTTATTTTGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LLPTLSSPGTVVICV*CIFPFDYIHLYFVV Trigger: TACAACAAAATAAAGGTGGATATAGTCGAAGGGAAATATGCACCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS GCA 90 bp | TTGCCAACATTGTCTTCACCTGGAACTGTTGTAATCTGTGTCTGGTaGATATTTCCCTTCGACTATATCCACCTTTATTTTGTTGTAATA | + |
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Preference number: 5 (lower is better) Translates to: LPTLSSPGTVVICVW*IFPFDYIHLYFVVI Trigger: TATTACAACAAAATAAAGGTGGATATAGTCGAAGGGAAATATGCACCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS TCA 90 bp | CAGTTACTTTTGCACCAAGCTAGTAATAGTAGCAGTGCTATGGTTTaGATGTGTCTTCTTCAAAACTCAAGGGTTGCTAATGTGATAATA | + |
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Preference number: 5 (lower is better) Translates to: QLLLHQASNSSSAMV*MCLLQNSRVANVII Trigger: TATTATCACATTAGCAACCCTTGAGTTTTGAAGAAGACACATTCAAACCATAGCACTGCTACTATTACTAGCTTGGTGCAAAAGTAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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| CDS CCA 72 bp | GTAGAGGCTGCCCGTTACTGGGCGGGAAGGCATGTCTaGACTTGTCTGGGCACAGCAAAGGCGAGAAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VEAARYWAGRHV*TCLGTAKARSV Trigger: AACACTTCTCGCCTTTGCTGTGCCCAGACAAGTCCAGACATGCCTTCCCGCCCAGTAACGGGCAGCCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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| CDS CCA 72 bp | GGTCAATTAGGTGGGAAGGTAGAGGCTGCCCGTTACTaGGCGGGAAGGCATGTCTGGACTTGTCTGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: GQLGGKVEAARY*AGRHVWTCLGT Trigger: TGTGCCCAGACAAGTCCAGACATGCCTTCCCGCCCAGTAACGGGCAGCCTCTACCTTCCCACCTAATTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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| CDS TCA 72 bp | ATCGCGTCGCCCATGCCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: IASPMPFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGCATGGGCGACGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593666.5 |
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| CDS TCA 72 bp | CCTGCTTGCAGCTGCCGCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: PACSCRFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGCGGCAGCTGCAAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594566.5 |
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| CDS GCA 72 bp | CAGCGTTCCTTCCCATTGGAGAATGCAGCAACAAGGTaGCGCCTTGGAAGCAGAGAGCAGCTCTCACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: QRSFPLENAATR*RLGSREQLSPS Trigger: GCTTGGTGAGAGCTGCTCTCTGCTTCCAAGGCGGCACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000622852.1 ENST00000627225.2 ENST00000629275.2 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS GCA 72 bp | GATGCAAAAAGTCACACTGTGGCATCGCGTCGCCCATaGCCTTTCCACCTTCTGTCATGTGAGGACCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: DAKSHTVASRRP*PFHLLSCEDPA Trigger: CGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGCATGGGCGACGCGATGCCACAGTGTGACTTTTTGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593666.5 |
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| CDS CAA 72 bp | GGCTGCCCGTTACTGGGCGGGAAGGCATGTCTGGACTaGTCTGGGCACAGCAAAGGCGAGAAGTGTTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GCPLLGGKACLD*SGHSKGEKCCL Trigger: TAAACAACACTTCTCGCCTTTGCTGTGCCCAGACAAGTCCAGACATGCCTTCCCGCCCAGTAACGGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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| CDS GCA 72 bp | TCATGTGAGGACCCAGCGTTCCTTCCCATTGGAGAATaGAGCAACAAGGTGCCGCCTTGGAAGCAGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCEDPAFLPIGE*SNKVPPWKQRA Trigger: TGCTCTCTGCTTCCAAGGCGGCACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS CAA 72 bp | ACCTTCTGTCATGTGAGGACCCAGCGTTCCTTCCCATaGGAGAATGCAGCAACAAGGTGCCGCCTTGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TFCHVRTQRSFP*ENAATRCRLGS Trigger: GCTTCCAAGGCGGCACCTTGTTGCTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS CAA 72 bp | CCTTCCCATTGGAGAATGCAGCAACAAGGTGCCGCCTaGGAAGCAGAGAGCAGCTCTCACCAAGCAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSHWRMQQQGAA*EAESSSHQATE Trigger: TTCAGTTGCTTGGTGAGAGCTGCTCTCTGCTTCCAAGGCGGCACCTTGTTGCTGCATTCTCCAATGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 23 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000622852.1 ENST00000627225.2 ENST00000629275.2 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS GCA 72 bp | TCCCATTCTTGCGCCAAACGGGCATCTCTGTTCACATaGAGGGTGCAAAGGATGCTGAGTCCCATGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHSCAKRASLFT*RVQRMLSPMLS Trigger: AGACAACATGGGACTCAGCATCCTTTGCACCCTGCATGTGAACAGAGATGCCCGTTTGGCGCAAGAATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 90 bp | CCTGGTCTCCGAGTATATCTGGTTGGTTTTAGTTGCCTCCCATTCTaGCGCCAAACGGGCATCTCTGTTCACATGCAGGGTGCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGLRVYLVGFSCLPF*RQTGISVHMQGAKD Trigger: ATCCTTTGCACCCTGCATGTGAACAGAGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS TCA 72 bp | AGCCAAATTGGAGCCAACTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQIGANFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGTTGGCTCCAATTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601466.5 |
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| CDS TCA 72 bp | CTATCAGGTCCAGGAATCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSGPGIFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGATTCCTGGACCTGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596263.5 |
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| CDS GCA 72 bp | GATGAGATTTCTTCCCACATCAGGTTCCCAGATCTCTaGCTTTCCACCTTCTGTCATGTGAGGACCCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: DEISSHIRFPDL*LSTFCHVRTQR Trigger: ACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGCAGAGATCTGGGAACCTGATGTGGGAAGAAATCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425050.5 ENST00000654674.1 |
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| CDS GCA 72 bp | ATTGGTTTGTCTCACCCAGATTGGTGGGGACCAGTTTaGTCCAGGTTTGCTGCAGCTATAGAATCCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: IGLSHPDWWGPV*SRFAAAIESRD Trigger: GTCACGGGATTCTATAGCTGCAGCAAACCTGGAGCAAACTGGTCCCCACCAATCTGGGTGAGACAAACCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425050.5 ENST00000597243.5 ENST00000654674.1 |
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| CDS GCA 72 bp | TATTCAGCCTCTTTCCCAGATTGGTGGGGACCAGTTTaGTCCAGGTTTGCTGCAGCTATAGAATCCCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: YSASFPDWWGPV*SRFAAAIESRD Trigger: GTCACGGGATTCTATAGCTGCAGCAAACCTGGAGCAAACTGGTCCCCACCAATCTGGGAAAGAGGCTGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665974.1 |
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| CDS CCA 72 bp | AGGGGTTGGAAGCCTTTTGCCAACATTGTCTTCACCTaGAACTGTTGTAATCTGCTGACGCATAGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGWKPFANIVFT*NCCNLLTHSSR Trigger: GCGGGAGCTATGCGTCAGCAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000631100.1 |
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| CDS CAA 72 bp | GAGAGCTCTTCGGTAGAGAAGTGGACAGGAGCCAAATaGGAGCCAACTTTCCACCTTCTGTCATGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ESSSVEKWTGAK*EPTFHLLSCED Trigger: GTCCTCACATGACAGAAGGTGGAAAGTTGGCTCCAATTTGGCTCCTGTCCACTTCTCTACCGAAGAGCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601466.5 |
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| CDS CAA 72 bp | GAGCCTGGGAAGTCCAATATCAAGGCACTGGCAGATTaGGTGTTGATGAGGGCCTGGTCTCTGTGTTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPGKSNIKALAD*VLMRAWSLCSV Trigger: AACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGATATTGGACTTCCCAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CAA 72 bp | AGAAGAGAGGATGCCTTGAGAAGAAGACCAGTCTCCTaGGGCTTCCTTAACCCTGGTTTATGGCCCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RREDALRRRPVS*GFLNPGLWPMV Trigger: GACCATGGGCCATAAACCAGGGTTAAGGAAGCCCAAGGAGACTGGTCTTCTTCTCAAGGCATCCTCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000601410.5 ENST00000630847.2 |
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| CDS CAA 90 bp | CTGGAGCCTGGGAAGTCCAATATCAAGGCACTGGCAGATTTGGTGTaGATGAGGGCCTGGTCTCTGTGTTCAGTTTTGCTTGTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LEPGKSNIKALADLV*MRAWSLCSVLLVSV Trigger: CACAGAAACAAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGATATTGGACTTCCCAGGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CAA 90 bp | ACGGTTCTGGAGCCTGGGAAGTCCAATATCAAGGCACTGGCAGATTaGGTGTTGATGAGGGCCTGGTCTCTGTGTTCAGTTTTGCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TVLEPGKSNIKALAD*VLMRAWSLCSVLLV Trigger: AACAAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGATATTGGACTTCCCAGGCTCCAGAACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS TCA 72 bp | TTGCTTGTTTCTGTGTCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLVSVSFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGACACAGAAACAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS TCA 72 bp | CTCTCTCCTGCCTCTGAACAAAGCCTTTCGGGCTCGTaGTGTGCTGTCCCAATTGCAGAAATAGTTCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: LSPASEQSLSGS*CAVPIAEIVPL Trigger: TAGTGGAACTATTTCTGCAATTGGGACAGCACATCACGAGCCCGAAAGGCTTTGTTCAGAGGCAGGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS TCA 72 bp | GTTCTGTTTTACAACCCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLFYNPFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGGGTTGTAAAACAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596000.5 |
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| CDS GCA 72 bp | GAGTATATCTGGTTGGTTTTAGTTGCCTCCCATTCTTaGGCCAAACGGGCATCTCTGTTCACATGCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EYIWLVLVASHS*AKRASLFTCRV Trigger: CACCCTGCATGTGAACAGAGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 72 bp | GTGATTTTCAGTCATCATTGGTTTGTCTCACCCAGATaGGTGGGGACCAGTTTGCTCCAGGTTTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VIFSHHWFVSPR*VGTSLLQVCCS Trigger: GCTGCAGCAAACCTGGAGCAAACTGGTCCCCACCAATCTGGGTGAGACAAACCAATGATGACTGAAAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000425050.5 ENST00000597243.5 ENST00000654674.1 |
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| CDS CAA 72 bp | CGAGTATATCTGGTTGGTTTTAGTTGCCTCCCATTCTaGCGCCAAACGGGCATCTCTGTTCACATGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RVYLVGFSCLPF*RQTGISVHMQG Trigger: ACCCTGCATGTGAACAGAGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 72 bp | GCACGTGCTCAGTTAAATTTCCTCCAGCTTTGCAGCTaGTCACCCTGGTCCTCTTGTCTATTCACCGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARAQLNFLQLCS*SPWSSCLFTDC Trigger: ACAGTCGGTGAATAGACAAGAGGACCAGGGTGACAAGCTGCAAAGCTGGAGGAAATTTAACTGAGCACGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS CAA 90 bp | TTAATGGCCGCACGTGCTCAGTTAAATTTCCTCCAGCTTTGCAGCTaGTCACCCTGGTCCTCTTGTCTATTCACCGACTGTTTACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMAARAQLNFLQLCS*SPWSSCLFTDCLPV Trigger: CACAGGTAAACAGTCGGTGAATAGACAAGAGGACCAGGGTGACAAGCTGCAAAGCTGGAGGAAATTTAACTGAGCACGTGCGGCCATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS CAA 90 bp | GGATGTCTTAATGGCCGCACGTGCTCAGTTAAATTTCCTCCAGCTTaGCAGCTTGTCACCCTGGTCCTCTTGTCTATTCACCGACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GCLNGRTCSVKFPPA*QLVTLVLLSIHRLF Trigger: AAACAGTCGGTGAATAGACAAGAGGACCAGGGTGACAAGCTGCAAAGCTGGAGGAAATTTAACTGAGCACGTGCGGCCATTAAGACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS TCA 72 bp | CTGTGGAGTGTCCTTAACAAAGAAGAGAGGATGCCTTaGGAAGAAGACCAGTCTCCTTGGGCTTCCTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: LWSVLNKEERMP*EEDQSPWASLT Trigger: GGTTAAGGAAGCCCAAGGAGACTGGTCTTCTTCTCAAGGCATCCTCTCTTCTTTGTTAAGGACACTCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000601410.5 ENST00000630847.2 |
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| CDS TCA 72 bp | GTCTTCAACAATGCTGGTAGGCATCATCCAATCACTTaGAGGCTCCAGTATCCCTGCCAATTCTCAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VFNNAGRHHPIT*RLQYPCQFSGL Trigger: AAGGCCTGAGAATTGGCAGGGATACTGGAGCCTTCAAGTGATTGGATGATGCCTACCAGCATTGTTGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS CCA 72 bp | ATCAAGGCACTGGCAGATTTGGTGTTGATGAGGGCCTaGTCTCTGTGTTCAGTTTTGCTTGTTTCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IKALADLVLMRA*SLCSVLLVSVS Trigger: GGACACAGAAACAAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CCA 72 bp | GTTGGCAGGGTTAATTTCTTTAGAGCCTTCTTTCCTTaGCTTGTGGATGGCTGCCTTCTCCCTGTGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VGRVNFFRAFFP*LVDGCLLPVSS Trigger: AGAAGACACAGGGAGAAGGCAGCCATCCACAAGCCAAGGAAAGAAGGCTCTAAAGAAATTAACCCTGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597234.5 |
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| CDS CAA 72 bp | GGGAAGTCCAATATCAAGGCACTGGCAGATTTGGTGTaGATGAGGGCCTGGTCTCTGTGTTCAGTTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GKSNIKALADLV*MRAWSLCSVLL Trigger: AAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAAATCTGCCAGTGCCTTGATATTGGACTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CAA 90 bp | AATTTTAAAGAGAGCTCTTCGGTAGAGAAGTGGACAGGAGCCAAATaGGAGCCAACTTTCCACCTTCTGTCATGTGAGGACCCAGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NFKESSSVEKWTGAK*EPTFHLLSCEDPAF Trigger: GAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGTTGGCTCCAATTTGGCTCCTGTCCACTTCTCTACCGAAGAGCTCTCTTTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601466.5 |
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| CDS CAA 90 bp | TGGAAGCAGAGAGCAGCTCTCACCAAGCAACTGAATATCTTTGTGTaGCTCTTCCCAGTCTCCAGAACTTTCTCCTTACTGCAAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WKQRAALTKQLNIFV*LFPVSRTFSLLQAF Trigger: GAAAGCTTGCAGTAAGGAGAAAGTTCTGGAGACTGGGAAGAGCAACACAAAGATATTCAGTTGCTTGGTGAGAGCTGCTCTCTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS GCA 72 bp | GAAGAGAGGAGCTTCCTGCTGGCAGAATTCAGAATGTaGTTCCCCAAAGGAGTGCAATTACATATTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EERSFLLAEFRM*FPKGVQLHIQP Trigger: AGGCTGAATATGTAATTGCACTCCTTTGGGGAAGCACATTCTGAATTCTGCCAGCAGGAAGCTCCTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665974.1 |
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| CDS CAA 72 bp | TTGGTGTTGATGAGGGCCTGGTCTCTGTGTTCAGTTTaGCTTGTTTCTGTGTCCTTTCCACCTTCTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVLMRAWSLCSV*LVSVSFPPSVM Trigger: CATGACAGAAGGTGGAAAGGACACAGAAACAAGCAAAACTGAACACAGAGACCAGGCCCTCATCAACACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594427.5 |
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| CDS CAA 72 bp | AAGGCAGAAGATGTGTGCTATGATCACATGGGAATCTaGTTCAAAAAGCAGCTTCCTAGGCCCCAACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KAEDVCYDHMGI*FKKQLPRPQLQ Trigger: CTGGAGTTGGGGCCTAGGAAGCTGCTTTTTGAACAAGATTCCCATGTGATCATAGCACACATCTTCTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596263.5 |
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| CDS CAA 72 bp | CAGAGAAATAAAGTCCTGGTCTCCGAGTATATCTGGTaGGTTTTAGTTGCCTCCCATTCTTGCGCCAAACGG | + |
|
Preference number: 6 (lower is better) Translates to: QRNKVLVSEYIW*VLVASHSCAKR Trigger: CCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAGGACTTTATTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 72 bp | CAGAAAGTTGGAGGGGTTGGAAGCCTTTTGCCAACATaGTCTTCACCTGGAACTGTTGTAATCTGTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QKVGGVGSLLPT*SSPGTVVICVW Trigger: CCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS CAA 90 bp | CCAACATTGTCTTCACCTGGAACTGTTGTAATCCAAACGAATGATTaGATTAGCGCACAGAAGGATGTCTTAATGGCCGCACGTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTLSSPGTVVIQTND*ISAQKDVLMAARAQ Trigger: CTGAGCACGTGCGGCCATTAAGACATCCTTCTGTGCGCTAATCAAATCATTCGTTTGGATTACAACAGTTCCAGGTGAAGACAATGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS TCA 72 bp | AGTTTGCTCCAGGTTTGCTGCAGCTATAGAATCCCGTaGCTCCTGACAAAATCGTGGTCACAGATGAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: SLLQVCCSYRIP*LLTKSWSQMRF Trigger: AAATCTCATCTGTGACCACGATTTTGTCAGGAGTCACGGGATTCTATAGCTGCAGCAAACCTGGAGCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000425050.5 ENST00000594427.5 ENST00000597243.5 ENST00000654674.1 ENST00000665974.1 |
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| CDS TCA 72 bp | ATCTGTCACAGGTCATGTGGAAGCAGTCTGGGAAGCTaGCAATTTTCTGGGGAGATTTCTCAGAATCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICHRSCGSSLGS*QFSGEISQNQV Trigger: GACTTGATTCTGAGAAATCTCCCCAGAAAATTGTCAGCTTCCCAGACTGCTTCCACATGACCTGTGACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000601410.5 ENST00000659061.1 |
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| CDS TCA 72 bp | AATAACTTCATTACATCCTTTCCACCTTCTGTCATGTaGGGACCCAGCGTTCCTTCCCATTGGAGAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NNFITSFPPSVM*GPSVPSHWRMQ Trigger: CTGCATTCTCCAATGGGAAGGAACGCTGGGTCCTCACATGACAGAAGGTGGAAAGGATGTAATGAAGTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000598903.5 ENST00000630847.2 ENST00000659061.1 ENST00000665974.1 |
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| CDS GCA 72 bp | ACAAAGCCTTTCGGGCTCGTGATGTGCTGTCCCAATTaGAGAAATAGTTCCACTATCAACCTGCTACATCAT | + |
|
Preference number: 6 (lower is better) Translates to: TKPFGLVMCCPN*RNSSTINLLHH Trigger: ATGATGTAGCAGGTTGATAGTGGAACTATTTCTGCAATTGGGACAGCACATCACGAGCCCGAAAGGCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS CCA 72 bp | ATACCATCAGCTTTCCTGGTGTTTCAGCTTACAGAGTaGGAGCTCTCAGCCTCACAGTTGGAGAGATATAAA | + |
|
Preference number: 6 (lower is better) Translates to: IPSAFLVFQLTE*ELSASQLERYK Trigger: TTTATATCTCTCCAACTGTGAGGCTGAGAGCTCCCACTCTGTAAGCTGAAACACCAGGAAAGCTGATGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS CCA 72 bp | ATGCTTTCATTCTTCAGGTCAGAAAGTTGGAGGGGTTaGAAGCCTTTTGCCAACATTGTCTTCACCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: MLSFFRSESWRG*KPFANIVFTWN Trigger: GTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTGACCTGAAGAATGAAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000600953.3 ENST00000627225.2 ENST00000629275.2 ENST00000631100.1 |
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| CDS CCA 72 bp | AGGGGTTGGAAGCCTTTTGCCAACATTGTCTTCACCTaGAACTGTTGTAATCTGTGTCTGGTGCATATTTCC | + |
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Preference number: 6 (lower is better) Translates to: RGWKPFANIVFT*NCCNLCLVHIS Trigger: GGAAATATGCACCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS CAA 72 bp | AGAGCAGCTCTCACCAAGCAACTGAATATCTTTGTGTaGCTCTTCCCAGTCTCCAGAACTTTCTCCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: RAALTKQLNIFV*LFPVSRTFSLL Trigger: CAGTAAGGAGAAAGTTCTGGAGACTGGGAAGAGCAACACAAAGATATTCAGTTGCTTGGTGAGAGCTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000425050.5 ENST00000593666.5 ENST00000594427.5 ENST00000594566.5 ENST00000595603.5 ENST00000596000.5 ENST00000596263.5 ENST00000597234.5 ENST00000597243.5 ENST00000598903.5 ENST00000601212.5 ENST00000601410.5 ENST00000601466.5 ENST00000601505.5 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000630847.2 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS CAA 72 bp | GCCTCACAGTTGGAGAGATATAAATGGATTGTTCTCTaGAAGGGAGCTTCAGACCAACCTTCCTCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: ASQLERYKWIVL*KGASDQPSSSF Trigger: GAATGAGGAGGAAGGTTGGTCTGAAGCTCCCTTCAAGAGAACAATCCATTTATATCTCTCCAACTGTGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS CAA 72 bp | TCTTCAGGTCAGAAAGTTGGAGGGGTTGGAAGCCTTTaGCCAACATTGTCTTCACCTGGAACTGTTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: SSGQKVGGVGSL*PTLSSPGTVVI Trigger: GATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTGACCTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627225.2 ENST00000629275.2 ENST00000631100.1 |
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| CDS CAA 72 bp | AGAGCAGCTCTCACCAAGCAACTGAATATCTTTGTGTaGCTCTTCCCAGTCTCCAGAACATGTATTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RAALTKQLNIFV*LFPVSRTCIVV Trigger: CACCACAATACATGTTCTGGAGACTGGGAAGAGCAACACAAAGATATTCAGTTGCTTGGTGAGAGCTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622852.1 |
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| CDS CAA 90 bp | TTTAAGCTGAAGGCAGAAGATGTGTGCTATGATCACATGGGAATCTaGTTCAAAAAGCAGCTTCCTAGGCCCCAACTCCAGACCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FKLKAEDVCYDHMGI*FKKQLPRPQLQTFF Trigger: AAAGAAGGTCTGGAGTTGGGGCCTAGGAAGCTGCTTTTTGAACAAGATTCCCATGTGATCATAGCACACATCTTCTGCCTTCAGCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596263.5 |
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| CDS CAA 90 bp | ATTAAGATTCAGAGAAATAAAGTCCTGGTCTCCGAGTATATCTGGTaGGTTTTAGTTGCCTCCCATTCTTGCGCCAAACGGGCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IKIQRNKVLVSEYIW*VLVASHSCAKRASL Trigger: CAGAGATGCCCGTTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAGGACTTTATTTCTCTGAATCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 90 bp | TCTTCAGGTCAGAAAGTTGGAGGGGTTGGAAGCCTTTTGCCAACATaGTCTTCACCTGGAACTGTTGTAATCTGTGTCTGGTGCATATTT | + |
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Preference number: 6 (lower is better) Translates to: SSGQKVGGVGSLLPT*SSPGTVVICVWCIF Trigger: AAATATGCACCAGACACAGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTGACCTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629275.2 |
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| CDS CCA 72 bp | AGAGACAGAATGCTTTCATTCTTCAGGTCAGAAAGTTaGAGGGGTTGGAAGCCTTTTGCCAACATTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RDRMLSFFRSES*RGWKPFANIVF Trigger: GAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTGACCTGAAGAATGAAAGCATTCTGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000600953.3 ENST00000627225.2 ENST00000629275.2 ENST00000631100.1 |
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| CDS CCA 72 bp | GAGGCAGCAGAACCATGTGAGCATGGTTTATGGGAATaGTTTGATGGTTTACTTGGCACTGAATATAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: EAAEPCEHGLWE*FDGLLGTEYSS Trigger: ACTGCTATATTCAGTGCCAAGTAAACCATCAAACCATTCCCATAAACCATGCTCACATGGTTCTGCTGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595603.5 |
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| CDS CAA 72 bp | TTTCAGCTTACAGAGTGGGAGCTCTCAGCCTCACAGTaGGAGAGATATAAATGGATTGTTCTCTTGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: FQLTEWELSASQ*ERYKWIVLLKG Trigger: TCCCTTCAAGAGAACAATCCATTTATATCTCTCCAACTGTGAGGCTGAGAGCTCCCACTCTGTAAGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS CAA 72 bp | CAGAAAGTTGGAGGGGTTGGAAGCCTTTTGCCAACATaGTCTTCACCTGGAACTGTTGTAATCCAAACGAAT | + |
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Preference number: 6 (lower is better) Translates to: QKVGGVGSLLPT*SSPGTVVIQTN Trigger: ATTCGTTTGGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS CAA 72 bp | TCCCAGTCTCCAGAACATGTATTGTGGTGTCACACATaGTGCCAAGGGCTTTGCAAGATGATCTCTTATCTA | + |
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Preference number: 6 (lower is better) Translates to: SQSPEHVLWCHT*CQGLCKMISYL Trigger: TAGATAAGAGATCATCTTGCAAAGCCCTTGGCACAATGTGTGACACCACAATACATGTTCTGGAGACTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622852.1 |
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| CDS CAA 90 bp | ACTTCAGAGGTCTCTCCCTGTGTAATCCTAGATAAGCACAGGGCATaGATTTATACTGTGTCTTCATCCTCTGCCATGGAGAAACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: TSEVSPCVILDKHRA*IYTVSSSSAMEKQN Trigger: GTTTTGTTTCTCCATGGCAGAGGATGAAGACACAGTATAAATCAATGCCCTGTGCTTATCTAGGATTACACAGGGAGAGACCTCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596263.5 |
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| CDS TCA 72 bp | ATCGTGAATGTATCTGGATGTAGCCCTACCATAAGTTaGGGAGCTTCTGTACTTTTATTTGTGTGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: IVNVSGCSPTIS*GASVLLFVWAG Trigger: TCCTGCCCACACAAATAAAAGTACAGAAGCTCCTCAACTTATGGTAGGGCTACATCCAGATACATTCACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601212.5 |
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| CDS GCA 72 bp | GATGAGATTTCTTCCCACATCAGGTTCCCAGATCTCTaGCTATCCTTCTTACTAATTCCCAAACCTCATCTA | + |
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Preference number: 6 (lower is better) Translates to: DEISSHIRFPDL*LSFLLIPKPHL Trigger: TAGATGAGGTTTGGGAATTAGTAAGAAGGATAGGCAGAGATCTGGGAACCTGATGTGGGAAGAAATCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594427.5 ENST00000597243.5 |
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| CDS GCA 72 bp | GTCTTCCACATCTATTCCTTCCACAAAGTTTCCCCTTaGACTCTTAGTCCTTGCCTCAAAGAAGTTAACAGA | + |
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Preference number: 6 (lower is better) Translates to: VFHIYSFHKVSP*TLSPCLKEVNR Trigger: TCTGTTAACTTCTTTGAGGCAAGGACTAAGAGTGCAAGGGGAAACTTTGTGGAAGGAATAGATGTGGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594566.5 |
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| CDS CCA 72 bp | ATTCAGAGAAATAAAGTCCTGGTCTCCGAGTATATCTaGTTGGTTTTAGTTGCCTCCCATTCTTGCGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IQRNKVLVSEYI*LVLVASHSCAK Trigger: TTTGGCGCAAGAATGGGAGGCAACTAAAACCAACCAGATATACTCGGAGACCAGGACTTTATTTCTCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630847.2 |
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| CDS CAA 72 bp | TCTTCACCTGGAACTGTTGTAATCCAAACGAATGATTaGATTAGCGCACAGAAGGATGTCTTAATGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSPGTVVIQTND*ISAQKDVLMAA Trigger: TGCGGCCATTAAGACATCCTTCTGTGCGCTAATCAAATCATTCGTTTGGATTACAACAGTTCCAGGTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS CAA 72 bp | ACATGTATTGTGGTGTCACACATTGTGCCAAGGGCTTaGCAAGATGATCTCTTATCTAAGCACGTAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TCIVVSHIVPRA*QDDLLSKHVEN Trigger: GTTCTCTACGTGCTTAGATAAGAGATCATCTTGCAAAGCCCTTGGCACAATGTGTGACACCACAATACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622852.1 |
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| CDS CAA 90 bp | TCTTCAGGTCAGAAAGTTGGAGGGGTTGGAAGCCTTTTGCCAACATaGTCTTCACCTGGAACTGTTGTAATCCAAACGAATGATTTGATT | + |
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Preference number: 6 (lower is better) Translates to: SSGQKVGGVGSLLPT*SSPGTVVIQTNDLI Trigger: AATCAAATCATTCGTTTGGATTACAACAGTTCCAGGTGAAGACAATGTTGGCAAAAGGCTTCCAACCCCTCCAACTTTCTGACCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627225.2 |
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| CDS CCA 72 bp | ATGAATAATTTTAAAGAGAGCTCTTCGGTAGAGAAGTaGACAGGAGCCAAATTGGAGCCAACTTTCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: MNNFKESSSVEK*TGAKLEPTFHL Trigger: AAGGTGGAAAGTTGGCTCCAATTTGGCTCCTGTCCACTTCTCTACCGAAGAGCTCTCTTTAAAATTATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601466.5 |
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| CDS CCA 72 bp | TGGTCCAGATCCTTCAGAATCTACCACCTTCAGTCATaGAGAAGTCTTGATGAAGTTACCCAATCTATAACA | + |
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Preference number: 6 (lower is better) Translates to: WSRSFRIYHLQS*RSLDEVTQSIT Trigger: TGTTATAGATTGGGTAACTTCATCAAGACTTCTCCATGACTGAAGGTGGTAGATTCTGAAGGATCTGGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000631100.1 |
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| CDS TCA 72 bp | TCATTGCTTTCAGCCAGTCCAAGATCTTGGAATTTCTaGCAAGTCAACTGTGAATGGAATAATTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLLSASPRSWNF*QVNCEWNNSSP Trigger: TGGGGAAGAATTATTCCATTCACAGTTGACTTGTCAGAAATTCCAAGATCTTGGACTGGCTGAAAGCAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000425050.5 ENST00000595603.5 ENST00000600953.3 ENST00000607995.5 ENST00000627225.2 ENST00000629275.2 ENST00000631100.1 ENST00000654674.1 ENST00000656439.1 ENST00000659061.1 ENST00000665974.1 |
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| CDS TCA 72 bp | ACAAAGGTCTATCTAACTCCAAATTCATCAAGGCTCTaGACTCTCTGTAACAGCAGTTACATTCTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: TKVYLTPNSSRL*TLCNSSYILTL Trigger: GAGAGTCAGAATGTAACTGCTGTTACAGAGAGTTCAGAGCCTTGATGAATTTGGAGTTAGATAGACCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594566.5 |
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| CDS TCA 72 bp | GGGGTCTTAACAGACAATGATTTCTGGGTGTATCTGTaGTGGCTTTTCTGGCAGAGATTAACATTTGAATTG | + |
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Preference number: 6 (lower is better) Translates to: GVLTDNDFWVYL*WLFWQRLTFEL Trigger: CAATTCAAATGTTAATCTCTGCCAGAAAAGCCATCACAGATACACCCAGAAATCATTGTCTGTTAAGACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS TCA 72 bp | CTTTTCTGGCAGAGATTAACATTTGAATTGATAGACTaGGTGAAGAAGGTTGTCTTCAACAATGCTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LFWQRLTFELID*VKKVVFNNAGR Trigger: CCTACCAGCATTGTTGAAGACAACCTTCTTCACTCAGTCTATCAATTCAAATGTTAATCTCTGCCAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607995.5 |
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| CDS TCA 72 bp | AATGTGATAATATTAAGAGGTGAAGCATTTAAGGGGTaGTTGGGTCATGAGGACACAAGAATGGGATTACAA | + |
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Preference number: 6 (lower is better) Translates to: NVIILRGEAFKG*LGHEDTRMGLQ Trigger: TTGTAATCCCATTCTTGTGTCCTCATGACCCAATCACCCCTTAAATGCTTCACCTCTTAATATTATCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601505.5 |
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