Pregenerated sensors for LINC01429 (Homo sapiens)
Ensembl gene IDs: ENSG00000227964Ensembl transcript IDs: ENST00000438154.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCCTCTATTGCGCTGCCATGCCTGGCACGTTGCTCCCATCCCCATaGTCCAAGGGTCCTCTCCTCCACATCCCCATCCAGCCAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TLYCAAMPGTLLPSP*SKGPLLHIPIQPAE Trigger: TTCTGCTGGCTGGATGGGGATGTGGAGGAGAGGACCCTTGGACCATGGGGATGGGAGCAACGTGCCAGGCATGGCAGCGCAATAGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 90 bp | AGTGGGAGATGGGAGGGCCAAGGTGGGGCTGGGCTATTAACTCCCTaGCTGGCCATGGTCTGGCAGTGGCTGTGTCCCTCTACTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: SGRWEGQGGAGLLTP*LAMVWQWLCPSTET Trigger: GGTTTCAGTAGAGGGACACAGCCACTGCCAGACCATGGCCAGCCAGGGAGTTAATAGCCCAGCCCCACCTTGGCCCTCCCATCTCCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 90 bp | TCAGCCAATAAGGAGGAGTGGGAGATGGGAGGGCCAAGGTGGGGCTaGGCTATTAACTCCCTGGCTGGCCATGGTCTGGCAGTGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SANKEEWEMGGPRWG*AINSLAGHGLAVAV Trigger: CACAGCCACTGCCAGACCATGGCCAGCCAGGGAGTTAATAGCCCAGCCCCACCTTGGCCCTCCCATCTCCCACTCCTCCTTATTGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 90 bp | CATCTGGTTTCTTGCTGGGTTCAGCCAATAAGGAGGAGTGGGAGATaGGAGGGCCAAGGTGGGGCTGGGCTATTAACTCCCTGGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: HLVSCWVQPIRRSGR*EGQGGAGLLTPWLA Trigger: GGCCAGCCAGGGAGTTAATAGCCCAGCCCCACCTTGGCCCTCCCATCTCCCACTCCTCCTTATTGGCTGAACCCAGCAAGAAACCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 90 bp | TGTGCCCAAGAGGCCGGGCAGTGGGGACCACATCTCCTGGTTCTGTaGCATCTGGTTTCTTGCTGGGTTCAGCCAATAAGGAGGAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CAQEAGQWGPHLLVL*HLVSCWVQPIRRSG Trigger: CCCACTCCTCCTTATTGGCTGAACCCAGCAAGAAACCAGATGTCACAGAACCAGGAGATGTGGTCCCCACTGCCCGGCCTCTTGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 90 bp | GGTCTGAGCTCTTCAAAAGATGTTCCACCCTCTATTGCGCTGCCATaGCTGGCACGTTGCTCCCATCCCCATGGTCCAAGGGTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLSSSKDVPPSIALP*LARCSHPHGPRVLS Trigger: GGAGAGGACCCTTGGACCATGGGGATGGGAGCAACGTGCCAGGCATGGCAGCGCAATAGAGGGTGGAACATCTTTTGAAGAGCTCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 90 bp | AGAGCAGAGGCCGACATCCATGAGTTTAAATCCAGGTTGTGTCACTaGAGGCTGCAAAGCTCATTAAGATCAGGGGTCCAGGGTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: RAEADIHEFKSRLCH*RLQSSLRSGVQGLS Trigger: GCTCAGACCCTGGACCCCTGATCTTAATGAGCTTTGCAGCCTTCAGTGACACAACCTGGATTTAAACTCATGGATGTCGGCCTCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 90 bp | GACGCTCTGCAGGTCGTGAGATGTGCCTTTTGTCCTGACGTCAGCTaGGAGCAGATCTTTGGAAGGATTTGCCCATTGAGCACATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: DALQVVRCAFCPDVS*EQIFGRICPLSTFA Trigger: AGCAAATGTGCTCAATGGGCAAATCCTTCCAAAGATCTGCTCTCAGCTGACGTCAGGACAAAAGGCACATCTCACGACCTGCAGAGCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 90 bp | ACACATTCTGAGGTGCTGGGTCTCAGAGCTCCAACATCTCCTTTTTaGGAGGATACAATTCAACGCAGAGCAGAGGCCGACATCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: THSEVLGLRAPTSPF*EDTIQRRAEADIHE Trigger: CTCATGGATGTCGGCCTCTGCTCTGCGTTGAATTGTATCCTCCCAAAAAGGAGATGTTGGAGCTCTGAGACCCAGCACCTCAGAATGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 90 bp | AATAGGGTCTTGGTAAAGACCCTATTTCCAAGTAGAAACACATTCTaGGGTGCTGGGTCTCAGAGCTCCAACATCTCCTTTTTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: NRVLVKTLFPSRNTF*GAGSQSSNISFLGG Trigger: TCCTCCCAAAAAGGAGATGTTGGAGCTCTGAGACCCAGCACCTCAGAATGTGTTTCTACTTGGAAATAGGGTCTTTACCAAGACCCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 90 bp | ACATTTTTAAGATCCACTGACAGCTTGTACATTCTGGAAGCCATGTaGGTCAGGGGGATGAATTTATTGGCTTTAACGTCAGACGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TFLRSTDSLYILEAM*VRGMNLLALTSDAL Trigger: CAGAGCGTCTGACGTTAAAGCCAATAAATTCATCCCCCTGACCCACATGGCTTCCAGAATGTACAAGCTGTCAGTGGATCTTAAAAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 90 bp | TTAATGTCTCAGAAAAGTCAGATTGGAAGTTGCATGCACAATTCCTaGCGGAACAAAGTACAGCCATCTCCCTGCACTAATGCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LMSQKSQIGSCMHNS*RNKVQPSPCTNAFP Trigger: TGGAAATGCATTAGTGCAGGGAGATGGCTGTACTTTGTTCCGGCAGGAATTGTGCATGCAACTTCCAATCTGACTTTTCTGAGACATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 90 bp | ACGCATGTGTTTTTATTAATGTCTCAGAAAAGTCAGATTGGAAGTTaGATGCACAATTCCTGCCGGAACAAAGTACAGCCATCTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: THVFLLMSQKSQIGS*MHNSCRNKVQPSPC Trigger: GCAGGGAGATGGCTGTACTTTGTTCCGGCAGGAATTGTGCATGCAACTTCCAATCTGACTTTTCTGAGACATTAATAAAAACACATGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | TGGGAGGGCCAAGGTGGGGCTGGGCTATTAACTCCCTaGCTGGCCATGGTCTGGCAGTGGCTGTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: WEGQGGAGLLTP*LAMVWQWLCPS Trigger: AGAGGGACACAGCCACTGCCAGACCATGGCCAGCCAGGGAGTTAATAGCCCAGCCCCACCTTGGCCCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 72 bp | GTTCCACCCTCTATTGCGCTGCCATGCCTGGCACGTTaGTCCCATCCCCATGGTCCAAGGGTCCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPPSIALPCLAR*SHPHGPRVLSS Trigger: GGAGGAGAGGACCCTTGGACCATGGGGATGGGAGCAACGTGCCAGGCATGGCAGCGCAATAGAGGGTGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | GCTGGCCATGGTCTGGCAGTGGCTGTGTCCCTCTACTaGAACCCACAGCTCCCATGGGGTGGCCTTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: AGHGLAVAVSLY*NPQLPWGGLFP Trigger: AGGAAAAAGGCCACCCCATGGGAGCTGTGGGTTTCAGTAGAGGGACACAGCCACTGCCAGACCATGGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | GTGCCCAAGAGGCCGGGCAGTGGGGACCACATCTCCTaGTTCTGTGACATCTGGTTTCTTGCTGGGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VPKRPGSGDHIS*FCDIWFLAGFS Trigger: GCTGAACCCAGCAAGAAACCAGATGTCACAGAACCAGGAGATGTGGTCCCCACTGCCCGGCCTCTTGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | CTGCTGCCTTTGGAGGCCTTGGAGAGGGAAGGGCTTTaGGTTGTTGGTAGCCCCGGGGTGCTTCATCAACCC | + |
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Preference number: 6 (lower is better) Translates to: LLPLEALEREGL*VVGSPGVLHQP Trigger: GGGTTGATGAAGCACCCCGGGGCTACCAACAACCAAAAGCCCTTCCCTCTCCAAGGCCTCCAAAGGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 90 bp | CGGGCAGTGGGGACCACATCTCCTGGTTCTGTGACATCTGGTTTCTaGCTGGGTTCAGCCAATAAGGAGGAGTGGGAGATGGGAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RAVGTTSPGSVTSGF*LGSANKEEWEMGGP Trigger: TGGCCCTCCCATCTCCCACTCCTCCTTATTGGCTGAACCCAGCAAGAAACCAGATGTCACAGAACCAGGAGATGTGGTCCCCACTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | GGGCTATTAACTCCCTGGCTGGCCATGGTCTGGCAGTaGCTGTGTCCCTCTACTGAAACCCACAGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GLLTPWLAMVWQ*LCPSTETHSSH Trigger: ATGGGAGCTGTGGGTTTCAGTAGAGGGACACAGCCACTGCCAGACCATGGCCAGCCAGGGAGTTAATAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | AGGATCTGTGCCAGGCCTCTCTCCTTGGCTCGTAGATaGCCGTCTTCTCCCTGTGACTCTGCCGTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RICARPLSLARR*PSSPCDSAVIF Trigger: GAAGATGACGGCAGAGTCACAGGGAGAAGACGGTCATCTACGAGCCAAGGAGAGAGGCCTGGCACAGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 72 bp | GGGTCTGAGCTCTTCAAAAGATGTTCCACCCTCTATTaGGCTGCCATGCCTGGCACGTTGCTCCCATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSELFKRCSTLY*AAMPGTLLPSP Trigger: TGGGGATGGGAGCAACGTGCCAGGCATGGCAGCGCAATAGAGGGTGGAACATCTTTTGAAGAGCTCAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 72 bp | TCTTCAAAAGATGTTCCACCCTCTATTGCGCTGCCATaGCTGGCACGTTGCTCCCATCCCCATGGTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSKDVPPSIALP*LARCSHPHGPR Trigger: CCTTGGACCATGGGGATGGGAGCAACGTGCCAGGCATGGCAGCGCAATAGAGGGTGGAACATCTTTTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | AGCCACAGACGGAGCGGCTTACACAGCACAGATGTATaGTCTGAAGGCTCTCTGGGTGCTGTGAGGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SHRRSGLHSTDV*SEGSLGAVREG Trigger: TCCTTCCCTCACAGCACCCAGAGAGCCTTCAGACAATACATCTGTGCTGTGTAAGCCGCTCCGTCTGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | CAGACGGAGCGGCTTACACAGCACAGATGTATTGTCTaGAGGCTCTCTGGGTGCTGTGAGGGAAGGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: QTERLTQHRCIV*RLSGCCEGRIC Trigger: ACAGATCCTTCCCTCACAGCACCCAGAGAGCCTTCAGACAATACATCTGTGCTGTGTAAGCCGCTCCGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | GAGGTGCTGGGTCTCAGAGCTCCAACATCTCCTTTTTaGGAGGATACAATTCAACGCAGAGCAGAGGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: EVLGLRAPTSPF*EDTIQRRAEAD Trigger: GTCGGCCTCTGCTCTGCGTTGAATTGTATCCTCCCAAAAAGGAGATGTTGGAGCTCTGAGACCCAGCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 90 bp | CTATGGATCTTGCCATTTTCTGATAACCACTCCCTCCTGCTGCCTTaGGAGGCCTTGGAGAGGGAAGGGCTTTTGGTTGTTGGTAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LWILPFSDNHSLLLP*EALEREGLLVVGSP Trigger: GGGGCTACCAACAACCAAAAGCCCTTCCCTCTCCAAGGCCTCCAAAGGCAGCAGGAGGGAGTGGTTATCAGAAAATGGCAAGATCCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | TGCCATTTTCTGATAACCACTCCCTCCTGCTGCCTTTaGAGGCCTTGGAGAGGGAAGGGCTTTTGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: CHFLITTPSCCL*RPWRGKGFWLL Trigger: CAACAACCAAAAGCCCTTCCCTCTCCAAGGCCTCCAAAGGCAGCAGGAGGGAGTGGTTATCAGAAAATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | CAGGTCGTGAGATGTGCCTTTTGTCCTGACGTCAGCTaGGAGCAGATCTTTGGAAGGATTTGCCCATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: QVVRCAFCPDVS*EQIFGRICPLS Trigger: GCTCAATGGGCAAATCCTTCCAAAGATCTGCTCTCAGCTGACGTCAGGACAAAAGGCACATCTCACGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS GCA 72 bp | TATGGATCTTGCCATTTTCTGATAACCACTCCCTCCTaGTGCCTTTGGAGGCCTTGGAGAGGGAAGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YGSCHFLITTPS*CLWRPWRGKGF Trigger: AAAGCCCTTCCCTCTCCAAGGCCTCCAAAGGCAGCAGGAGGGAGTGGTTATCAGAAAATGGCAAGATCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | TTGCCATTTTCTGATAACCACTCCCTCCTGCTGCCTTaGGAGGCCTTGGAGAGGGAAGGGCTTTTGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LPFSDNHSLLLP*EALEREGLLVV Trigger: AACAACCAAAAGCCCTTCCCTCTCCAAGGCCTCCAAAGGCAGCAGGAGGGAGTGGTTATCAGAAAATGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | ATTCTGGAAGCCATGTGGGTCAGGGGGATGAATTTATaGGCTTTAACGTCAGACGCTCTGCAGGTCGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ILEAMWVRGMNL*ALTSDALQVVR Trigger: TCTCACGACCTGCAGAGCGTCTGACGTTAAAGCCAATAAATTCATCCCCCTGACCCACATGGCTTCCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 90 bp | AGCTTGTACATTCTGGAAGCCATGTGGGTCAGGGGGATGAATTTATaGGCTTTAACGTCAGACGCTCTGCAGGTCGTGAGATGTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLYILEAMWVRGMNL*ALTSDALQVVRCAF Trigger: AAAGGCACATCTCACGACCTGCAGAGCGTCTGACGTTAAAGCCAATAAATTCATCCCCCTGACCCACATGGCTTCCAGAATGTACAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | GCCGACATCCATGAGTTTAAATCCAGGTTGTGTCACTaGAGGCTGCAAAGCTCATTAAGATCAGGGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ADIHEFKSRLCH*RLQSSLRSGVQ Trigger: CTGGACCCCTGATCTTAATGAGCTTTGCAGCCTTCAGTGACACAACCTGGATTTAAACTCATGGATGTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CCA 72 bp | AGATCCACTGACAGCTTGTACATTCTGGAAGCCATGTaGGTCAGGGGGATGAATTTATTGGCTTTAACGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSTDSLYILEAM*VRGMNLLALTS Trigger: TGACGTTAAAGCCAATAAATTCATCCCCCTGACCCACATGGCTTCCAGAATGTACAAGCTGTCAGTGGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | TCTCCCACAGGTCACCAGTCCTATTGGAATAGGGTCTaGGTAAAGACCCTATTTCCAAGTAGAAACACATTC | + |
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Preference number: 6 (lower is better) Translates to: SPTGHQSYWNRV*VKTLFPSRNTF Trigger: GAATGTGTTTCTACTTGGAAATAGGGTCTTTACCAAGACCCTATTCCAATAGGACTGGTGACCTGTGGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 90 bp | GACGCATGTGTTTTTATTAATGTCTCAGAAAAGTCAGATTGGAAGTaGCATGCACAATTCCTGCCGGAACAAAGTACAGCCATCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DACVFINVSEKSDWK*HAQFLPEQSTAISL Trigger: CAGGGAGATGGCTGTACTTTGTTCCGGCAGGAATTGTGCATGCAACTTCCAATCTGACTTTTCTGAGACATTAATAAAAACACATGCGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 90 bp | GGTGCTTCATCAACCCTGCTGATTTCTCTATACCTTGCTTATATCTaGGTAAATACCCCTTTTATTAAACATTCCTCAGCCGGACATGGT | + |
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Preference number: 6 (lower is better) Translates to: GASSTLLISLYLAYI*VNTPFIKHSSAGHG Trigger: ACCATGTCCGGCTGAGGAATGTTTAATAAAAGGGGTATTTACCAAGATATAAGCAAGGTATAGAGAAATCAGCAGGGTTGATGAAGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS CAA 72 bp | GTTTTTATTAATGTCTCAGAAAAGTCAGATTGGAAGTaGCATGCACAATTCCTGCCGGAACAAAGTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VFINVSEKSDWK*HAQFLPEQSTA Trigger: GGCTGTACTTTGTTCCGGCAGGAATTGTGCATGCAACTTCCAATCTGACTTTTCTGAGACATTAATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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| CDS TCA 72 bp | TTTCACATACCTCATACTAAATATGCAAGCTACACATaGCCTCTACCATCCAGAAATACCTGTTTTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FHIPHTKYASYT*PLPSRNTCFSS Trigger: GCTGCTAAAACAGGTATTTCTGGATGGTAGAGGTCATGTGTAGCTTGCATATTTAGTATGAGGTATGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438154.1 |
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