Pregenerated sensors for LINC01427 (Homo sapiens)
Ensembl gene IDs: ENSG00000225321Ensembl transcript IDs: ENST00000420928.1, ENST00000635258.1, ENST00000635277.1, ENST00000635299.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGAGCTCAGTACCTGCCCAGCTCCTCCGTGGGCACCGAGGTGCTTaGCAGCCATGCGAAGCTGTGGAGCAGACCGATGAGGAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ESSVPAQLLRGHRGA*QPCEAVEQTDEEVE Trigger: CTCCACCTCCTCATCGGTCTGCTCCACAGCTTCGCATGGCTGGCAAGCACCTCGGTGCCCACGGAGGAGCTGGGCAGGTACTGAGCTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 90 bp | ACCGTGGGCTTAGGGTCGCATGGACCAGGTTGTAATCCAGCTCAGTaGTTCACCAACTGGATGGCCTTGCAGAGAGCTCAGTACCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TVGLGSHGPGCNPAQ*FTNWMALQRAQYLP Trigger: GGGCAGGTACTGAGCTCTCTGCAAGGCCATCCAGTTGGTGAACCACTGAGCTGGATTACAACCTGGTCCATGCGACCCTAAGCCCACGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | GGCACCTCATATTCCCTCTTCCCATTTGCTGGTGTCCTCTGTTACTaGTGCTGCTTCCCCTCCCTTAGAGCCATCCATGGAAGTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: GTSYSLFPFAGVLCY*CCFPSLRAIHGSGA Trigger: GGCACCACTTCCATGGATGGCTCTAAGGGAGGGGAAGCAGCAGCAGTAACAGAGGACACCAGCAAATGGGAAGAGGGAATATGAGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 90 bp | ACCTCATATTCCCTCTTCCCATTTGCTGGTGTCCTCTGTTACTGCTaGTGCTTCCCCTCCCTTAGAGCCATCCATGGAAGTGGTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TSYSLFPFAGVLCYC*CFPSLRAIHGSGAQ Trigger: CTGGGCACCACTTCCATGGATGGCTCTAAGGGAGGGGAAGCAGCAGCAGTAACAGAGGACACCAGCAAATGGGAAGAGGGAATATGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 90 bp | TCTGCCTGCCTGAAGCTGTCCACACGGTTAGCAGAAGCCCCTCTGTaGAATTGCGGGTGTCTATCTCAAGTGACCTTCCAAGCAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SACLKLSTRLAEAPL*NCGCLSQVTFQARS Trigger: AGACCTTGCTTGGAAGGTCACTTGAGATAGACACCCGCAATTCCACAGAGGGGCTTCTGCTAACCGTGTGGACAGCTTCAGGCAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | TGCCTGAAGCTGTCCACACGGTTAGCAGAAGCCCCTCTGTGGAATTaGGGGTGTCTATCTCAAGTGACCTTCCAAGCAAGGTCTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: CLKLSTRLAEAPLWN*GCLSQVTFQARSEH Trigger: GTGTTCAGACCTTGCTTGGAAGGTCACTTGAGATAGACACCCGCAATTCCACAGAGGGGCTTCTGCTAACCGTGTGGACAGCTTCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | CAAGGAGCCACGTGTTCCTGTTCCCAGGAGCGTCAAGGAAGCCCCTaGAAGGTTGCGTCATCATTGCCAAGAATTGTCAGAAACTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QGATCSCSQERQGSP*KVASSLPRIVRNSV Trigger: CACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGGAACACGTGGCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | TCATATTCCCTCTTCCCATTTGCTGGTGTCCTCTGTTACTGCTGCTaGTTCCCCTCCCTTAGAGCCATCCATGGAAGTGGTGCCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SYSLFPFAGVLCYCC*FPSLRAIHGSGAQK Trigger: TTTCTGGGCACCACTTCCATGGATGGCTCTAAGGGAGGGGAAGCAGCAGCAGTAACAGAGGACACCAGCAAATGGGAAGAGGGAATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 90 bp | TCTAGCCTTCTTCTGAAGCTGCACCTCCAACTTTATGTGCTGACTTaGAAGGATGGCTGTTTACAGGACTCCTGGGCTGGTTCACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSLLLKLHLQLYVLT*KDGCLQDSWAGSPS Trigger: GGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAAAGTTGGAGGTGCAGCTTCAGAAGAAGGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS TCA 90 bp | GAAGCTCTGCTGCTCCTAGGGCCCACATTTCACCAACACCACAGCTaGCATTTTTCAGAAGCCTACTCCACTTCTAGCCTCATTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: EALLLLGPTFHQHHS*HFSEAYSTSSLIST Trigger: TGTGGAAATGAGGCTAGAAGTGGAGTAGGCTTCTGAAAAATGTCAGCTGTGGTGTTGGTGAAATGTGGGCCCTAGGAGCAGCAGAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | TACTGCAGCACAGACACTGTGGGATTACATGCCTGTTACTTGGGTTaGGCTAAAACTCAGGCCCTCACAGAATTCAACCAGGCAGGCACA | + |
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Preference number: 5 (lower is better) Translates to: YCSTDTVGLHACYLG*AKTQALTEFNQAGT Trigger: TGTGCCTGCCTGGTTGAATTCTGTGAGGGCCTGAGTTTTAGCTCAACCCAAGTAACAGGCATGTAATCCCACAGTGTCTGTGCTGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | CACGTGTTCCTGTTCCCAGGAGCGTCAAGGAAGCCCCTGCAAGGTTaGGTCATCATTGCCAAGAATTGTCAGAAACTCAGTGTTGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: HVFLFPGASRKPLQG*VIIAKNCQKLSVVE Trigger: TTCTACAACACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGGAACACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 90 bp | TTATGTGCTGACTTGGAAGGATGGCTGTTTACAGGACTCCTGGGCTaGTTCACCTTCCTTGGATACTCGAGTACTGGAGTGCTCAAATGC | + |
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Preference number: 5 (lower is better) Translates to: LCADLEGWLFTGLLG*FTFLGYSSTGVLKC Trigger: GCATTTGAGCACTCCAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CCA 90 bp | CAACTTTATGTGCTGACTTGGAAGGATGGCTGTTTACAGGACTCCTaGGCTGGTTCACCTTCCTTGGATACTCGAGTACTGGAGTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: QLYVLTWKDGCLQDS*AGSPSLDTRVLECS Trigger: TGAGCACTCCAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CCA 90 bp | TCTTCTGAAGCTGCACCTCCAACTTTATGTGCTGACTTGGAAGGATaGCTGTTTACAGGACTCCTGGGCTGGTTCACCTTCCTTGGATAC | + |
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Preference number: 5 (lower is better) Translates to: SSEAAPPTLCADLEG*LFTGLLGWFTFLGY Trigger: GTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAAAGTTGGAGGTGCAGCTTCAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CCA 90 bp | GTGGTTGTTCTTGTCTCAATAGAGACAAGTAATCGTGGCCAATCGTaGCACATGGTGCCTTTCCCTCTTCTTTCACTTCACTGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: VVVLVSIETSNRGQS*HMVPFPLLSLHWGH Trigger: GTGGCCCCAGTGAAGTGAAAGAAGAGGGAAAGGCACCATGTGCCACGATTGGCCACGATTACTTGTCTCTATTGAGACAAGAACAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | TTCTTTCACTTCACTGGGGCCACTGTAGTAATGTGGACCTATGATTaGCAGCTGGTAGCCCAGGATACATTTCAGCTGGAAGCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FFHFTGATVVMWTYD*QLVAQDTFQLEALL Trigger: CAGCAGAGCTTCCAGCTGAAATGTATCCTGGGCTACCAGCTGTCAATCATAGGTCCACATTACTACAGTGGCCCCAGTGAAGTGAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | CCTCTTCTTTCACTTCACTGGGGCCACTGTAGTAATGTGGACCTATaGTTGACAGCTGGTAGCCCAGGATACATTTCAGCTGGAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PLLSLHWGHCSNVDL*LTAGSPGYISAGSS Trigger: AGAGCTTCCAGCTGAAATGTATCCTGGGCTACCAGCTGTCAATCATAGGTCCACATTACTACAGTGGCCCCAGTGAAGTGAAAGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 90 bp | GTTCCCAGGAGCGTCAAGGAAGCCCCTGCAAGGTTGCGTCATCATTaGCAAGAATTGTCAGAAACTCAGTGTTGTAGAATAGAAAGACCG | + |
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Preference number: 5 (lower is better) Translates to: VPRSVKEAPARLRHH*QELSETQCCRIERP Trigger: CGGTCTTTCTATTCTACAACACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 90 bp | GTTTCGGTTAATTTGGAAGGATGGCTGTTTACAGGACTCCTGGGCTaGTTCACCTTCCTTGGATACTCGAGTACTGGAGTGCTCAAATGC | + |
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Preference number: 5 (lower is better) Translates to: VSVNLEGWLFTGLLG*FTFLGYSSTGVLKC Trigger: GCATTTGAGCACTCCAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAATTAACCGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420928.1 |
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| CDS TCA 90 bp | TGCGAAGCTGTGGAGCAGACCGATGAGGAGGTGGAGGTGAAGCATTaGACACACAACAAGAACTCACTACACAACTTATTTGTCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: CEAVEQTDEEVEVKH*THNKNSLHNLFVWL Trigger: TAACCAGACAAATAAGTTGTGTAGTGAGTTCTTGTTGTGTGTTCAATGCTTCACCTCCACCTCCTCATCGGTCTGCTCCACAGCTTCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | CCAACAGAAAATGCACTCCATTCTGCCTGCAGTAGTCCAGAACCATaGCAAATGAGAAACACAAACACAGGCGTGATTTATGAGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PTENALHSACSSPEP*QMRNTNTGVIYEVL Trigger: GAGGACCTCATAAATCACGCCTGTGTTTGTGTTTCTCATTTGGCATGGTTCTGGACTACTGCAGGCAGAATGGAGTGCATTTTCTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 90 bp | TGGTGCCCAGAAACTTTCAGAACATGTTATTTGCCAGATGGAAGATaGCCAGTGTCAGAGCTGTGTATAGGAGACCTGTTTGCAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: WCPETFRTCYLPDGR*PVSELCIGDLFAEH Trigger: ATGCTCTGCAAACAGGTCTCCTATACACAGCTCTGACACTGGCCATCTTCCATCTGGCAAATAACATGTTCTGAAAGTTTCTGGGCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 90 bp | ATGGAAGTGGTGCCCAGAAACTTTCAGAACATGTTATTTGCCAGATaGAAGATGGCCAGTGTCAGAGCTGTGTATAGGAGACCTGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: MEVVPRNFQNMLFAR*KMASVRAVYRRPVC Trigger: GCAAACAGGTCTCCTATACACAGCTCTGACACTGGCCATCTTCCATCTGGCAAATAACATGTTCTGAAAGTTTCTGGGCACCACTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | GAAACAAGGAATGAACGAGCATTTCTCCCTTTCTATTCATATTTGTaGGTGGCTTGCTGTCTTCCTATCTGTCTGCCCCATAGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: ETRNERAFLPFYSYL*VACCLPICLPHRHL Trigger: CAGATGCCTATGGGGCAGACAGATAGGAAGACAGCAAGCCACTCACAAATATGAATAGAAAGGGAGAAATGCTCGTTCATTCCTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 90 bp | CAACATATGAAATTTGGAAGGACACAAACATTCAGTCCAATACACTaGCCTGCTAATTCAAATGGTGCCTGGCACACAATGGGCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: QHMKFGRTQTFSPIH*PANSNGAWHTMGHE Trigger: CTCATGGCCCATTGTGTGCCAGGCACCATTTGAATTAGCAGGGCAGTGTATTGGACTGAATGTTTGTGTCCTTCCAAATTTCATATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | CCCAGTTTTGGAGGTCAAAGCTCTTGTCCATGTAAAGCAAAGAACTaGGGGTATAACTTATCTTGTGGAATCCTTGAAGAAGCCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: PSFGGQSSCPCKAKN*GYNLSCGILEEAIS Trigger: GGAAATGGCTTCTTCAAGGATTCCACAAGATAAGTTATACCCTCAGTTCTTTGCTTTACATGGACAAGAGCTTTGACCTCCAAAACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420928.1 ENST00000635258.1 |
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| CDS TCA 90 bp | GAGGGTATAACTTATCTTGTGGAATCCTTGAAGAAGCCATTTCCTTaGGCACAAGACCCAAAATGTTCCTCAGAATGGCTTGTAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: EGITYLVESLKKPFP*AQDPKCSSEWLVKS Trigger: GGATTTTACAAGCCATTCTGAGGAACATTTTGGGTCTTGTGCTCAAGGAAATGGCTTCTTCAAGGATTCCACAAGATAAGTTATACCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420928.1 ENST00000635258.1 ENST00000635277.1 |
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| CDS TCA 90 bp | ACCAGTTTTGGAGGTCAAAGCTCTTGTCCATGTAAAGCAAAGAACTaGGGGTATAACTTATCTTGTGGAATCCTTGAAGAAGCCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: TSFGGQSSCPCKAKN*GYNLSCGILEEAIS Trigger: GGAAATGGCTTCTTCAAGGATTCCACAAGATAAGTTATACCCTCAGTTCTTTGCTTTACATGGACAAGAGCTTTGACCTCCAAAACTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635277.1 |
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| CDS CCA 90 bp | TTTTATCACTTGCAATTTACTTTAAATACTGCAGCACAGACACTGTaGGATTACATGCCTGTTACTTGGGTTGAGCTAAAACTCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: FYHLQFTLNTAAQTL*DYMPVTWVELKLRP Trigger: GGGCCTGAGTTTTAGCTCAACCCAAGTAACAGGCATGTAATCCCACAGTGTCTGTGCTGCAGTATTTAAAGTAAATTGCAAGTGATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 90 bp | CTCAAATGCATACGTTCTAGAGACGGTTTGTTTCATTATAAGATGTaGCTAAATATGAACTTTGAGTTCCCTGAAAACCGACACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LKCIRSRDGLFHYKM*LNMNFEFPENRHLC Trigger: ACACAAGTGTCGGTTTTCAGGGAACTCAAAGTTCATATTTAGTCACATCTTATAATGAAACAAACCGTCTCTAGAACGTATGCATTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 90 bp | AAGTATTGCAGAGCTTCTGTTATCTGTATCTTACTTTGGCTTGTCTaGTTAGCATGCAGATTTGGGTTAAACTTGTGGCTTGTTAATAAG | + |
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Preference number: 5 (lower is better) Translates to: KYCRASVICILLWLV*LACRFGLNLWLVNK Trigger: CTTATTAACAAGCCACAAGTTTAACCCAAATCTGCATGCTAATCAGACAAGCCAAAGTAAGATACAGATAACAGAAGCTCTGCAATACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | CAGCTCCTCCGTGGGCACCGAGGTGCTTGCCAGCCATaGGAAGCTGTGGAGCAGACCGATGAGGAGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: QLLRGHRGACQP*EAVEQTDEEVE Trigger: CTCCACCTCCTCATCGGTCTGCTCCACAGCTTCGCATGGCTGGCAAGCACCTCGGTGCCCACGGAGGAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | GTACCTGCCCAGCTCCTCCGTGGGCACCGAGGTGCTTaGCAGCCATGCGAAGCTGTGGAGCAGACCGATGAG | + |
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Preference number: 6 (lower is better) Translates to: VPAQLLRGHRGA*QPCEAVEQTDE Trigger: CTCATCGGTCTGCTCCACAGCTTCGCATGGCTGGCAAGCACCTCGGTGCCCACGGAGGAGCTGGGCAGGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | CTCAGTACCTGCCCAGCTCCTCCGTGGGCACCGAGGTaGTTGCCAGCCATGCGAAGCTGTGGAGCAGACCGA | + |
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Preference number: 6 (lower is better) Translates to: LSTCPAPPWAPR*LPAMRSCGADR Trigger: TCGGTCTGCTCCACAGCTTCGCATGGCTGGCAAGCACCTCGGTGCCCACGGAGGAGCTGGGCAGGTACTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | TCACCAACTGGATGGCCTTGCAGAGAGCTCAGTACCTaGCCAGCTCCTCCGTGGGCACCGAGGTGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SPTGWPCRELST*PAPPWAPRCLP Trigger: TGGCAAGCACCTCGGTGCCCACGGAGGAGCTGGGCAGGTACTGAGCTCTCTGCAAGGCCATCCAGTTGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | GGACCAGGTTGTAATCCAGCTCAGTGGTTCACCAACTaGATGGCCTTGCAGAGAGCTCAGTACCTGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPGCNPAQWFTN*MALQRAQYLPS Trigger: GCTGGGCAGGTACTGAGCTCTCTGCAAGGCCATCCAGTTGGTGAACCACTGAGCTGGATTACAACCTGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | CTCAGGCCCTCACAGAATTCAACCAGGCAGGCACACTaGCCTCAGGTGAGAGAGGAAACCCCTCTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRPSQNSTRQAH*PQVREETPLLE Trigger: TTCCAGCAGAGGGGTTTCCTCTCTCACCTGAGGCAAGTGTGCCTGCCTGGTTGAATTCTGTGAGGGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | GTTGCGAATCCAGAAGGGAGCAAAGCAGGAAAGTTCTaGTCTCAAGGAGCCACGTGTTCCTGTTCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VANPEGSKAGKF*SQGATCSCSQE Trigger: CTCCTGGGAACAGGAACACGTGGCTCCTTGAGAGCAGAACTTTCCTGCTTTGCTCCCTTCTGGATTCGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000635258.1 ENST00000635277.1 ENST00000635299.1 |
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| CDS GCA 72 bp | CTCTTCCCATTTGCTGGTGTCCTCTGTTACTGCTGCTaGTTCCCCTCCCTTAGAGCCATCCATGGAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LFPFAGVLCYCC*FPSLRAIHGSG Trigger: ACCACTTCCATGGATGGCTCTAAGGGAGGGGAAGCAGCAGCAGTAACAGAGGACACCAGCAAATGGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 72 bp | CAAGGTCAAGGGCACCTCATATTCCCTCTTCCCATTTaGTGGTGTCCTCTGTTACTGCTGCTGCTTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QGQGHLIFPLPI*WCPLLLLLLPL Trigger: GAGGGGAAGCAGCAGCAGTAACAGAGGACACCAGCAAATGGGAAGAGGGAATATGAGGTGCCCTTGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 72 bp | CTGTCCACACGGTTAGCAGAAGCCCCTCTGTGGAATTaGGGGTGTCTATCTCAAGTGACCTTCCAAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSTRLAEAPLWN*GCLSQVTFQAR Trigger: CCTTGCTTGGAAGGTCACTTGAGATAGACACCCGCAATTCCACAGAGGGGCTTCTGCTAACCGTGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | ACGTGTTCCTGTTCCCAGGAGCGTCAAGGAAGCCCCTaGAAGGTTGCGTCATCACCAGTTTTGGAGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TCSCSQERQGSP*KVASSPVLEVK Trigger: TTTGACCTCCAAAACTGGTGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGGAACACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635277.1 |
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| CDS CAA 72 bp | GCTGTCCACACGGTTAGCAGAAGCCCCTCTGTGGAATaGCGGGTGTCTATCTCAAGTGACCTTCCAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AVHTVSRSPSVE*RVSISSDLPSK Trigger: CTTGCTTGGAAGGTCACTTGAGATAGACACCCGCAATTCCACAGAGGGGCTTCTGCTAACCGTGTGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | CACAGAATTCAACCAGGCAGGCACACTTGCCTCAGGTaGGAGAGGAAACCCCTCTGCTGGAACAAGTATTGC | + |
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Preference number: 6 (lower is better) Translates to: HRIQPGRHTCLR*ERKPLCWNKYC Trigger: GCAATACTTGTTCCAGCAGAGGGGTTTCCTCTCTCACCTGAGGCAAGTGTGCCTGCCTGGTTGAATTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | ACGTGTTCCTGTTCCCAGGAGCGTCAAGGAAGCCCCTaGAAGGTTGCGTCATCATTGCCAAGAATTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TCSCSQERQGSP*KVASSLPRIVR Trigger: TCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGGAACACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | GTGCTGACTTGGAAGGATGGCTGTTTACAGGACTCCTaGGCTGGTTCACCTTCCTTGGATACTCGAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: VLTWKDGCLQDS*AGSPSLDTRVL Trigger: CAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CCA 72 bp | CTGAAGCTGTCCACACGGTTAGCAGAAGCCCCTCTGTaGAATTGCGGGTGTCTATCTCAAGTGACCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LKLSTRLAEAPL*NCGCLSQVTFQ Trigger: TTGGAAGGTCACTTGAGATAGACACCCGCAATTCCACAGAGGGGCTTCTGCTAACCGTGTGGACAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | CCTGTTCCCAGGAGCGTCAAGGAAGCCCCTGCAAGGTaGCGTCATCATTGCCAAGAATTGTCAGAAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: PVPRSVKEAPAR*RHHCQELSETQ Trigger: CTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 90 bp | CCACGTGTTCCTGTTCCCAGGAGCGTCAAGGAAGCCCCTGCAAGGTaGCGTCATCATTGCCAAGAATTGTCAGAAACTCAGTGTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PRVPVPRSVKEAPAR*RHHCQELSETQCCR Trigger: TCTACAACACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAGGAACACGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | GTAACAGATGTCCCCATTAACTCAGCCAGGAGGGGCTaGAAGGCACATCAGATGAGTGCCTACCAGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VTDVPINSARRG*KAHQMSAYQLS Trigger: TGACAACTGGTAGGCACTCATCTGATGTGCCTTTCAGCCCCTCCTGGCTGAGTTAATGGGGACATCTGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 72 bp | CTGCTCCTAGGGCCCACATTTCACCAACACCACAGCTaGCATTTTTCAGAAGCCTACTCCACTTCTAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLLGPTFHQHHS*HFSEAYSTSSL Trigger: GAGGCTAGAAGTGGAGTAGGCTTCTGAAAAATGTCAGCTGTGGTGTTGGTGAAATGTGGGCCCTAGGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 72 bp | CTCAGCCAGGAGGGGCTGAAAGGCACATCAGATGAGTaGCTACCAGTTGTCAAGTATGATGTTAGTGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LSQEGLKGTSDE*LPVVKYDVSVA Trigger: CGCAACACTAACATCATACTTGACAACTGGTAGGCACTCATCTGATGTGCCTTTCAGCCCCTCCTGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS GCA 72 bp | CTGTTCCCAGGAGCGTCAAGGAAGCCCCTGCAAGGTTaGGTCATCATTGCCAAGAATTGTCAGAAACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LFPGASRKPLQG*VIIAKNCQKLS Trigger: ACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTCCTTGACGCTCCTGGGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | CTTCTGAAGCTGCACCTCCAACTTTATGTGCTGACTTaGAAGGATGGCTGTTTACAGGACTCCTGGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLKLHLQLYVLT*KDGCLQDSWAG Trigger: ACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAAAGTTGGAGGTGCAGCTTCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CAA 72 bp | TCTTCTGAAGCTGCACCTCCAACTTTATGTGCTGACTaGGAAGGATGGCTGTTTACAGGACTCCTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSEAAPPTLCAD*EGWLFTGLLGW Trigger: CCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAGTCAGCACATAAAGTTGGAGGTGCAGCTTCAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635277.1 ENST00000635299.1 |
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| CDS CAA 90 bp | TGGAAGGATGGCTGTTTACAGGACTCCTGGGCTGGTTCACCTTCCTaGGATACTCGAGTACTGGAGTGCTCAAATGCATACGTTCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: WKDGCLQDSWAGSPS*DTRVLECSNAYVLE Trigger: CTCTAGAACGTATGCATTTGAGCACTCCAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420928.1 ENST00000635277.1 ENST00000635299.1 |
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| CDS GCA 72 bp | CATATTTGTGAGTGGCTTGCTGTCTTCCTATCTGTCTaGCCCATAGGCATCTGTATGGGAAGGACTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HICEWLAVFLSV*PIGICMGRTGS Trigger: ACTGCCAGTCCTTCCCATACAGATGCCTATGGGGCAGACAGATAGGAAGACAGCAAGCCACTCACAAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | CGGTTAATTTGGAAGGATGGCTGTTTACAGGACTCCTaGGCTGGTTCACCTTCCTTGGATACTCGAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: RLIWKDGCLQDS*AGSPSLDTRVL Trigger: CAGTACTCGAGTATCCAAGGAAGGTGAACCAGCCCAGGAGTCCTGTAAACAGCCATCCTTCCAAATTAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420928.1 |
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| CDS CCA 72 bp | ATCTGTCTGCCCCATAGGCATCTGTATGGGAAGGACTaGCAGTTGGTGCTACTAAATAAACCCCATCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ICLPHRHLYGKD*QLVLLNKPHLG Trigger: CCCAAGATGGGGTTTATTTAGTAGCACCAACTGCCAGTCCTTCCCATACAGATGCCTATGGGGCAGACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | TTCACTGGGGCCACTGTAGTAATGTGGACCTATGATTaGCAGCTGGTAGCCCAGGATACATTTCAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FTGATVVMWTYD*QLVAQDTFQLE Trigger: TTCCAGCTGAAATGTATCCTGGGCTACCAGCTGTCAATCATAGGTCCACATTACTACAGTGGCCCCAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 72 bp | TCACTTCACTGGGGCCACTGTAGTAATGTGGACCTATaGTTGACAGCTGGTAGCCCAGGATACATTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLHWGHCSNVDL*LTAGSPGYISA Trigger: AGCTGAAATGTATCCTGGGCTACCAGCTGTCAATCATAGGTCCACATTACTACAGTGGCCCCAGTGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 72 bp | GCAGCACAGACACTGTGGGATTACATGCCTGTTACTTaGGTTGAGCTAAAACTCAGGCCCTCACAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: AAQTLWDYMPVT*VELKLRPSQNS Trigger: TGAATTCTGTGAGGGCCTGAGTTTTAGCTCAACCCAAGTAACAGGCATGTAATCCCACAGTGTCTGTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 90 bp | AGCCATCCATGGAAGTGGTGCCCAGAAACTTTCAGAACATGTTATTaGCCAGATGGAAGATGGCCAGTGTCAGAGCTGTGTATAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SHPWKWCPETFRTCY*PDGRWPVSELCIGD Trigger: GTCTCCTATACACAGCTCTGACACTGGCCATCTTCCATCTGGCAAATAACATGTTCTGAAAGTTTCTGGGCACCACTTCCATGGATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CAA 90 bp | AGGACAAAAAGACAAACACCGCATGTTCTCACTCATAGGTGGGAATaGAACAATGAGAACACTTGGGCACGGGAAGGGGAACATCACACA | + |
|
Preference number: 6 (lower is better) Translates to: RTKRQTPHVLTHRWE*NNENTWAREGEHHT Trigger: TGTGTGATGTTCCCCTTCCCGTGCCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGTCTTTTTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | ACAGACACTGTGGGATTACATGCCTGTTACTTGGGTTaGGCTAAAACTCAGGCCCTCACAGAATTCAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TDTVGLHACYLG*AKTQALTEFNQ Trigger: CTGGTTGAATTCTGTGAGGGCCTGAGTTTTAGCTCAACCCAAGTAACAGGCATGTAATCCCACAGTGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | CTTGTCTCAATAGAGACAAGTAATCGTGGCCAATCGTaGCACATGGTGCCTTTCCCTCTTCTTTCACTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVSIETSNRGQS*HMVPFPLLSLH Trigger: GTGAAGTGAAAGAAGAGGGAAAGGCACCATGTGCCACGATTGGCCACGATTACTTGTCTCTATTGAGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CAA 72 bp | TGTGTCTTCTCATCCCAGTTTGGTCTCCACTGGTTCTaGGGCAGAATTTCCCTGAGATGTATCCAAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CVFSSQFGLHWF*GRISLRCIQVT Trigger: TGTGACTTGGATACATCTCAGGGAAATTCTGCCCAAGAACCAGTGGAGACCAAACTGGGATGAGAAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 90 bp | CACTTGCCTCAGGTGAGAGAGGAAACCCCTCTGCTGGAACAAGTATaGCAGAGCTTCTGTTATCTGTATCTTACTTTGGCTTGTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: HLPQVREETPLLEQV*QSFCYLYLTLACLI Trigger: AATCAGACAAGCCAAAGTAAGATACAGATAACAGAAGCTCTGCAATACTTGTTCCAGCAGAGGGGTTTCCTCTCTCACCTGAGGCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | TTCCTTCTCTGCTTCTTACATTCTCAACATGCTTTGTaGGCTCCAAGGTCAAGGGCACCTCATATTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLLCFLHSQHAL*APRSRAPHIPS Trigger: AGAGGGAATATGAGGTGCCCTTGACCTTGGAGCTCACAAAGCATGTTGAGAATGTAAGAAGCAGAGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 72 bp | GTGGAGCAGACCGATGAGGAGGTGGAGGTGAAGCATTaGACACACAACAAGAACTCACTACACAACTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: VEQTDEEVEVKH*THNKNSLHNLF Trigger: AAATAAGTTGTGTAGTGAGTTCTTGTTGTGTGTTCAATGCTTCACCTCCACCTCCTCATCGGTCTGCTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | TGTCAATGTGTCTTCTCATCCCAGTTTGGTCTCCACTaGTTCTTGGGCAGAATTTCCCTGAGATGTATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CQCVFSSQFGLH*FLGRISLRCIQ Trigger: TTGGATACATCTCAGGGAAATTCTGCCCAAGAACCAGTGGAGACCAAACTGGGATGAGAAGACACATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | GAAGCCCCTGCAAGGTTGCGTCATCATTGCCAAGAATaGTCAGAAACTCAGTGTTGTAGAATAGAAAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: EAPARLRHHCQE*SETQCCRIERP Trigger: CGGTCTTTCTATTCTACAACACTGAGTTTCTGACAATTCTTGGCAATGATGACGCAACCTTGCAGGGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 90 bp | TCTTCCAGGTCTTATGGAAACACTTCCTTACTGAGTGCCTACCAGTaGTCAAGTATGATGTTAGTGTTGCGAATCCAGAAGGGAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSYGNTSLLSAYQ*SSMMLVLRIQKGAK Trigger: CTTTGCTCCCTTCTGGATTCGCAACACTAACATCATACTTGACAACTGGTAGGCACTCAGTAAGGAAGTGTTTCCATAAGACCTGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | GCTCACAGAACAAGTTGTATGAGCTGCTTCTGTGCTTaGTTGATAATAACTCCTCAACCGAAAAGAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHRTSCMSCFCA*LIITPQPKRAG Trigger: TCCAGCTCTTTTCGGTTGAGGAGTTATTATCAAGCAAGCACAGAAGCAGCTCATACAACTTGTTCTGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | GTCTTCCAGGTCTTATGGAAACACTTCCTTACTGAGTaGCTACCAGTTGTCAAGTATGATGTTAGTGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: VFQVLWKHFLTE*LPVVKYDVSVA Trigger: CGCAACACTAACATCATACTTGACAACTGGTAGGCACTCAGTAAGGAAGTGTTTCCATAAGACCTGGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | TCTTGTCTTCCAGGTCTTATGGAAACACTTCCTGAGTaGCTACCAGTTGTCAAGTATGATGTTAGTGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SCLPGLMETLPE*LPVVKYDVSVA Trigger: CGCAACACTAACATCATACTTGACAACTGGTAGGCACTCAGGAAGTGTTTCCATAAGACCTGGAAGACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635277.1 |
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| CDS CCA 72 bp | ACAAAAAGACAAACACCGCATGTTCTCACTCATAGGTaGGAATTGAACAATGAGAACACTTGGGCACGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TKRQTPHVLTHR*ELNNENTWARE Trigger: TTCCCGTGCCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGTCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | TGGTGTAAGTCCTATAAGGGAAAGACAACGACTGTCTaGTTCGCTTCATATCCTCAATGCCCAACATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WCKSYKGKTTTV*FASYPQCPTWS Trigger: AGACCATGTTGGGCATTGAGGATATGAAGCGAACAAGACAGTCGTTGTCTTTCCCTTATAGGACTTACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | AGCTCACAGAACAAGTTGTATGAGCTGCTTCTGTGCTaGCTTGATAATAACTCCTCAACCGAAAAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSQNKLYELLLC*LDNNSSTEKSW Trigger: CCAGCTCTTTTCGGTTGAGGAGTTATTATCAAGCAAGCACAGAAGCAGCTCATACAACTTGTTCTGTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | CAGAAGCCTGAGACTTCAGTGAGCTCACAGAACAAGTaGTATGAGCTGCTTCTGTGCTTGCTTGATAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: QKPETSVSSQNK*YELLLCLLDNN Trigger: GTTATTATCAAGCAAGCACAGAAGCAGCTCATACAACTTGTTCTGTGAGCTCACTGAAGTCTCAGGCTTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | CAGGTCTTATGGAAACACTTCCTGAGTGCCTACCAGTaGTCAAGTATGATGTTAGTGTTGCGAATCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QVLWKHFLSAYQ*SSMMLVLRIQK Trigger: CTTCTGGATTCGCAACACTAACATCATACTTGACAACTGGTAGGCACTCAGGAAGTGTTTCCATAAGACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635277.1 |
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| CDS CAA 90 bp | CACTGTCAATGTGTCTTCTCATCCCAGTTTGGTCTCCACTGGTTCTaGGGCAGAATTTCCCTGAGATGTATCCAAGTCACAGATTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HCQCVFSSQFGLHWF*GRISLRCIQVTDLK Trigger: TTTTAAATCTGTGACTTGGATACATCTCAGGGAAATTCTGCCCAAGAACCAGTGGAGACCAAACTGGGATGAGAAGACACATTGACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 90 bp | ATGAGCAATAAGTCTTCATCTGCCTTTGTGTCCCCACATTATGTCTaGTCTTCCAGGTCTTATGGAAACACTTCCTTACTGAGTGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: MSNKSSSAFVSPHYV*SSRSYGNTSLLSAY Trigger: GTAGGCACTCAGTAAGGAAGTGTTTCCATAAGACCTGGAAGACAAGACATAATGTGGGGACACAAAGGCAGATGAAGACTTATTGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | AAATTTGGAAGGACACAAACATTCAGTCCAATACACTaGCCTGCTAATTCAAATGGTGCCTGGCACACAATG | + |
|
Preference number: 6 (lower is better) Translates to: KFGRTQTFSPIH*PANSNGAWHTM Trigger: CATTGTGTGCCAGGCACCATTTGAATTAGCAGGGCAGTGTATTGGACTGAATGTTTGTGTCCTTCCAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 72 bp | ACTTATCTTGTGGAATCCTTGAAGAAGCCATTTCCTTaGGCACAAGACCCAAAATGTTCCTCAGAATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TYLVESLKKPFP*AQDPKCSSEWL Trigger: AAGCCATTCTGAGGAACATTTTGGGTCTTGTGCTCAAGGAAATGGCTTCTTCAAGGATTCCACAAGATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000420928.1 ENST00000635258.1 ENST00000635277.1 |
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| CDS TCA 72 bp | TCTCAAAAGAAGACGTTTATGCAGCCAACAGACACATaGAAGAATGCTCATCATCACTGGCCATCAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SQKKTFMQPTDT*KNAHHHWPSEK Trigger: TTTCTCTGATGGCCAGTGATGATGAGCATTCTTTCATGTGTCTGTTGGCTGCATAAACGTCTTCTTTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CCA 72 bp | GCCATTTTAGTTAGATATGACACAATGAATCGGGTTTaGATCAGGAGGGAAGGACTGTCTATTTCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AILVRYDTMNRV*IRREGLSISGS Trigger: ACTTCCTGAAATAGACAGTCCTTCCCTCCTGATCCAAACCCGATTCATTGTGTCATATCTAACTAAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | TCTTATGGAAACACTTCCTTACTGAGTGCCTACCAGTaGTCAAGTATGATGTTAGTGTTGCGAATCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SYGNTSLLSAYQ*SSMMLVLRIQK Trigger: CTTCTGGATTCGCAACACTAACATCATACTTGACAACTGGTAGGCACTCAGTAAGGAAGTGTTTCCATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS TCA 72 bp | GGAGGTCAAAGCTCTTGTCCATGTAAAGCAAAGAACTaGGGGTATAACTTATCTTGTGGAATCCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GGQSSCPCKAKN*GYNLSCGILEE Trigger: TTCTTCAAGGATTCCACAAGATAAGTTATACCCTCAGTTCTTTGCTTTACATGGACAAGAGCTTTGACCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000420928.1 ENST00000635258.1 ENST00000635277.1 |
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| CDS CCA 72 bp | GCATTTGAAATCCACTCATCTAAAGTAGACTTAGAGTaGAGGCTTAGGACACAATTTCCCATTTCTAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: AFEIHSSKVDLE*RLRTQFPISNS Trigger: TGAGTTAGAAATGGGAAATTGTGTCCTAAGCCTCCACTCTAAGTCTACTTTAGATGAGTGGATTTCAAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS CCA 72 bp | TTGCAATTTACTTTAAATACTGCAGCACAGACACTGTaGGATTACATGCCTGTTACTTGGGTTGAGCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQFTLNTAAQTL*DYMPVTWVELK Trigger: TTTTAGCTCAACCCAAGTAACAGGCATGTAATCCCACAGTGTCTGTGCTGCAGTATTTAAAGTAAATTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | CAAGTATTGCAGAGCTTCTGTTATCTGTATCTTACTTaGGCTTGTCTGATTAGCATGCAGATTTGGGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: QVLQSFCYLYLT*ACLISMQIWVK Trigger: TTTAACCCAAATCTGCATGCTAATCAGACAAGCCAAAGTAAGATACAGATAACAGAAGCTCTGCAATACTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS CAA 72 bp | TGTGTGAAGGGTTTCTTAATGGTTATTTCCTTTCGTTaGGTTACTACTATGCCCTATCTTCTCACTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CVKGFLMVISFR*VTTMPYLLTFT Trigger: AGTGAAAGTGAGAAGATAGGGCATAGTAGTAACCAAACGAAAGGAAATAACCATTAAGAAACCCTTCACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635258.1 |
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| CDS GCA 72 bp | AGCAACACCTTTACAGACACACCCAGAAACAATATTTaGATCCTTCAATCCAATCAAATTGACACTTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SNTFTDTPRNNI*ILQSNQIDTLY Trigger: ATACAAAGTGTCAATTTGATTGGATTGAAGGATGCAAATATTGTTTCTGGGTGTGTCTGTAAAGGTGTTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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| CDS TCA 72 bp | ATACGTTCTAGAGACGGTTTGTTTCATTATAAGATGTaGCTAAATATGAACTTTGAGTTCCCTGAAAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: IRSRDGLFHYKM*LNMNFEFPENR Trigger: TCGGTTTTCAGGGAACTCAAAGTTCATATTTAGTCACATCTTATAATGAAACAAACCGTCTCTAGAACGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635299.1 |
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