Pregenerated sensors for LINC01424 (Homo sapiens)
Ensembl gene IDs: ENSG00000236519Ensembl transcript IDs: ENST00000417820.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TACAGTTGGCCTCCCCAGGGTGTGCTGCCCTGCAGTATCACACACTaGCTGCTCAGAGTCCCTGGGACTCCACTACCACTTGATCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSWPPQGVLPCSITH*LLRVPGTPLPLDPS Trigger: ACTTGGATCAAGTGGTAGTGGAGTCCCAGGGACTCTGAGCAGCCAGTGTGTGATACTGCAGGGCAGCACACCCTGGGGAGGCCAACTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 90 bp | GCACCGAAAGGTTCACATCCCAGGAACCCCCACTCCCAGGGAACTTaGGTTGTCATCTTAGCCATGCTGCAGGAGTGCCCAGCTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: APKGSHPRNPHSQGT*VVILAMLQECPAGN Trigger: GTTTCCAGCTGGGCACTCCTGCAGCATGGCTAAGATGACAACTCAAGTTCCCTGGGAGTGGGGGTTCCTGGGATGTGAACCTTTCGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS GCA 90 bp | ATTAATTTTATTCTGTACAGTTGGCCTCCCCAGGGTGTGCTGCCCTaGAGTATCACACACTGGCTGCTCAGAGTCCCTGGGACTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: INFILYSWPPQGVLP*SITHWLLRVPGTPL Trigger: TAGTGGAGTCCCAGGGACTCTGAGCAGCCAGTGTGTGATACTGCAGGGCAGCACACCCTGGGGAGGCCAACTGTACAGAATAAAATTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS GCA 90 bp | AAAGCATTAATTTTATTCTGTACAGTTGGCCTCCCCAGGGTGTGCTaGCCTGCAGTATCACACACTGGCTGCTCAGAGTCCCTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: KALILFCTVGLPRVC*PAVSHTGCSESLGL Trigger: GAGTCCCAGGGACTCTGAGCAGCCAGTGTGTGATACTGCAGGGCAGCACACCCTGGGGAGGCCAACTGTACAGAATAAAATTAATGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 90 bp | GGGAACTTGAGTTGTCATCTTAGCCATGCTGCAGGAGTGCCCAGCTaGAAACGCGTGATGTTCATGGGAAAACCCCACCGTATAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: GNLSCHLSHAAGVPS*KRVMFMGKPHRITW Trigger: CCATGTTATACGGTGGGGTTTTCCCATGAACATCACGCGTTTCCAGCTGGGCACTCCTGCAGCATGGCTAAGATGACAACTCAAGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 90 bp | TATCACACACTGGCTGCTCAGAGTCCCTGGGACTCCACTACCACTTaGTCCAAGTTGAGAGTTCCACGAGTTAGCCAGTTAAAACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: YHTLAAQSPWDSTTT*SKLRVPRVSQLKHR Trigger: CCTATGTTTTAACTGGCTAACTCGTGGAACTCTCAACTTGGATCAAGTGGTAGTGGAGTCCCAGGGACTCTGAGCAGCCAGTGTGTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS GCA 90 bp | TCTCTGAAGATAAGGTGTTGTAACAGTCCTGTTGAGGGGAGAGACTaGCATCTTGTTTCAGCAACTCATATTTCAAGTGACTTTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKIRCCNSPVEGRD*HLVSATHISSDFCH Trigger: GTGACAAAAGTCACTTGAAATATGAGTTGCTGAAACAAGATGGCAGTCTCTCCCCTCAACAGGACTGTTACAACACCTTATCTTCAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 90 bp | AAGATTACTTATGTGAAACTGACTCCAAGAATCTTTGGGTTAAATTaGTGCTCCTGGAGGAGAGAGGCCCTATTTATCCTAGTATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: KITYVKLTPRIFGLN*CSWRREALFILVSM Trigger: CATAGATACTAGGATAAATAGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATAAGTAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 90 bp | TATTTTCAACAAGATTACTTATGTGAAACTGACTCCAAGAATCTTTaGGTTAAATTGATGCTCCTGGAGGAGAGAGGCCCTATTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFQQDYLCETDSKNL*VKLMLLEERGPIYP Trigger: AGGATAAATAGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATAAGTAATCTTGTTGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 72 bp | CCTCCCCAGGGTGTGCTGCCCTGCAGTATCACACACTaGCTGCTCAGAGTCCCTGGGACTCCACTACCACTT | + |
|
Preference number: 6 (lower is better) Translates to: PPQGVLPCSITH*LLRVPGTPLPL Trigger: AAGTGGTAGTGGAGTCCCAGGGACTCTGAGCAGCCAGTGTGTGATACTGCAGGGCAGCACACCCTGGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 72 bp | GGTTCACATCCCAGGAACCCCCACTCCCAGGGAACTTaGGTTGTCATCTTAGCCATGCTGCAGGAGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSHPRNPHSQGT*VVILAMLQECP Trigger: TGGGCACTCCTGCAGCATGGCTAAGATGACAACTCAAGTTCCCTGGGAGTGGGGGTTCCTGGGATGTGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 72 bp | AGGTTCACATCCCAGGAACCCCCACTCCCAGGGAACTaGAGTTGTCATCTTAGCCATGCTGCAGGAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFTSQEPPLPGN*SCHLSHAAGVP Trigger: GGGCACTCCTGCAGCATGGCTAAGATGACAACTCAAGTTCCCTGGGAGTGGGGGTTCCTGGGATGTGAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 90 bp | TGCACCGAAAGGTTCACATCCCAGGAACCCCCACTCCCAGGGAACTaGAGTTGTCATCTTAGCCATGCTGCAGGAGTGCCCAGCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CTERFTSQEPPLPGN*SCHLSHAAGVPSWK Trigger: TTTCCAGCTGGGCACTCCTGCAGCATGGCTAAGATGACAACTCAAGTTCCCTGGGAGTGGGGGTTCCTGGGATGTGAACCTTTCGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 72 bp | AGTTGTCATCTTAGCCATGCTGCAGGAGTGCCCAGCTaGAAACGCGTGATGTTCATGGGAAAACCCCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SCHLSHAAGVPS*KRVMFMGKPHR Trigger: ACGGTGGGGTTTTCCCATGAACATCACGCGTTTCCAGCTGGGCACTCCTGCAGCATGGCTAAGATGACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 72 bp | CTGGCTGCTCAGAGTCCCTGGGACTCCACTACCACTTaGTCCAAGTTGAGAGTTCCACGAGTTAGCCAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LAAQSPWDSTTT*SKLRVPRVSQL Trigger: TAACTGGCTAACTCGTGGAACTCTCAACTTGGATCAAGTGGTAGTGGAGTCCCAGGGACTCTGAGCAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS GCA 72 bp | TTAATTTTATTCTGTACAGTTGGCCTCCCCAGGGTGTaGTGCCCTGCAGTATCACACACTGGCTGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LILFCTVGLPRV*CPAVSHTGCSE Trigger: CTCTGAGCAGCCAGTGTGTGATACTGCAGGGCAGCACACCCTGGGGAGGCCAACTGTACAGAATAAAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 72 bp | GAGGAGAGAGGCCCTATTTATCCTAGTATCTATGCCTaGGGTCCCAACTGGAACTTCTCCAGTTTTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EERGPIYPSIYA*GPNWNFSSFCT Trigger: GGTGCAAAAACTGGAGAAGTTCCAGTTGGGACCCCAGGCATAGATACTAGGATAAATAGGGCCTCTCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 72 bp | CCTATTTATCCTAGTATCTATGCCTGGGGTCCCAACTaGAACTTCTCCAGTTTTTGCACCGAAAGGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: PIYPSIYAWGPN*NFSSFCTERFT Trigger: TGTGAACCTTTCGGTGCAAAAACTGGAGAAGTTCCAGTTGGGACCCCAGGCATAGATACTAGGATAAATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CCA 72 bp | CAAGATTACTTATGTGAAACTGACTCCAAGAATCTTTaGGTTAAATTGATGCTCCTGGAGGAGAGAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QDYLCETDSKNL*VKLMLLEERGP Trigger: AGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATAAGTAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 72 bp | GTTGTAACAGTCCTGTTGAGGGGAGAGACTGCCATCTaGTTTCAGCAACTCATATTTCAAGTGACTTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVTVLLRGETAI*FQQLIFQVTFV Trigger: GACAAAAGTCACTTGAAATATGAGTTGCTGAAACAAGATGGCAGTCTCTCCCCTCAACAGGACTGTTACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 72 bp | TATGTGAAACTGACTCCAAGAATCTTTGGGTTAAATTaGTGCTCCTGGAGGAGAGAGGCCCTATTTATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: YVKLTPRIFGLN*CSWRREALFIL Trigger: TAGGATAAATAGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 72 bp | TTATGTGAAACTGACTCCAAGAATCTTTGGGTTAAATaGATGCTCCTGGAGGAGAGAGGCCCTATTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCETDSKNLWVK*MLLEERGPIYP Trigger: AGGATAAATAGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 90 bp | CAAGATTACTTATGTGAAACTGACTCCAAGAATCTTTGGGTTAAATaGATGCTCCTGGAGGAGAGAGGCCCTATTTATCCTAGTATCTAT | + |
|
Preference number: 6 (lower is better) Translates to: QDYLCETDSKNLWVK*MLLEERGPIYPSIY Trigger: ATAGATACTAGGATAAATAGGGCCTCTCTCCTCCAGGAGCATCAATTTAACCCAAAGATTCTTGGAGTCAGTTTCACATAAGTAATCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS TCA 72 bp | AGACTGCCATCTTGTTTCAGCAACTCATATTTCAAGTaGCTTTTGTCACTTGAAGCTGAAGCTAATCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLPSCFSNSYFK*LLSLEAEANPD Trigger: ATCAGGATTAGCTTCAGCTTCAAGTGACAAAAGTCACTTGAAATATGAGTTGCTGAAACAAGATGGCAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 90 bp | TGCCATCTTGTTTCAGCAACTCATATTTCAAGTGACTTTTGTCACTaGAAGCTGAAGCTAATCCTGATAGAAGCTGTAAACCACATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CHLVSATHISSDFCH*KLKLILIEAVNHIS Trigger: AGAAATGTGGTTTACAGCTTCTATCAGGATTAGCTTCAGCTTCAAGTGACAAAAGTCACTTGAAATATGAGTTGCTGAAACAAGATGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||
| CDS CAA 72 bp | GTTTCAGCAACTCATATTTCAAGTGACTTTTGTCACTaGAAGCTGAAGCTAATCCTGATAGAAGCTGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VSATHISSDFCH*KLKLILIEAVN Trigger: GTTTACAGCTTCTATCAGGATTAGCTTCAGCTTCAAGTGACAAAAGTCACTTGAAATATGAGTTGCTGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417820.1 |
||