Pregenerated sensors for LINC01422 (Homo sapiens)
Ensembl gene IDs: ENSG00000223704Ensembl transcript IDs: ENST00000434868.1, ENST00000653531.1, ENST00000658323.1, ENST00000664041.1, ENST00000664057.1, ENST00000670559.1, ENST00000671424.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTGATCCTCAGTCCTGTGTCCTCCCATTGTGCTACTCTGCCTCCTaGGTAGGGCCCGGGAGAGGACACCAGTGGCCCTTCAGAGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PDPQSCVLPLCYSAS*VGPGRGHQWPFRGG Trigger: ACCCCCTCTGAAGGGCCACTGGTGTCCTCTCCCGGGCCCTACTCAGGAGGCAGAGTAGCACAATGGGAGGACACAGGACTGAGGATCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 90 bp | CTACCCCTGCAGATCTCAGGAGGAGGGCTGTGGGATTCACAGAGATaGAGGCCAGGTCCCCTCCTTGCCTCACCTTTCTGGGCCAGCATT | + |
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Preference number: 5 (lower is better) Translates to: LPLQISGGGLWDSQR*RPGPLLASPFWASI Trigger: AATGCTGGCCCAGAAAGGTGAGGCAAGGAGGGGACCTGGCCTCCATCTCTGTGAATCCCACAGCCCTCCTCCTGAGATCTGCAGGGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 90 bp | CAGAGGGTAACTGCCCAGGGAAACCAAAACAGTGGAGTCCAAGGATaGGCAGTGGGAGTGGTCTGCCCCCGATGGCAGCCAACAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: QRVTAQGNQNSGVQG*AVGVVCPRWQPTEA Trigger: TGCCTCTGTTGGCTGCCATCGGGGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTTTTGGTTTCCCTGGGCAGTTACCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS GCA 90 bp | AGGAGGGCTGTGGGATTCACAGAGATGGAGGCCAGGTCCCCTCCTTaGCTCACCTTTCTGGGCCAGCATTTGAAAGGTACCTCTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RRAVGFTEMEARSPP*LTFLGQHLKGTSEA Trigger: GGCCTCAGAGGTACCTTTCAAATGCTGGCCCAGAAAGGTGAGGCAAGGAGGGGACCTGGCCTCCATCTCTGTGAATCCCACAGCCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | GTCTTATCTAGCCCTGGAACCAGACAGAGCTATACCTGTCCCAAGTaGTGGGCAGCTCTCACCATTCCCATGCACGCCAAGGGAGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLSSPGTRQSYTCPK*WAALTIPMHAKGGG Trigger: GCCCCCTCCCTTGGCGTGCATGGGAATGGTGAGAGCTGCCCATCACTTGGGACAGGTATAGCTCTGTCTGGTTCCAGGGCTAGATAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS GCA 90 bp | CCTCGGCAGGGAATGCAGTTGACTTTGGAACCAGCTGTCCTGGCATaGCCAGTACAGCAAATGTGGCTTAGACGTGAGCCCCAGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PRQGMQLTLEPAVLA*PVQQMWLRREPQSE Trigger: CTCAGACTGGGGCTCACGTCTAAGCCACATTTGCTGTACTGGGCATGCCAGGACAGCTGGTTCCAAAGTCAACTGCATTCCCTGCCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS GCA 90 bp | AGAGCTATACCTGTCCCAAGTGATGGGCAGCTCTCACCATTCCCATaGACGCCAAGGGAGGGGGCAGAGCAATTGTCCTTGATGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: RAIPVPSDGQLSPFP*TPREGAEQLSLMTQ Trigger: CTGGGTCATCAAGGACAATTGCTCTGCCCCCTCCCTTGGCGTGCATGGGAATGGTGAGAGCTGCCCATCACTTGGGACAGGTATAGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 90 bp | CCACAACTCCTGCCACAGGCAATCTGGCACCGAGAGAGATGGTGGTaGCCAAATTGTTCATACGGGGCCATTTGTGTGTCTGAGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: PQLLPQAIWHRERWW*PNCSYGAICVSESR Trigger: GCGGCTCTCAGACACACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAGGAGTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS CCA 90 bp | CAGCCACAACTCCTGCCACAGGCAATCTGGCACCGAGAGAGATGGTaGTGGCCAAATTGTTCATACGGGGCCATTTGTGTGTCTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QPQLLPQAIWHRERW*WPNCSYGAICVSES Trigger: GCTCTCAGACACACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAGGAGTTGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS CCA 90 bp | GGTCAGCCACAACTCCTGCCACAGGCAATCTGGCACCGAGAGAGATaGTGGTGGCCAAATTGTTCATACGGGGCCATTTGTGTGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GQPQLLPQAIWHRER*WWPNCSYGAICVSE Trigger: CTCAGACACACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAGGAGTTGTGGCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS TCA 90 bp | CCATCCCTCAGATTCTATTTGCAGGGCTGTCCCTGTCAGGACAGATaGAGCATCATCCAGTTAGGCAGGCTGTCCACCTGGCTGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PSLRFYLQGCPCQDR*SIIQLGRLSTWLSA Trigger: TGCTGACAGCCAGGTGGACAGCCTGCCTAACTGGATGATGCTTCATCTGTCCTGACAGGGACAGCCCTGCAAATAGAATCTGAGGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS CCA 90 bp | TTGACTTTGGAACCAGCTGTCCTGGCATGCCCAGTACAGCAAATGTaGCTTAGACGTGAGCCCCAGTCTGAGGACTTAGGGTCAGCCACA | + |
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Preference number: 5 (lower is better) Translates to: LTLEPAVLACPVQQM*LRREPQSEDLGSAT Trigger: TGTGGCTGACCCTAAGTCCTCAGACTGGGGCTCACGTCTAAGCCACATTTGCTGTACTGGGCATGCCAGGACAGCTGGTTCCAAAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS TCA 90 bp | AGGTGGAGACTCAGGAGAGCCAACGTATGGTTTTATTTCAGGTCCTaGGGCCACCCAGCAGGTCCACCGCATGAACTAGAATGTAGACCG | + |
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Preference number: 5 (lower is better) Translates to: RWRLRRANVWFYFRS*GHPAGPPHELECRP Trigger: CGGTCTACATTCTAGTTCATGCGGTGGACCTGCTGGGTGGCCTCAGGACCTGAAATAAAACCATACGTTGGCTCTCCTGAGTCTCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000664057.1 |
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| CDS TCA 90 bp | CCTACTAGACTGCCTCATTATCCCTTTCCCTGGTACCAACTGTTGTaGGGATTCAAAGGATGGTGCGGCAGGACTGAAGCCTTCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PTRLPHYPFPWYQLL*GFKGWCGRTEAFLE Trigger: CTCCAAGAAGGCTTCAGTCCTGCCGCACCATCCTTTGAATCCTCACAACAGTTGGTACCAGGGAAAGGGATAATGAGGCAGTCTAGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | CTACTGCTGTTTCAGCCTGGAACATTGTTGATATTGGGCTCAGGCTaGGAATCTTCACTTGCCCAGACAGAGGGTAACTGCCCAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LLLFQPGTLLILGSG*ESSLAQTEGNCPGK Trigger: TTTCCCTGGGCAGTTACCCTCTGTCTGGGCAAGTGAAGATTCTCAGCCTGAGCCCAATATCAACAATGTTCCAGGCTGAAACAGCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS GCA 90 bp | ACTCTCTCACTGAATCTTCACAACAACCAACGAGGATGTCTTCTATaGCCCACGATCCCCACTTTGCAGTTGAAGAAACTGAGGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: TLSLNLHNNQRGCLL*PTIPTLQLKKLRPP Trigger: GGGTGGCCTCAGTTTCTTCAACTGCAAAGTGGGGATCGTGGGGCATAGAAGACATCCTCGTTGGTTGTTGTGAAGATTCAGTGAGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 90 bp | GGAGATGACCTTGTAGAATGTATGGGAAAGGGTGATCTGCTGGACTaGATGAGCAACGTCAACACAAACAAAAAGCAGGTCAGGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GDDLVECMGKGDLLD*MSNVNTNKKQVRAG Trigger: CCCAGCCCTGACCTGCTTTTTGTTTGTGTTGACGTTGCTCATCCAGTCCAGCAGATCACCCTTTCCCATACATTCTACAAGGTCATCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | CTGGTACCAACTGTTGTGAGGATTCAAAGGATGGTGCGGCAGGACTaGAGCCTTCTTGGAGGAGATGACCTTGTAGAATGTATGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LVPTVVRIQRMVRQD*SLLGGDDLVECMGK Trigger: CTTTCCCATACATTCTACAAGGTCATCTCCTCCAAGAAGGCTTCAGTCCTGCCGCACCATCCTTTGAATCCTCACAACAGTTGGTACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 90 bp | CCCAAGAAGCTTACATATAGCAGTGTGTCTGTAGTTGGTTCCTTCTaGTGGGTTCTTGGTCTCGCTGACTTCCAGAATGAAACCACGGAC | + |
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Preference number: 5 (lower is better) Translates to: PKKLTYSSVSVVGSF*WVLGLADFQNETTD Trigger: GTCCGTGGTTTCATTCTGGAAGTCAGCGAGACCAAGAACCCACCAGAAGGAACCAACTACAGACACACTGCTATATGTAAGCTTCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | GACAGAAAGTTTCAGTCAATGGTTTGGAAAGCCGGGGTCCCTAAATaGCACCAGCAAACAGATACTGATGTTCTGGGGTTGGAGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: DRKFQSMVWKAGVPK*HQQTDTDVLGLENL Trigger: CAAGTTCTCCAACCCCAGAACATCAGTATCTGTTTGCTGGTGTCATTTAGGGACCCCGGCTTTCCAAACCATTGACTGAAACTTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 90 bp | CTCTTTGTCAGAGCACTACCTACCACAGCTCTTTGTAGCCATCCTTaGACTGAGCTAAACCTACCTCCTGAATACTCTATCCCCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: LFVRALPTTALCSHP*TELNLPPEYSIPHL Trigger: TAAATGGGGGATAGAGTATTCAGGAGGTAGGTTTAGCTCAGTCCAAGGATGGCTACAAAGAGCTGTGGTAGGTAGTGCTCTGACAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
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| CDS CCA 90 bp | AACCGTTCAGAAATGGGCAGACAATTGGCTACTGCTGTTTCAGCCTaGAACATTGTTGATATTGGGCTCAGGCTGAGAATCTTCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: NRSEMGRQLATAVSA*NIVDIGLRLRIFTC Trigger: GCAAGTGAAGATTCTCAGCCTGAGCCCAATATCAACAATGTTCCAGGCTGAAACAGCAGTAGCCAATTGTCTGCCCATTTCTGAACGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS TCA 90 bp | ATGGTAGATCATTCCTGCCTTCCTGAAACCACAGCATCCTGGAATTaGAGGGATCTTCTAGACCAATTCCCCCTGAATTTCCCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MVDHSCLPETTASWN*RDLLDQFPLNFPFS Trigger: AGAGAAAGGGAAATTCAGGGGGAATTGGTCTAGAAGATCCCTTCAATTCCAGGATGCTGTGGTTTCAGGAAGGCAGGAATGATCTACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
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| CDS TCA 90 bp | TTGAGATGGGGCACAATATACGTTAAGTTCTACACACACAGGGCCTaGAGTCAGAGTTTAACTCTGCTTTTTACCAGCTGTGTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LRWGTIYVKFYTHRA*SQSLTLLFTSCVSL Trigger: CAGGGACACACAGCTGGTAAAAAGCAGAGTTAAACTCTGACTTCAGGCCCTGTGTGTGTAGAACTTAACGTATATTGTGCCCCATCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | CACACCTCCCATTCCCAGAGCATTTCCTGTGATCCTTCTTCCAACTaGAACCCACATCAACTCTTGGAGCTGGTCATCATTCTTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: HTSHSQSISCDPSSN*NPHQLLELVIILLF Trigger: AAAAAGAAGAATGATGACCAGCTCCAAGAGTTGATGTGGGTTTCAGTTGGAAGAAGGATCACAGGAAATGCTCTGGGAATGGGAGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS GCA 90 bp | AGACATAGGGAGACTATATTTATGGAGGCTGAGAAGTCCCAAATCTaGAGTCAAGAAGGTGGAGACTCAGGAGAGCCAACGTATGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RHRETIFMEAEKSQI*SQEGGDSGEPTYGF Trigger: AAAACCATACGTTGGCTCTCCTGAGTCTCCACCTTCTTGACTGCAGATTTGGGACTTCTCAGCCTCCATAAATATAGTCTCCCTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664057.1 |
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| CDS GCA 90 bp | CTAACAAGATTTCAATTTGAGCTTTTAAATATTTCATGCTACCCCTaGAGATCTCAGGAGGAGGGCTGTGGGATTCACAGAGATGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LTRFQFELLNISCYP*RSQEEGCGIHRDGG Trigger: GCCTCCATCTCTGTGAATCCCACAGCCCTCCTCCTGAGATCTGCAGGGGTAGCATGAAATATTTAAAAGCTCAAATTGAAATCTTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS GCA 90 bp | GACCTGGCTCTAACAAGATTTCAATTTGAGCTTTTAAATATTTCATaGTACCCCTGCAGATCTCAGGAGGAGGGCTGTGGGATTCACAGA | + |
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Preference number: 5 (lower is better) Translates to: DLALTRFQFELLNIS*YPCRSQEEGCGIHR Trigger: TCTGTGAATCCCACAGCCCTCCTCCTGAGATCTGCAGGGGTAGCATGAAATATTTAAAAGCTCAAATTGAAATCTTGTTAGAGCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS GCA 90 bp | TTGCAGTTGAAGAAAATATTTATGGAGGCTGAGAAGTCCCAAATCTaGAGTCAAGAAGGTGGAGACTCAGGAGAGCCAACGTATGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LQLKKIFMEAEKSQI*SQEGGDSGEPTYGF Trigger: AAAACCATACGTTGGCTCTCCTGAGTCTCCACCTTCTTGACTGCAGATTTGGGACTTCTCAGCCTCCATAAATATTTTCTTCAACTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658323.1 |
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| CDS CCA 90 bp | TACAGTTCCAGAATAGTAAGAACCGTTCAGAAATGGGCAGACAATTaGCTACTGCTGTTTCAGCCTGGAACATTGTTGATATTGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: YSSRIVRTVQKWADN*LLLFQPGTLLILGS Trigger: TGAGCCCAATATCAACAATGTTCCAGGCTGAAACAGCAGTAGCCAATTGTCTGCCCATTTCTGAACGGTTCTTACTATTCTGGAACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS TCA 90 bp | GACCTAAATAGACACTTCTCAGAAGAAGATCTACGAATGGACAAATaGGGAATTAAAAAGTGCTGGTCATCGCTAATCATCAGGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: DLNRHFSEEDLRMDK*GIKKCWSSLIIREM Trigger: CATTTCCCTGATGATTAGCGATGACCAGCACTTTTTAATTCCTCATTTGTCCATTCGTAGATCTTCTTCTGAGAAGTGTCTATTTAGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 90 bp | ATGTCAAGAACTCACTCTCTCTTGATTCTGATGTACATAGAATCTTaGTTCAGTTTGTACATAGCTGGACCATATAGCAGTGTGTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: MSRTHSLLILMYIES*FSLYIAGPYSSVSV Trigger: TACAGACACACTGCTATATGGTCCAGCTATGTACAAACTGAATCAAGATTCTATGTACATCAGAATCAAGAGAGAGTGAGTTCTTGACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653531.1 ENST00000658323.1 ENST00000664041.1 ENST00000664057.1 ENST00000670559.1 ENST00000671424.1 |
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| CDS CCA 90 bp | AACAGTATGGGAGTTCCTCAGAAAACTAAAAATAGGATTACCATGTaGGGTGTATATCCAAAGGAATTGAAATCCTATGCCCAAGAGATA | + |
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Preference number: 5 (lower is better) Translates to: NSMGVPQKTKNRITM*GVYPKELKSYAQEI Trigger: TATCTCTTGGGCATAGGATTTCAATTCCTTTGGATATACACCCCACATGGTAATCCTATTTTTAGTTTTCTGAGGAACTCCCATACTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 90 bp | TTATGGATGAGAAAATTGAGTTTCAATGATATGCCCAAGTTCATATaGCTAGTAAGAGGCAATGCCAGAATTAGGTTCCAAGTATCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LWMRKLSFNDMPKFI*LVRGNARIRFQVSC Trigger: GCAAGATACTTGGAACCTAATTCTGGCATTGCCTCTTACTAGCCATATGAACTTGGGCATATCATTGAAACTCAATTTTCTCATCCATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS TCA 90 bp | GTGAGGGAGAAAGCTTTGAAAGGTAAACACTTTGAAAAGCCATTTTaGGGATCTGCCCTGTCAATTGAGAATTTACTACATTCCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: VREKALKGKHFEKPF*GSALSIENLLHSIK Trigger: TTTAATGGAATGTAGTAAATTCTCAATTGACAGGGCAGATCCTCAAAATGGCTTTTCAAAGTGTTTACCTTTCAAAGCTTTCTCCCTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 72 bp | CAGTCCTGTGTCCTCCCATTGTGCTACTCTGCCTCCTaGGTAGGGCCCGGGAGAGGACACCAGTGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QSCVLPLCYSAS*VGPGRGHQWPF Trigger: GAAGGGCCACTGGTGTCCTCTCCCGGGCCCTACTCAGGAGGCAGAGTAGCACAATGGGAGGACACAGGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS GCA 72 bp | AACAGTGGAGTCCAAGGATGGGCAGTGGGAGTGGTCTaGCCCCGATGGCAGCCAACAGAGGCATGCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: NSGVQGWAVGVV*PRWQPTEACRD Trigger: GTCTCTGCATGCCTCTGTTGGCTGCCATCGGGGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS CCA 72 bp | ACTGCCCAGGGAAACCAAAACAGTGGAGTCCAAGGATaGGCAGTGGGAGTGGTCTGCCCCCGATGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TAQGNQNSGVQG*AVGVVCPRWQP Trigger: TGGCTGCCATCGGGGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTTTTGGTTTCCCTGGGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS GCA 72 bp | CCTGTCCCAAGTGATGGGCAGCTCTCACCATTCCCATaGACGCCAAGGGAGGGGGCAGAGCAATTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PVPSDGQLSPFP*TPREGAEQLSL Trigger: CAAGGACAATTGCTCTGCCCCCTCCCTTGGCGTGCATGGGAATGGTGAGAGCTGCCCATCACTTGGGACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 72 bp | CAGATCTCAGGAGGAGGGCTGTGGGATTCACAGAGATaGAGGCCAGGTCCCCTCCTTGCCTCACCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QISGGGLWDSQR*RPGPLLASPFW Trigger: CCAGAAAGGTGAGGCAAGGAGGGGACCTGGCCTCCATCTCTGTGAATCCCACAGCCCTCCTCCTGAGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 72 bp | ACCAAAACAGTGGAGTCCAAGGATGGGCAGTGGGAGTaGTCTGCCCCCGATGGCAGCCAACAGAGGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: TKTVESKDGQWE*SAPDGSQQRHA Trigger: TGCATGCCTCTGTTGGCTGCCATCGGGGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTTTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS CCA 72 bp | AGGGAAACCAAAACAGTGGAGTCCAAGGATGGGCAGTaGGAGTGGTCTGCCCCCGATGGCAGCCAACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RETKTVESKDGQ*EWSAPDGSQQR Trigger: CCTCTGTTGGCTGCCATCGGGGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTTTTGGTTTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS CAA 72 bp | AGGTCCCCTCCTTGCCTCACCTTTCTGGGCCAGCATTaGAAAGGTACCTCTGAGGCCACCCAGCAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RSPPCLTFLGQH*KGTSEATQQVH Trigger: GTGGACCTGCTGGGTGGCCTCAGAGGTACCTTTCAAATGCTGGCCCAGAAAGGTGAGGCAAGGAGGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 72 bp | CAGACAGAGGGTAACTGCCCAGGGAAACCAAAACAGTaGAGTCCAAGGATGGGCAGTGGGAGTGGTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QTEGNCPGKPKQ*SPRMGSGSGLP Trigger: GGGCAGACCACTCCCACTGCCCATCCTTGGACTCCACTGTTTTGGTTTCCCTGGGCAGTTACCCTCTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
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| CDS TCA 72 bp | AGCCCTGGAACCAGACAGAGCTATACCTGTCCCAAGTaGTGGGCAGCTCTCACCATTCCCATGCACGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPGTRQSYTCPK*WAALTIPMHAK Trigger: CTTGGCGTGCATGGGAATGGTGAGAGCTGCCCATCACTTGGGACAGGTATAGCTCTGTCTGGTTCCAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 72 bp | GAACCAGCTGTCCTGGCATGCCCAGTACAGCAAATGTaGCTTAGACGTGAGCCCCAGTCTGAGGACTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: EPAVLACPVQQM*LRREPQSEDLG Trigger: CCCTAAGTCCTCAGACTGGGGCTCACGTCTAAGCCACATTTGCTGTACTGGGCATGCCAGGACAGCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
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| CDS TCA 72 bp | CCCACCTACTCGGGAGGCAGAGGCAGGAGAACTACTTaGACTCTGGAGGCAAAGGTTGCAATGAGGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PTYSGGRGRRTT*TLEAKVAMRGD Trigger: ATCTCCCCTCATTGCAACCTTTGCCTCCAGAGTTCAAGTAGTTCTCCTGCCTCTGCCTCCCGAGTAGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS GCA 72 bp | GGAGTGGTCTGCCCCCGATGGCAGCCAACAGAGGCATaGAGAGACTGTAGAGAACATAAAAGCAATAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVVCPRWQPTEA*RDCREHKSNRP Trigger: CGGCCTATTGCTTTTATGTTCTCTACAGTCTCTGCATGCCTCTGTTGGCTGCCATCGGGGGCAGACCACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
||
| CDS CCA 72 bp | CTCCTGCCACAGGCAATCTGGCACCGAGAGAGATGGTaGTGGCCAAATTGTTCATACGGGGCCATTTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPQAIWHRERW*WPNCSYGAICV Trigger: CACACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS CAA 72 bp | TCCCACCTACTCGGGAGGCAGAGGCAGGAGAACTACTaGAACTCTGGAGGCAAAGGTTGCAATGAGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHLLGRQRQENY*NSGGKGCNEGR Trigger: TCTCCCCTCATTGCAACCTTTGCCTCCAGAGTTCAAGTAGTTCTCCTGCCTCTGCCTCCCGAGTAGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | TTCCCAGGCTCAGGTGGTCCTTTCACATCAGCCTCCTaGGTATCTGGGACCACAGGTATGTACCACTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPGSGGPFTSAS*VSGTTGMYHYA Trigger: GGCATAGTGGTACATACCTGTGGTCCCAGATACTCAGGAGGCTGATGTGAAAGGACCACCTGAGCCTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS GCA 72 bp | GGAATGCAGTTGACTTTGGAACCAGCTGTCCTGGCATaGCCAGTACAGCAAATGTGGCTTAGACGTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMQLTLEPAVLA*PVQQMWLRREP Trigger: GGGCTCACGTCTAAGCCACATTTGCTGTACTGGGCATGCCAGGACAGCTGGTTCCAAAGTCAACTGCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS CCA 72 bp | CTGCCACAGGCAATCTGGCACCGAGAGAGATGGTGGTaGCCAAATTGTTCATACGGGGCCATTTGTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPQAIWHRERWW*PNCSYGAICVS Trigger: AGACACACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS CCA 72 bp | CAACTCCTGCCACAGGCAATCTGGCACCGAGAGAGATaGTGGTGGCCAAATTGTTCATACGGGGCCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLLPQAIWHRER*WWPNCSYGAIC Trigger: ACAAATGGCCCCGTATGAACAATTTGGCCACCACCATCTCTCTCGGTGCCAGATTGCCTGTGGCAGGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS TCA 72 bp | CTGCCTCATTATCCCTTTCCCTGGTACCAACTGTTGTaGGGATTCAAAGGATGGTGCGGCAGGACTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPHYPFPWYQLL*GFKGWCGRTEA Trigger: GGCTTCAGTCCTGCCGCACCATCCTTTGAATCCTCACAACAGTTGGTACCAGGGAAAGGGATAATGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | CTCAGGAGAGCCAACGTATGGTTTTATTTCAGGTCCTaGGGCCACCCAGCAGGTCCACCGCATGAACTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRRANVWFYFRS*GHPAGPPHELE Trigger: TTCTAGTTCATGCGGTGGACCTGCTGGGTGGCCTCAGGACCTGAAATAAAACCATACGTTGGCTCTCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000664057.1 |
||
| CDS TCA 72 bp | AGATTCTATTTGCAGGGCTGTCCCTGTCAGGACAGATaGAGCATCATCCAGTTAGGCAGGCTGTCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RFYLQGCPCQDR*SIIQLGRLSTW Trigger: CCAGGTGGACAGCCTGCCTAACTGGATGATGCTTCATCTGTCCTGACAGGGACAGCCCTGCAAATAGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS TCA 72 bp | GGCTTTCCCCATCAGCTATGGCCTACAGAAAGCAGTTaGTGTACTAAGGTCACCCAGCCAGGAATCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GFPHQLWPTESS*CTKVTQPGIKP Trigger: GGGCTTGATTCCTGGCTGGGTGACCTTAGTACATCAACTGCTTTCTGTAGGCCATAGCTGATGGGGAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671424.1 |
||
| CDS CCA 72 bp | TCTGAGATGAGTGGAAGAGAGTCCCACCAGACTCAGTaGAAGGACACGATGACTCCAATAGGTCTGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SEMSGRESHQTQ*KDTMTPIGLPS Trigger: GGATGGCAGACCTATTGGAGTCATCGTGTCCTTCCACTGAGTCTGGTGGGACTCTCTTCCACTCATCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS TCA 72 bp | TCAGAAAAGAAGGGAGAGTGGTTTGTGCACATTAGGTaGGGGGAGGTGGAATGGGAGAACCAGTTGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SEKKGEWFVHIR*GEVEWENQLGW Trigger: CCAACCCAACTGGTTCTCCCATTCCACCTCCCCTCACCTAATGTGCACAAACCACTCTCCCTTCTTTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS TCA 72 bp | GGGAAGAGGGCTCAGACAGAGGAAAGGCAAAAGCCCTaGATGTTTGTGAGTCAGAAAAGAAGGGAGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GKRAQTEERQKP*MFVSQKRRESG Trigger: ACCACTCTCCCTTCTTTTCTGACTCACAAACATTCAGGGCTTTTGCCTTTCCTCTGTCTGAGCCCTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS CAA 72 bp | AGCACTGACTGTTGTGAAGCAGTAAACAGAGCTCCCTaGGAGCACCTCCCTTCCTCTTCACAACAGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: STDCCEAVNRAP*EHLPSSSQQFC Trigger: ACAGAACTGTTGTGAAGAGGAAGGGAGGTGCTCCAAGGGAGCTCTGTTTACTGCTTCACAACAGTCAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | CTTGGAGCACCTCCCTTCCTCTTCACAACAGTTCTGTaGGGCAGGGGTGGTTATATCCATTTTACAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAPPFLFTTVL*GRGGYIHFTDV Trigger: CACATCTGTAAAATGGATATAACCACCCCTGCCTCACAGAACTGTTGTGAAGAGGAAGGGAGGTGCTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | TTTCAGCCTGGAACATTGTTGATATTGGGCTCAGGCTaGGAATCTTCACTTGCCCAGACAGAGGGTAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: FQPGTLLILGSG*ESSLAQTEGNC Trigger: GCAGTTACCCTCTGTCTGGGCAAGTGAAGATTCTCAGCCTGAGCCCAATATCAACAATGTTCCAGGCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
||
| CDS TCA 72 bp | CACAAATCTATTTTTAATGAAGGCTGGGCATGGGGGTaGGCACAGCCACATCTGAAGCACTTCTGTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HKSIFNEGWAWG*AQPHLKHFCSL Trigger: CAGGGAACAGAAGTGCTTCAGATGTGGCTGTGCTCACCCCCATGCCCAGCCTTCATTAAAAATAGATTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671424.1 |
||
| CDS GCA 72 bp | ATGTTTGTGAGTCAGAAAAGAAGGGAGAGTGGTTTGTaGACATTAGGTGAGGGGAGGTGGAATGGGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: MFVSQKRRESGL*TLGEGRWNGRT Trigger: GGTTCTCCCATTCCACCTCCCCTCACCTAATGTGCACAAACCACTCTCCCTTCTTTTCTGACTCACAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS GCA 72 bp | GAGACTATATTTATGGAGGCTGAGAAGTCCCAAATCTaGAGTCAAGAAGGTGGAGACTCAGGAGAGCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: ETIFMEAEKSQI*SQEGGDSGEPT Trigger: CGTTGGCTCTCCTGAGTCTCCACCTTCTTGACTGCAGATTTGGGACTTCTCAGCCTCCATAAATATAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664057.1 |
||
| CDS CCA 72 bp | CCATATAGCAGTGTGTCTGTAGTTGGTTCCTTCTGGTaGGTTCTTGGTCTCGCTGACTTCCAGAATGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: PYSSVSVVGSFW*VLGLADFQNET Trigger: GGTTTCATTCTGGAAGTCAGCGAGACCAAGAACCCACCAGAAGGAACCAACTACAGACACACTGCTATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653531.1 ENST00000658323.1 ENST00000664041.1 ENST00000664057.1 ENST00000670559.1 ENST00000671424.1 |
||
| CDS CAA 72 bp | TACGGGGCCATTTGTGTGTCTGAGAGCCGCAAGCGCTaGTCCAGTAGTTCAGATGATGGAATGTGTATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YGAICVSESRKR*SSSSDDGMCIS Trigger: AGAAATACACATTCCATCATCTGAACTACTGGACAAGCGCTTGCGGCTCTCAGACACACAAATGGCCCCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS CAA 90 bp | AACTTGTCTGGACCGTTCATGTTGCCCAGGAGAGCCTTGCAGAAATaGAGAGCATCCCTTCTGAGGTTTAACAGAAAAATCCTCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLSGPFMLPRRALQK*RASLLRFNRKILHG Trigger: GCCATGGAGGATTTTTCTGTTAAACCTCAGAAGGGATGCTCTCAATTTCTGCAAGGCTCTCCTGGGCAACATGAACGGTCCAGACAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS TCA 72 bp | TTTCAGTCAATGGTTTGGAAAGCCGGGGTCCCTAAATaGCACCAGCAAACAGATACTGATGTTCTGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FQSMVWKAGVPK*HQQTDTDVLGL Trigger: CAACCCCAGAACATCAGTATCTGTTTGCTGGTGTCATTTAGGGACCCCGGCTTTCCAAACCATTGACTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | ACAATTGGCTACTGCTGTTTCAGCCTGGAACATTGTTaGTATTGGGCTCAGGCTGAGAATCTTCACTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TIGYCCFSLEHC*YWAQAENLHLP Trigger: GGGCAAGTGAAGATTCTCAGCCTGAGCCCAATATCAACAATGTTCCAGGCTGAAACAGCAGTAGCCAATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
||
| CDS GCA 72 bp | CTGAATCTTCACAACAACCAACGAGGATGTCTTCTATaGCCCACGATCCCCACTTTGCAGTTGAAGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LNLHNNQRGCLL*PTIPTLQLKKL Trigger: CAGTTTCTTCAACTGCAAAGTGGGGATCGTGGGGCATAGAAGACATCCTCGTTGGTTGTTGTGAAGATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671424.1 |
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| CDS CCA 72 bp | AGAGCACTACCTACCACAGCTCTTTGTAGCCATCCTTaGACTGAGCTAAACCTACCTCCTGAATACTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: RALPTTALCSHP*TELNLPPEYSI Trigger: GATAGAGTATTCAGGAGGTAGGTTTAGCTCAGTCCAAGGATGGCTACAAAGAGCTGTGGTAGGTAGTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS CCA 72 bp | ACATATAGCAGTGTGTCTGTAGTTGGTTCCTTCTGGTaGGTTCTTGGTCTCGCTGACTTCCAGAATGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: TYSSVSVVGSFW*VLGLADFQNET Trigger: GGTTTCATTCTGGAAGTCAGCGAGACCAAGAACCCACCAGAAGGAACCAACTACAGACACACTGCTATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CAA 90 bp | AATTGTTCATACGGGGCCATTTGTGTGTCTGAGAGCCGCAAGCGCTaGTCCAGTAGTTCAGATGATGGAATGTGTATTTCTCGTAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: NCSYGAICVSESRKR*SSSSDDGMCISRNG Trigger: TCCATTACGAGAAATACACATTCCATCATCTGAACTACTGGACAAGCGCTTGCGGCTCTCAGACACACAAATGGCCCCGTATGAACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS TCA 72 bp | AATAGACTCATATACCAATGTGGATCACTTCTACACTaGTCCACAGCATGCCAGGTGGGGCAAAAGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NRLIYQCGSLLH*STACQVGQKSS Trigger: ACTGCTCTTTTGCCCCACCTGGCATGCTGTGGATCAGTGTAGAAGTGATCCACATTGGTATATGAGTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS GCA 72 bp | AAGAAAATATTTATGGAGGCTGAGAAGTCCCAAATCTaGAGTCAAGAAGGTGGAGACTCAGGAGAGCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: KKIFMEAEKSQI*SQEGGDSGEPT Trigger: CGTTGGCTCTCCTGAGTCTCCACCTTCTTGACTGCAGATTTGGGACTTCTCAGCCTCCATAAATATTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658323.1 |
||
| CDS CCA 72 bp | CTTGTAGAATGTATGGGAAAGGGTGATCTGCTGGACTaGATGAGCAACGTCAACACAAACAAAAAGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVECMGKGDLLD*MSNVNTNKKQV Trigger: GACCTGCTTTTTGTTTGTGTTGACGTTGCTCATCCAGTCCAGCAGATCACCCTTTCCCATACATTCTACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS CCA 72 bp | TTATATGTGAAATCTAAAGAAGTTGAGAGCGTAGAATaGTGGTTACCAGAGGCTGGGGGAAGCAGGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LYVKSKEVESVE*WLPEAGGSRWV Trigger: TACCCACCTGCTTCCCCCAGCCTCTGGTAACCACCATTCTACGCTCTCAACTTCTTTAGATTTCACATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS CAA 72 bp | AACCAAACACCGCATGTTCTCACTCATAAGTGGGCATaGAACAAAGAGAATACATGGACACAGGGAGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: NQTPHVLTHKWA*NKENTWTQGGE Trigger: TTCCCCTCCCTGTGTCCATGTATTCTCTTTGTTCAATGCCCACTTATGAGTGAGAACATGCGGTGTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS CAA 90 bp | AAATTAACTGAGTTACACTTGAATATCCCCACGACAGGGAACTCTTaGTCAGAGCACTACCTACCACAGCTCTTTGTAGCCATCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLTELHLNIPTTGNS*SEHYLPQLFVAILG Trigger: TCCAAGGATGGCTACAAAGAGCTGTGGTAGGTAGTGCTCTGACAAAGAGTTCCCTGTCGTGGGGATATTCAAGTGTAACTCAGTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS CAA 90 bp | GACCATGCTCAGAACATCCCCAACAAGAAATTAACTGAGTTACACTaGAATATCCCCACGACAGGGAACTCTTTGTCAGAGCACTACCTA | + |
|
Preference number: 6 (lower is better) Translates to: DHAQNIPNKKLTELH*NIPTTGNSLSEHYL Trigger: TAGGTAGTGCTCTGACAAAGAGTTCCCTGTCGTGGGGATATTCAAGTGTAACTCAGTTAATTTCTTGTTGGGGATGTTCTGAGCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS CAA 90 bp | CTACAGTTCCAGAATAGTAAGAACCGTTCAGAAATGGGCAGACAATaGGCTACTGCTGTTTCAGCCTGGAACATTGTTGATATTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQFQNSKNRSEMGRQ*ATAVSAWNIVDIGL Trigger: GAGCCCAATATCAACAATGTTCCAGGCTGAAACAGCAGTAGCCAATTGTCTGCCCATTTCTGAACGGTTCTTACTATTCTGGAACTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664041.1 ENST00000664057.1 |
||
| CDS TCA 72 bp | TCCATGTGTTCTCACTGTTCAATTCCCACCTATGAGTaGGAACATGCGGTGTTTGGTTTTCTGTCCTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SMCSHCSIPTYE*EHAVFGFLSLQ Trigger: TTGCAAGGACAGAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAGTGAGAACACATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653531.1 |
||
| CDS TCA 72 bp | TGTGTCCATGTGTTCTCACTGTTCAATTCCCACCTATaGGTGAGAACATGCGGTGTTTGGTTTTCTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CVHVFSLFNSHL*VRTCGVWFSVL Trigger: AAGGACAGAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAGTGAGAACACATGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653531.1 |
||
| CDS TCA 72 bp | CCCCACTTTGCAGTTGAAGAAAATATTTATGGAGGCTaGGAAGTCCCAAATCTGCAGTCAAGAAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PHFAVEENIYGG*EVPNLQSRRWR Trigger: TCTCCACCTTCTTGACTGCAGATTTGGGACTTCTCAGCCTCCATAAATATTTTCTTCAACTGCAAAGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658323.1 |
||
| CDS GCA 72 bp | CTGAATCTTCACAACAACCAACGAGGATGTCTTCTATaGCCCACGATCCCCACTTTGCAGTTGAAGAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LNLHNNQRGCLL*PTIPTLQLKKI Trigger: TATTTTCTTCAACTGCAAAGTGGGGATCGTGGGGCATAGAAGACATCCTCGTTGGTTGTTGTGAAGATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658323.1 |
||
| CDS CAA 72 bp | ACAGCATTAGGAGAAATACCTAATGTAGATGACAGGTaGATGGGTGCAGCAAACCACCCTGGCATGTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: TALGEIPNVDDR*MGAANHPGMCI Trigger: TATACACATGCCAGGGTGGTTTGCTGCACCCATCAACCTGTCATCTACATTAGGTATTTCTCCTAATGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | GCCCCTTATCTGCTGGATTGCTTTGAGCAAACACTTTaGGTCTTGTTTCTTTGTAACTGGTCAATGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APYLLDCFEQTL*VLFLCNWSMKQ Trigger: CTGCTTCATTGACCAGTTACAAAGAAACAAGACTCAAAGTGTTTGCTCAAAGCAATCCAGCAGATAAGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670559.1 |
||
| CDS CCA 72 bp | AGAGTGCTGATTGGTCCATTTTACAGAGTTGCTGATTaGTGCATTTACAATCCTTTGGCTAGACACAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVLIGPFYRVAD*CIYNPLARHKA Trigger: CGCTTTGTGTCTAGCCAAAGGATTGTAAATGCACCAATCAGCAACTCTGTAAAATGGACCAATCAGCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
||
| CDS CAA 72 bp | CAGCAAACAGATACTGATGTTCTGGGGTTGGAGAACTaGGCTTTACAAGACCTGGCTCTAACAAGATTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQTDTDVLGLEN*ALQDLALTRFQ Trigger: TTGAAATCTTGTTAGAGCCAGGTCTTGTAAAGCCAAGTTCTCCAACCCCAGAACATCAGTATCTGTTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS CAA 72 bp | GTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTaGGTTTTCTGTCCTTGCAATAGTTTGACAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQFPPMSENMRC*VFCPCNSLTVC Trigger: GCAAACTGTCAAACTATTGCAAGGACAGAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653531.1 |
||
| CDS GCA 72 bp | GCCAGGTCTCTTCTCTCTCTGAAGTTCTTCCTCATCTaGAAAAATGTGACAGTGGTGACTGTCTTATTATAT | + |
|
Preference number: 6 (lower is better) Translates to: ARSLLSLKFFLI*KNVTVVTVLLY Trigger: ATATAATAAGACAGTCACCACTGTCACATTTTTGCAGATGAGGAAGAACTTCAGAGAGAGAAGAGACCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670559.1 |
||
| CDS CAA 90 bp | GCCGACAAAGGTATTATTAAGTTAAATTACCCTAAAAGTGTTGGATaGACAGAAAGTTTCAGTCAATGGTTTGGAAAGCCGGGGTCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: ADKGIIKLNYPKSVG*TESFSQWFGKPGSL Trigger: TAGGGACCCCGGCTTTCCAAACCATTGACTGAAACTTTCTGTCAATCCAACACTTTTAGGGTAATTTAACTTAATAATACCTTTGTCGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
||
| CDS TCA 72 bp | ACAGAGAATTGCTTTAAGAACTGGTCACTCTCTCACTaGATCTTCACAACAACCAACGAGGATGTCTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TENCFKNWSLSH*IFTTTNEDVFY Trigger: ATAGAAGACATCCTCGTTGGTTGTTGTGAAGATTCAGTGAGAGAGTGACCAGTTCTTAAAGCAATTCTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658323.1 ENST00000671424.1 |
||
| CDS CCA 72 bp | TTGAGATCATGGTCAAAGAAAGGCATTAGAGTTTCATaGTTGAGAGCAAAGTTAGACAGGTGTGAGTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRSWSKKGIRVS*LRAKLDRCEFV Trigger: CACAAACTCACACCTGTCTAACTTTGCTCTCAACCATGAAACTCTAATGCCTTTCTTTGACCATGATCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670559.1 |
||
| CDS CAA 72 bp | TTTTACAGAGTTGCTGATTGGTGCATTTACAATCCTTaGGCTAGACACAAAGCGCTGATTGGTGCATTTACA | + |
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Preference number: 6 (lower is better) Translates to: FYRVADWCIYNP*ARHKALIGAFT Trigger: TGTAAATGCACCAATCAGCGCTTTGTGTCTAGCCAAAGGATTGTAAATGCACCAATCAGCAACTCTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434868.1 ENST00000653531.1 |
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| CDS CAA 72 bp | AGATCATGGTCAAAGAAAGGCATTAGAGTTTCATGGTaGAGAGCAAAGTTAGACAGGTGTGAGTTTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSWSKKGIRVSW*RAKLDRCEFVS Trigger: AGACACAAACTCACACCTGTCTAACTTTGCTCTCAACCATGAAACTCTAATGCCTTTCTTTGACCATGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS TCA 72 bp | ATAGGATTACCATGTGGGGTGTATATCCAAAGGAATTaGAATCCTATGCCCAAGAGATATTTCCACTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: IGLPCGVYIQRN*NPMPKRYFHSY Trigger: ATAGGAGTGGAAATATCTCTTGGGCATAGGATTTCAATTCCTTTGGATATACACCCCACATGGTAATCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 72 bp | AGACACTTCTCAGAAGAAGATCTACGAATGGACAAATaGGGAATTAAAAAGTGCTGGTCATCGCTAATCATC | + |
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Preference number: 6 (lower is better) Translates to: RHFSEEDLRMDK*GIKKCWSSLII Trigger: GATGATTAGCGATGACCAGCACTTTTTAATTCCTCATTTGTCCATTCGTAGATCTTCTTCTGAGAAGTGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS GCA 72 bp | CATGTGGGGTGTATATCCAAAGGAATTGAAATCCTATaGCCAAGAGATATTTCCACTCCTATGTTCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: HVGCISKGIEIL*PRDISTPMFIE Trigger: TTCAATGAACATAGGAGTGGAAATATCTCTTGGGCATAGGATTTCAATTCCTTTGGATATACACCCCACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CCA 72 bp | GGAGTTCCTCAGAAAACTAAAAATAGGATTACCATGTaGGGTGTATATCCAAAGGAATTGAAATCCTATGCC | + |
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Preference number: 6 (lower is better) Translates to: GVPQKTKNRITM*GVYPKELKSYA Trigger: GGCATAGGATTTCAATTCCTTTGGATATACACCCCACATGGTAATCCTATTTTTAGTTTTCTGAGGAACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS TCA 72 bp | ACTCACTCTCTCTTGATTCTGATGTACATAGAATCTTaGTTCAGTTTGTACATAGCTGGACCATATAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: THSLLILMYIES*FSLYIAGPYSS Trigger: ACTGCTATATGGTCCAGCTATGTACAAACTGAATCAAGATTCTATGTACATCAGAATCAAGAGAGAGTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653531.1 ENST00000658323.1 ENST00000664041.1 ENST00000664057.1 ENST00000670559.1 ENST00000671424.1 |
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| CDS CAA 90 bp | AATGCTGCCCTCCTCCTCTCTCTTTGGAGGATTAAAACTATTATTTaGTCAGATGAATCCTTGACTTTTCTCCTCAGAAATATATGTATT | + |
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Preference number: 6 (lower is better) Translates to: NAALLLSLWRIKTII*SDESLTFLLRNICI Trigger: AATACATATATTTCTGAGGAGAAAAGTCAAGGATTCATCTGACAAAATAATAGTTTTAATCCTCCAAAGAGAGAGGAGGAGGGCAGCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS GCA 72 bp | CTGCAAAAATGTGACAGTGGTGACTGTCTTATTATATaGTTGACAGGATTAATTGAGATCATGGTCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LQKCDSGDCLII*LTGLIEIMVKE Trigger: TTCTTTGACCATGATCTCAATTAATCCTGTCAAGCATATAATAAGACAGTCACCACTGTCACATTTTTGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS CCA 72 bp | ATTTTAGCAGAGAAACTGACTACTCAAAAATGTCACTaGACTGTCAAAGGCATGGATATGTTGACTTATCAA | + |
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Preference number: 6 (lower is better) Translates to: ILAEKLTTQKCH*TVKGMDMLTYQ Trigger: TTGATAAGTCAACATATCCATGCCTTTGACAGTCCAGTGACATTTTTGAGTAGTCAGTTTCTCTGCTAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS CAA 72 bp | CTCCTCCTCTCTCTTTGGAGGATTAAAACTATTATTTaGTCAGATGAATCCTTGACTTTTCTCCTCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LLLSLWRIKTII*SDESLTFLLRN Trigger: ATTTCTGAGGAGAAAAGTCAAGGATTCATCTGACAAAATAATAGTTTTAATCCTCCAAAGAGAGAGGAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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| CDS CAA 72 bp | CAAAAATGTGACAGTGGTGACTGTCTTATTATATGCTaGACAGGATTAATTGAGATCATGGTCAAAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QKCDSGDCLIIC*TGLIEIMVKER Trigger: CCTTTCTTTGACCATGATCTCAATTAATCCTGTCAAGCATATAATAAGACAGTCACCACTGTCACATTTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS TCA 72 bp | AAAAATGTCACTGGACTGTCAAAGGCATGGATATGTTaGCTTATCAAGGCATTGGAATTGACAATATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KNVTGLSKAWIC*LIKALELTILK Trigger: TTTCAATATTGTCAATTCCAATGCCTTGATAAGTCAACATATCCATGCCTTTGACAGTCCAGTGACATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670559.1 |
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| CDS CAA 72 bp | GGTATTATTAAGTTAAATTACCCTAAAAGTGTTGGATaGACAGAAAGTTTCAGTCAATGGTTTGGAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GIIKLNYPKSVG*TESFSQWFGKP Trigger: CGGCTTTCCAAACCATTGACTGAAACTTTCTGTCAATCCAACACTTTTAGGGTAATTTAACTTAATAATACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434868.1 |
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