Pregenerated sensors for LINC01415 (Homo sapiens)
Ensembl gene IDs: ENSG00000267325Ensembl transcript IDs: ENST00000587320.1, ENST00000588134.1, ENST00000656675.1, ENST00000657320.1, ENST00000657903.1, ENST00000662428.1, ENST00000663960.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGCGGCCGGGACCGCAGCCCCTGGGTGCGCAGTGCGCCTCTCGCTaGGCCCTCCTAGAGCGCGGGTCCCGTGCCTGTGCCCGGCGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRPGPQPLGAQCASR*ALLERGSRACARRD Trigger: GTCGCGCCGGGCACAGGCACGGGACCCGCGCTCTAGGAGGGCGCAGCGAGAGGCGCACTGCGCACCCAGGGGCTGCGGTCCCGGCCGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657320.1 ENST00000662428.1 |
||
| CDS GCA 90 bp | GAGTCAGCTTGTCACCGCACGGCGGCCGGGACCGCAGCCCCTGGGTaGGCAGTGCGCCTCTCGCTGCGCCCTCCTAGAGCGCGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESACHRTAAGTAAPG*AVRLSLRPPRARVP Trigger: CGGGACCCGCGCTCTAGGAGGGCGCAGCGAGAGGCGCACTGCGCACCCAGGGGCTGCGGTCCCGGCCGCCGTGCGGTGACAAGCTGACTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS GCA 90 bp | GTGCGCCTCTCGCTGCGCCCTCCTAGAGCGCGGGTCCCGTGCCTGTaGCCGGCGCGACGCGATCTCCCTGCTAGTCGGGCTCCGCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRLSLRPPRARVPCL*PARRDLPASRAPRA Trigger: AGCACGCGGAGCCCGACTAGCAGGGAGATCGCGTCGCGCCGGGCACAGGCACGGGACCCGCGCTCTAGGAGGGCGCAGCGAGAGGCGCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657320.1 ENST00000662428.1 |
||
| CDS GCA 90 bp | TGCGCAGTGCGCCTCTCGCTGCGCCCTCCTAGAGCGCGGGTCCCGTaGCTGTGCCCGGCGCGACGCGATCTCCCTGCTAGTCGGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CAVRLSLRPPRARVP*LCPARRDLPASRAP Trigger: CGGAGCCCGACTAGCAGGGAGATCGCGTCGCGCCGGGCACAGGCACGGGACCCGCGCTCTAGGAGGGCGCAGCGAGAGGCGCACTGCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657320.1 ENST00000662428.1 |
||
| CDS CCA 90 bp | AGCCTCCCATGCGACATCTCCGCCAGCACCCCGCGCGGACTTGGCTaGGCGGCGGCGGGGAGTCAGCTTGTCACCGCACGGCGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPCDISASTPRGLG*AAAGSQLVTARRPG Trigger: TCCCGGCCGCCGTGCGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCGGGGTGCTGGCGGAGATGTCGCATGGGAGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS CCA 90 bp | AAGAAGCCTCCCATGCGACATCTCCGCCAGCACCCCGCGCGGACTTaGCTGGGCGGCGGCGGGGAGTCAGCTTGTCACCGCACGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KKPPMRHLRQHPART*LGGGGESACHRTAA Trigger: GGCCGCCGTGCGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCGGGGTGCTGGCGGAGATGTCGCATGGGAGGCTTCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS GCA 90 bp | TTCGTTTCCCGCGGTCAGATGGTGCGGTCGGTGGGGCCCGAGGGATaGGCACAGCTGTGCCTGAGAGGTGCTGCTCTCCCGCCACCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FVSRGQMVRSVGPEG*AQLCLRGAALPPPK Trigger: CTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCCACCGACCGCACCATCTGACCGCGGGAAACGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GCGGTCGGTGGGGCCCGAGGGATGCGCACAGCTGTGCCTGAGAGGTaGTGCTCTCCCGCCACCGAAGTCGCTGGGAAATTCTGCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AVGGARGMRTAVPER*CSPATEVAGKFCCT Trigger: AGTGCAGCAGAATTTCCCAGCGACTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCCACCGACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GGTCAGATGGTGCGGTCGGTGGGGCCCGAGGGATGCGCACAGCTGTaGCTGAGAGGTGCTGCTCTCCCGCCACCGAAGTCGCTGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GQMVRSVGPEGCAQL*LRGAALPPPKSLGN Trigger: ATTTCCCAGCGACTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCCACCGACCGCACCATCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GTCGGTGGGGCCCGAGGGATGCGCACAGCTGTGCCTGAGAGGTGCTaGTCTCCCGCCACCGAAGTCGCTGGGAAATTCTGCTGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGGARGMRTAVPERC*SPATEVAGKFCCTE Trigger: CTCAGTGCAGCAGAATTTCCCAGCGACTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCCACCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GGGTGGGGGCGGGAGGGCTCAGCAAGGCACACCTTATTTCACACGTaGCTCTCCTTTGCATATTCATGTGTCCTCTATTTAAAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWGREGSARHTLFHT*LSFAYSCVLYLKAS Trigger: ACTGGCCTTTAAATAGAGGACACATGAATATGCAAAGGAGAGGCACGTGTGAAATAAGGTGTGCCTTGCTGAGCCCTCCCGCCCCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GGGCCCAGACAGTTGGTGCTTAAGCGTCTACAATGTAGAGTTTCCTaGATTTTCCTCGGGCCGCCATTTGTCTACTTGTCCCATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPRQLVLKRLQCRVS*IFLGPPFVYLSHPG Trigger: TCCTGGATGGGACAAGTAGACAAATGGCGGCCCGAGGAAAATGCAGGAAACTCTACATTGTAGACGCTTAAGCACCAACTGTCTGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | GTGGAAAAATCACGGTCCTCTAGGAGATTTATCCGGGAACGAACGTaGGTGGGGCAGTTCAAATTCCTGAGCTCAGATTTCGTTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VEKSRSSRRFIRERT*VGQFKFLSSDFVSR Trigger: GCGGGAAACGAAATCTGAGCTCAGGAATTTGAACTGCCCCACGCACGTTCGTTCCCGGATAAATCTCCTAGAGGACCGTGATTTTTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 90 bp | ATTTTAATGTCGGATGTTCTAATCTCAGGCGAGGTGGCTTGGATTTaGACCTCGTTGAAGAAGCCTCCCATGCGACATCTCCGCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILMSDVLISGEVAWI*TSLKKPPMRHLRQH Trigger: GTGCTGGCGGAGATGTCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGACATTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS TCA 90 bp | ACCCAAGACTCCCCTGTGCCAAATCCCTCCCATGACCCTCCACTGTaGTTCAAATTGGAGTGTTCTGGAAAATGCCGGTTCGAATTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQDSPVPNPSHDPPL*FKLECSGKCRFELQ Trigger: TTGCAATTCGAACCGGCATTTTCCAGAACACTCCAATTTGAATCACAGTGGAGGGTCATGGGAGGGATTTGGCACAGGGGAGTCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000656675.1 |
||
| CDS GCA 90 bp | ATCCCATTGATCAATGTGGAAAACCAAAGACCCAAGACTCCCCTGTaGCAAATCCCTCCCATGACCCTCCACTGTGATTCAAATTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IPLINVENQRPKTPL*QIPPMTLHCDSNWS Trigger: ACTCCAATTTGAATCACAGTGGAGGGTCATGGGAGGGATTTGGCACAGGGGAGTCTTGGGTCTTTGGTTTTCCACATTGATCAATGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000656675.1 |
||
| CDS GCA 90 bp | GGAGGGCTCAGCAAGGCACACCTTATTTCACACGTGCCTCTCCTTTaGATATTCATGTGTCCTCTATTTAAAGGCCAGTGTGTCATACTA | + |
|
Preference number: 5 (lower is better) Translates to: GGLSKAHLISHVPLL*IFMCPLFKGQCVIL Trigger: TAGTATGACACACTGGCCTTTAAATAGAGGACACATGAATATGCAAAGGAGAGGCACGTGTGAAATAAGGTGTGCCTTGCTGAGCCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS TCA 90 bp | GAAACAGGTTATTTCTTGAAAGCAGTAAATGGAGGGCATTATGTGTaGATCAAGTACCAGAAGCAGGGGGTCTTTGTCTCTCCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ETGYFLKAVNGGHYV*IKYQKQGVFVSPSP Trigger: GGGAGAGGGAGAGACAAAGACCCCCTGCTTCTGGTACTTGATTCACACATAATGCCCTCCATTTACTGCTTTCAAGAAATAACCTGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000656675.1 |
||
| CDS TCA 90 bp | TTCATAGCCAGATCTGTATCATTTGAAAGCTGTGCTTGCTCTCACTaGGTGGGATCAATACTTCGTAATAGTCTTTCCATGCCTTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIARSVSFESCACSH*VGSILRNSLSMPFK Trigger: TTTAAAAGGCATGGAAAGACTATTACGAAGTATTGATCCCACTCAGTGAGAGCAAGCACAGCTTTCAAATGATACAGATCTGGCTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS GCA 90 bp | CTTGCTCTCACTGAGTGGGATCAATACTTCGTAATAGTCTTTCCATaGCTTTTAAACTCAATCATACAGATAGTTTATCCGCTTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LALTEWDQYFVIVFP*LLNSIIQIVYPLSN Trigger: GTTGGAAAGCGGATAAACTATCTGTATGATTGAGTTTAAAAGGCATGGAAAGACTATTACGAAGTATTGATCCCACTCAGTGAGAGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS CAA 72 bp | CGCGCGGACTTGGCTGGGCGGCGGCGGGGAGTCAGCTaGTCACCGCACGGCGGCCGGGACCGCAGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RADLAGRRRGVS*SPHGGRDRSPW Trigger: CCAGGGGCTGCGGTCCCGGCCGCCGTGCGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS GCA 72 bp | GGACCGCAGCCCCTGGGTGCGCAGTGCGCCTCTCGCTaGGCCCTCCTAGAGCGCGGGTCCCGTGCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPQPLGAQCASR*ALLERGSRACA Trigger: GGCACAGGCACGGGACCCGCGCTCTAGGAGGGCGCAGCGAGAGGCGCACTGCGCACCCAGGGGCTGCGGTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657320.1 ENST00000662428.1 |
||
| CDS GCA 72 bp | TGTCACCGCACGGCGGCCGGGACCGCAGCCCCTGGGTaGGCAGTGCGCCTCTCGCTGCGCCCTCCTAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CHRTAAGTAAPG*AVRLSLRPPRA Trigger: CGCTCTAGGAGGGCGCAGCGAGAGGCGCACTGCGCACCCAGGGGCTGCGGTCCCGGCCGCCGTGCGGTGACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS GCA 72 bp | TCGCTGCGCCCTCCTAGAGCGCGGGTCCCGTGCCTGTaGCCGGCGCGACGCGATCTCCCTGCTAGTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRPPRARVPCL*PARRDLPASRA Trigger: AGCCCGACTAGCAGGGAGATCGCGTCGCGCCGGGCACAGGCACGGGACCCGCGCTCTAGGAGGGCGCAGCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657320.1 ENST00000662428.1 |
||
| CDS CCA 72 bp | TGCGACATCTCCGCCAGCACCCCGCGCGGACTTGGCTaGGCGGCGGCGGGGAGTCAGCTTGTCACCGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: CDISASTPRGLG*AAAGSQLVTAR Trigger: CCGTGCGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCGGGGTGCTGGCGGAGATGTCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS CAA 90 bp | GAAGAAGCCTCCCATGCGACATCTCCGCCAGCACCCCGCGCGGACTaGGCTGGGCGGCGGCGGGGAGTCAGCTTGTCACCGCACGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EEASHATSPPAPRAD*AGRRRGVSLSPHGG Trigger: GCCGCCGTGCGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCGGGGTGCTGGCGGAGATGTCGCATGGGAGGCTTCTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS CAA 72 bp | TCCCATGCGACATCTCCGCCAGCACCCCGCGCGGACTaGGCTGGGCGGCGGCGGGGAGTCAGCTTGTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: SHATSPPAPRAD*AGRRRGVSLSP Trigger: CGGTGACAAGCTGACTCCCCGCCGCCGCCCAGCCAAGTCCGCGCGGGGTGCTGGCGGAGATGTCGCATGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 |
||
| CDS GCA 72 bp | CGCGGTCAGATGGTGCGGTCGGTGGGGCCCGAGGGATaGGCACAGCTGTGCCTGAGAGGTGCTGCTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGQMVRSVGPEG*AQLCLRGAALP Trigger: CGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCCACCGACCGCACCATCTGACCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | GGGGCCCGAGGGATGCGCACAGCTGTGCCTGAGAGGTaGTGCTCTCCCGCCACCGAAGTCGCTGGGAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: GARGMRTAVPER*CSPATEVAGKF Trigger: GAATTTCCCAGCGACTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | GCCCGAGGGATGCGCACAGCTGTGCCTGAGAGGTGCTaGTCTCCCGCCACCGAAGTCGCTGGGAAATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARGMRTAVPERC*SPATEVAGKFC Trigger: GCAGAATTTCCCAGCGACTTCGGTGGCGGGAGAGCAGCACCTCTCAGGCACAGCTGTGCGCATCCCTCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS CAA 90 bp | TCGGATGTTCTAATCTCAGGCGAGGTGGCTTGGATTTGCACCTCGTaGAAGAAGCCTCCCATGCGACATCTCCGCCAGCACCCCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SDVLISGEVAWICTS*KKPPMRHLRQHPAR Trigger: CCGCGCGGGGTGCTGGCGGAGATGTCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS CAA 72 bp | CTAATCTCAGGCGAGGTGGCTTGGATTTGCACCTCGTaGAAGAAGCCTCCCATGCGACATCTCCGCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LISGEVAWICTS*KKPPMRHLRQH Trigger: GTGCTGGCGGAGATGTCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS GCA 72 bp | GTCTCCCGTTCCCTGCCCCGGGGCCCAGACAGTTGGTaGTTAAGCGTCTACAATGTAGAGTTTCCTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: VSRSLPRGPDSW*LSVYNVEFPAF Trigger: AAATGCAGGAAACTCTACATTGTAGACGCTTAAGCACCAACTGTCTGGGCCCCGGGGCAGGGAACGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS CCA 72 bp | AATGTCTCCCGTTCCCTGCCCCGGGGCCCAGACAGTTaGTGCTTAAGCGTCTACAATGTAGAGTTTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NVSRSLPRGPDS*CLSVYNVEFPA Trigger: TGCAGGAAACTCTACATTGTAGACGCTTAAGCACCAACTGTCTGGGCCCCGGGGCAGGGAACGGGAGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS CAA 72 bp | CTTTTCCCATTCTCTATTATCCCTCAGCGGCAGCTTTaGGTGTCTCTGGTACGAGGCAAGGTGTCGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFPFSIIPQRQL*VSLVRGKVSRG Trigger: CCCCCTCGACACCTTGCCTCGTACCAGAGACACCAAAAGCTGCCGCTGAGGGATAATAGAGAATGGGAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | TCGGATGTTCTAATCTCAGGCGAGGTGGCTTGGATTTaGACCTCGTTGAAGAAGCCTCCCATGCGACATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDVLISGEVAWI*TSLKKPPMRHL Trigger: GAGATGTCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS CAA 72 bp | GTCGGATGTTCTAATCTCAGGCGAGGTGGCTTGGATTaGCACCTCGTTGAAGAAGCCTCCCATGCGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: VGCSNLRRGGLD*HLVEEASHATS Trigger: AGATGTCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS TCA 72 bp | TCCCCTGTGCCAAATCCCTCCCATGACCCTCCACTGTaGTTCAAATTGGAGTGTTCTGGAAAATGCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPVPNPSHDPPL*FKLECSGKCRF Trigger: GAACCGGCATTTTCCAGAACACTCCAATTTGAATCACAGTGGAGGGTCATGGGAGGGATTTGGCACAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000656675.1 |
||
| CDS GCA 72 bp | TCACGGTCCTCTAGGAGATTTATCCGGGAACGAACGTaGGTGGGGCAGTTCAAATTCCTGAGCTCAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSRRFIRERT*VGQFKFLSSDF Trigger: GAAATCTGAGCTCAGGAATTTGAACTGCCCCACGCACGTTCGTTCCCGGATAAATCTCCTAGAGGACCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | ATCAATGTGGAAAACCAAAGACCCAAGACTCCCCTGTaGCAAATCCCTCCCATGACCCTCCACTGTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: INVENQRPKTPL*QIPPMTLHCDS Trigger: TGAATCACAGTGGAGGGTCATGGGAGGGATTTGGCACAGGGGAGTCTTGGGTCTTTGGTTTTCCACATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000656675.1 |
||
| CDS CCA 72 bp | TTAATGTCGGATGTTCTAATCTCAGGCGAGGTGGCTTaGATTTGCACCTCGTTGAAGAAGCCTCCCATGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LMSDVLISGEVA*ICTSLKKPPMR Trigger: TCGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGACATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS CAA 72 bp | TTTAATGTCGGATGTTCTAATCTCAGGCGAGGTGGCTaGGATTTGCACCTCGTTGAAGAAGCCTCCCATGCG | + |
|
Preference number: 6 (lower is better) Translates to: FNVGCSNLRRGG*DLHLVEEASHA Trigger: CGCATGGGAGGCTTCTTCAACGAGGTGCAAATCCAAGCCACCTCGCCTGAGATTAGAACATCCGACATTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657320.1 |
||
| CDS GCA 72 bp | CAGTTGGTGCTTAAGCGTCTACAATGTAGAGTTTCCTaGATTTTCCTCGGGCCGCCATTTGTCTACTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLVLKRLQCRVS*IFLGPPFVYLS Trigger: GGACAAGTAGACAAATGGCGGCCCGAGGAAAATGCAGGAAACTCTACATTGTAGACGCTTAAGCACCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | CGGGAGGGCTCAGCAAGGCACACCTTATTTCACACGTaGCTCTCCTTTGCATATTCATGTGTCCTCTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: REGSARHTLFHT*LSFAYSCVLYL Trigger: TAAATAGAGGACACATGAATATGCAAAGGAGAGGCACGTGTGAAATAAGGTGTGCCTTGCTGAGCCCTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS CAA 72 bp | AATGTAGAGTTTCCTGCATTTTCCTCGGGCCGCCATTaGTCTACTTGTCCCATCCAGGACATCTCCCTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: NVEFPAFSSGRH*STCPIQDISLN Trigger: ATTTAGGGAGATGTCCTGGATGGGACAAGTAGACAAATGGCGGCCCGAGGAAAATGCAGGAAACTCTACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000587320.1 ENST00000588134.1 ENST00000656675.1 ENST00000657320.1 ENST00000657903.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS GCA 72 bp | AGCAAGGCACACCTTATTTCACACGTGCCTCTCCTTTaGATATTCATGTGTCCTCTATTTAAAGGCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SKAHLISHVPLL*IFMCPLFKGQC Trigger: ACACTGGCCTTTAAATAGAGGACACATGAATATGCAAAGGAGAGGCACGTGTGAAATAAGGTGTGCCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 ENST00000663960.1 |
||
| CDS TCA 72 bp | GTCACCATTCAAATTCATAGCCAGATCTGTATCATTTaGAAGCTGTGCTTGCTCTCACTGAGTGGGATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VTIQIHSQICII*KLCLLSLSGIN Trigger: ATTGATCCCACTCAGTGAGAGCAAGCACAGCTTTCAAATGATACAGATCTGGCTATGAATTTGAATGGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS CCA 72 bp | CTGTATCATTTGAAAGCTGTGCTTGCTCTCACTGAGTaGGATCAATACTTCGTAATAGTCTTTCCATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LYHLKAVLALTE*DQYFVIVFPCL Trigger: AAGGCATGGAAAGACTATTACGAAGTATTGATCCCACTCAGTGAGAGCAAGCACAGCTTTCAAATGATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS CAA 72 bp | CTAGAGGCATTAGGAGAGAACAGCTCTCTTCATCTATaGCTGCTTGGACTGAAAACTGCTAAAATCAATACG | + |
|
Preference number: 6 (lower is better) Translates to: LEALGENSSLHL*LLGLKTAKINT Trigger: CGTATTGATTTTAGCAGTTTTCAGTCCAAGCAGCAATAGATGAAGAGAGCTGTTCTCTCCTAATGCCTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587320.1 |
||
| CDS TCA 72 bp | AGATCTGTATCATTTGAAAGCTGTGCTTGCTCTCACTaGGTGGGATCAATACTTCGTAATAGTCTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RSVSFESCACSH*VGSILRNSLSM Trigger: CATGGAAAGACTATTACGAAGTATTGATCCCACTCAGTGAGAGCAAGCACAGCTTTCAAATGATACAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS GCA 72 bp | ACTGAGTGGGATCAATACTTCGTAATAGTCTTTCCATaGCTTTTAAACTCAATCATACAGATAGTTTATCCG | + |
|
Preference number: 6 (lower is better) Translates to: TEWDQYFVIVFP*LLNSIIQIVYP Trigger: CGGATAAACTATCTGTATGATTGAGTTTAAAAGGCATGGAAAGACTATTACGAAGTATTGATCCCACTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587320.1 ENST00000656675.1 ENST00000657320.1 ENST00000662428.1 |
||
| CDS CAA 72 bp | TGCTTCAGCCTTAATTTCTTGCTGTTTCTGAAAGTGTaGTTGTTTGATCTCAAGATCAGGAAGACTTATGAT | + |
|
Preference number: 6 (lower is better) Translates to: CFSLNFLLFLKV*LFDLKIRKTYD Trigger: ATCATAAGTCTTCCTGATCTTGAGATCAAACAACAACACTTTCAGAAACAGCAAGAAATTAAGGCTGAAGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587320.1 ENST00000662428.1 |
||