Pregenerated sensors for LINC01414 (Homo sapiens)
Ensembl gene IDs: ENSG00000253554Ensembl transcript IDs: ENST00000520365.1, ENST00000521958.1, ENST00000523191.5, ENST00000524360.5, ENST00000648669.1, ENST00000665620.1, ENST00000668083.1, ENST00000668525.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATGGCCGGTGACCCAGTAAGGACTAAACCTTGCGCTGGTTTATTGTaGCAAGCTGAGAAAGGGGCTTTAGGCCCGGGACCCCAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: MAGDPVRTKPCAGLL*QAEKGALGPGPQAL Trigger: CAGTGCCTGGGGTCCCGGGCCTAAAGCCCCTTTCTCAGCTTGCCACAATAAACCAGCGCAAGGTTTAGTCCTTACTGGGTCACCGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS GCA 90 bp | TCATCCATCAGCAGGGTGCCCAGAGCAGAGTTGGACAGTCTTCCTTaGTCCATCTCCAGAGGGGAGGCCCAGTTGGGAAACAGGATTCTC | + |
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Preference number: 5 (lower is better) Translates to: SSISRVPRAELDSLP*SISRGEAQLGNRIL Trigger: GAGAATCCTGTTTCCCAACTGGGCCTCCCCTCTGGAGATGGAGCAAGGAAGACTGTCCAACTCTGCTCTGGGCACCCTGCTGATGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000521958.1 ENST00000523191.5 ENST00000665620.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS GCA 90 bp | AGTCCTCACATGACGACTGGCCTGACACCTCATCCATCAGCAGGGTaGCCAGAGCAGAGTTGGACAGTCTTCCTTGCTCCATCTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SPHMTTGLTPHPSAG*PEQSWTVFLAPSPE Trigger: CTCTGGAGATGGAGCAAGGAAGACTGTCCAACTCTGCTCTGGGCACCCTGCTGATGGATGAGGTGTCAGGCCAGTCGTCATGTGAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000521958.1 ENST00000523191.5 ENST00000665620.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS GCA 90 bp | GAAAGGCAAGATTGGCCTAGCCTCCCAGCCTACATCTTTCTCCTGTaGTGGATACTTCCGGCCCTCCAACATCGGACTCCAAGTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ERQDWPSLPAYIFLL*WILPALQHRTPSSS Trigger: TGAAGAACTTGGAGTCCGATGTTGGAGGGCCGGAAGTATCCAGCACAGGAGAAAGATGTAGGCTGGGAGGCTAGGCCAATCTTGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 90 bp | ATGGGATGGCTCTCCTTGCTCCTCAAACTTGCAGACAGCCTATTGTaGGACCTCTTGTTTCGCATCCTGTCTCCTCACTCTCTGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: MGWLSLLLKLADSLL*DLLFRILSPHSLHS Trigger: GGAGTGCAGAGAGTGAGGAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 90 bp | AGGCAAGATTGGCCTAGCCTCCCAGCCTACATCTTTCTCCTGTGCTaGATACTTCCGGCCCTCCAACATCGGACTCCAAGTTCTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RQDWPSLPAYIFLLC*ILPALQHRTPSSSV Trigger: AACTGAAGAACTTGGAGTCCGATGTTGGAGGGCCGGAAGTATCCAGCACAGGAGAAAGATGTAGGCTGGGAGGCTAGGCCAATCTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS GCA 90 bp | TGGACTCTCGACCTTGCTCCCCTCACGGTCCTCTCAAGTAAGATCTaGCTTTCTCCTGCTCCCCATATTGTAAAGGATTTGAAAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: WTLDLAPLTVLSSKI*LSPAPHIVKDLKGE Trigger: CTCACCTTTCAAATCCTTTACAATATGGGGAGCAGGAGAAAGGCAGATCTTACTTGAGAGGACCGTGAGGGGAGCAAGGTCGAGAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520365.1 |
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| CDS GCA 90 bp | TCTTCAGTTTTGAGACATGGGATGGCTCTCCTTGCTCCTCAAACTTaGAGACAGCCTATTGTGGGACCTCTTGTTTCGCATCCTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSVLRHGMALLAPQT*RQPIVGPLVSHPVS Trigger: GGAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAAACTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 90 bp | AGTATGCCTCCCTCACCTGTGCGTCATTTTCACATTCTTCCTCAATaGGAAATGATTGTGCAGGAAGAGCAGGGGGAGACTCCCACCATT | + |
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Preference number: 5 (lower is better) Translates to: SMPPSPVRHFHILPQ*EMIVQEEQGETPTI Trigger: AATGGTGGGAGTCTCCCCCTGCTCTTCCTGCACAATCATTTCCCATTGAGGAAGAATGTGAAAATGACGCACAGGTGAGGGAGGCATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000521958.1 ENST00000648669.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS CCA 90 bp | ACAGCCCTCCAGTCGCCCAGGCTCCCATTGTTTGCTGAGCAACAATaGAGATTTCGCAGGGAAAGTAAAGCTCTTTTCAGATTCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TALQSPRLPLFAEQQ*RFRRESKALFRFLS Trigger: AGAGAGGAATCTGAAAAGAGCTTTACTTTCCCTGCGAAATCTCCATTGTTGCTCAGCAAACAATGGGAGCCTGGGCGACTGGAGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CCA 90 bp | TTAATCACAAAGGTGTGTGCAGGGTACACGGAATTCCTCAACGTATaGTTGAGGAACCGAGGGCTAACAGTAGGTGGGCTGTTATTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LITKVCAGYTEFLNV*LRNRGLTVGGLLLP Trigger: GGGCAATAACAGCCCACCTACTGTTAGCCCTCGGTTCCTCAACCATACGTTGAGGAATTCCGTGTACCCTGCACACACCTTTGTGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS GCA 90 bp | TCGGACTCCAAGTTCTTCAGTTTTGAGACATGGGATGGCTCTCCTTaGTCCTCAAACTTGCAGACAGCCTATTGTGGGACCTCTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SDSKFFSFETWDGSP*SSNLQTAYCGTSCF Trigger: GAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAAACTGAAGAACTTGGAGTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS GCA 90 bp | CATATTGGCTCCAGGAAACGAAAGGTAAGAAGCGGTCTTATAGTATaGCTCCCTCACCTGTGCGTCATTTTCACATTCTTCCTCAATGGG | + |
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Preference number: 5 (lower is better) Translates to: HIGSRKRKVRSGLIV*LPHLCVIFTFFLNG Trigger: CCCATTGAGGAAGAATGTGAAAATGACGCACAGGTGAGGGAGGCATACTATAAGACCGCTTCTTACCTTTCGTTTCCTGGAGCCAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000521958.1 ENST00000648669.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS CCA 90 bp | ATCATGGATCACACATCACATGACAGTAATTTTTCTTTTTGTATCTaGCTAGGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: IMDHTSHDSNFSFCI*LGGSYAHGVSLIAS Trigger: GCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCTAGCCAGATACAAAAAGAAAAATTACTGTCATGTGATGTGTGATCCATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 90 bp | AGAAGTTCTAACATAGGCGAAGGTATGAAGGTGGAGCACAGCAACTaGGTCTTACAAGGCTTTATGATGTCATCTCTCAGAGCCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RSSNIGEGMKVEHSN*VLQGFMMSSLRASV Trigger: AACTGAGGCTCTGAGAGATGACATCATAAAGCCTTGTAAGACCCAGTTGCTGTGCTCCACCTTCATACCTTCGCCTATGTTAGAACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521958.1 |
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| CDS GCA 90 bp | TTGTGTCAAATAAACTTTGGCCACTGGAGGAAAGTACCCCATGGTTaGTCTGGCTTTAGAAAGATCTGTCCAGGGCTTCTCAATCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LCQINFGHWRKVPHG*SGFRKICPGLLNLL Trigger: AAGAAGATTGAGAAGCCCTGGACAGATCTTTCTAAAGCCAGAGCAACCATGGGGTACTTTCCTCCAGTGGCCAAAGTTTATTTGACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665620.1 ENST00000668083.1 |
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| CDS TCA 90 bp | AGGGCTAACAGTAGGTGGGCTGTTATTGCCCGTAGTCTTGAGGGATaGCAGATGGGAGAAATTACTGAAATACAGAATAGTTACATAGAA | + |
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Preference number: 5 (lower is better) Translates to: RANSRWAVIARSLEG*QMGEITEIQNSYIE Trigger: TTCTATGTAACTATTCTGTATTTCAGTAATTTCTCCCATCTGTCATCCCTCAAGACTACGGGCAATAACAGCCCACCTACTGTTAGCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS CCA 90 bp | GCTAAAACCTCATCCTCTAGGACAAATCATCCCATGGCTAATCCATaGTTAATGATCAATGATCAATCATGGTTATTGAGCAATGATCAC | + |
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Preference number: 5 (lower is better) Translates to: AKTSSSRTNHPMANP*LMINDQSWLLSNDH Trigger: GTGATCATTGCTCAATAACCATGATTGATCATTGATCATTAACCATGGATTAGCCATGGGATGATTTGTCCTAGAGGATGAGGTTTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648669.1 ENST00000668525.1 |
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| CDS CCA 90 bp | AATCATCCCATGGCTAATCCATGGTTAATGATCAATGATCAATCATaGTTATTGAGCAATGATCACTTCTCCCAGATTGAAATACACTTT | + |
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Preference number: 5 (lower is better) Translates to: NHPMANPWLMINDQS*LLSNDHFSQIEIHF Trigger: AAAGTGTATTTCAATCTGGGAGAAGTGATCATTGCTCAATAACCATGATTGATCATTGATCATTAACCATGGATTAGCCATGGGATGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648669.1 ENST00000668525.1 |
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| CDS CAA 90 bp | AGGATGGCCGGTGACCCAGTAAGGACTAAACCTTGCGCTGGTTTATaGTGGCAAGCTGAGAAAGGGGCTTTAGGCCCGGGACCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RMAGDPVRTKPCAGL*WQAEKGALGPGPQA Trigger: TGCCTGGGGTCCCGGGCCTAAAGCCCCTTTCTCAGCTTGCCACAATAAACCAGCGCAAGGTTTAGTCCTTACTGGGTCACCGGCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CCA 72 bp | ACACCTCATCCATCAGCAGGGTGCCCAGAGCAGAGTTaGACAGTCTTCCTTGCTCCATCTCCAGAGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TPHPSAGCPEQS*TVFLAPSPEGR Trigger: CCTCCCCTCTGGAGATGGAGCAAGGAAGACTGTCCAACTCTGCTCTGGGCACCCTGCTGATGGATGAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000521958.1 ENST00000523191.5 ENST00000665620.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS CAA 72 bp | GACACCTCATCCATCAGCAGGGTGCCCAGAGCAGAGTaGGACAGTCTTCCTTGCTCCATCTCCAGAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DTSSISRVPRAE*DSLPCSISRGE Trigger: CTCCCCTCTGGAGATGGAGCAAGGAAGACTGTCCAACTCTGCTCTGGGCACCCTGCTGATGGATGAGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000521958.1 ENST00000523191.5 ENST00000665620.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS TCA 72 bp | CCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PNRNSSGLQLPA*ATQKTGDFCIS Trigger: GGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520365.1 |
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| CDS GCA 72 bp | ATGACGACTGGCCTGACACCTCATCCATCAGCAGGGTaGCCAGAGCAGAGTTGGACAGTCTTCCTTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: MTTGLTPHPSAG*PEQSWTVFLAP Trigger: TGGAGCAAGGAAGACTGTCCAACTCTGCTCTGGGCACCCTGCTGATGGATGAGGTGTCAGGCCAGTCGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000521958.1 ENST00000523191.5 ENST00000665620.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS GCA 72 bp | GATTGGCCTAGCCTCCCAGCCTACATCTTTCTCCTGTaGTGGATACTTCCGGCCCTCCAACATCGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: DWPSLPAYIFLL*WILPALQHRTP Trigger: TGGAGTCCGATGTTGGAGGGCCGGAAGTATCCAGCACAGGAGAAAGATGTAGGCTGGGAGGCTAGGCCAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 72 bp | TGGCCTAGCCTCCCAGCCTACATCTTTCTCCTGTGCTaGATACTTCCGGCCCTCCAACATCGGACTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: WPSLPAYIFLLC*ILPALQHRTPS Trigger: ACTTGGAGTCCGATGTTGGAGGGCCGGAAGTATCCAGCACAGGAGAAAGATGTAGGCTGGGAGGCTAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 72 bp | GACCCAGTAAGGACTAAACCTTGCGCTGGTTTATTGTaGCAAGCTGAGAAAGGGGCTTTAGGCCCGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: DPVRTKPCAGLL*QAEKGALGPGP Trigger: GGGTCCCGGGCCTAAAGCCCCTTTCTCAGCTTGCCACAATAAACCAGCGCAAGGTTTAGTCCTTACTGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CCA 72 bp | AAGGTGTGTGCAGGGTACACGGAATTCCTCAACGTATaGTTGAGGAACCGAGGGCTAACAGTAGGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KVCAGYTEFLNV*LRNRGLTVGGL Trigger: CAGCCCACCTACTGTTAGCCCTCGGTTCCTCAACCATACGTTGAGGAATTCCGTGTACCCTGCACACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS CAA 72 bp | TTCGCACAGCCCTCCAGTCGCCCAGGCTCCCATTGTTaGCTGAGCAACAATGGAGATTTCGCAGGGAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: FAQPSSRPGSHC*LSNNGDFAGKV Trigger: TACTTTCCCTGCGAAATCTCCATTGTTGCTCAGCAAACAATGGGAGCCTGGGCGACTGGAGGGCTGTGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 72 bp | TTCATTCGCACAGCCCTCCAGTCGCCCAGGCTCCCATaGTTTGCTGAGCAACAATGGAGATTTCGCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: FIRTALQSPRLP*FAEQQWRFRRE Trigger: TTCCCTGCGAAATCTCCATTGTTGCTCAGCAAACAATGGGAGCCTGGGCGACTGGAGGGCTGTGCGAATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 72 bp | GGTGACCCAGTAAGGACTAAACCTTGCGCTGGTTTATaGTGGCAAGCTGAGAAAGGGGCTTTAGGCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GDPVRTKPCAGL*WQAEKGALGPG Trigger: TCCCGGGCCTAAAGCCCCTTTCTCAGCTTGCCACAATAAACCAGCGCAAGGTTTAGTCCTTACTGGGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 90 bp | GACATGGGATGGCTCTCCTTGCTCCTCAAACTTGCAGACAGCCTATaGTGGGACCTCTTGTTTCGCATCCTGTCTCCTCACTCTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: DMGWLSLLLKLADSL*WDLLFRILSPHSLH Trigger: GTGCAGAGAGTGAGGAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CAA 72 bp | TGGCTCTCCTTGCTCCTCAAACTTGCAGACAGCCTATaGTGGGACCTCTTGTTTCGCATCCTGTCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: WLSLLLKLADSL*WDLLFRILSPH Trigger: GTGAGGAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CAA 72 bp | GTGTGTGCAGGGTACACGGAATTCCTCAACGTATGGTaGAGGAACCGAGGGCTAACAGTAGGTGGGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VCAGYTEFLNVW*RNRGLTVGGLL Trigger: TAACAGCCCACCTACTGTTAGCCCTCGGTTCCTCAACCATACGTTGAGGAATTCCGTGTACCCTGCACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS CAA 90 bp | GATCGCCTATTCATTCGCACAGCCCTCCAGTCGCCCAGGCTCCCATaGTTTGCTGAGCAACAATGGAGATTTCGCAGGGAAAGTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: DRLFIRTALQSPRLP*FAEQQWRFRRESKA Trigger: AGCTTTACTTTCCCTGCGAAATCTCCATTGTTGCTCAGCAAACAATGGGAGCCTGGGCGACTGGAGGGCTGTGCGAATGAATAGGCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 90 bp | GCCTATTCATTCGCACAGCCCTCCAGTCGCCCAGGCTCCCATTGTTaGCTGAGCAACAATGGAGATTTCGCAGGGAAAGTAAAGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: AYSFAQPSSRPGSHC*LSNNGDFAGKVKLF Trigger: AAAGAGCTTTACTTTCCCTGCGAAATCTCCATTGTTGCTCAGCAAACAATGGGAGCCTGGGCGACTGGAGGGCTGTGCGAATGAATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 90 bp | ATCACAAAGGTGTGTGCAGGGTACACGGAATTCCTCAACGTATGGTaGAGGAACCGAGGGCTAACAGTAGGTGGGCTGTTATTGCCCGTA | + |
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Preference number: 6 (lower is better) Translates to: ITKVCAGYTEFLNVW*RNRGLTVGGLLLPV Trigger: TACGGGCAATAACAGCCCACCTACTGTTAGCCCTCGGTTCCTCAACCATACGTTGAGGAATTCCGTGTACCCTGCACACACCTTTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS TCA 72 bp | CGGCCCTCCAACATCGGACTCCAAGTTCTTCAGTTTTaGGACATGGGATGGCTCTCCTTGCTCCTCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: RPSNIGLQVLQF*DMGWLSLLLKL Trigger: AAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAAACTGAAGAACTTGGAGTCCGATGTTGGAGGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 72 bp | CTCTCCTTGCTCCTCAAACTTGCAGACAGCCTATTGTaGGACCTCTTGTTTCGCATCCTGTCTCCTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: LSLLLKLADSLL*DLLFRILSPHS Trigger: AGAGTGAGGAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CAA 72 bp | TTGAGGAACCGAGGGCTAACAGTAGGTGGGCTGTTATaGCCCGTAGTCTTGAGGGATGACAGATGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LRNRGLTVGGLL*PVVLRDDRWEK Trigger: TTTCTCCCATCTGTCATCCCTCAAGACTACGGGCAATAACAGCCCACCTACTGTTAGCCCTCGGTTCCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS TCA 72 bp | GATTGTGCAGGAAGAGCAGGGGGAGACTCCCACCATTaGACTGGCTGGAAGGCTTTGCTTTTCAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: DCAGRAGGDSHH*TGWKALLFNVD Trigger: ATCAACATTGAAAAGCAAAGCCTTCCAGCCAGTTCAATGGTGGGAGTCTCCCCCTGCTCTTCCTGCACAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000521958.1 ENST00000648669.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS TCA 72 bp | TGGCTGAACCTAACTATTAGCCTGTGCAGAGCCAGTTaGTGCAGTCCACGAAATTCAGCCTTCACAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WLNLTISLCRAS*CSPRNSAFTGR Trigger: TCTGCCTGTGAAGGCTGAATTTCGTGGACTGCATCAACTGGCTCTGCACAGGCTAATAGTTAGGTTCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS GCA 72 bp | GACCTTGCTCCCCTCACGGTCCTCTCAAGTAAGATCTaGCTTTCTCCTGCTCCCCATATTGTAAAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: DLAPLTVLSSKI*LSPAPHIVKDL Trigger: CAAATCCTTTACAATATGGGGAGCAGGAGAAAGGCAGATCTTACTTGAGAGGACCGTGAGGGGAGCAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520365.1 |
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| CDS GCA 72 bp | TTGAGACATGGGATGGCTCTCCTTGCTCCTCAAACTTaGAGACAGCCTATTGTGGGACCTCTTGTTTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: LRHGMALLAPQT*RQPIVGPLVSH Trigger: ATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CAA 72 bp | TTTGAGACATGGGATGGCTCTCCTTGCTCCTCAAACTaGCAGACAGCCTATTGTGGGACCTCTTGTTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: FETWDGSPCSSN*QTAYCGTSCFA Trigger: TGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CAA 90 bp | TTCTTCAGTTTTGAGACATGGGATGGCTCTCCTTGCTCCTCAAACTaGCAGACAGCCTATTGTGGGACCTCTTGTTTCGCATCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FFSFETWDGSPCSSN*QTAYCGTSCFASCL Trigger: GAGACAGGATGCGAAACAAGAGGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAAACTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS GCA 72 bp | AAGTTCTTCAGTTTTGAGACATGGGATGGCTCTCCTTaGTCCTCAAACTTGCAGACAGCCTATTGTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: KFFSFETWDGSP*SSNLQTAYCGT Trigger: GGTCCCACAATAGGCTGTCTGCAAGTTTGAGGAGCAAGGAGAGCCATCCCATGTCTCAAAACTGAAGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS GCA 72 bp | ATAAACTTTGGCCACTGGAGGAAAGTACCCCATGGTTaGTCTGGCTTTAGAAAGATCTGTCCAGGGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: INFGHWRKVPHG*SGFRKICPGLL Trigger: GAGAAGCCCTGGACAGATCTTTCTAAAGCCAGAGCAACCATGGGGTACTTTCCTCCAGTGGCCAAAGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665620.1 ENST00000668083.1 |
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| CDS CCA 72 bp | TGTATCAAATGTCCTTGTTCTAGCTCTCCTAGTTTTTaGGGTTCCATGTGGACTCTCGACCTTGCTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: CIKCPCSSSPSF*GSMWTLDLAPL Trigger: GAGGGGAGCAAGGTCGAGAGTCCACATGGAACCCCAAAAACTAGGAGAGCTAGAACAAGGACATTTGATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520365.1 |
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| CDS CAA 90 bp | AACGTATGGTTGAGGAACCGAGGGCTAACAGTAGGTGGGCTGTTATaGCCCGTAGTCTTGAGGGATGACAGATGGGAGAAATTACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NVWLRNRGLTVGGLL*PVVLRDDRWEKLLK Trigger: TTTCAGTAATTTCTCCCATCTGTCATCCCTCAAGACTACGGGCAATAACAGCCCACCTACTGTTAGCCCTCGGTTCCTCAACCATACGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS TCA 72 bp | CAGAATAGTTACATAGAAAAGGAATCCGGAGAGAAGTaGCTTTCCGTGAAGGGACACGGTCAGCCTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: QNSYIEKESGEK*LSVKGHGQPEM Trigger: CATCTCAGGCTGACCGTGTCCCTTCACGGAAAGTCACTTCTCTCCGGATTCCTTTTCTATGTAACTATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS CAA 72 bp | GGGCTAACAGTAGGTGGGCTGTTATTGCCCGTAGTCTaGAGGGATGACAGATGGGAGAAATTACTGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: GLTVGGLLLPVV*RDDRWEKLLKY Trigger: GTATTTCAGTAATTTCTCCCATCTGTCATCCCTCAAGACTACGGGCAATAACAGCCCACCTACTGTTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS GCA 72 bp | TCCAGGAAACGAAAGGTAAGAAGCGGTCTTATAGTATaGCTCCCTCACCTGTGCGTCATTTTCACATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRKRKVRSGLIV*LPHLCVIFTFF Trigger: GAAGAATGTGAAAATGACGCACAGGTGAGGGAGGCATACTATAAGACCGCTTCTTACCTTTCGTTTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000521958.1 ENST00000648669.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS CCA 72 bp | AACATAGGCGAAGGTATGAAGGTGGAGCACAGCAACTaGGTCTTACAAGGCTTTATGATGTCATCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: NIGEGMKVEHSN*VLQGFMMSSLR Trigger: TCTGAGAGATGACATCATAAAGCCTTGTAAGACCCAGTTGCTGTGCTCCACCTTCATACCTTCGCCTATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521958.1 |
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| CDS CCA 72 bp | GTATCTCTACCAGTTTTCCTTAATCCAAGGGACCAGTaGAGCACAGGCACTGGAAATCCAGTATCTGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSLPVFLNPRDQ*STGTGNPVSVK Trigger: CTTTACAGATACTGGATTTCCAGTGCCTGTGCTCCACTGGTCCCTTGGATTAAGGAAAACTGGTAGAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS TCA 72 bp | AGTAGGTGGGCTGTTATTGCCCGTAGTCTTGAGGGATaGCAGATGGGAGAAATTACTGAAATACAGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: SRWAVIARSLEG*QMGEITEIQNS Trigger: ACTATTCTGTATTTCAGTAATTTCTCCCATCTGTCATCCCTCAAGACTACGGGCAATAACAGCCCACCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668525.1 |
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| CDS GCA 72 bp | GGTAGCATGGGAAATGATAGTCAGAATTTTTCCTGTTaGCTCCAGCCAAAGGACTTTGTATTAGTCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: GSMGNDSQNFSC*LQPKDFVLVHS Trigger: AGAATGGACTAATACAAAGTCCTTTGGCTGGAGGCAACAGGAAAAATTCTGACTATCATTTCCCATGCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520365.1 |
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| CDS CAA 72 bp | GTGATGCCACATTCATTAAACTCCTTGAGGATGGTCTaGGAACAAAACTATGACGGTATCATGGATCACACA | + |
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Preference number: 6 (lower is better) Translates to: VMPHSLNSLRMV*EQNYDGIMDHT Trigger: TGTGTGATCCATGATACCGTCATAGTTTTGTTCCAAGACCATCCTCAAGGAGTTTAATGAATGTGGCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000524360.5 ENST00000665620.1 ENST00000668525.1 |
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| CDS CAA 72 bp | GAAAGTAAAGCTCTTTTCAGATTCCTCTCTGATGTTTaGCATTTAGGGAAACACCGACCTCCACTTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ESKALFRFLSDV*HLGKHRPPLFP Trigger: GGGAAAAAGTGGAGGTCGGTGTTTCCCTAAATGCAAAACATCAGAGAGGAATCTGAAAAGAGCTTTACTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665620.1 |
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| CDS CAA 90 bp | ATTTTTCTTGTGATGCCACATTCATTAAACTCCTTGAGGATGGTCTaGGAACAAAACTATGACGGTATCATGGATCACACATCACATGAC | + |
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Preference number: 6 (lower is better) Translates to: IFLVMPHSLNSLRMV*EQNYDGIMDHTSHD Trigger: GTCATGTGATGTGTGATCCATGATACCGTCATAGTTTTGTTCCAAGACCATCCTCAAGGAGTTTAATGAATGTGGCATCACAAGAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524360.5 ENST00000665620.1 ENST00000668525.1 |
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| CDS CAA 90 bp | TATAACTGCGCTCTGTTCCAGAGGGAGGCACCATATTTTTCAATGTaGATGCATATTTTTCTTGTGATGCCACATTCATTAAACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: YNCALFQREAPYFSM*MHIFLVMPHSLNSL Trigger: CAAGGAGTTTAATGAATGTGGCATCACAAGAAAAATATGCATCAACATTGAAAAATATGGTGCCTCCCTCTGGAACAGAGCGCAGTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000524360.5 |
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| CDS CCA 72 bp | TCATCCTCTAGGACAAATCATCCCATGGCTAATCCATaGTTAATGATCAATGATCAATCATGGTTATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSRTNHPMANP*LMINDQSWLLS Trigger: GCTCAATAACCATGATTGATCATTGATCATTAACCATGGATTAGCCATGGGATGATTTGTCCTAGAGGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648669.1 ENST00000668525.1 |
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| CDS CAA 90 bp | ATGTTGATGCATATTTTTCTTGTGATGCCACATTCATTAAACTCCTaGAGGATGGTCTTGGAACAAAACTATGACGGTATCATGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: MLMHIFLVMPHSLNS*RMVLEQNYDGIMDH Trigger: GTGATCCATGATACCGTCATAGTTTTGTTCCAAGACCATCCTCAAGGAGTTTAATGAATGTGGCATCACAAGAAAAATATGCATCAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524360.5 ENST00000665620.1 ENST00000668525.1 |
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| CDS CAA 90 bp | CCCATGGCTAATCCATGGTTAATGATCAATGATCAATCATGGTTATaGAGCAATGATCACTTCTCCCAGATTGAAATACACTTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PMANPWLMINDQSWL*SNDHFSQIEIHFCQ Trigger: CTGACAAAAGTGTATTTCAATCTGGGAGAAGTGATCATTGCTCAATAACCATGATTGATCATTGATCATTAACCATGGATTAGCCATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000648669.1 ENST00000668525.1 |
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| CDS TCA 72 bp | TTTACATGTAGAGAGTTTGGGATTTGCTTGCACGTTTaGTTTTTGCCTGTGACTTTTGTAAGTGCTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FTCREFGICLHV*FLPVTFVSAKE Trigger: TTCCTTAGCACTTACAAAAGTCACAGGCAAAAATCAAACGTGCAAGCAAATCCCAAACTCTCTACATGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000648669.1 ENST00000668083.1 ENST00000668525.1 |
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| CDS CAA 72 bp | CATATTTTTCTTGTGATGCCACATTCATTAAACTCCTaGAGGATGGTCTTGGAACAAAACTATGACGGTATC | + |
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Preference number: 6 (lower is better) Translates to: HIFLVMPHSLNS*RMVLEQNYDGI Trigger: GATACCGTCATAGTTTTGTTCCAAGACCATCCTCAAGGAGTTTAATGAATGTGGCATCACAAGAAAAATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000524360.5 ENST00000665620.1 ENST00000668525.1 |
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| CDS CAA 72 bp | AATCCATGGTTAATGATCAATGATCAATCATGGTTATaGAGCAATGATCACTTCTCCCAGATTGAAATACAC | + |
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Preference number: 6 (lower is better) Translates to: NPWLMINDQSWL*SNDHFSQIEIH Trigger: GTGTATTTCAATCTGGGAGAAGTGATCATTGCTCAATAACCATGATTGATCATTGATCATTAACCATGGATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648669.1 ENST00000668525.1 |
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