Pregenerated sensors for LINC01412 (Homo sapiens)

Ensembl gene IDs: ENSG00000232606

Ensembl transcript IDs: ENST00000413525.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTGGCCGCCCTGCTGGGGCCAGGTGACGTGCGAGATTCCACAGCCTaGGGGTCTCGCAGCAGGGATGTTAGGGACGGTCTGAGCTTCTCT	+
Preference number: 5 (lower is better) Translates to: LAALLGPGDVRDSTA*GSRSRDVRDGLSFS Trigger: AGAGAAGCTCAGACCGTCCCTAACATCCCTGCTGCGAGACCCGCAGGCTGTGGAATCTCGCACGTCACCTGGCCCCAGCAGGGCGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS TCA 90 bp	AGCTTTCTGTTTAGCATCAATAAATTAAGATGCTCATTTGGGTCCTaGAGTTTGCTGGTTCCTGTCAGTGGAGACGTTGGCAAAAGCCCT	+
Preference number: 5 (lower is better) Translates to: SFLFSINKLRCSFGS*SLLVPVSGDVGKSP Trigger: AGGGCTTTTGCCAACGTCTCCACTGACAGGAACCAGCAAACTTCAGGACCCAAATGAGCATCTTAATTTATTGATGCTAAACAGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS TCA 72 bp	ATCAACCCCTCAGCTGGCCGCCCTGCTGGGGCCAGGTaGCGTGCGAGATTCCACAGCCTGCGGGTCTCGCAG	+
Preference number: 6 (lower is better) Translates to: INPSAGRPAGAR*RARFHSLRVSQ Trigger: CTGCGAGACCCGCAGGCTGTGGAATCTCGCACGTCACCTGGCCCCAGCAGGGCGGCCAGCTGAGGGGTTGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS CAA 72 bp	GGTCCTGAAGTTTGCTGGTTCCTGTCAGTGGAGACGTaGGCAAAAGCCCTGAAGCCGAGATTCAGCCTTTAC	+
Preference number: 6 (lower is better) Translates to: GPEVCWFLSVET*AKALKPRFSLY Trigger: GTAAAGGCTGAATCTCGGCTTCAGGGCTTTTGCCAACGTCTCCACTGACAGGAACCAGCAAACTTCAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS TCA 72 bp	TTTAGCATCAATAAATTAAGATGCTCATTTGGGTCCTaGAGTTTGCTGGTTCCTGTCAGTGGAGACGTTGGC	+
Preference number: 6 (lower is better) Translates to: FSINKLRCSFGS*SLLVPVSGDVG Trigger: GCCAACGTCTCCACTGACAGGAACCAGCAAACTTCAGGACCCAAATGAGCATCTTAATTTATTGATGCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS CAA 72 bp	GTTTTGCATGCCTTCTTTATTCCTTTGGCCCACCATTaGCCAAATACCACTCTTAGGTGTTGGAAACTCTTG	+
Preference number: 6 (lower is better) Translates to: VLHAFFIPLAHH*PNTTLRCWKLL Trigger: CAAGAGTTTCCAACACCTAAGAGTGGTATTTGGCAAATGGTGGGCCAAAGGAATAAAGAAGGCATGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS CAA 90 bp	CTGTCAAGAGTTTTGCATGCCTTCTTTATTCCTTTGGCCCACCATTaGCCAAATACCACTCTTAGGTGTTGGAAACTCTTGAATTCTCTG	+
Preference number: 6 (lower is better) Translates to: LSRVLHAFFIPLAHH*PNTTLRCWKLLNSL Trigger: CAGAGAATTCAAGAGTTTCCAACACCTAAGAGTGGTATTTGGCAAATGGTGGGCCAAAGGAATAAAGAAGGCATGCAAAACTCTTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS CAA 90 bp	TCTGAATGTCTTCTGTCAAGAGTTTTGCATGCCTTCTTTATTCCTTaGGCCCACCATTTGCCAAATACCACTCTTAGGTGTTGGAAACTC	+
Preference number: 6 (lower is better) Translates to: SECLLSRVLHAFFIP*AHHLPNTTLRCWKL Trigger: GAGTTTCCAACACCTAAGAGTGGTATTTGGCAAATGGTGGGCCAAAGGAATAAAGAAGGCATGCAAAACTCTTGACAGAAGACATTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS TCA 72 bp	AGAGCTTCACAGAAGGGTCTATTACAGATTGAGGAATaGTCCATTTCACATCTGAAGCTCCAAAGAGCTACT	+
Preference number: 6 (lower is better) Translates to: RASQKGLLQIEE*SISHLKLQRAT Trigger: AGTAGCTCTTTGGAGCTTCAGATGTGAAATGGATCATTCCTCAATCTGTAATAGACCCTTCTGTGAAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413525.2
CDS TCA 72 bp	ATCCATTTCACATCTGAAGCTCCAAAGAGCTACTTGTaGGGAATCTTTGAGTGCATTTATCTCACATGTGAA	+
Preference number: 6 (lower is better) Translates to: IHFTSEAPKSYL*GIFECIYLTCE Trigger: TTCACATGTGAGATAAATGCACTCAAAGATTCCTCACAAGTAGCTCTTTGGAGCTTCAGATGTGAAATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413525.2

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