Pregenerated sensors for LINC01411 (Homo sapiens)
Ensembl gene IDs: ENSG00000249306Ensembl transcript IDs: ENST00000504512.5, ENST00000506862.1, ENST00000507361.5, ENST00000510234.5, ENST00000511707.5, ENST00000515513.5, ENST00000664184.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCACACTGGCCACGTTTCAGGCTGGGCGCTACCATATTGGGCAGTaGAATTCTGAGGGGCCTTGGGGAGCAGCATGGTGTGGCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: FTLATFQAGRYHIGQ*NSEGPWGAAWCGHR Trigger: TCTGTGGCCACACCATGCTGCTCCCCAAGGCCCCTCAGAATTTCACTGCCCAATATGGTAGCGCCCAGCCTGAAACGTGGCCAGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000510234.5 ENST00000664184.1 |
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| CDS TCA 90 bp | AGAGGCGGGGAGAGGAGGGACTGTCACTTCTCAGTGGGCGGGATCTaGGAAAGGGTCAGCCGAACAAACGTTTGTTCTCATCCGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RGGERRDCHFSVGGI*ERVSRTNVCSHPQW Trigger: CCACTGCGGATGAGAACAAACGTTTGTTCGGCTGACCCTTTCTCAGATCCCGCCCACTGAGAAGTGACAGTCCCTCCTCTCCCCGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS CCA 90 bp | TTTGATACCACATCTGTCAACAGGACCATGGAGGATTTTCCTTCCTaGGGCCGCGCCCTGGTGGCCCAGCTTGCCTTCTTCCTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FDTTSVNRTMEDFPS*GRALVAQLAFFLVL Trigger: CAGCACCAGGAAGAAGGCAAGCTGGGCCACCAGGGCGCGGCCCCAGGAAGGAAAATCCTCCATGGTCCTGTTGACAGATGTGGTATCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000511707.5 |
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| CDS CCA 90 bp | ATATTTATTCCTTGCTCAAGCTCCATGCGTCCATCACAGGTGGGCTaGGGAGCTCTGCTCAGGGTAATCAGTCGGGCACCCAGGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: IFIPCSSSMRPSQVG*GALLRVISRAPRLM Trigger: CATCAGCCTGGGTGCCCGACTGATTACCCTGAGCAGAGCTCCCCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000506862.1 ENST00000507361.5 ENST00000510234.5 ENST00000511707.5 ENST00000515513.5 |
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| CDS CCA 90 bp | TCATCCTTCTATCCCCACTGCACAGCAGCCCAAGTAATTGACGGTTaGCCACAAACCACCTCCAGGAAACTCCAGCCTCCTGGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSFYPHCTAAQVIDG*PQTTSRKLQPPGAF Trigger: GAAGGCACCAGGAGGCTGGAGTTTCCTGGAGGTGGTTTGTGGCCAACCGTCAATTACTTGGGCTGCTGTGCAGTGGGGATAGAAGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS GCA 90 bp | CTCATCCGCAGTGGGGTTCTCAGGAAGCAACGAATATTTATTCCTTaGTCAAGCTCCATGCGTCCATCACAGGTGGGCTGGGGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LIRSGVLRKQRIFIP*SSSMRPSQVGWGAL Trigger: CAGAGCTCCCCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTTCCTGAGAACCCCACTGCGGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS GCA 90 bp | TTGGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATGATATCGGGTaGAGCAGCCTCAGAACCTCTTCGAACATATGTTTCTTTCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LEVGPFPGPTRYDIG*SSLRTSSNICFFPS Trigger: TGAGGGAAAGAAACATATGTTCGAAGAGGTTCTGAGGCTGCTGCACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS GCA 90 bp | CCAGAGAAGGCTCATGTGGGCATCCTGGATAAGCCTCAAAGGTGGTaGTTCTCAGACTTCCCTGCGCTTATACCTCTTCTGGGGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: PEKAHVGILDKPQRW*FSDFPALIPLLGIL Trigger: CAAGATCCCCAGAAGAGGTATAAGCGCAGGGAAGTCTGAGAAGCACCACCTTTGAGGCTTATCCAGGATGCCCACATGAGCCTTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS CCA 90 bp | CTTCAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATTGGAGGTaGGCCCTTTCCCAGGGCCAACCAGGTATGATATCGGGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQGSLSKLVVFMYWR*ALSQGQPGMISGAA Trigger: TGCTGCACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CCA 90 bp | GCCATGCTTCAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATTaGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATGATATCGGGT | + |
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Preference number: 5 (lower is better) Translates to: AMLQGSLSKLVVFMY*RWALSQGQPGMISG Trigger: ACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS TCA 90 bp | ATTCTAATCATCCTTCTATCCCCACTGCACAGCAGCCCAAGTAATTaGCGGTTGGCCACAAACCACCTCCAGGAAACTCCAGCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ILIILLSPLHSSPSN*RLATNHLQETPASW Trigger: CCAGGAGGCTGGAGTTTCCTGGAGGTGGTTTGTGGCCAACCGTCAATTACTTGGGCTGCTGTGCAGTGGGGATAGAAGGATGATTAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CCA 90 bp | TTAGGCAGCTTCTCAATGCCATGCTTCAGGGCTCACTGTCAAAGCTaGTTGTGTTTATGTATTGGAGGTGGGCCCTTTCCCAGGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: LGSFSMPCFRAHCQS*LCLCIGGGPFPRAN Trigger: GTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGAGAAGCTGCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS GCA 90 bp | CCAATGCCAAACAGCTGGATGGAAAAGCAACGAATATTTATTCCTTaGTCAAGCTCCATGCGTCCATCACAGGTGGGCTGGGGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PMPNSWMEKQRIFIP*SSSMRPSQVGWGAL Trigger: CAGAGCTCCCCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTTTTCCATCCAGCTGTTTGGCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 90 bp | GATAGGTCCAGTGTAATCAGAGTCCAGCAACGAATATTTATTCCTTaGTCAAGCTCCATGCGTCCATCACAGGTGGGCTGGGGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: DRSSVIRVQQRIFIP*SSSMRPSQVGWGAL Trigger: CAGAGCTCCCCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTGGACTCTGATTACACTGGACCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000506862.1 ENST00000510234.5 ENST00000515513.5 |
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| CDS TCA 90 bp | TGTTTATGTATTGGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATaGTATCGGGTGCAGCAGCCTCAGAACCTCTTCGAACATATGTTT | + |
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Preference number: 5 (lower is better) Translates to: CLCIGGGPFPRANQV*YRVQQPQNLFEHMF Trigger: AAACATATGTTCGAAGAGGTTCTGAGGCTGCTGCACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS TCA 90 bp | AAAGCCACTCTAGGAGACTTTCAGTTTCCGGTGGGGACCTTCCATTaGGTTTCTAGTGGAGACTTCAGCAGATGCTGTGCAAACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: KATLGDFQFPVGTFH*VSSGDFSRCCANLE Trigger: CTCCAGGTTTGCACAGCATCTGCTGAAGTCTCCACTAGAAACTCAATGGAAGGTCCCCACCGGAAACTGAAAGTCTCCTAGAGTGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510234.5 ENST00000515513.5 ENST00000664184.1 |
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| CDS CCA 90 bp | TCCATTGAGTTTCTAGTGGAGACTTCAGCAGATGCTGTGCAAACCTaGAGGGGAACTTACACTGCAAAAGGGACGATGCTGCTGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SIEFLVETSADAVQT*RGTYTAKGTMLLWS Trigger: TGACCACAGCAGCATCGTCCCTTTTGCAGTGTAAGTTCCCCTCCAGGTTTGCACAGCATCTGCTGAAGTCTCCACTAGAAACTCAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515513.5 |
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| CDS TCA 90 bp | GAATTTCTACCTGATCATTTGAGTCCAGTGGTTTGTCCAAGCTGGTaGGCAACTGGAGTCTCCAAGAGTGTGCCCCCACTACTTTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: EFLPDHLSPVVCPSW*ATGVSKSVPPLLSS Trigger: GCTTGAAAGTAGTGGGGGCACACTCTTGGAGACTCCAGTTGCTCACCAGCTTGGACAAACCACTGGACTCAAATGATCAGGTAGAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 90 bp | ATCATGATACACAGATGGAGCTGTGTATCTCACAACGTGGTAGACTaGGCGCCTCACTGCCTGCTTCCCCACAATGTTGCTTCCAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: IMIHRWSCVSHNVVD*APHCLLPHNVASKF Trigger: AAACTTGGAAGCAACATTGTGGGGAAGCAGGCAGTGAGGCGCTCAGTCTACCACGTTGTGAGATACACAGCTCCATCTGTGTATCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 90 bp | CAGGCTGATGGATCTGCCTCCTTCTTAGGCAGCTTCTCAATGCCATaGTTCAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATTGGA | + |
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Preference number: 5 (lower is better) Translates to: QADGSASFLGSFSMP*FRAHCQSWLCLCIG Trigger: TCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGAGAAGCTGCCTAAGAAGGAGGCAGATCCATCAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS GCA 90 bp | CAGTGGTTTGTCCAAGCTGGTGAGCAACTGGAGTCTCCAAGAGTGTaGCCCCACTACTTTCAAGCTCATGGTTTTCAGTTGTCTAAACAC | + |
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Preference number: 5 (lower is better) Translates to: QWFVQAGEQLESPRV*PHYFQAHGFQLSKH Trigger: GTGTTTAGACAACTGAAAACCATGAGCTTGAAAGTAGTGGGGGCACACTCTTGGAGACTCCAGTTGCTCACCAGCTTGGACAAACCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 90 bp | AGCAGATGCTGTGCAAACCTGGAGGGGAACTGTACCCCAGATATCTaGGTATTCTTTCATTTGGTTAGCTGCTCACTCACTCCTTCATGC | + |
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Preference number: 5 (lower is better) Translates to: SRCCANLEGNCTPDI*VFFHLVSCSLTPSC Trigger: GCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAAAGAATACTCAGATATCTGGGGTACAGTTCCCCTCCAGGTTTGCACAGCATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504512.5 ENST00000510234.5 ENST00000664184.1 |
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| CDS GCA 90 bp | CTGGATGGAAAGTATATGGTTTTTGTCCAGCTCTTGGAAGTCTGGTaGATTTCCAGCCCATCTCAATTCACACTGGCCACGTTTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LDGKYMVFVQLLEVW*ISSPSQFTLATFQA Trigger: AGCCTGAAACGTGGCCAGTGTGAATTGAGATGGGCTGGAAATGCACCAGACTTCCAAGAGCTGGACAAAAACCATATACTTTCCATCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS TCA 90 bp | CATTCCACTGTGTTCTCTCCAGTGATGAATTTCTACCTGATCATTTaGGTCCAGTGGTTTGTCCAAGCTGGTGAGCAACTGGAGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSTVFSPVMNFYLII*VQWFVQAGEQLESP Trigger: TGGAGACTCCAGTTGCTCACCAGCTTGGACAAACCACTGGACTCAAATGATCAGGTAGAAATTCATCACTGGAGAGAACACAGTGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 90 bp | GCAAGTCTTAAAGTTGCCCTGAAGACCTTCAGAGTGAGTTTTCGCTaGAGCCATTCCACTGTGTTCTCTCCAGTGATGAATTTCTACCTG | + |
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Preference number: 5 (lower is better) Translates to: ASLKVALKTFRVSFR*SHSTVFSPVMNFYL Trigger: CAGGTAGAAATTCATCACTGGAGAGAACACAGTGGAATGGCTTCAGCGAAAACTCACTCTGAAGGTCTTCAGGGCAACTTTAAGACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 90 bp | TTGGACTCCATCCTGTTATTAGCTGAATGTCTTCAGATATGGCACTaGTGTCTGAGCCTGTGTTCCTTCTCTTACACTGCAAAAGGGACG | + |
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Preference number: 5 (lower is better) Translates to: LDSILLLAECLQIWH*CLSLCSFSYTAKGT Trigger: CGTCCCTTTTGCAGTGTAAGAGAAGGAACACAGGCTCAGACATCAGTGCCATATCTGAAGACATTCAGCTAATAACAGGATGGAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CCA 90 bp | ACCTGGAGGGGAACTGTACCCCAGATATCTGAGTATTCTTTCATTTaGTTAGCTGCTCACTCACTCCTTCATGCGTTGATTCACACATTG | + |
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Preference number: 5 (lower is better) Translates to: TWRGTVPQISEYSFI*LAAHSLLHALIHTL Trigger: CAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAAAGAATACTCAGATATCTGGGGTACAGTTCCCCTCCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504512.5 ENST00000510234.5 ENST00000664184.1 |
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| CDS CCA 90 bp | TCCATTGAGTTTCTAGTGGAGACTTCAGCAGATGCTGTGCAAACCTaGAGGGGAACTGTACCCCAGATATCTGAGTATTCTTTCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: SIEFLVETSADAVQT*RGTVPQISEYSFIW Trigger: CCAAATGAAAGAATACTCAGATATCTGGGGTACAGTTCCCCTCCAGGTTTGCACAGCATCTGCTGAAGTCTCCACTAGAAACTCAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504512.5 ENST00000510234.5 ENST00000664184.1 |
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| CDS CCA 90 bp | CAAAGATACTTTACGTATATGGTTTTTGTCCAGCTCTTGGAAGTCTaGTGCATTTCCAGCCCATCTCAATTCACACTGGCCACGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QRYFTYMVFVQLLEV*CISSPSQFTLATFQ Trigger: CTGAAACGTGGCCAGTGTGAATTGAGATGGGCTGGAAATGCACCAGACTTCCAAGAGCTGGACAAAAACCATATACGTAAAGTATCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510234.5 |
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| CDS CCA 90 bp | GGCCAGAAGAGAAAAGACCAAAGTCTTCCTAACAAGAAGATATTATaGCTCCAGACACACTGCCTTTGTACTCAAGGTGCAACATCAACT | + |
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Preference number: 5 (lower is better) Translates to: GQKRKDQSLPNKKIL*LQTHCLCTQGATST Trigger: AGTTGATGTTGCACCTTGAGTACAAAGGCAGTGTGTCTGGAGCCATAATATCTTCTTGTTAGGAAGACTTTGGTCTTTTCTCTTCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS TCA 90 bp | TTCGAACATATGTTTCTTTCCCTCAGGTTCAAACATGACTCAGGATaGTGCTGTTGGCTTTACGTTGCTGATGACCTTAGACATCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FEHMFLSLRFKHDSG*CCWLYVADDLRHPS Trigger: TGAAGGATGTCTAAGGTCATCAGCAACGTAAAGCCAACAGCATCATCCTGAGTCATGTTTGAACCTGAGGGAAAGAAACATATGTTCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS GCA 90 bp | CTCCAGCTTGCTGACATACCTTGCAGATTTCGAAATTGTCACAACTaGATGAGCCAATTTATTAACAGAGGAATCAATGGATCTCTACCT | + |
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Preference number: 5 (lower is better) Translates to: LQLADIPCRFRNCHN*MSQFINRGINGSLP Trigger: AGGTAGAGATCCATTGATTCCTCTGTTAATAAATTGGCTCATGCAGTTGTGACAATTTCGAAATCTGCAAGGTATGTCAGCAAGCTGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 72 bp | GCCGCGCCCTGGTGGCCCAGCTTGCCTTCTTCCTGGTaGTGTAGAGAAGCTGGGTTTGGTCTCGCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAPWWPSLPSSW*CREAGFGLAGG Trigger: TCCTCCAGCGAGACCAAACCCAGCTTCTCTACAGCACCAGGAAGAAGGCAAGCTGGGCCACCAGGGCGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504512.5 |
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| CDS CAA 90 bp | CCATGGAGGATTTTCCTTCCTGGGGCCGCGCCCTGGTGGCCCAGCTaGCCTTCTTCCTGGTGCTGTAGAGAAGCTGGGTTTGGTCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PWRIFLPGAAPWWPS*PSSWCCREAGFGLA Trigger: AGCGAGACCAAACCCAGCTTCTCTACAGCACCAGGAAGAAGGCAAGCTGGGCCACCAGGGCGCGGCCCCAGGAAGGAAAATCCTCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504512.5 |
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| CDS CCA 72 bp | TCACTGCCTGCTTCCCCACAATGTTGCTTCCAAGTTTaGGGAGTGGAGGAGGTGTCTAGGGGGCCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLPASPQCCFQV*GVEEVSRGPGR Trigger: CCTTCCTGGCCCCCTAGACACCTCCTCCACTCCCCAAACTTGGAAGCAACATTGTGGGGAAGCAGGCAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS CAA 72 bp | TCACACTGGCCACGTTTCAGGCTGGGCGCTACCATATaGGGCAGTGAAATTCTGAGGGGCCTTGGGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SHWPRFRLGATI*GSEILRGLGEQ Trigger: CTGCTCCCCAAGGCCCCTCAGAATTTCACTGCCCAATATGGTAGCGCCCAGCCTGAAACGTGGCCAGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000510234.5 ENST00000664184.1 |
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| CDS TCA 72 bp | ATTGGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATaGTATCGGGTGCAGCAGCCTCAGAACCTCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: IGGGPFPRANQV*YRVQQPQNLFE Trigger: TTCGAAGAGGTTCTGAGGCTGCTGCACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CAA 90 bp | CATCTCAATTCACACTGGCCACGTTTCAGGCTGGGCGCTACCATATaGGGCAGTGAAATTCTGAGGGGCCTTGGGGAGCAGCATGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: HLNSHWPRFRLGATI*GSEILRGLGEQHGV Trigger: CACACCATGCTGCTCCCCAAGGCCCCTCAGAATTTCACTGCCCAATATGGTAGCGCCCAGCCTGAAACGTGGCCAGTGTGAATTGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000510234.5 ENST00000664184.1 |
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| CDS CCA 72 bp | TATCCCCACTGCACAGCAGCCCAAGTAATTGACGGTTaGCCACAAACCACCTCCAGGAAACTCCAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: YPHCTAAQVIDG*PQTTSRKLQPP Trigger: AGGAGGCTGGAGTTTCCTGGAGGTGGTTTGTGGCCAACCGTCAATTACTTGGGCTGCTGTGCAGTGGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CAA 72 bp | GCTGCTCACTCACTCCTTCATGCGTTGATTCACACATaGTCCCAGCTGGGCTCCCATTTCAGACTCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: AAHSLLHALIHT*SQLGSHFRLLR Trigger: GCGCAGGAGTCTGAAATGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS CAA 90 bp | GGCAGCTTCTCAATGCCATGCTTCAGGGCTCACTGTCAAAGCTGGTaGTGTTTATGTATTGGAGGTGGGCCCTTTCCCAGGGCCAACCAG | + |
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Preference number: 6 (lower is better) Translates to: GSFSMPCFRAHCQSW*CLCIGGGPFPRANQ Trigger: CTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGAGAAGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS TCA 72 bp | CACAGATGGAGCTGTGTATCTCACAACGTGGTAGACTaGGCGCCTCACTGCCTGCTTCCCCACAATGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HRWSCVSHNVVD*APHCLLPHNVA Trigger: AGCAACATTGTGGGGAAGCAGGCAGTGAGGCGCTCAGTCTACCACGTTGTGAGATACACAGCTCCATCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 72 bp | GGCCCTTTCCCAGGGCCAACCAGGTATGATATCGGGTaGAGCAGCCTCAGAACCTCTTCGAACATATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GPFPGPTRYDIG*SSLRTSSNICF Trigger: GAAACATATGTTCGAAGAGGTTCTGAGGCTGCTGCACCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CCA 72 bp | CAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATTaGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: QGSLSKLVVFMY*RWALSQGQPGM Trigger: CATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CCA 72 bp | TTGGCCACAAACCACCTCCAGGAAACTCCAGCCTCCTaGTGCCTTCAACCATCTTCAGCAATTAGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LATNHLQETPAS*CLQPSSAIRLS Trigger: GCTGAGCCTAATTGCTGAAGATGGTTGAAGGCACCAGGAGGCTGGAGTTTCCTGGAGGTGGTTTGTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CCA 72 bp | GAAAGAGTGTGCTACACAGAGGGAAGAGCCATCTCCTaGGTCTGGAGGAGCTTGGCTGGTGGAGAAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: ERVCYTEGRAIS*VWRSLAGGENR Trigger: TCTGTTTTCTCCACCAGCCAAGCTCCTCCAGACCCAGGAGATGGCTCTTCCCTCTGTGTAGCACACTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CAA 72 bp | AGTGTTCTCTCCCAGCGGGCAGACAACAACACGAGATaGTTCAGCAAGTACCACAAGTCCAGCAGGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLSQRADNNTR*FSKYHKSSRRG Trigger: CCCTCTCCTGCTGGACTTGTGGTACTTGCTGAACAATCTCGTGTTGTTGTCTGCCCGCTGGGAGAGAACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS CAA 90 bp | TGCCATGCTTCAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATaGGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTATGATATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CHASGLTVKAGCVYV*EVGPFPGPTRYDIG Trigger: CCCGATATCATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS TCA 72 bp | CCTGATCATTTGAGTCCAGTGGTTTGTCCAAGCTGGTaGGCAACTGGAGTCTCCAAGAGTGTGCCCCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: PDHLSPVVCPSW*ATGVSKSVPPL Trigger: TAGTGGGGGCACACTCTTGGAGACTCCAGTTGCTCACCAGCTTGGACAAACCACTGGACTCAAATGATCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 72 bp | GAGAGGAGGGACTGTCACTTCTCAGTGGGCGGGATCTaGGAAAGGGTCAGCCGAACAAACGTTTGTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ERRDCHFSVGGI*ERVSRTNVCSH Trigger: ATGAGAACAAACGTTTGTTCGGCTGACCCTTTCTCAGATCCCGCCCACTGAGAAGTGACAGTCCCTCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS GCA 72 bp | GCTCATGTGGGCATCCTGGATAAGCCTCAAAGGTGGTaGTTCTCAGACTTCCCTGCGCTTATACCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHVGILDKPQRW*FSDFPALIPLL Trigger: CAGAAGAGGTATAAGCGCAGGGAAGTCTGAGAAGCACCACCTTTGAGGCTTATCCAGGATGCCCACATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 72 bp | AGCAGATGCTGTGCAAACCTGGAGGGGAACTTACACTaGAAAAGGGACGATGCTGCTGTGGTCAGCTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRCCANLEGNLH*KRDDAAVVSLR Trigger: CCTTAAGCTGACCACAGCAGCATCGTCCCTTTTGCAGTGTAAGTTCCCCTCCAGGTTTGCACAGCATCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515513.5 |
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| CDS CCA 72 bp | ACAATTCATTTGATACCACATCTGTCAACAGGACCATaGAGGATTTTCCTTCCTGGGGCCGCGCCCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TIHLIPHLSTGP*RIFLPGAAPWW Trigger: CCACCAGGGCGCGGCCCCAGGAAGGAAAATCCTCCATGGTCCTGTTGACAGATGTGGTATCAAATGAATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000511707.5 |
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| CDS CAA 72 bp | TCAGGGCTCACTGTCAAAGCTGGTTGTGTTTATGTATaGGAGGTGGGCCCTTTCCCAGGGCCAACCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SGLTVKAGCVYV*EVGPFPGPTRY Trigger: ATACCTGGTTGGCCCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CAA 72 bp | GCTGCTCACTCACTCCTTCATGCGTTGATTCACACATaGTCCCAGCTGGGCTCCCTTACACTGCAAAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAHSLLHALIHT*SQLGSLTLQKG Trigger: TCCCTTTTGCAGTGTAAGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000510234.5 |
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| CDS CAA 90 bp | TCTCTTATCAGTGTTCTCTCCCAGCGGGCAGACAACAACACGAGATaGTTCAGCAAGTACCACAAGTCCAGCAGGAGAGGGCTCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLISVLSQRADNNTR*FSKYHKSSRRGLRS Trigger: GGATCTGAGCCCTCTCCTGCTGGACTTGTGGTACTTGCTGAACAATCTCGTGTTGTTGTCTGCCCGCTGGGAGAGAACACTGATAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS CAA 90 bp | ATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTTGATTCACACATaGTCCCAGCTGGGCTCCCTTACACTGCAAAAGGGACGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IWLAAHSLLHALIHT*SQLGSLTLQKGRCC Trigger: GCAGCATCGTCCCTTTTGCAGTGTAAGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000510234.5 |
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| CDS CAA 90 bp | ATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTTGATTCACACATaGTCCCAGCTGGGCTCCCATTTCAGACTCCTGCGCTCCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: IWLAAHSLLHALIHT*SQLGSHFRLLRSRT Trigger: AGTTCTGGAGCGCAGGAGTCTGAAATGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS GCA 72 bp | GCACTGATGTCTGAGCCTGTGTTCCTTCTCTTACACTaGAAAAGGGACGATGCTGCTGTGGTCAGCTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALMSEPVFLLLH*KRDDAAVVSLR Trigger: CCTTAAGCTGACCACAGCAGCATCGTCCCTTTTGCAGTGTAAGAGAAGGAACACAGGCTCAGACATCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS GCA 72 bp | AGTGGGGTTCTCAGGAAGCAACGAATATTTATTCCTTaGTCAAGCTCCATGCGTCCATCACAGGTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGVLRKQRIFIP*SSSMRPSQVGW Trigger: CCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTTCCTGAGAACCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511707.5 |
||
| CDS CCA 72 bp | TTTGAGTCCAGTGGTTTGTCCAAGCTGGTGAGCAACTaGAGTCTCCAAGAGTGTGCCCCCACTACTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FESSGLSKLVSN*SLQECAPTTFK Trigger: CTTGAAAGTAGTGGGGGCACACTCTTGGAGACTCCAGTTGCTCACCAGCTTGGACAAACCACTGGACTCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS CAA 72 bp | TCAATGCCATGCTTCAGGGCTCACTGTCAAAGCTGGTaGTGTTTATGTATTGGAGGTGGGCCCTTTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SMPCFRAHCQSW*CLCIGGGPFPR Trigger: CCTGGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CAA 72 bp | CAGTGGGGTTCTCAGGAAGCAACGAATATTTATTCCTaGCTCAAGCTCCATGCGTCCATCACAGGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QWGSQEATNIYS*LKLHASITGGL Trigger: CAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTTCCTGAGAACCCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511707.5 |
||
| CDS CAA 90 bp | AATGAACCAAGCAAAGCAGAAGGGGAAATAGCAGTGCAAGACCCCTaGACTGGAAAGAGTGTGCTACACAGAGGGAAGAGCCATCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: NEPSKAEGEIAVQDP*TGKSVLHRGKSHLL Trigger: CAGGAGATGGCTCTTCCCTCTGTGTAGCACACTCTTTCCAGTCAAGGGGTCTTGCACTGCTATTTCCCCTTCTGCTTTGCTTGGTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CAA 90 bp | CTTCTCAGTGGGCGGGATCTGAGAAAGGGTCAGCCGAACAAACGTTaGTTCTCATCCGCAGTGGGGTTCTCAGGAAGCAACGAATATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLSGRDLRKGQPNKR*FSSAVGFSGSNEYL Trigger: TAAATATTCGTTGCTTCCTGAGAACCCCACTGCGGATGAGAACAAACGTTTGTTCGGCTGACCCTTTCTCAGATCCCGCCCACTGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511707.5 |
||
| CDS TCA 72 bp | CTAGGAGACTTTCAGTTTCCGGTGGGGACCTTCCATTaGGTTTCTAGTGGAGACTTCAGCAGATGCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGDFQFPVGTFH*VSSGDFSRCCA Trigger: TGCACAGCATCTGCTGAAGTCTCCACTAGAAACTCAATGGAAGGTCCCCACCGGAAACTGAAAGTCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510234.5 ENST00000515513.5 ENST00000664184.1 |
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| CDS GCA 72 bp | GGATCTGCCTCCTTCTTAGGCAGCTTCTCAATGCCATaGTTCAGGGCTCACTGTCAAAGCTGGTTGTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GSASFLGSFSMP*FRAHCQSWLCL Trigger: TAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGAGAAGCTGCCTAAGAAGGAGGCAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
||
| CDS GCA 72 bp | ATTATGGCTCCAGACACACTGCCTTTGTACTCAAGGTaGAACATCAACTGTTCCCTGGGTCTCCAGCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IMAPDTLPLYSR*NINCSLGLQLA Trigger: AGCAAGCTGGAGACCCAGGGAACAGTTGATGTTGCACCTTGAGTACAAAGGCAGTGTGTCTGGAGCCATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS CCA 72 bp | TTCTCAATGCCATGCTTCAGGGCTCACTGTCAAAGCTaGTTGTGTTTATGTATTGGAGGTGGGCCCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSMPCFRAHCQS*LCLCIGGGPFP Trigger: GGGAAAGGGCCCACCTCCAATACATAAACACAACCAGCTTTGACAGTGAGCCCTGAAGCATGGCATTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
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| CDS CCA 72 bp | TTTCTAGTGGAGACTTCAGCAGATGCTGTGCAAACCTaGAGGGGAACTTACACTGCAAAAGGGACGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLVETSADAVQT*RGTYTAKGTML Trigger: CAGCATCGTCCCTTTTGCAGTGTAAGTTCCCCTCCAGGTTTGCACAGCATCTGCTGAAGTCTCCACTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515513.5 |
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| CDS GCA 72 bp | AGTGTAATCAGAGTCCAGCAACGAATATTTATTCCTTaGTCAAGCTCCATGCGTCCATCACAGGTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVIRVQQRIFIP*SSSMRPSQVGW Trigger: CCAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTGGACTCTGATTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506862.1 ENST00000510234.5 ENST00000515513.5 |
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| CDS GCA 72 bp | ACGTATATGGTTTTTGTCCAGCTCTTGGAAGTCTGGTaGATTTCCAGCCCATCTCAATTCACACTGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: TYMVFVQLLEVW*ISSPSQFTLAT Trigger: CGTGGCCAGTGTGAATTGAGATGGGCTGGAAATGCACCAGACTTCCAAGAGCTGGACAAAAACCATATACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510234.5 |
||
| CDS CCA 72 bp | AAGAGCCATCTCCTGGGTCTGGAGGAGCTTGGCTGGTaGAGAAAACAGAAGTTAATGGTAAACAAAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KSHLLGLEELGW*RKQKLMVNKGQ Trigger: TTGGCCTTTGTTTACCATTAACTTCTGTTTTCTCCACCAGCCAAGCTCCTCCAGACCCAGGAGATGGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506862.1 |
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| CDS CAA 72 bp | TTCATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTaGATTCACACATTGTCCCAGCTGGGCTCCCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: FIWLAAHSLLHA*IHTLSQLGSLT Trigger: TGTAAGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000510234.5 |
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| CDS CAA 72 bp | CAGTGTAATCAGAGTCCAGCAACGAATATTTATTCCTaGCTCAAGCTCCATGCGTCCATCACAGGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QCNQSPATNIYS*LKLHASITGGL Trigger: CAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTGGACTCTGATTACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000506862.1 ENST00000510234.5 ENST00000515513.5 |
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| CDS CAA 72 bp | TTCATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTaGATTCACACATTGTCCCAGCTGGGCTCCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: FIWLAAHSLLHA*IHTLSQLGSHF Trigger: GAAATGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS CAA 90 bp | GAGTATTCTTTCATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTaGATTCACACATTGTCCCAGCTGGGCTCCCATTTCAGACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EYSFIWLAAHSLLHA*IHTLSQLGSHFRLL Trigger: CAGGAGTCTGAAATGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAAAGAATACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS CAA 90 bp | GAGTATTCTTTCATTTGGTTAGCTGCTCACTCACTCCTTCATGCGTaGATTCACACATTGTCCCAGCTGGGCTCCCTTACACTGCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EYSFIWLAAHSLLHA*IHTLSQLGSLTLQK Trigger: CTTTTGCAGTGTAAGGGAGCCCAGCTGGGACAATGTGTGAATCAACGCATGAAGGAGTGAGTGAGCAGCTAACCAAATGAAAGAATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000510234.5 |
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| CDS GCA 72 bp | AACTGTTCCCTGGGTCTCCAGCTTGCTGACATACCTTaGAGATTTCGAAATTGTCACAACTGCATGAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: NCSLGLQLADIP*RFRNCHNCMSQ Trigger: TTGGCTCATGCAGTTGTGACAATTTCGAAATCTGCAAGGTATGTCAGCAAGCTGGAGACCCAGGGAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS GCA 72 bp | GCCTGTGTTCCTTCTCTTACACTGCAAAAGGGACGATaGTGCTGTGGTCAGCTTAAGGATTTTGAGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACVPSLTLQKGR*CCGQLKDFEMS Trigger: ACTCATCTCAAAATCCTTAAGCTGACCACAGCAGCATCGTCCCTTTTGCAGTGTAAGAGAAGGAACACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506862.1 |
||
| CDS GCA 72 bp | AAGTATATGGTTTTTGTCCAGCTCTTGGAAGTCTGGTaGATTTCCAGCCCATCTCAATTCACACTGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: KYMVFVQLLEVW*ISSPSQFTLAT Trigger: CGTGGCCAGTGTGAATTGAGATGGGCTGGAAATGCACCAGACTTCCAAGAGCTGGACAAAAACCATATACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664184.1 |
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| CDS CCA 72 bp | GCATTTCCTGCAAGCTCCAGGAGATACCAGTCCTTCTaGTCTATGAGCCAGACTCTGAGTAAAGTCATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AFPASSRRYQSF*SMSQTLSKVID Trigger: ATCTATGACTTTACTCAGAGTCTGGCTCATAGACCAGAAGGACTGGTATCTCCTGGAGCTTGCAGGAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507361.5 |
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| CDS CCA 72 bp | TTTCTAGTGGAGACTTCAGCAGATGCTGTGCAAACCTaGAGGGGAACTGTACCCCAGATATCTGAGTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLVETSADAVQT*RGTVPQISEYS Trigger: AGAATACTCAGATATCTGGGGTACAGTTCCCCTCCAGGTTTGCACAGCATCTGCTGAAGTCTCCACTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504512.5 ENST00000510234.5 ENST00000664184.1 |
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| CDS CCA 72 bp | AGGGTCAGCCGAACAAACGTTTGTTCTCATCCGCAGTaGGGTTCTCAGGAAGCAACGAATATTTATTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RVSRTNVCSHPQ*GSQEATNIYSL Trigger: CAAGGAATAAATATTCGTTGCTTCCTGAGAACCCCACTGCGGATGAGAACAAACGTTTGTTCGGCTGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511707.5 |
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| CDS CAA 72 bp | AAACAGCTGGATGGAAAAGCAACGAATATTTATTCCTaGCTCAAGCTCCATGCGTCCATCACAGGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KQLDGKATNIYS*LKLHASITGGL Trigger: CAGCCCACCTGTGATGGACGCATGGAGCTTGAGCAAGGAATAAATATTCGTTGCTTTTCCATCCAGCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
||
| CDS TCA 72 bp | AAAGTTGCCCTGAAGACCTTCAGAGTGAGTTTTCGCTaGAGCCATTCCACTGTGTTCTCTCCAGTGATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KVALKTFRVSFR*SHSTVFSPVMN Trigger: ATTCATCACTGGAGAGAACACAGTGGAATGGCTTCAGCGAAAACTCACTCTGAAGGTCTTCAGGGCAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507361.5 ENST00000664184.1 |
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| CDS TCA 72 bp | GACGATGCTGCTGTGGTCAGCTTAAGGATTTTGAGATaGGTTGATGATCTCAGATCTTGGATAGGTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DDAAVVSLRILR*VDDLRSWIGPV Trigger: CACTGGACCTATCCAAGATCTGAGATCATCAACTCATCTCAAAATCCTTAAGCTGACCACAGCAGCATCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000504512.5 ENST00000506862.1 ENST00000510234.5 ENST00000515513.5 |
||
| CDS TCA 72 bp | TGTGCAAACCTGGAGGGGAACTGTACCCCAGATATCTaGGTATTCTTTCATTTGGTTAGCTGCTCACTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CANLEGNCTPDI*VFFHLVSCSLT Trigger: AGTGAGTGAGCAGCTAACCAAATGAAAGAATACTCAGATATCTGGGGTACAGTTCCCCTCCAGGTTTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000504512.5 ENST00000510234.5 ENST00000664184.1 |
||
| CDS TCA 72 bp | GGTGCCTTCAACCATCTTCAGCAATTAGGCTCAGCGTaGCAGTTGTTTCAGATTGGACTCCATCCTGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GAFNHLQQLGSA*QLFQIGLHPVI Trigger: AATAACAGGATGGAGTCCAATCTGAAACAACTGTCACGCTGAGCCTAATTGCTGAAGATGGTTGAAGGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506862.1 |
||
| CDS CCA 72 bp | GTCAAGCAGAGGCAGCAGTATCCAATGCCAAACAGCTaGATGGAAAAGCAACGAATATTTATTCCTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VKQRQQYPMPNS*MEKQRIFIPCS Trigger: TGAGCAAGGAATAAATATTCGTTGCTTTTCCATCCAGCTGTTTGGCATTGGATACTGCTGCCTCTGCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507361.5 |
||
| CDS TCA 72 bp | ATGTTTCTTTCCCTCAGGTTCAAACATGACTCAGGATaGTGCTGTTGGCTTTACGTTGCTGATGACCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: MFLSLRFKHDSG*CCWLYVADDLR Trigger: TCTAAGGTCATCAGCAACGTAAAGCCAACAGCATCATCCTGAGTCATGTTTGAACCTGAGGGAAAGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507361.5 ENST00000510234.5 ENST00000515513.5 |
||
| CDS TCA 72 bp | GAAAAAGAAACAAGTGTGGCTCTCGCATCAACGACCTaGTCTTGTCACAGGAAGTTTTTGAGAGCTCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: EKETSVALASTT*SCHRKFLRAHK Trigger: TTTGTGAGCTCTCAAAAACTTCCTGTGACAAGATCAGGTCGTTGATGCGAGAGCCACACTTGTTTCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000507361.5 |
||
| CDS TCA 72 bp | ATCCTGTTATTAGCTGAATGTCTTCAGATATGGCACTaGTGTCTGAGCCTGTGTTCCTTCTCTTACACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ILLLAECLQIWH*CLSLCSFSYTA Trigger: TGCAGTGTAAGAGAAGGAACACAGGCTCAGACATCAGTGCCATATCTGAAGACATTCAGCTAATAACAGGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506862.1 |
||
| CDS CCA 72 bp | CAGTATCCAATGCCAAACAGCTGGATGGAAAGTATATaGTTTTTGTCCAGCTCTTGGAAGTCTGGTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: QYPMPNSWMESI*FLSSSWKSGAF Trigger: AAATGCACCAGACTTCCAAGAGCTGGACAAAAACCATATACTTTCCATCCAGCTGTTTGGCATTGGATACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664184.1 |
||
| CDS TCA 72 bp | GTTTCTGGATCTTTTGTTTTCCCTTGGATCAAATCATaGTACACAGATGGAGCTGTGTATCTCACAACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGSFVFPWIKS*YTDGAVYLTTW Trigger: CCACGTTGTGAGATACACAGCTCCATCTGTGTATCATGATTTGATCCAAGGGAAAACAAAAGATCCAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507361.5 |
||
| CDS CAA 90 bp | GAACCAATAAATATCAAAGTCGTGTCTAAGCAGAGAACAATTCATTaGATACCACATCTGTCAACAGGACCATGGAGGATTTTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EPINIKVVSKQRTIH*IPHLSTGPWRIFLP Trigger: AGGAAGGAAAATCCTCCATGGTCCTGTTGACAGATGTGGTATCAAATGAATTGTTCTCTGCTTAGACACGACTTTGATATTTATTGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504512.5 ENST00000511707.5 |
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