Pregenerated sensors for LINC01405 (Homo sapiens)
Ensembl gene IDs: ENSG00000185847Ensembl transcript IDs: ENST00000331096.2, ENST00000547607.1, ENST00000548368.6, ENST00000553177.6, ENST00000652865.1, ENST00000654512.1, ENST00000657482.1, ENST00000658431.1, ENST00000658709.1, ENST00000666099.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCCCTCTCCAGATTCCGCGCCCTTGGTTCGCCAGCGGGAAGCCGTaGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTGCTGGGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: RPLQIPRPWFASGKP*LRGAEVAPPPAGQF Trigger: AAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTGGAGAGGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 90 bp | CGGGAAGCCGTGGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTGCTaGGCAGTTTGGAGAAATGCAGCGCGGACGCTCAGCGATTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: REAVAARSRGSTAPC*AVWRNAARTLSDWA Trigger: GGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCACGGCTTCCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS GCA 90 bp | CAGCGGGAAGCCGTGGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTaGTGGGCAGTTTGGAGAAATGCAGCGCGGACGCTCAGCGATTGG | + |
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Preference number: 5 (lower is better) Translates to: QREAVAARSRGSTAP*WAVWRNAARTLSDW Trigger: CCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCACGGCTTCCCGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 90 bp | GGTGGGAGGAAAGATGTTCCTCGCCCTCTCCAGATTCCGCGCCCTTaGTTCGCCAGCGGGAAGCCGTGGCTGCGCGGAGCCGAGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: GGRKDVPRPLQIPRP*FASGKPWLRGAEVA Trigger: TGCTACCTCGGCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTGGAGAGGGCGAGGAACATCTTTCCTCCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS GCA 90 bp | GCCCTCGGGCCCTTGGGGAGGGACGGGCACTGTTCCCCAGAGCAGTaGAATCAATGCTGGGAAACTGAAGCTGCGAGTGTCCGAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: ALGPLGRDGHCSPEQ*NQCWETEAASVRGT Trigger: GGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAAGGGCCCGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GTGGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTGCTGGGCAGTTTaGAGAAATGCAGCGCGGACGCTCAGCGATTGGGCCAGATACATT | + |
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Preference number: 5 (lower is better) Translates to: VAARSRGSTAPCWAV*RNAARTLSDWARYI Trigger: AATGTATCTGGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 90 bp | AGCAGCACGGATGAGACGGGTCTGGCAGGCTTGGCGGGGGACAGGTaGGAGGAAAGATGTTCCTCGCCCTCTCCAGATTCCGCGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSTDETGLAGLAGDR*EERCSSPSPDSAPL Trigger: CAAGGGCGCGGAATCTGGAGAGGGCGAGGAACATCTTTCCTCCCACCTGTCCCCCGCCAAGCCTGCCAGACCCGTCTCATCCGTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 90 bp | CCACCCCTGGAAGAGGATGTCACTTCCCAGAAGCCCTCGGGCCCTTaGGGAGGGACGGGCACTGTTCCCCAGAGCAGTGCAATCAATGCT | + |
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Preference number: 5 (lower is better) Translates to: PPLEEDVTSQKPSGP*GGTGTVPQSSAINA Trigger: AGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAAGGGCCCGAGGGCTTCTGGGAAGTGACATCCTCTTCCAGGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 90 bp | CTGAAGCTGCGAGTGTCCGAGGGACCCTGGGATGTCTCTGGGGTCTaGGTAGGTACCCATGGAGGAGCAGAGATGGTGGATGAAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LKLRVSEGPWDVSGV*VGTHGGAEMVDEGG Trigger: GCCTCCTTCATCCACCATCTCTGCTCCTCCATGGGTACCTACGCAGACCCCAGAGACATCCCAGGGTCCCTCGGACACTCGCAGCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 90 bp | CCCTTGGGGAGGGACGGGCACTGTTCCCCAGAGCAGTGCAATCAATaGTGGGAAACTGAAGCTGCGAGTGTCCGAGGGACCCTGGGATGT | + |
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Preference number: 5 (lower is better) Translates to: PLGRDGHCSPEQCNQ*WETEAASVRGTLGC Trigger: ACATCCCAGGGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | CCTGAATGGCTCCATTCTCAGGCAATCTTCCTCCGCAGCACACGATaGCTGTCAGCAGCACCTCGGGGCCTCTGCCCTGGCACTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PEWLHSQAIFLRSTR*LSAAPRGLCPGTFL Trigger: GAGGAAAGTGCCAGGGCAGAGGCCCCGAGGTGCTGCTGACAGCCATCGTGTGCTGCGGAGGAAGATTGCCTGAGAATGGAGCCATTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS TCA 90 bp | GGACGGGCACTGTTCCCCAGAGCAGTGCAATCAATGCTGGGAAACTaGAGCTGCGAGTGTCCGAGGGACCCTGGGATGTCTCTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GRALFPRAVQSMLGN*SCECPRDPGMSLGS Trigger: AGACCCCAGAGACATCCCAGGGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 90 bp | GCCAAAGCCAGCGCGCCTGGAATCCGGGAAGGGAGTTCTTTCTATTaGAGGCCAGAAGTGGGGTACATCCCACTTGCCTTGAGGGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: AKASAPGIREGSSFY*RPEVGYIPLALRAP Trigger: AGGGGCCCTCAAGGCAAGTGGGATGTACCCCACTTCTGGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GTGCAGCCCACCATGACCATTCCACGTGGCCAAAGCCAGCGCGCCTaGAATCCGGGAAGGGAGTTCTTTCTATTGCAGGCCAGAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: VQPTMTIPRGQSQRA*NPGREFFLLQARSG Trigger: CCCACTTCTGGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | TTGGGGAGGGACGGGCACTGTTCCCCAGAGCAGTGCAATCAATGCTaGGAAACTGAAGCTGCGAGTGTCCGAGGGACCCTGGGATGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LGRDGHCSPEQCNQC*ETEAASVRGTLGCL Trigger: GAGACATCCCAGGGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 90 bp | AGTTGGGATTCGAACCTGCAATGTGGTTCCCAGTGCAGCCCACCATaGCCATTCCACGTGGCCAAAGCCAGCGCGCCTGGAATCCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: SWDSNLQCGSQCSPP*PFHVAKASAPGIRE Trigger: TTCCCGGATTCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | ACCTGCAATGTGGTTCCCAGTGCAGCCCACCATGACCATTCCACGTaGCCAAAGCCAGCGCGCCTGGAATCCGGGAAGGGAGTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TCNVVPSAAHHDHST*PKPARLESGKGVLS Trigger: AGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GCAATCAATGCTGGGAAACTGAAGCTGCGAGTGTCCGAGGGACCCTaGGATGTCTCTGGGGTCTGCGTAGGTACCCATGGAGGAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: AINAGKLKLRVSEGP*DVSGVCVGTHGGAE Trigger: CTCTGCTCCTCCATGGGTACCTACGCAGACCCCAGAGACATCCCAGGGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 90 bp | CGGGGCTCTGCTTCATCGAATCTCAGTTTTGTGAAGCTCTCCTGCTaGGCCCGGCCTCTGCTCCAGATTCATCCGTATGGGCAGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: RGSASSNLSFVKLSC*ARPLLQIHPYGQTS Trigger: GGAGGTCTGCCCATACGGATGAATCTGGAGCAGAGGCCGGGCTCAGCAGGAGAGCTTCACAAAACTGAGATTCGATGAAGCAGAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS GCA 90 bp | CTCAAGGTCACGCAGCTCCTACACAGTGCAGTTGGGATTCGAACCTaGAATGTGGTTCCCAGTGCAGCCCACCATGACCATTCCACGTGG | + |
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Preference number: 5 (lower is better) Translates to: LKVTQLLHSAVGIRT*NVVPSAAHHDHSTW Trigger: CCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGTGACCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GAAGCTCTCCTGCTGAGCCCGGCCTCTGCTCCAGATTCATCCGTATaGGCAGACCTCCTAAAGACAGGTTCAGTCCAAGGACAGGTTCGA | + |
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Preference number: 5 (lower is better) Translates to: EALLLSPASAPDSSV*ADLLKTGSVQGQVR Trigger: TCGAACCTGTCCTTGGACTGAACCTGTCTTTAGGAGGTCTGCCCATACGGATGAATCTGGAGCAGAGGCCGGGCTCAGCAGGAGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS CCA 90 bp | TCACGCAGCTCCTACACAGTGCAGTTGGGATTCGAACCTGCAATGTaGTTCCCAGTGCAGCCCACCATGACCATTCCACGTGGCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SRSSYTVQLGFEPAM*FPVQPTMTIPRGQS Trigger: GCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 90 bp | GACCTGGCTTCAAGTGCTAGCCCAACAATAACTGGCCTGGTGACTTaGACTTCTGTGGGTCTCATTTTCCTGTCCTCGGGGCCTCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: DLASSASPTITGLVT*TSVGLIFLSSGPLP Trigger: GGGCAGAGGCCCCGAGGACAGGAAAATGAGACCCACAGAAGTTCAAGTCACCAGGCCAGTTATTGTTGGGCTAGCACTTGAAGCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547607.1 |
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| CDS GCA 90 bp | TTCCTCCGCAGCACACGATGGCTGTCAGCAGCACCTCGGGGCCTCTaGCCTGGCACTTTCCTCTGCCTGAAATGCTTTTCTCCAAATATT | + |
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Preference number: 5 (lower is better) Translates to: FLRSTRWLSAAPRGL*PGTFLCLKCFSPNI Trigger: AATATTTGGAGAAAAGCATTTCAGGCAGAGGAAAGTGCCAGGGCAGAGGCCCCGAGGTGCTGCTGACAGCCATCGTGTGCTGCGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS TCA 90 bp | TTGTCAGGAGGCGACAGACCGAGGTGCTATCCTCTCTGGGGCAACTaGACTGCCACCAGAAAAATGACCCATAAACTCGAGATGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSGGDRPRCYPLWGN*TATRKMTHKLEMEP Trigger: GGGCTCCATCTCGAGTTTATGGGTCATTTTTCTGGTGGCAGTTCAGTTGCCCCAGAGAGGATAGCACCTCGGTCTGTCGCCTCCTGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 90 bp | TGTCTCGGTCAAAGTTGCCCTCCCTGGAGAGTTCCAGCCCCAGTCTaGTCCAAGTTCAGTCCACACAGAGCATTCACTGACACTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: CLGQSCPPWRVPAPV*SKFSPHRAFTDTPQ Trigger: TTGAGGAGTGTCAGTGAATGCTCTGTGTGGACTGAACTTGGAGCAGACTGGGGCTGGAACTCTCCAGGGAGGGCAACTTTGACCGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
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| CDS CCA 90 bp | AGGACTTGGCAAACCCTAAGATGTCTCGGTCAAAGTTGCCCTCCCTaGAGAGTTCCAGCCCCAGTCTGCTCCAAGTTCAGTCCACACAGA | + |
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Preference number: 5 (lower is better) Translates to: RTWQTLRCLGQSCPP*RVPAPVCSKFSPHR Trigger: TCTGTGTGGACTGAACTTGGAGCAGACTGGGGCTGGAACTCTCCAGGGAGGGCAACTTTGACCGAGACATCTTAGGGTTTGCCAAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
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| CDS CCA 90 bp | CATAGGGAGGCTGTTGGAGAGAGAGAGAACACGGAAGGCTCCGGGTaGATTTGTGCAGCCCTTAAAACGGGGCTCTGCTTCATCGAATCT | + |
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Preference number: 5 (lower is better) Translates to: HREAVGERENTEGSG*ICAALKTGLCFIES Trigger: AGATTCGATGAAGCAGAGCCCCGTTTTAAGGGCTGCACAAATCCACCCGGAGCCTTCCGTGTTCTCTCTCTCTCCAACAGCCTCCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GGCCTAAGGGGTAAGGAGACGTCTCCTTTCCCCCATGCTGGCATTTaGGTCACATGTGGAATCCGTGGTAAACTGAGGCACCTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GLRGKETSPFPHAGI*VTCGIRGKLRHLSS Trigger: AGAAGACAGGTGCCTCAGTTTACCACGGATTCCACATGTGACCCAAATGCCAGCATGGGGGAAAGGAGACGTCTCCTTACCCCTTAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 90 bp | CGAGGTGCTATCCTCTCTGGGGCAACTGAACTGCCACCAGAAAAATaGCCCATAAACTCGAGATGGAGCCCGCTTTCCCTCTGTGGATTC | + |
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Preference number: 5 (lower is better) Translates to: RGAILSGATELPPEK*PINSRWSPLSLCGF Trigger: GAATCCACAGAGGGAAAGCGGGCTCCATCTCGAGTTTATGGGTCATTTTTCTGGTGGCAGTTCAGTTGCCCCAGAGAGGATAGCACCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 90 bp | GGAGCACCTTCAGATCCTGATGCTGGTCTGACACCTCGGGGCCTCTaGCCTGGCACTTTCCTCTGCCTGAAATGCTTTTCTCCAAATATT | + |
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Preference number: 5 (lower is better) Translates to: GAPSDPDAGLTPRGL*PGTFLCLKCFSPNI Trigger: AATATTTGGAGAAAAGCATTTCAGGCAGAGGAAAGTGCCAGGGCAGAGGCCCCGAGGTGTCAGACCAGCATCAGGATCTGAAGGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658709.1 |
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| CDS TCA 90 bp | TCCAAGGACAGGTTCGAGGTCGAAGATGGGGTTCAGAGCTCTCTCTaGGGGCCCATGCTCTCTAGTTTCCTATTTGCAGGCACACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SKDRFEVEDGVQSSL*GPMLSSFLFAGTPF Trigger: AAAAGGTGTGCCTGCAAATAGGAAACTAGAGAGCATGGGCCCTCAGAGAGAGCTCTGAACCCCATCTTCGACCTCGAACCTGTCCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS TCA 90 bp | TCTACGAGGAAGGTACTGTTGTTCCCACTTCACAGGGGAGGTGATTaGGGCACAGAAGGGTCAACCAATTCACTCAAGGTCACGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: STRKVLLFPLHRGGD*GTEGSTNSLKVTQL Trigger: GAGCTGCGTGACCTTGAGTGAATTGGTTGACCCTTCTGTGCCTCAATCACCTCCCCTGTGAAGTGGGAACAACAGTACCTTCCTCGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 90 bp | TCCCCCATGCTGGCATTTGGGTCACATGTGGAATCCGTGGTAAACTaGGGCACCTGTCTTCTCCTTCCCAGGTCCAATAATCCCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPMLAFGSHVESVVN*GTCLLLPRSNNPIL Trigger: AAGGATGGGATTATTGGACCTGGGAAGGAGAAGACAGGTGCCTCAGTTTACCACGGATTCCACATGTGACCCAAATGCCAGCATGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | GTCTCATTTTCCTGTCCGTTCTGCAGGCTTAACCAGCAGTATGACTaGGAGACCTCAGGAAACTTACACTCATGGCGGAAGGCAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: VSFSCPFCRLNQQYD*ETSGNLHSWRKAKG Trigger: CCCCTTTGCCTTCCGCCATGAGTGTAAGTTTCCTGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGACAGGAAAATGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 90 bp | TCCCAGACTGCCCATAAATTGACCTTTATACCTTGCTGGTCAGACTaGGTTACATGCCCATCCTCTAAGCCAGAGGCTGAACCCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: SQTAHKLTFIPCWSD*VTCPSSKPEAEPTF Trigger: GAAGGTGGGTTCAGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGCAGTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS TCA 90 bp | GAGGGCCCATGCTCTCTAGTTTCCTATTTGCAGGCACACCTTTTATaGACAGCTTGGTTCTGGGCTAAAAATGCGTGGGAAAGAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: EGPCSLVSYLQAHLL*TAWFWAKNAWERAE Trigger: CTCAGCTCTTTCCCACGCATTTTTAGCCCAGAACCAAGCTGTTCATAAAAGGTGTGCCTGCAAATAGGAAACTAGAGAGCATGGGCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS GCA 90 bp | CGCTCAGCGATTGGGCCAGATACATTTCAAACAAGTACACCGTTCTaGAGGCTTAACCAGCAGTATGACTGGGAGACCTCAGGAAACTTA | + |
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Preference number: 5 (lower is better) Translates to: RSAIGPDTFQTSTPF*RLNQQYDWETSGNL Trigger: TAAGTTTCCTGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGTGTACTTGTTTGAAATGTATCTGGCCCAATCGCTGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS GCA 90 bp | GCCCATAAATTGACCTTTATACCTTGCTGGTCAGACTGGGTTACATaGCCATCCTCTAAGCCAGAGGCTGAACCCACCTTCCTTAAATCC | + |
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Preference number: 5 (lower is better) Translates to: AHKLTFIPCWSDWVT*PSSKPEAEPTFLKS Trigger: GGATTTAAGGAAGGTGGGTTCAGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS GCA 90 bp | GAAGAAAAACTTTCCCAGACTGCCCATAAATTGACCTTTATACCTTaGTGGTCAGACTGGGTTACATGCCCATCCTCTAAGCCAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: EEKLSQTAHKLTFIP*WSDWVTCPSSKPEA Trigger: AGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGCAGTCTGGGAAAGTTTTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS GCA 90 bp | GAAACACGCAGGCCTCACAGACTGTTGAGCAAAGTGCACAACCTTTaGTCCAACATTCCCACTCTAGAAGCACATCCGAAGGAAATAATT | + |
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Preference number: 5 (lower is better) Translates to: ETRRPHRLLSKVHNL*SNIPTLEAHPKEII Trigger: AATTATTTCCTTCGGATGTGCTTCTAGAGTGGGAATGTTGGAGCAAAGGTTGTGCACTTTGCTCAACAGTCTGTGAGGCCTGCGTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS CCA 90 bp | GAAAAACTTTCCCAGACTGCCCATAAATTGACCTTTATACCTTGCTaGTCAGACTGGGTTACATGCCCATCCTCTAAGCCAGAGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EKLSQTAHKLTFIPC*SDWVTCPSSKPEAE Trigger: TTCAGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGCAGTCTGGGAAAGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS CCA 90 bp | AGAAAAATGACCCATAAACTCGAGATGGAGCCCGCTTTCCCTCTGTaGATTCCACCCTCCATTACGTCTCTCCCTCAATTAATTAATAAA | + |
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Preference number: 5 (lower is better) Translates to: RKMTHKLEMEPAFPL*IPPSITSLPQLINK Trigger: TTTATTAATTAATTGAGGGAGAGACGTAATGGAGGGTGGAATCCACAGAGGGAAAGCGGGCTCCATCTCGAGTTTATGGGTCATTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | CAGATTCCGCGCCCTTGGTTCGCCAGCGGGAAGCCGTaGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QIPRPWFASGKP*LRGAEVAPPPA Trigger: AGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 72 bp | GTGGCTGCGCGGAGCCGAGGTAGCACCGCCCCCTGCTaGGCAGTTTGGAGAAATGCAGCGCGGACGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VAARSRGSTAPC*AVWRNAARTLS Trigger: GCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCGCGCAGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 72 bp | CGGAGCCGAGGTAGCACCGCCCCCTGCTGGGCAGTTTaGAGAAATGCAGCGCGGACGCTCAGCGATTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRGSTAPCWAV*RNAARTLSDWA Trigger: GGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGGGCGGTGCTACCTCGGCTCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CAA 90 bp | AGGTGGGAGGAAAGATGTTCCTCGCCCTCTCCAGATTCCGCGCCCTaGGTTCGCCAGCGGGAAGCCGTGGCTGCGCGGAGCCGAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RWEERCSSPSPDSAP*VRQREAVAARSRGS Trigger: GCTACCTCGGCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTGGAGAGGGCGAGGAACATCTTTCCTCCCACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CCA 72 bp | AAAGATGTTCCTCGCCCTCTCCAGATTCCGCGCCCTTaGTTCGCCAGCGGGAAGCCGTGGCTGCGCGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDVPRPLQIPRP*FASGKPWLRGA Trigger: GGCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTGGAGAGGGCGAGGAACATCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CAA 72 bp | GAAAGATGTTCCTCGCCCTCTCCAGATTCCGCGCCCTaGGTTCGCCAGCGGGAAGCCGTGGCTGCGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ERCSSPSPDSAP*VRQREAVAARS Trigger: GCTCCGCGCAGCCACGGCTTCCCGCTGGCGAACCAAGGGCGCGGAATCTGGAGAGGGCGAGGAACATCTTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CCA 72 bp | GAAGCAGCAGCACGGATGAGACGGGTCTGGCAGGCTTaGCGGGGGACAGGTGGGAGGAAAGATGTTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: EAAARMRRVWQA*RGTGGRKDVPR Trigger: GCGAGGAACATCTTTCCTCCCACCTGTCCCCCGCCAAGCCTGCCAGACCCGTCTCATCCGTGCTGCTGCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CCA 72 bp | GTGGTTCCCAGTGCAGCCCACCATGACCATTCCACGTaGCCAAAGCCAGCGCGCCTGGAATCCGGGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VVPSAAHHDHST*PKPARLESGKG Trigger: TCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | GAAGAGGATGTCACTTCCCAGAAGCCCTCGGGCCCTTaGGGAGGGACGGGCACTGTTCCCCAGAGCAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EEDVTSQKPSGP*GGTGTVPQSSA Trigger: TGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAAGGGCCCGAGGGCTTCTGGGAAGTGACATCCTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | GATGAGACGGGTCTGGCAGGCTTGGCGGGGGACAGGTaGGAGGAAAGATGTTCCTCGCCCTCTCCAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: DETGLAGLAGDR*EERCSSPSPDS Trigger: GGAATCTGGAGAGGGCGAGGAACATCTTTCCTCCCACCTGTCCCCCGCCAAGCCTGCCAGACCCGTCTCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CAA 72 bp | AGAAGCAGCAGCACGGATGAGACGGGTCTGGCAGGCTaGGCGGGGGACAGGTGGGAGGAAAGATGTTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSTDETGLAG*AGDRWEERCSS Trigger: CGAGGAACATCTTTCCTCCCACCTGTCCCCCGCCAAGCCTGCCAGACCCGTCTCATCCGTGCTGCTGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CAA 90 bp | GGCCAAAGCCAGCGCGCCTGGAATCCGGGAAGGGAGTTCTTTCTATaGCAGGCCAGAAGTGGGGTACATCCCACTTGCCTTGAGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQSQRAWNPGREFFL*QARSGVHPTCLEGP Trigger: GGGGCCCTCAAGGCAAGTGGGATGTACCCCACTTCTGGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS TCA 72 bp | TCGAACCTGCAATGTGGTTCCCAGTGCAGCCCACCATaGCCATTCCACGTGGCCAAAGCCAGCGCGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SNLQCGSQCSPP*PFHVAKASAPG Trigger: TCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | GAAGCTGCGAGTGTCCGAGGGACCCTGGGATGTCTCTaGGGTCTGCGTAGGTACCCATGGAGGAGCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: EAASVRGTLGCL*GLRRYPWRSRD Trigger: ATCTCTGCTCCTCCATGGGTACCTACGCAGACCCCAGAGACATCCCAGGGTCCCTCGGACACTCGCAGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CAA 90 bp | CTGATTTTCAGAAGCAGCAGCACGGATGAGACGGGTCTGGCAGGCTaGGCGGGGGACAGGTGGGAGGAAAGATGTTCCTCGCCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LIFRSSSTDETGLAG*AGDRWEERCSSPSP Trigger: TGGAGAGGGCGAGGAACATCTTTCCTCCCACCTGTCCCCCGCCAAGCCTGCCAGACCCGTCTCATCCGTGCTGCTGCTTCTGAAAATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS GCA 72 bp | AGGGACGGGCACTGTTCCCCAGAGCAGTGCAATCAATaGTGGGAAACTGAAGCTGCGAGTGTCCGAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RDGHCSPEQCNQ*WETEAASVRGT Trigger: GGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS GCA 72 bp | CCCTTGGGGAGGGACGGGCACTGTTCCCCAGAGCAGTaGAATCAATGCTGGGAAACTGAAGCTGCGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLGRDGHCSPEQ*NQCWETEAASV Trigger: GACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTCCCTCCCCAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | GACGGGCACTGTTCCCCAGAGCAGTGCAATCAATGCTaGGAAACTGAAGCTGCGAGTGTCCGAGGGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGHCSPEQCNQC*ETEAASVRGTL Trigger: CAGGGTCCCTCGGACACTCGCAGCTTCAGTTTCCCAGCATTGATTGCACTGCTCTGGGGAACAGTGCCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CAA 90 bp | TCCCTCCCCATGGCCCAGCCTGCTATTGTCTCTCGGTCCCTACAGTaGCTCCTCATAGGGAGGCTGTTGGAGAGAGAGAGAACACGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPMAQPAIVSRSLQ*LLIGRLLERERTRK Trigger: CTTCCGTGTTCTCTCTCTCTCCAACAGCCTCCCTATGAGGAGCAACTGTAGGGACCGAGAGACAATAGCAGGCTGGGCCATGGGGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | ACCATGACCATTCCACGTGGCCAAAGCCAGCGCGCCTaGAATCCGGGAAGGGAGTTCTTTCTATTGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TMTIPRGQSQRA*NPGREFFLLQA Trigger: GGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTGGCTTTGGCCACGTGGAATGGTCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CAA 90 bp | AGTTCTTTCTATTGCAGGCCAGAAGTGGGGTACATCCCACTTGCCTaGAGGGCCCCTAGTGCTTGTCAGGAGGCGACAGACCGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSFYCRPEVGYIPLA*RAPSACQEATDRGA Trigger: AGCACCTCGGTCTGTCGCCTCCTGACAAGCACTAGGGGCCCTCAAGGCAAGTGGGATGTACCCCACTTCTGGCCTGCAATAGAAAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 72 bp | AGCGCGCCTGGAATCCGGGAAGGGAGTTCTTTCTATTaGAGGCCAGAAGTGGGGTACATCCCACTTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAPGIREGSSFY*RPEVGYIPLAL Trigger: CAAGGCAAGTGGGATGTACCCCACTTCTGGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | ACAGGTTCAGTCCAAGGACAGGTTCGAGGTCGAAGATaGGGTTCAGAGCTCTCTCTGAGGGCCCATGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSVQGQVRGRR*GSELSLRAHAL Trigger: GAGAGCATGGGCCCTCAGAGAGAGCTCTGAACCCCATCTTCGACCTCGAACCTGTCCTTGGACTGAACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
||
| CDS CCA 72 bp | CTGCTGAGCCCGGCCTCTGCTCCAGATTCATCCGTATaGGCAGACCTCCTAAAGACAGGTTCAGTCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSPASAPDSSV*ADLLKTGSVQG Trigger: TCCTTGGACTGAACCTGTCTTTAGGAGGTCTGCCCATACGGATGAATCTGGAGCAGAGGCCGGGCTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
||
| CDS CCA 72 bp | GCTGTTGGAGAGAGAGAGAACACGGAAGGCTCCGGGTaGATTTGTGCAGCCCTTAAAACGGGGCTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVGERENTEGSG*ICAALKTGLCF Trigger: GAAGCAGAGCCCCGTTTTAAGGGCTGCACAAATCCACCCGGAGCCTTCCGTGTTCTCTCTCTCTCCAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 72 bp | CAGCGCGCCTGGAATCCGGGAAGGGAGTTCTTTCTATaGCAGGCCAGAAGTGGGGTACATCCCACTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRAWNPGREFFL*QARSGVHPTCL Trigger: AAGGCAAGTGGGATGTACCCCACTTCTGGCCTGCAATAGAAAGAACTCCCTTCCCGGATTCCAGGCGCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 90 bp | TCATGGCGGAAGGCAAAGGGGAAACAAGCACCTTCTCCGAGGCCCTaGCTGGCCACACACCTTCATTCCAGAGAGGATTCCATGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SWRKAKGKQAPSPRP*LATHLHSREDSMSH Trigger: ATGGCTCATGGAATCCTCTCTGGAATGAAGGTGTGTGGCCAGCAAGGGCCTCGGAGAAGGTGCTTGTTTCCCCTTTGCCTTCCGCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658431.1 |
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| CDS CAA 90 bp | GCTATTGTCTCTCGGTCCCTACAGTTGCTCCTCATAGGGAGGCTGTaGGAGAGAGAGAGAACACGGAAGGCTCCGGGTGGATTTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AIVSRSLQLLLIGRL*ERERTRKAPGGFVQ Trigger: CTGCACAAATCCACCCGGAGCCTTCCGTGTTCTCTCTCTCTCCAACAGCCTCCCTATGAGGAGCAACTGTAGGGACCGAGAGACAATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 72 bp | GATGGCTTGAGGCTGGGAGTTCAAGACCAGCCGTTCTaGAGGCTTAACCAGCAGTATGACTGGGAGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DGLRLGVQDQPF*RLNQQYDWETS Trigger: TGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGCTGGTCTTGAACTCCCAGCCTCAAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547607.1 ENST00000548368.6 ENST00000553177.6 ENST00000654512.1 ENST00000658709.1 ENST00000666099.1 |
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| CDS GCA 72 bp | CAAAGTTGCCCTCCCTGGAGAGTTCCAGCCCCAGTCTaGTCCAAGTTCAGTCCACACAGAGCATTCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QSCPPWRVPAPV*SKFSPHRAFTD Trigger: GTCAGTGAATGCTCTGTGTGGACTGAACTTGGAGCAGACTGGGGCTGGAACTCTCCAGGGAGGGCAACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
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| CDS GCA 72 bp | TCAGATCCTGATGCTGGTCTGACACCTCGGGGCCTCTaGCCTGGCACTTTCCTCTGCCTGAAATGCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDPDAGLTPRGL*PGTFLCLKCFS Trigger: AGAAAAGCATTTCAGGCAGAGGAAAGTGCCAGGGCAGAGGCCCCGAGGTGTCAGACCAGCATCAGGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658709.1 |
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| CDS GCA 72 bp | ACGCAGCTCCTACACAGTGCAGTTGGGATTCGAACCTaGAATGTGGTTCCCAGTGCAGCCCACCATGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: TQLLHSAVGIRT*NVVPSAAHHDH Trigger: ATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 72 bp | AAGGCAAAGGGGAAACAAGCACCTTCTCCGAGGCCCTaGCTGGCCACACACCTTCATTCCAGAGAGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: KAKGKQAPSPRP*LATHLHSREDS Trigger: GGAATCCTCTCTGGAATGAAGGTGTGTGGCCAGCAAGGGCCTCGGAGAAGGTGCTTGTTTCCCCTTTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658431.1 |
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| CDS CAA 72 bp | ATGGCCCAGCCTGCTATTGTCTCTCGGTCCCTACAGTaGCTCCTCATAGGGAGGCTGTTGGAGAGAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MAQPAIVSRSLQ*LLIGRLLERER Trigger: TCTCTCTCTCTCCAACAGCCTCCCTATGAGGAGCAACTGTAGGGACCGAGAGACAATAGCAGGCTGGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 90 bp | CCCCTGCTGGGCAGTTTGGAGAAATGCAGCGCGGACGCTCAGCGATaGGGCCAGATACATTTCAAACAAGTACACCGTTCTGCAGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PLLGSLEKCSADAQR*GQIHFKQVHRSAGL Trigger: TAAGCCTGCAGAACGGTGTACTTGTTTGAAATGTATCTGGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCCCAGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CAA 90 bp | ACATCTGCTGAGGACTTGGCAAACCCTAAGATGTCTCGGTCAAAGTaGCCCTCCCTGGAGAGTTCCAGCCCCAGTCTGCTCCAAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSAEDLANPKMSRSK*PSLESSSPSLLQVQ Trigger: CTGAACTTGGAGCAGACTGGGGCTGGAACTCTCCAGGGAGGGCAACTTTGACCGAGACATCTTAGGGTTTGCCAAGTCCTCAGCAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
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| CDS TCA 72 bp | GGCGACAGACCGAGGTGCTATCCTCTCTGGGGCAACTaGACTGCCACCAGAAAAATGACCCATAAACTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GDRPRCYPLWGN*TATRKMTHKLE Trigger: CTCGAGTTTATGGGTCATTTTTCTGGTGGCAGTTCAGTTGCCCCAGAGAGGATAGCACCTCGGTCTGTCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | GACCAGCCGTTCTGCAGGCTTAACCAGCAGTATGACTaGGAGACCTCAGGAAACTTACACTCATGGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DQPFCRLNQQYD*ETSGNLHSWRK Trigger: CTTCCGCCATGAGTGTAAGTTTCCTGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547607.1 ENST00000548368.6 ENST00000553177.6 ENST00000654512.1 ENST00000658709.1 ENST00000666099.1 |
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| CDS CCA 72 bp | TCCTACACAGTGCAGTTGGGATTCGAACCTGCAATGTaGTTCCCAGTGCAGCCCACCATGACCATTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: SYTVQLGFEPAM*FPVQPTMTIPR Trigger: ACGTGGAATGGTCATGGTGGGCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | TTCACTCAAGGTCACGCAGCTCCTACACAGTGCAGTTaGGATTCGAACCTGCAATGTGGTTCCCAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTQGHAAPTQCS*DSNLQCGSQCS Trigger: GCTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGTGACCTTGAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | GGTAAGGAGACGTCTCCTTTCCCCCATGCTGGCATTTaGGTCACATGTGGAATCCGTGGTAAACTGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GKETSPFPHAGI*VTCGIRGKLRH Trigger: GTGCCTCAGTTTACCACGGATTCCACATGTGACCCAAATGCCAGCATGGGGGAAAGGAGACGTCTCCTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 72 bp | ATCCTCTCTGGGGCAACTGAACTGCCACCAGAAAAATaGCCCATAAACTCGAGATGGAGCCCGCTTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILSGATELPPEK*PINSRWSPLSL Trigger: GAGGGAAAGCGGGCTCCATCTCGAGTTTATGGGTCATTTTTCTGGTGGCAGTTCAGTTGCCCCAGAGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | TCCTGTCCGTTCTGCAGGCTTAACCAGCAGTATGACTaGGAGACCTCAGGAAACTTACACTCATGGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCPFCRLNQQYD*ETSGNLHSWRK Trigger: CTTCCGCCATGAGTGTAAGTTTCCTGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 72 bp | ATTCACTCAAGGTCACGCAGCTCCTACACAGTGCAGTaGGGATTCGAACCTGCAATGTGGTTCCCAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IHSRSRSSYTVQ*GFEPAMWFPVQ Trigger: CTGCACTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGTGACCTTGAGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 72 bp | TCAAGTGCTAGCCCAACAATAACTGGCCTGGTGACTTaGACTTCTGTGGGTCTCATTTTCCTGTCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSASPTITGLVT*TSVGLIFLSSG Trigger: CCCCGAGGACAGGAAAATGAGACCCACAGAAGTTCAAGTCACCAGGCCAGTTATTGTTGGGCTAGCACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547607.1 |
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| CDS GCA 72 bp | TTGACCTTTATACCTTGCTGGTCAGACTGGGTTACATaGCCATCCTCTAAGCCAGAGGCTGAACCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTFIPCWSDWVT*PSSKPEAEPTF Trigger: GAAGGTGGGTTCAGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
||
| CDS GCA 72 bp | CAGATGTGGTCCTGGCTGGAGAGGGAAGAATCCCACTaGCCTTCTCATTTGAGGATCTCAAGGCACATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QMWSWLEREESH*PSHLRISRHIK Trigger: TTTGATGTGCCTTGAGATCCTCAAATGAGAAGGGCAGTGGGATTCTTCCCTCTCCAGCCAGGACCACATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
||
| CDS GCA 72 bp | AACCAATTCACTCAAGGTCACGCAGCTCCTACACAGTaGAGTTGGGATTCGAACCTGCAATGTGGTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NQFTQGHAAPTQ*SWDSNLQCGSQ Trigger: CTGGGAACCACATTGCAGGTTCGAATCCCAACTGCACTGTGTAGGAGCTGCGTGACCTTGAGTGAATTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CCA 72 bp | AGTACACCGTTCTGCAGGCTTAACCAGCAGTATGACTaGGAGACCTCAGGAAACTTACACTCATGGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STPFCRLNQQYD*ETSGNLHSWRK Trigger: CTTCCGCCATGAGTGTAAGTTTCCTGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CCA 72 bp | GCAGTTTGGAGAAATGCAGCGCGGACGCTCAGCGATTaGGCCAGATACATTTCAAACAAGTACACCGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVWRNAARTLSD*ARYISNKYTVL Trigger: CAGAACGGTGTACTTGTTTGAAATGTATCTGGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
||
| CDS CCA 72 bp | ACCCATAAACTCGAGATGGAGCCCGCTTTCCCTCTGTaGATTCCACCCTCCATTACGTCTCTCCCTCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: THKLEMEPAFPL*IPPSITSLPQL Trigger: TAATTGAGGGAGAGACGTAATGGAGGGTGGAATCCACAGAGGGAAAGCGGGCTCCATCTCGAGTTTATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
||
| CDS CAA 72 bp | GGCAGTTTGGAGAAATGCAGCGCGGACGCTCAGCGATaGGGCCAGATACATTTCAAACAAGTACACCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLEKCSADAQR*GQIHFKQVHRS Trigger: AGAACGGTGTACTTGTTTGAAATGTATCTGGCCCAATCGCTGAGCGTCCGCGCTGCATTTCTCCAAACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS CAA 90 bp | GAAGGAGGCCGTGGAGGAGAAAAGAACACAGGAATTTACCAGAAATaGGCAGGCTGTGGAATTGATGGAGTCCACTTACTGTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: EGGRGGEKNTGIYQK*AGCGIDGVHLLSRP Trigger: AGGCCTGGACAGTAAGTGGACTCCATCAATTCCACAGCCTGCCAATTTCTGGTAAATTCCTGTGTTCTTTTCTCCTCCACGGCCTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 72 bp | AACCCTCTTGAGAAACACGCAGGCCTCACAGACTGTTaGGCAAAGTGCACAACCTTTGCTCCAACATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NPLEKHAGLTDC*AKCTTFAPTFP Trigger: TGGGAATGTTGGAGCAAAGGTTGTGCACTTTGCTCAACAGTCTGTGAGGCCTGCGTGTTTCTCAAGAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS TCA 72 bp | AAGGTACTGTTGTTCCCACTTCACAGGGGAGGTGATTaGGGCACAGAAGGGTCAACCAATTCACTCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KVLLFPLHRGGD*GTEGSTNSLKV Trigger: GACCTTGAGTGAATTGGTTGACCCTTCTGTGCCTCAATCACCTCCCCTGTGAAGTGGGAACAACAGTACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 72 bp | CTGGCATTTGGGTCACATGTGGAATCCGTGGTAAACTaGGGCACCTGTCTTCTCCTTCCCAGGTCCAATAAT | + |
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Preference number: 6 (lower is better) Translates to: LAFGSHVESVVN*GTCLLLPRSNN Trigger: ATTATTGGACCTGGGAAGGAGAAGACAGGTGCCTCAGTTTACCACGGATTCCACATGTGACCCAAATGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS GCA 72 bp | TCGAAGATGGGGTTCAGAGCTCTCTCTGAGGGCCCATaGTCTCTAGTTTCCTATTTGCAGGCACACCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SKMGFRALSEGP*SLVSYLQAHLL Trigger: TAAAAGGTGTGCCTGCAAATAGGAAACTAGAGAGCATGGGCCCTCAGAGAGAGCTCTGAACCCCATCTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS GCA 72 bp | AGGCCTCACAGACTGTTGAGCAAAGTGCACAACCTTTaGTCCAACATTCCCACTCTAGAAGCACATCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RPHRLLSKVHNL*SNIPTLEAHPK Trigger: CTTCGGATGTGCTTCTAGAGTGGGAATGTTGGAGCAAAGGTTGTGCACTTTGCTCAACAGTCTGTGAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS GCA 72 bp | AAAGGTGATTTCCTGCCAAATGAAACATTCTCAGGCTaGTATAGGGTCCCCCTGAAACCCTCCCAAACCCTC | + |
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Preference number: 6 (lower is better) Translates to: KGDFLPNETFSG*YRVPLKPSQTL Trigger: GAGGGTTTGGGAGGGTTTCAGGGGGACCCTATAGCAGCCTGAGAATGTTTCATTTGGCAGGAAATCACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS GCA 72 bp | CTTGAACTTCTGTGGGTCTCATTTTCCTGTCCGTTCTaGAGGCTTAACCAGCAGTATGACTGGGAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LELLWVSFSCPF*RLNQQYDWETS Trigger: TGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGACAGGAAAATGAGACCCACAGAAGTTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 72 bp | CAGGCCTCACAGACTGTTGAGCAAAGTGCACAACCTTaGCTCCAACATTCCCACTCTAGAAGCACATCCGAA | + |
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Preference number: 6 (lower is better) Translates to: QASQTVEQSAQP*LQHSHSRSTSE Trigger: TTCGGATGTGCTTCTAGAGTGGGAATGTTGGAGCAAAGGTTGTGCACTTTGCTCAACAGTCTGTGAGGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS TCA 72 bp | AGTCTGCTCCAAGTTCAGTCCACACAGAGCATTCACTaGCACTCCTCAAATCCTCCATCATCTGTGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLQVQSTQSIH*HSSNPPSSVQV Trigger: CACTTGCACAGATGATGGAGGATTTGAGGAGTGTCAGTGAATGCTCTGTGTGGACTGAACTTGGAGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000548368.6 ENST00000654512.1 |
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| CDS TCA 72 bp | TCAAGTGCTAGCCCAACAATAACTGGCCTGGTGACTTaGACTTCTGTGGGTCTCATTTTCCTGTCCGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSASPTITGLVT*TSVGLIFLSVL Trigger: CAGAACGGACAGGAAAATGAGACCCACAGAAGTTCAAGTCACCAGGCCAGTTATTGTTGGGCTAGCACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CCA 72 bp | GCCCATAAATTGACCTTTATACCTTGCTGGTCAGACTaGGTTACATGCCCATCCTCTAAGCCAGAGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: AHKLTFIPCWSD*VTCPSSKPEAE Trigger: TTCAGCCTCTGGCTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS CAA 90 bp | GAGAAAAGAACACAGGAATTTACCAGAAATTGGCAGGCTGTGGAATaGATGGAGTCCACTTACTGTCCAGGCCTAAGGGGTAAGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: EKRTQEFTRNWQAVE*MESTYCPGLRGKET Trigger: CGTCTCCTTACCCCTTAGGCCTGGACAGTAAGTGGACTCCATCAATTCCACAGCCTGCCAATTTCTGGTAAATTCCTGTGTTCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS CAA 90 bp | AGAAACACGCAGGCCTCACAGACTGTTGAGCAAAGTGCACAACCTTaGCTCCAACATTCCCACTCTAGAAGCACATCCGAAGGAAATAAT | + |
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Preference number: 6 (lower is better) Translates to: RNTQASQTVEQSAQP*LQHSHSRSTSEGNN Trigger: ATTATTTCCTTCGGATGTGCTTCTAGAGTGGGAATGTTGGAGCAAAGGTTGTGCACTTTGCTCAACAGTCTGTGAGGCCTGCGTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS GCA 72 bp | ATTGGGCCAGATACATTTCAAACAAGTACACCGTTCTaGAGGCTTAACCAGCAGTATGACTGGGAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: IGPDTFQTSTPF*RLNQQYDWETS Trigger: TGAGGTCTCCCAGTCATACTGCTGGTTAAGCCTGCAGAACGGTGTACTTGTTTGAAATGTATCTGGCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331096.2 ENST00000652865.1 ENST00000658431.1 |
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| CDS GCA 72 bp | AGAAGGGATGTTACATTAGTGAGCAACCACAGTGTCTaGCATAACATTCCCTCCGACTACCTTTCTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRDVTLVSNHSV*HNIPSDYLSLS Trigger: GGAGAGAGAAAGGTAGTCGGAGGGAATGTTATGGCAGACACTGTGGTTGCTCACTAATGTAACATCCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS GCA 72 bp | CTTTCCCAGACTGCCCATAAATTGACCTTTATACCTTaGTGGTCAGACTGGGTTACATGCCCATCCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: LSQTAHKLTFIP*WSDWVTCPSSK Trigger: CTTAGAGGATGGGCATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGCAGTCTGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS GCA 72 bp | TGTCTTCTCCTTCCCAGGTCCAATAATCCCATCCTTTaGCGAAAGCTTTACTGTGGGACTGGCATCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: CLLLPRSNNPIL*RKLYCGTGIIS Trigger: TGAAATGATGCCAGTCCCACAGTAAAGCTTTCGGCAAAGGATGGGATTATTGGACCTGGGAAGGAGAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657482.1 |
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| CDS TCA 72 bp | TCGGGGAAGAAAAACTTTCCCAGACTGCCCATAAATTaGCCTTTATACCTTGCTGGTCAGACTGGGTTACAT | + |
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Preference number: 6 (lower is better) Translates to: SGKKNFPRLPIN*PLYLAGQTGLH Trigger: ATGTAACCCAGTCTGACCAGCAAGGTATAAAGGTCAATTTATGGGCAGTCTGGGAAAGTTTTTCTTCCCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS TCA 72 bp | TGCTCTCTAGTTTCCTATTTGCAGGCACACCTTTTATaGACAGCTTGGTTCTGGGCTAAAAATGCGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CSLVSYLQAHLL*TAWFWAKNAWE Trigger: TTCCCACGCATTTTTAGCCCAGAACCAAGCTGTTCATAAAAGGTGTGCCTGCAAATAGGAAACTAGAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547607.1 ENST00000657482.1 |
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| CDS CCA 72 bp | TTGGGAAGATCACCTAAATGCCCATTAGTGGGGGAATaGTTGAATAAATCCCGAACATCTGTGAGATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LGRSPKCPLVGE*LNKSRTSVRWN Trigger: GTTCCATCTCACAGATGTTCGGGATTTATTCAACCATTCCCCCACTAATGGGCATTTAGGTGATCTTCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS CAA 72 bp | GGAAGATCACCTAAATGCCCATTAGTGGGGGAATGGTaGAATAAATCCCGAACATCTGTGAGATGGAACATT | + |
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Preference number: 6 (lower is better) Translates to: GRSPKCPLVGEW*NKSRTSVRWNI Trigger: AATGTTCCATCTCACAGATGTTCGGGATTTATTCAACCATTCCCCCACTAATGGGCATTTAGGTGATCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666099.1 |
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| CDS CAA 90 bp | GGGCACCGGCAAGATAGTGTCCTAGGAGAAAGTCACTGTCCAATCTaGAGTTTTCTGCCCTTTACAAAATCTTGTATAAAGTCTATTAAA | + |
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Preference number: 6 (lower is better) Translates to: GHRQDSVLGESHCPI*SFLPFTKSCIKSIK Trigger: TTTAATAGACTTTATACAAGATTTTGTAAAGGGCAGAAAACTCAAGATTGGACAGTGACTTTCTCCTAGGACACTATCTTGCCGGTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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| CDS CCA 72 bp | ATGAAGAGTTTAGTAGTCATGACAGAGACATATGGCTaGCAAAACTTAAAATATCTACTATGTGGCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: MKSLVVMTETYG*QNLKYLLCGPR Trigger: CCTTGGGCCACATAGTAGATATTTTAAGTTTTGCCAGCCATATGTCTCTGTCATGACTACTAAACTCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553177.6 |
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