Pregenerated sensors for LINC01394 (Homo sapiens)

Ensembl gene IDs: ENSG00000281809

Ensembl transcript IDs: ENST00000627866.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAGTTTCTGCACTGTATCTGTTCGACGTTATTAAGATGGGTGGGTaGTTAGAAGCACATGCTCTTCCTGTCATTTGCCAACTTACACAC	+
Preference number: 5 (lower is better) Translates to: IVSALYLFDVIKMGG*LEAHALPVICQLTH Trigger: GTGTGTAAGTTGGCAAATGACAGGAAGAGCATGTGCTTCTAATCACCCACCCATCTTAATAACGTCGAACAGATACAGTGCAGAAACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627866.1
CDS CCA 90 bp	AAGGACCTCTTTCAAATTGGCAAGGATTCTGATGTAATGAAATGCTaGTGGTTGTGCAATAGTTTCTGCACTGTATCTGTTCGACGTTAT	+
Preference number: 5 (lower is better) Translates to: KDLFQIGKDSDVMKC*WLCNSFCTVSVRRY Trigger: ATAACGTCGAACAGATACAGTGCAGAAACTATTGCACAACCACCAGCATTTCATTACATCAGAATCCTTGCCAATTTGAAAGAGGTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627866.1
CDS TCA 72 bp	GCACTGTATCTGTTCGACGTTATTAAGATGGGTGGGTaGTTAGAAGCACATGCTCTTCCTGTCATTTGCCAA	+
Preference number: 6 (lower is better) Translates to: ALYLFDVIKMGG*LEAHALPVICQ Trigger: TTGGCAAATGACAGGAAGAGCATGTGCTTCTAATCACCCACCCATCTTAATAACGTCGAACAGATACAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627866.1
CDS CCA 72 bp	TTTCAAATTGGCAAGGATTCTGATGTAATGAAATGCTaGTGGTTGTGCAATAGTTTCTGCACTGTATCTGTT	+
Preference number: 6 (lower is better) Translates to: FQIGKDSDVMKC*WLCNSFCTVSV Trigger: AACAGATACAGTGCAGAAACTATTGCACAACCACCAGCATTTCATTACATCAGAATCCTTGCCAATTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627866.1

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