Pregenerated sensors for LINC01392 (Homo sapiens)
Ensembl gene IDs: ENSG00000233607Ensembl transcript IDs: ENST00000419883.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GACTTATTAGACTCTCCAAAGCAGTTCTCATACACTTTAACAAGATaGAGATATACTAGGAAAGGTAATTGGGTGAGCATTACTAAGTGT | + |
Preference number: 5 (lower is better) Translates to: DLLDSPKQFSYTLTR*RYTRKGNWVSITKC Trigger: ACACTTAGTAATGCTCACCCAATTACCTTTCCTAGTATATCTTCATCTTGTTAAAGTGTATGAGAACTGCTTTGGAGAGTCTAATAAGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419883.1 |
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CDS CCA 72 bp | ATTATCCAGTTGGTTTTACTAAGCATGGTGCTGCAGTaGAAGCTTCGGATTTCCCTTAAGATTGCTTTAACA | + |
Preference number: 6 (lower is better) Translates to: IIQLVLLSMVLQ*KLRISLKIALT Trigger: TGTTAAAGCAATCTTAAGGGAAATCCGAAGCTTCCACTGCAGCACCATGCTTAGTAAAACCAACTGGATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419883.1 |
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CDS TCA 72 bp | GACTCTCCAAAGCAGTTCTCATACACTTTAACAAGATaGAGATATACTAGGAAAGGTAATTGGGTGAGCATT | + |
Preference number: 6 (lower is better) Translates to: DSPKQFSYTLTR*RYTRKGNWVSI Trigger: AATGCTCACCCAATTACCTTTCCTAGTATATCTTCATCTTGTTAAAGTGTATGAGAACTGCTTTGGAGAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419883.1 |