Pregenerated sensors for LINC01374 (Homo sapiens)
Ensembl gene IDs: ENSG00000280560Ensembl transcript IDs: ENST00000629067.1, ENST00000664430.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCAGCTTGGCTCTGCTGACAGTAGACAGGGCAGAACCCCGTGTCTaGGGCCTTGTCTTAGCGGCCGGAAGGGTGCAGAGCCTTGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: LSLALLTVDRAEPRV*GLVLAAGRVQSLES Trigger: CGACTCAAGGCTCTGCACCCTTCCGGCCGCTAAGACAAGGCCTCAGACACGGGGTTCTGCCCTGTCTACTGTCAGCAGAGCCAAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CCA 90 bp | ACTCACGTGGCTGTTGGCAGGAGGCCTCATTTCCTTGCTGGTAATTaGCAAAGACCTCAGTTCCTCATGATGTGGGCCTCTCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: THVAVGRRPHFLAGN*QRPQFLMMWASPHG Trigger: GCCATGTGGAGAGGCCCACATCATGAGGAACTGAGGTCTTTGCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629067.1 |
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| CDS CCA 90 bp | CCAGAAGTGGCTGTTGGCAGGAGGCCTCATTTCCTTGCTGGTAATTaGCAAAGACCTCAGTTCCTCATGATGTGGGCCTCTCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: PEVAVGRRPHFLAGN*QRPQFLMMWASPHG Trigger: GCCATGTGGAGAGGCCCACATCATGAGGAACTGAGGTCTTTGCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS TCA 90 bp | CTTATAAAAGAGATTCCAGAGAGCAGCCTCATTCCTTCCACCATGTaGGGGCACAGCTGGATGGTGCCATCTATGAATCAGGAAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LIKEIPESSLIPSTM*GHSWMVPSMNQEAG Trigger: GCCTGCTTCCTGATTCATAGATGGCACCATCCAGCTGTGCCCTCACATGGTGGAAGGAATGAGGCTGCTCTCTGGAATCTCTTTTATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 90 bp | AAATCCGGGCAGCTGCTGTGTATTGCTGCCCCTCCTCATCACAGCTaGTTAATTGTTTCAACAGAGCAGTTTGCCTGTTTGGGGCTACAA | + |
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Preference number: 5 (lower is better) Translates to: KSGQLLCIAAPPHHS*LIVSTEQFACLGLQ Trigger: TTGTAGCCCCAAACAGGCAAACTGCTCTGTTGAAACAATTAAGCAGCTGTGATGAGGAGGGGCAGCAATACACAGCAGCTGCCCGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 90 bp | CTCTCTGTAACCTCCTTGGAAATCCGGGCAGCTGCTGTGTATTGCTaGCCCTCCTCATCACAGCTGCTTAATTGTTTCAACAGAGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LSVTSLEIRAAAVYC*PSSSQLLNCFNRAV Trigger: AACTGCTCTGTTGAAACAATTAAGCAGCTGTGATGAGGAGGGGCAGCAATACACAGCAGCTGCCCGGATTTCCAAGGAGGTTACAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 90 bp | GAACTCTCTGTAACCTCCTTGGAAATCCGGGCAGCTGCTGTGTATTaGTGCCCCTCCTCATCACAGCTGCTTAATTGTTTCAACAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ELSVTSLEIRAAAVY*CPSSSQLLNCFNRA Trigger: TGCTCTGTTGAAACAATTAAGCAGCTGTGATGAGGAGGGGCAGCAATACACAGCAGCTGCCCGGATTTCCAAGGAGGTTACAGAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CCA 90 bp | ATGATGTGGGCCTCTCCACATGGCTTCCTGAATCTTTTTGTGACATaGCAGCTGGCTTCCTCCAAAGTTAGCAACCTTTTCTCGTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: MMWASPHGFLNLFVT*QLASSKVSNLFSCP Trigger: TGGGCACGAGAAAAGGTTGCTAACTTTGGAGGAAGCCAGCTGCCATGTCACAAAAAGATTCAGGAAGCCATGTGGAGAGGCCCACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000629067.1 ENST00000664430.1 |
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| CDS CCA 90 bp | CAAATCTGTTCACCTCTTGATCTTGGACTTCCAAGCCTCCAGAAGTaGCTGTTGGCAGGAGGCCTCATTTCCTTGCTGGTAATTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QICSPLDLGLPSLQK*LLAGGLISLLVIGK Trigger: TTTGCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGAACAGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CCA 90 bp | ACACTTTTTGGTAGAAGTAACCCACAATTTGCCAGAGTGCATTGTTaGATGCTTAACATTAAAGTTTGTCTTAGTCCATTTTGTGCTACT | + |
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Preference number: 5 (lower is better) Translates to: TLFGRSNPQFARVHC*MLNIKVCLSPFCAT Trigger: AGTAGCACAAAATGGACTAAGACAAACTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTCTACCAAAAAGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 90 bp | AGGATTTCACACTTTTTGGTAGAAGTAACCCACAATTTGCCAGAGTaGATTGTTGGATGCTTAACATTAAAGTTTGTCTTAGTCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: RISHFLVEVTHNLPE*IVGCLTLKFVLVHF Trigger: AAAATGGACTAAGACAAACTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTCTACCAAAAAGTGTGAAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS TCA 72 bp | GCTCTGCTGACAGTAGACAGGGCAGAACCCCGTGTCTaGGGCCTTGTCTTAGCGGCCGGAAGGGTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ALLTVDRAEPRV*GLVLAAGRVQS Trigger: GCTCTGCACCCTTCCGGCCGCTAAGACAAGGCCTCAGACACGGGGTTCTGCCCTGTCTACTGTCAGCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000629067.1 ENST00000664430.1 |
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| CDS CAA 90 bp | GGAAGCAGGCCCCCACCAGACACCAAATCTGTTCACCTCTTGATCTaGGACTTCCAAGCCTCCAGAAGTGGCTGTTGGCAGGAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSRPPPDTKSVHLLI*DFQASRSGCWQEAS Trigger: TGAGGCCTCCTGCCAACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGAACAGATTTGGTGTCTGGTGGGGGCCTGCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS TCA 72 bp | GATTCCCTAGCTCAGACACCTCGCTGTTTCCTAAAGTaGACAGCGCAGCCTCAAGCCTCCCTGCCATTCACT | + |
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Preference number: 6 (lower is better) Translates to: DSLAQTPRCFLK*TAQPQASLPFT Trigger: AGTGAATGGCAGGGAGGCTTGAGGCTGCGCTGTTCACTTTAGGAAACAGCGAGGTGTCTGAGCTAGGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS TCA 72 bp | GCAGGCCCCCACCAGACACCAAATCTGTTCACCTCTTaGTCTTGGACTTCCAAGCCTCCAGAAGTGGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AGPHQTPNLFTS*SWTSKPPEVAV Trigger: AACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGAACAGATTTGGTGTCTGGTGGGGGCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 72 bp | AGCAGGCCCCCACCAGACACCAAATCTGTTCACCTCTaGATCTTGGACTTCCAAGCCTCCAGAAGTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRPPPDTKSVHL*ILDFQASRSGC Trigger: ACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGAACAGATTTGGTGTCTGGTGGGGGCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS TCA 72 bp | GAGATTCCAGAGAGCAGCCTCATTCCTTCCACCATGTaGGGGCACAGCTGGATGGTGCCATCTATGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: EIPESSLIPSTM*GHSWMVPSMNQ Trigger: CTGATTCATAGATGGCACCATCCAGCTGTGCCCTCACATGGTGGAAGGAATGAGGCTGCTCTCTGGAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CCA 72 bp | GCTGTTGGCAGGAGGCCTCATTTCCTTGCTGGTAATTaGCAAAGACCTCAGTTCCTCATGATGTGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AVGRRPHFLAGN*QRPQFLMMWAS Trigger: AGAGGCCCACATCATGAGGAACTGAGGTCTTTGCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000629067.1 ENST00000664430.1 |
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| CDS CCA 72 bp | TCACCTCTTGATCTTGGACTTCCAAGCCTCCAGAAGTaGCTGTTGGCAGGAGGCCTCATTTCCTTGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SPLDLGLPSLQK*LLAGGLISLLV Trigger: TACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 72 bp | AGGGTCCATTTCCAAGGTAGGATACTCACGTGGCTGTaGGCAGGAGGCCTCATTTCCTTGCTGGTAATTGGC | + |
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Preference number: 6 (lower is better) Translates to: RVHFQGRILTWL*AGGLISLLVIG Trigger: GCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACGTGAGTATCCTACCTTGGAAATGGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629067.1 |
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| CDS CAA 72 bp | CTTGATCTTGGACTTCCAAGCCTCCAGAAGTGGCTGTaGGCAGGAGGCCTCATTTCCTTGCTGGTAATTGGC | + |
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Preference number: 6 (lower is better) Translates to: LDLGLPSLQKWL*AGGLISLLVIG Trigger: GCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 90 bp | TGTTCACCTCTTGATCTTGGACTTCCAAGCCTCCAGAAGTGGCTGTaGGCAGGAGGCCTCATTTCCTTGCTGGTAATTGGCAAAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: CSPLDLGLPSLQKWL*AGGLISLLVIGKDL Trigger: GAGGTCTTTGCCAATTACCAGCAAGGAAATGAGGCCTCCTGCCAACAGCCACTTCTGGAGGCTTGGAAGTCCAAGATCAAGAGGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 72 bp | ACCTCCTTGGAAATCCGGGCAGCTGCTGTGTATTGCTaGCCCTCCTCATCACAGCTGCTTAATTGTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: TSLEIRAAAVYC*PSSSQLLNCFN Trigger: GTTGAAACAATTAAGCAGCTGTGATGAGGAGGGGCAGCAATACACAGCAGCTGCCCGGATTTCCAAGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 72 bp | CAGCTGCTGTGTATTGCTGCCCCTCCTCATCACAGCTaGTTAATTGTTTCAACAGAGCAGTTTGCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: QLLCIAAPPHHS*LIVSTEQFACL Trigger: CAAACAGGCAAACTGCTCTGTTGAAACAATTAAGCAGCTGTGATGAGGAGGGGCAGCAATACACAGCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 72 bp | TCACAGTTCTGGAGGATGAGAAATCAAAGATCAAGGTaGCGGCATCTGGTGAAGGCCTTCCAGCTTATAAAA | + |
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Preference number: 6 (lower is better) Translates to: SQFWRMRNQRSR*RHLVKAFQLIK Trigger: TTTTATAAGCTGGAAGGCCTTCACCAGATGCCGGCACCTTGATCTTTGATTTCTCATCCTCCAGAACTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 72 bp | TTCCTCAATGTTTTTGGCTCAGGGTTTCTCCTAAGGTaGCAGTCAAGCCATCAACTGGGGCTGCAGTTATTT | + |
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Preference number: 6 (lower is better) Translates to: FLNVFGSGFLLR*QSSHQLGLQLF Trigger: AAATAACTGCAGCCCCAGTTGATGGCTTGACTGCAACCTTAGGAGAAACCCTGAGCCAAAAACATTGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629067.1 |
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| CDS CAA 90 bp | GAACAGGCCAGGATTTCACACTTTTTGGTAGAAGTAACCCACAATTaGCCAGAGTGCATTGTTGGATGCTTAACATTAAAGTTTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: EQARISHFLVEVTHN*PECIVGCLTLKFVL Trigger: TAAGACAAACTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTCTACCAAAAAGTGTGAAATCCTGGCCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 72 bp | AGCTGCTTAATTGTTTCAACAGAGCAGTTTGCCTGTTaGGGGCTACAAATTAAAAGGTCTTGTTTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SCLIVSTEQFAC*GLQIKRSCFSL Trigger: CAAACTGAAACAAGACCTTTTAATTTGTAGCCCCAAACAGGCAAACTGCTCTGTTGAAACAATTAAGCAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 72 bp | GAAGTAACCCACAATTTGCCAGAGTGCATTGTTGGATaGTTAACATTAAAGTTTGTCTTAGTCCATTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: EVTHNLPECIVG*LTLKFVLVHFV Trigger: CACAAAATGGACTAAGACAAACTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS CAA 72 bp | AGGATTTCACACTTTTTGGTAGAAGTAACCCACAATTaGCCAGAGTGCATTGTTGGATGCTTAACATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RISHFLVEVTHN*PECIVGCLTLK Trigger: CTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTCTACCAAAAAGTGTGAAATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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| CDS GCA 72 bp | CACTTTTTGGTAGAAGTAACCCACAATTTGCCAGAGTaGATTGTTGGATGCTTAACATTAAAGTTTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: HFLVEVTHNLPE*IVGCLTLKFVL Trigger: TAAGACAAACTTTAATGTTAAGCATCCAACAATGCACTCTGGCAAATTGTGGGTTACTTCTACCAAAAAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664430.1 |
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