Pregenerated sensors for LINC01370 (Homo sapiens)
Ensembl gene IDs: ENSG00000237767Ensembl transcript IDs: ENST00000432633.1, ENST00000445606.2, ENST00000656861.1, ENST00000664271.1, ENST00000665038.1, ENST00000667567.1, ENST00000668047.1, ENST00000669216.1, ENST00000669808.1, ENST00000670996.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATCTGTCTGCATGGTGACTCTGCTGGCCTAGAGATCAGAGGTCTCTaGCCCAGGGCACTGTCTCCAGGTCCTGTCCAGACATCCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ICLHGDSAGLEIRGL*PRALSPGPVQTSLS Trigger: GCTCAGGGATGTCTGGACAGGACCTGGAGACAGTGCCCTGGGCCAGAGACCTCTGATCTCTAGGCCAGCAGAGTCACCATGCAGACAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 90 bp | AGTGGGGAAGCACTGGAACAGCCGCACAGCCCCTCACCCGATAAGTaGCAAGAGTCTAATAGCAGGTTATGCTTCTTGGGATTTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGEALEQPHSPSPDK*QESNSRLCFLGFGL Trigger: CAAGCCAAATCCCAAGAAGCATAACCTGCTATTAGACTCTTGTCACTTATCGGGTGAGGGGCTGTGCGGCTGTTCCAGTGCTTCCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 90 bp | ACAGAAAGCATGGCTGGGGGCGCCTCAGGAAACTTTCAATCATGGTaGAAGGAGAAGCAGTCACATCTTGCATGGTCAGAGCAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TESMAGGASGNFQSW*KEKQSHLAWSEQEE Trigger: TTCCTCCTGCTCTGACCATGCAAGATGTGACTGCTTCTCCTTTCACCATGATTGAAAGTTTCCTGAGGCGCCCCCAGCCATGCTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS TCA 90 bp | ATGCTGGCTTCATCAGTCCTCTCCATATGGAACCTTATTTGCTCATaGTTCTGTCATCTGGACTGGGCTCAGCTGGGCGGCTTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: MLASSVLSIWNLICS*FCHLDWAQLGGLSL Trigger: CAGAGACAAGCCGCCCAGCTGAGCCCAGTCCAGATGACAGAATCATGAGCAAATAAGGTTCCATATGGAGAGGACTGATGAAGCCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 90 bp | GGGATTTGGCTTGAGTGGATATTCAACCCTGAAAGTCCTCCAGGCTaGAATAAAAAGCAAGCCAGGCAGGCCAAAACTGGGTGGTCAACA | + |
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Preference number: 5 (lower is better) Translates to: GIWLEWIFNPESPPG*NKKQARQAKTGWST Trigger: TGTTGACCACCCAGTTTTGGCCTGCCTGGCTTGCTTTTTATTCCAGCCTGGAGGACTTTCAGGGTTGAATATCCACTCAAGCCAAATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 90 bp | CAAAGGCAACAGCCATCTAAGGACATGAAGATCTGGCCAAGGATATaGTCATGTGGAAAGGAAGGGGTAGAAAGATGGCCACAGGAATGC | + |
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Preference number: 5 (lower is better) Translates to: QRQQPSKDMKIWPRI*SCGKEGVERWPQEC Trigger: GCATTCCTGTGGCCATCTTTCTACCCCTTCCTTTCCACATGACCATATCCTTGGCCAGATCTTCATGTCCTTAGATGGCTGTTGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 90 bp | TATCGTCAGTGCTGTGATGCCAACTTCCCCTGCAGTGACTATGGGTaGCAGACATTACTGCAGCATGTATTCACATCTACCTGGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: YRQCCDANFPCSDYG*QTLLQHVFTSTWMC Trigger: ACACATCCAGGTAGATGTGAATACATGCTGCAGTAATGTCTGTCACCCATAGTCACTGCAGGGGAAGTTGGCATCACAGCACTGACGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS CCA 90 bp | ATCTGGCCAAGGATATGGTCATGTGGAAAGGAAGGGGTAGAAAGATaGCCACAGGAATGCCAGCTGTTTTGCCTAAGGCTCATAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: IWPRIWSCGKEGVER*PQECQLFCLRLINL Trigger: CAGATTTATGAGCCTTAGGCAAAACAGCTGGCATTCCTGTGGCCATCTTTCTACCCCTTCCTTTCCACATGACCATATCCTTGGCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 90 bp | CTGGACTGTCCTGGCTCTGTGGAAGAAGCTTTCTGTCCTTTCAGCTaGGTAGAAGAAACAAGTAGAAGTGCCTTTAATGTTCTGGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LDCPGSVEEAFCPFS*VEETSRSAFNVLVL Trigger: AAGCACCAGAACATTAAAGGCACTTCTACTTGTTTCTTCTACCCAGCTGAAAGGACAGAAAGCTTCTTCCACAGAGCCAGGACAGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 90 bp | TGCCAATTTACCCAAAGGCAACAGCCATCTAAGGACATGAAGATCTaGCCAAGGATATGGTCATGTGGAAAGGAAGGGGTAGAAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: CQFTQRQQPSKDMKI*PRIWSCGKEGVERW Trigger: CCATCTTTCTACCCCTTCCTTTCCACATGACCATATCCTTGGCCAGATCTTCATGTCCTTAGATGGCTGTTGCCTTTGGGTAAATTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS GCA 90 bp | AACGCAGGAACAGAAAACCAAATACTGCATGTTGTCATTTATAAGTaGGAGCTAAATGATGAGAACACATGGACACACAGAGGGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: NAGTENQILHVVIYK*ELNDENTWTHRGEQ Trigger: TTGTTCCCCTCTGTGTGTCCATGTGTTCTCATCATTTAGCTCGCACTTATAAATGACAACATGCAGTATTTGGTTTTCTGTTCCTGCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445606.2 ENST00000669808.1 |
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| CDS GCA 90 bp | AGGGGTAACCACAAGGCCATGATAAATATGCTCATTTATCTTAATTaGCAATTTACCCAAAGGCAACAGCCATCTAAGGACATGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: RGNHKAMINMLIYLN*QFTQRQQPSKDMKI Trigger: GATCTTCATGTCCTTAGATGGCTGTTGCCTTTGGGTAAATTGGCAATTAAGATAAATGAGCATATTTATCATGGCCTTGTGGTTACCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 90 bp | AATGATTGCATCTCTGCCCTCAGGGTAATGATCACATATGCAATGTaGGATAACAAAATTATCTTCAGGGCAATGATCAGATTCTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: NDCISALRVMITYAM*DNKIIFRAMIRFFC Trigger: GCAAAAGAATCTGATCATTGCCCTGAAGATAATTTTGTTATCTCACATTGCATATGTGATCATTACCCTGAGGGCAGAGATGCAATCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS GCA 90 bp | TGGACATTTGGGTCATTTCCAGTTTTAGGGAGTTATGACTATGGCTaGTATACACATTCTTGTATAGATCTTTTGGAAGACATGTACTCT | + |
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Preference number: 5 (lower is better) Translates to: WTFGSFPVLGSYDYG*YTHSCIDLLEDMYS Trigger: AGAGTACATGTCTTCCAAAAGATCTATACAAGAATGTGTATAGCAGCCATAGTCATAACTCCCTAAAACTGGAAATGACCCAAATGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669808.1 |
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| CDS TCA 90 bp | TGCATTTCTTCAGGAAATGCAATAACAGATCTATCTGTAGTGCAATaGTCCCATCTATTCGTGCAAGTTAATTATCACTTTTCCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: CISSGNAITDLSVVQ*SHLFVQVNYHFSTC Trigger: GCAAGTGGAAAAGTGATAATTAACTTGCACGAATAGATGGGATCATTGCACTACAGATAGATCTGTTATTGCATTTCCTGAAGAAATGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS CCA 90 bp | AAAAACTGCCAATATGCTATTGAGTTATACCCAGGGTTCATCAACTaGGACAAATCTTGGTCTTTGTGTCTGACAAATATTCTATTAGAT | + |
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Preference number: 5 (lower is better) Translates to: KNCQYAIELYPGFIN*DKSWSLCLTNILLD Trigger: ATCTAATAGAATATTTGTCAGACACAAAGACCAAGATTTGTCCCAGTTGATGAACCCTGGGTATAACTCAATAGCATATTGGCAGTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000667567.1 ENST00000669808.1 ENST00000670996.1 |
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| CDS CCA 72 bp | CTTGGCTTGGCCCCAGGGTATGTCACAAGACCCAAGTaGGGAAGCACTGGAACAGCCGCACAGCCCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: LGLAPGYVTRPK*GSTGTAAQPLT Trigger: GGTGAGGGGCTGTGCGGCTGTTCCAGTGCTTCCCCACTTGGGTCTTGTGACATACCCTGGGGCCAAGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | CCCAGGGTATGTCACAAGACCCAAGTGGGGAAGCACTaGAACAGCCGCACAGCCCCTCACCCGATAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PRVCHKTQVGKH*NSRTAPHPISD Trigger: GTCACTTATCGGGTGAGGGGCTGTGCGGCTGTTCCAGTGCTTCCCCACTTGGGTCTTGTGACATACCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | CATGGTGACTCTGCTGGCCTAGAGATCAGAGGTCTCTaGCCCAGGGCACTGTCTCCAGGTCCTGTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: HGDSAGLEIRGL*PRALSPGPVQT Trigger: TGTCTGGACAGGACCTGGAGACAGTGCCCTGGGCCAGAGACCTCTGATCTCTAGGCCAGCAGAGTCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | GGACAGACTGTAGAAGCTAACCTCCAGGGCTTGGCTTaGCCCCAGGGTATGTCACAAGACCCAAGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GQTVEANLQGLA*PQGMSQDPSGE Trigger: TTCCCCACTTGGGTCTTGTGACATACCCTGGGGCCAAGCCAAGCCCTGGAGGTTAGCTTCTACAGTCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | AGAACACATGGACACACAGAGGGGAACAACACACACTaGGACCTTTCAGAGGGTGGAGGATGGGAGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: RTHGHTEGNNTH*DLSEGGGWEEG Trigger: TCCCTCCTCCCATCCTCCACCCTCTGAAAGGTCCCAGTGTGTGTTGTTCCCCTCTGTGTGTCCATGTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669808.1 |
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| CDS CAA 72 bp | GGCGGCTTGTCTCTGCTCCATGTGGCATTAGCTGGATaGACTCATGTGTCTGCAGTCAGTTGGCAGCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: GGLSLLHVALAG*THVSAVSWQLY Trigger: GTAGAGCTGCCAACTGACTGCAGACACATGAGTCAATCCAGCTAATGCCACATGGAGCAGAGACAAGCCGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000445606.2 ENST00000664271.1 ENST00000665038.1 ENST00000667567.1 ENST00000668047.1 ENST00000669216.1 ENST00000669808.1 ENST00000670996.1 |
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| CDS TCA 72 bp | GCACTGGAACAGCCGCACAGCCCCTCACCCGATAAGTaGCAAGAGTCTAATAGCAGGTTATGCTTCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ALEQPHSPSPDK*QESNSRLCFLG Trigger: TCCCAAGAAGCATAACCTGCTATTAGACTCTTGTCACTTATCGGGTGAGGGGCTGTGCGGCTGTTCCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | CTTTCAGTCGAAGGACTACGTTCCCCTGGACTGTCCTaGCTCTGTGGAAGAAGCTTTCTGTCCTTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSVEGLRSPGLS*LCGRSFLSFQL Trigger: CAGCTGAAAGGACAGAAAGCTTCTTCCACAGAGCCAGGACAGTCCAGGGGAACGTAGTCCTTCGACTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 72 bp | TGTCTGCAGTCAGTTGGCAGCTCTACTAGGCCTAGATaGTGCAAGATGGCCTCAATCACAAGTCTGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: CLQSVGSSTRPR*CKMASITSLAP Trigger: AGGTGCCAGACTTGTGATTGAGGCCATCTTGCATCATCTAGGCCTAGTAGAGCTGCCAACTGACTGCAGACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000445606.2 ENST00000664271.1 ENST00000665038.1 ENST00000667567.1 ENST00000669216.1 ENST00000669808.1 |
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| CDS TCA 72 bp | ATGGCTGGGGGCGCCTCAGGAAACTTTCAATCATGGTaGAAGGAGAAGCAGTCACATCTTGCATGGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: MAGGASGNFQSW*KEKQSHLAWSE Trigger: CTCTGACCATGCAAGATGTGACTGCTTCTCCTTTCACCATGATTGAAAGTTTCCTGAGGCGCCCCCAGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS TCA 72 bp | TCATCAGTCCTCTCCATATGGAACCTTATTTGCTCATaGTTCTGTCATCTGGACTGGGCTCAGCTGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSVLSIWNLICS*FCHLDWAQLGG Trigger: GCCGCCCAGCTGAGCCCAGTCCAGATGACAGAATCATGAGCAAATAAGGTTCCATATGGAGAGGACTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | AATTGGCTGACAGTTCCATGGGCTGTACAGAAAGCATaGCTGGGGGCGCCTCAGGAAACTTTCAATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: NWLTVPWAVQKA*LGAPQETFNHG Trigger: ACCATGATTGAAAGTTTCCTGAGGCGCCCCCAGCCATGCTTTCTGTACAGCCCATGGAACTGTCAGCCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS CAA 90 bp | GCTCCATGTGGCATTAGCTGGATTGACTCATGTGTCTGCAGTCAGTaGGCAGCTCTACTAGGCCTAGATGATGCAAGATGGCCTCAATCA | + |
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Preference number: 6 (lower is better) Translates to: APCGISWIDSCVCSQ*AALLGLDDARWPQS Trigger: TGATTGAGGCCATCTTGCATCATCTAGGCCTAGTAGAGCTGCCAACTGACTGCAGACACATGAGTCAATCCAGCTAATGCCACATGGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000445606.2 ENST00000664271.1 ENST00000665038.1 ENST00000667567.1 ENST00000669216.1 ENST00000669808.1 |
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| CDS CCA 72 bp | AGGATATGGTCATGTGGAAAGGAAGGGGTAGAAAGATaGCCACAGGAATGCCAGCTGTTTTGCCTAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RIWSCGKEGVER*PQECQLFCLRL Trigger: GAGCCTTAGGCAAAACAGCTGGCATTCCTGTGGCCATCTTTCTACCCCTTCCTTTCCACATGACCATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CAA 72 bp | GGCATTAGCTGGATTGACTCATGTGTCTGCAGTCAGTaGGCAGCTCTACTAGGCCTAGATGATGCAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: GISWIDSCVCSQ*AALLGLDDARW Trigger: CCATCTTGCATCATCTAGGCCTAGTAGAGCTGCCAACTGACTGCAGACACATGAGTCAATCCAGCTAATGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000445606.2 ENST00000664271.1 ENST00000665038.1 ENST00000667567.1 ENST00000669216.1 ENST00000669808.1 |
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| CDS CAA 72 bp | GGCATTAGCTGGATTGACTCATGTGTCTGCAGTCAGTaGGCAGCTCTACTAGGCCTTTCCTGTAATGATCCC | + |
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Preference number: 6 (lower is better) Translates to: GISWIDSCVCSQ*AALLGLSCNDP Trigger: GGGATCATTACAGGAAAGGCCTAGTAGAGCTGCCAACTGACTGCAGACACATGAGTCAATCCAGCTAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668047.1 ENST00000670996.1 |
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| CDS TCA 72 bp | TGCTGTGATGCCAACTTCCCCTGCAGTGACTATGGGTaGCAGACATTACTGCAGCATGTATTCACATCTACC | + |
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Preference number: 6 (lower is better) Translates to: CCDANFPCSDYG*QTLLQHVFTST Trigger: GGTAGATGTGAATACATGCTGCAGTAATGTCTGTCACCCATAGTCACTGCAGGGGAAGTTGGCATCACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS CCA 72 bp | ACCCAAAGGCAACAGCCATCTAAGGACATGAAGATCTaGCCAAGGATATGGTCATGTGGAAAGGAAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TQRQQPSKDMKI*PRIWSCGKEGV Trigger: TACCCCTTCCTTTCCACATGACCATATCCTTGGCCAGATCTTCATGTCCTTAGATGGCTGTTGCCTTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CAA 90 bp | AAGCCAGGCAGGCCAAAACTGGGTGGTCAACATGACCTAGCCTCTTaGTTAGAAAATAGGAAGCATAGCTTTCAGTCGAAGGACTACGTT | + |
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Preference number: 6 (lower is better) Translates to: KPGRPKLGGQHDLAS*LENRKHSFQSKDYV Trigger: AACGTAGTCCTTCGACTGAAAGCTATGCTTCCTATTTTCTAACAAAGAGGCTAGGTCATGTTGACCACCCAGTTTTGGCCTGCCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS TCA 72 bp | GCCAATTTACCCAAAGGCAACAGCCATCTAAGGACATaGAGATCTGGCCAAGGATATGGTCATGTGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ANLPKGNSHLRT*RSGQGYGHVER Trigger: CCTTTCCACATGACCATATCCTTGGCCAGATCTTCATGTCCTTAGATGGCTGTTGCCTTTGGGTAAATTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS GCA 72 bp | GGAATGATTGCATCTCTTTCTTTAGTCTGTCTCCATTaGTACCATCCTAGTCCAGGCCTTCAGCACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GMIASLSLVCLH*YHPSPGLQHCS Trigger: GGAACAGTGCTGAAGGCCTGGACTAGGATGGTAGCAATGGAGACAGACTAAAGAAAGAGATGCAATCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000667567.1 ENST00000668047.1 ENST00000669216.1 ENST00000669808.1 ENST00000670996.1 |
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| CDS CAA 72 bp | TTTTCTTCTCCTCCCATTGATCTCTGGACCATATCCTaGTCCAGATTCCCCCAGGATCTGAATCCATTAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSSPPIDLWTIS*SRFPQDLNPLA Trigger: TGCTAATGGATTCAGATCCTGGGGGAATCTGGACAAGGATATGGTCCAGAGATCAATGGGAGGAGAAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS CAA 72 bp | GAGTCTAATAGCAGGTTATGCTTCTTGGGATTTGGCTaGAGTGGATATTCAACCCTGAAAGTCCTCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ESNSRLCFLGFG*SGYSTLKVLQA Trigger: AGCCTGGAGGACTTTCAGGGTTGAATATCCACTCAAGCCAAATCCCAAGAAGCATAACCTGCTATTAGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CCA 72 bp | CCTGGCTCTGTGGAAGAAGCTTTCTGTCCTTTCAGCTaGGTAGAAGAAACAAGTAGAAGTGCCTTTAATGTT | + |
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Preference number: 6 (lower is better) Translates to: PGSVEEAFCPFS*VEETSRSAFNV Trigger: AACATTAAAGGCACTTCTACTTGTTTCTTCTACCCAGCTGAAAGGACAGAAAGCTTCTTCCACAGAGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CAA 72 bp | AGGCCAAAACTGGGTGGTCAACATGACCTAGCCTCTTaGTTAGAAAATAGGAAGCATAGCTTTCAGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RPKLGGQHDLAS*LENRKHSFQSK Trigger: CTTCGACTGAAAGCTATGCTTCCTATTTTCTAACAAAGAGGCTAGGTCATGTTGACCACCCAGTTTTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656861.1 ENST00000665038.1 ENST00000668047.1 |
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| CDS CAA 72 bp | CAGGTACTATGTGCTGTTGATTCAACCCCCTTAATGTaGACTGTTATGCTGACCTTTAGTCTGTCTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: QVLCAVDSTPLM*TVMLTFSLSPL Trigger: CAATGGAGACAGACTAAAGGTCAGCATAACAGTCAACATTAAGGGGGTTGAATCAACAGCACATAGTACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432633.1 ENST00000664271.1 |
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| CDS CAA 90 bp | ATTTCCAATCAGGTACTATGTGCTGTTGATTCAACCCCCTTAATGTaGACTGTTATGCTGACCTTTAGTCTGTCTCCATTGCTACCATCC | + |
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Preference number: 6 (lower is better) Translates to: ISNQVLCAVDSTPLM*TVMLTFSLSPLLPS Trigger: GGATGGTAGCAATGGAGACAGACTAAAGGTCAGCATAACAGTCAACATTAAGGGGGTTGAATCAACAGCACATAGTACCTGATTGGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432633.1 ENST00000664271.1 |
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| CDS TCA 72 bp | TGCCAAGCCATAATGATAAGTATTCCTATAGGCCAATaGTTGCATCTCTGCCCTCAGGGTAATGATCACATA | + |
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Preference number: 6 (lower is better) Translates to: CQAIMISIPIGQ*LHLCPQGNDHI Trigger: TATGTGATCATTACCCTGAGGGCAGAGATGCAATCATTGGCCTATAGGAATACTTATCATTATGGCTTGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS GCA 72 bp | CTTTCCTGTAATGATCCCGTCTTCATACGGACCATATaGAAGGGAATGATTGCATCTCTTTTTCTCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSCNDPVFIRTI*KGMIASLFLTV Trigger: TACAGTGAGAAAAAGAGATGCAATCATTCCCTTGCATATGGTCCGTATGAAGACGGGATCATTACAGGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432633.1 |
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| CDS TCA 72 bp | ATGATCCCGTCTTCATACGGACCATATGCAAGGGAATaGTTGCATCTCTTTTTATTCTTAAGCTCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: MIPSSYGPYARE*LHLFLFLSSSS Trigger: AGAGGAAGAGCTTAAGAATAAAAAGAGATGCAATCATTCCCTTGCATATGGTCCGTATGAAGACGGGATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445606.2 |
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| CDS GCA 72 bp | TCCCGTCTTCATACGGACCATATGCAAGGGAATGATTaGATCTCTTTCTGTAACGTAATTATAACAAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SRLHTDHMQGND*ISFCNVIITRL Trigger: TAACCTTGTTATAATTACGTTACAGAAAGAGATGCAATCATTCCCTTGCATATGGTCCGTATGAAGACGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS GCA 72 bp | GGGTCATTTCCAGTTTTAGGGAGTTATGACTATGGCTaGTATACACATTCTTGTATAGATCTTTTGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSFPVLGSYDYG*YTHSCIDLLED Trigger: GTCTTCCAAAAGATCTATACAAGAATGTGTATAGCAGCCATAGTCATAACTCCCTAAAACTGGAAATGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669808.1 |
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| CDS GCA 72 bp | ACAGAAAACCAAATACTGCATGTTGTCATTTATAAGTaGGAGCTAAATGATGAGAACACATGGACACACAGA | + |
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Preference number: 6 (lower is better) Translates to: TENQILHVVIYK*ELNDENTWTHR Trigger: TCTGTGTGTCCATGTGTTCTCATCATTTAGCTCGCACTTATAAATGACAACATGCAGTATTTGGTTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000445606.2 ENST00000669808.1 |
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| CDS GCA 72 bp | TGCAGATGTGCTTCTGCCTCTGTATTAGTCCGTTCATaGACTGATAAATATCTGAAACAGGGTAATTTATTT | + |
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Preference number: 6 (lower is better) Translates to: CRCASASVLVRS*TDKYLKQGNLF Trigger: AAATAAATTACCCTGTTTCAGATATTTATCAGTGCATGAACGGACTAATACAGAGGCAGAAGCACATCTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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| CDS GCA 72 bp | TTATCATACACTTCCGTAATGAATACGCTCCCCCTATaGAAAGGGAACTGCTATTTTAATTTCTGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LSYTSVMNTLPL*KGNCYFNFCHH Trigger: ATGATGACAGAAATTAAAATAGCAGTTCCCTTTGCATAGGGGGAGCGTATTCATTACGGAAGTGTATGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669808.1 |
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| CDS CAA 72 bp | TACCCAGGGTTCATCAACTGGGACAAATCTTGGTCTTaGTGTCTGACAAATATTCTATTAGATCAAACCTTA | + |
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Preference number: 6 (lower is better) Translates to: YPGFINWDKSWS*CLTNILLDQTL Trigger: TAAGGTTTGATCTAATAGAATATTTGTCAGACACAAAGACCAAGATTTGTCCCAGTTGATGAACCCTGGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000667567.1 ENST00000669808.1 ENST00000670996.1 |
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| CDS CAA 90 bp | ATTGAGTTATACCCAGGGTTCATCAACTGGGACAAATCTTGGTCTTaGTGTCTGACAAATATTCTATTAGATCAAACCTTAAAGAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: IELYPGFINWDKSWS*CLTNILLDQTLKSK Trigger: CTTACTCTTTAAGGTTTGATCTAATAGAATATTTGTCAGACACAAAGACCAAGATTTGTCCCAGTTGATGAACCCTGGGTATAACTCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000667567.1 ENST00000669808.1 ENST00000670996.1 |
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| CDS TCA 72 bp | ATGCTTAAGGAGTTTATGTCAGATTTTCTCACGACATaGGGCATCTCACTTCCATTATATTCCCAATACAAT | + |
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Preference number: 6 (lower is better) Translates to: MLKEFMSDFLTT*GISLPLYSQYN Trigger: ATTGTATTGGGAATATAATGGAAGTGAGATGCCTCATGTCGTGAGAAAATCTGACATAAACTCCTTAAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000432633.1 ENST00000445606.2 ENST00000664271.1 ENST00000665038.1 ENST00000667567.1 ENST00000669216.1 ENST00000669808.1 |
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| CDS CAA 72 bp | AAGGGCACAAATCTTAAGTATGGATTCCTAACTTTTTaGTGGACATATATCCTGGTAAACACTCAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KGTNLKYGFLTF*WTYILVNTQVK Trigger: CTTCACTTGAGTGTTTACCAGGATATATGTCCACAAAAAAGTTAGGAATCCATACTTAAGATTTGTGCCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669808.1 |
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| CDS TCA 72 bp | TCAGGAAATGCAATAACAGATCTATCTGTAGTGCAATaGTCCCATCTATTCGTGCAAGTTAATTATCACTTT | + |
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Preference number: 6 (lower is better) Translates to: SGNAITDLSVVQ*SHLFVQVNYHF Trigger: AAAGTGATAATTAACTTGCACGAATAGATGGGATCATTGCACTACAGATAGATCTGTTATTGCATTTCCTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664271.1 |
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