Pregenerated sensors for LINC01366 (Homo sapiens)
Ensembl gene IDs: ENSG00000235172Ensembl transcript IDs: ENST00000436248.4, ENST00000518357.1, ENST00000521471.5, ENST00000653905.1, ENST00000655223.1, ENST00000662473.1, ENST00000662612.1, ENST00000665008.1, ENST00000669914.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGGCCCGACTTCAGTCCTCAGCATCCTCGCCCCTCAAGAGGGCTaGGAAAAGGAACCATGCTCTTCACGAGCCACCATACAGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: AGPTSVLSILAPQEG*EKEPCSSRATIQTW Trigger: CCACGTCTGTATGGTGGCTCGTGAAGAGCATGGTTCCTTTTCTCAGCCCTCTTGAGGGGCGAGGATGCTGAGGACTGAAGTCGGGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521471.5 |
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| CDS TCA 90 bp | TCTGCCTCCCCTCTGAAACTTTCCACTCTGAGCTTAGCGGCCGCCTaGGCCCAACCCCGGCTCAGCACCTCTATGAGTGCAGCACTGTTA | + |
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Preference number: 5 (lower is better) Translates to: SASPLKLSTLSLAAA*AQPRLSTSMSAALL Trigger: TAACAGTGCTGCACTCATAGAGGTGCTGAGCCGGGGTTGGGCTCAGGCGGCCGCTAAGCTCAGAGTGGAAAGTTTCAGAGGGGAGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 90 bp | AGGCGGCCGACTTCAGTCCTCAGCATCCTCGCCCCTCAAGAGGGCTaGGAAAAGGAACCATGCTCTTCACGAGCCACCATACAGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: RRPTSVLSILAPQEG*EKEPCSSRATIQTW Trigger: CCACGTCTGTATGGTGGCTCGTGAAGAGCATGGTTCCTTTTCTCAGCCCTCTTGAGGGGCGAGGATGCTGAGGACTGAAGTCGGCCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662473.1 |
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| CDS TCA 90 bp | GAGAGCAGGCCTTCAGTCCTCAGCATCCTCGCCCCTCAAGAGGGCTaGGAAAAGGAACCATGCTCTTCACGAGCCACCATACAGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: ESRPSVLSILAPQEG*EKEPCSSRATIQTW Trigger: CCACGTCTGTATGGTGGCTCGTGAAGAGCATGGTTCCTTTTCTCAGCCCTCTTGAGGGGCGAGGATGCTGAGGACTGAAGGCCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662612.1 |
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| CDS GCA 90 bp | CTTTCTGAGACGCTGCACCCTCTGCTTTCCACTGTACATTCATGGTaGTGGGCTTGGGGAAGCCAGGGACCAGGACTATGGACTGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LSETLHPLLSTVHSW*WAWGSQGPGLWTEC Trigger: GCACTCAGTCCATAGTCCTGGTCCCTGGCTTCCCCAAGCCCAGCACCATGAATGTACAGTGGAAAGCAGAGGGTGCAGCGTCTCAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CCA 90 bp | TCTGAGACGCTGCACCCTCTGCTTTCCACTGTACATTCATGGTGCTaGGCTTGGGGAAGCCAGGGACCAGGACTATGGACTGAGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SETLHPLLSTVHSWC*AWGSQGPGLWTECF Trigger: GAAGCACTCAGTCCATAGTCCTGGTCCCTGGCTTCCCCAAGCCCAGCACCATGAATGTACAGTGGAAAGCAGAGGGTGCAGCGTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 90 bp | GAACCATGCTCTTCACGAGCCACCATACAGACGTGGGAATTCCCCTaGAGGTCAGAACCACAGCTCCTTCTCAGCAACTCCTTCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: EPCSSRATIQTWEFP*RSEPQLLLSNSFWP Trigger: GGGCCAGAAGGAGTTGCTGAGAAGGAGCTGTGGTTCTGACCTTCAGGGGAATTCCCACGTCTGTATGGTGGCTCGTGAAGAGCATGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000436248.4 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 90 bp | GGGTGGGAAGAGAGGGAGCTTTGGAGCTCCGTAAGCTCCAGGAACTaGAAAACCACAGTCTGCCTCATCTTTCTCCCTGTCCGCGGAACT | + |
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Preference number: 5 (lower is better) Translates to: GWEERELWSSVSSRN*KTTVCLIFLPVRGT Trigger: AGTTCCGCGGACAGGGAGAAAGATGAGGCAGACTGTGGTTTTTCAGTTCCTGGAGCTTACGGAGCTCCAAAGCTCCCTCTCTTCCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS GCA 90 bp | CTTAGCGGCCGCCTGAGCCCAACCCCGGCTCAGCACCTCTATGAGTaGAGCACTGTTATATATCACTGTAATTTTCTCCGGCCTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LSGRLSPTPAQHLYE*STVIYHCNFLRPQK Trigger: TTTCTGAGGCCGGAGAAAATTACAGTGATATATAACAGTGCTGCACTCATAGAGGTGCTGAGCCGGGGTTGGGCTCAGGCGGCCGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 90 bp | CTGAAAAACCACAGTCTGCCTCATCTTTCTCCCTGTCCGCGGAACTaGACTAGCCTCCAAAGCCAAACGGGTTGTTCTGCTGACTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: LKNHSLPHLSPCPRN*TSLQSQTGCSADLA Trigger: AGCTAAGTCAGCAGAACAACCCGTTTGGCTTTGGAGGCTAGTTCAGTTCCGCGGACAGGGAGAAAGATGAGGCAGACTGTGGTTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655223.1 ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 90 bp | CAGTGTCTCAGGTTTCTCTGGTTTGCAGGTTATGGAGCTCACTTGTaGGCTCCAATCCTTGTGAGTGGAAGCATCTTTCTGAGACGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QCLRFLWFAGYGAHL*APILVSGSIFLRRC Trigger: GCAGCGTCTCAGAAAGATGCTTCCACTCACAAGGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAACCAGAGAAACCTGAGACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CCA 90 bp | CCACAGGGTGTTGAACAGATCCCTCTGGTCATGAAAATGGCCCTCTaGCAGCCTCTCAGTGACCTTAGGATTGACAAAGCTGATTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PQGVEQIPLVMKMAL*QPLSDLRIDKADSL Trigger: CAAAGAATCAGCTTTGTCAATCCTAAGGTCACTGAGAGGCTGCCAGAGGGCCATTTTCATGACCAGAGGGATCTGTTCAACACCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000436248.4 ENST00000521471.5 ENST00000653905.1 ENST00000662473.1 ENST00000662612.1 ENST00000669914.1 |
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| CDS CCA 90 bp | GTTTGCAGGTTATGGAGCTCACTTGTGAGCTCCAATCCTTGTGAGTaGAAGCATCTTTCTGAGACGCTGCACCCTCTGCTTTCCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: VCRLWSSLVSSNPCE*KHLSETLHPLLSTV Trigger: TACAGTGGAAAGCAGAGGGTGCAGCGTCTCAGAAAGATGCTTCCACTCACAAGGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 90 bp | TCACTAAAGAGCATTTCCTGTTGCAGAGAGGAGAGCTCGGCCCCCTaGCGGGATAATCACAATAAAGTCTCCGTTGATAAAATGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLKSISCCREESSAP*RDNHNKVSVDKMAK Trigger: CTTGGCCATTTTATCAACGGAGACTTTATTGTGATTATCCCGGCAGGGGGCCGAGCTCTCCTCTCTGCAACAGGAAATGCTCTTTAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 90 bp | TACCCTTGGAGAAATGCTGCATTTTCACTAAAGAGCATTTCCTGTTaGAGAGAGGAGAGCTCGGCCCCCTGCCGGGATAATCACAATAAA | + |
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Preference number: 5 (lower is better) Translates to: YPWRNAAFSLKSISC*REESSAPCRDNHNK Trigger: TTTATTGTGATTATCCCGGCAGGGGGCCGAGCTCTCCTCTCTGCAACAGGAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 90 bp | AGAAACACACAGCTAAGCCTCTCTCCTCATGGTCCTAAATGTAAATaGACACTGTCCCTAGCTGGGAAGGCCAGAATCATAAATTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RNTQLSLSPHGPKCK*TLSLAGKARIINWL Trigger: CAGCCAATTTATGATTCTGGCCTTCCCAGCTAGGGACAGTGTTCATTTACATTTAGGACCATGAGGAGAGAGGCTTAGCTGTGTGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS GCA 90 bp | CATAAGCTAAGCAGGCGTTCAGCTTTGTTACCCTTGGAGAAATGCTaGATTTTCACTAAAGAGCATTTCCTGTTGCAGAGAGGAGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: HKLSRRSALLPLEKC*IFTKEHFLLQRGEL Trigger: GAGCTCTCCTCTCTGCAACAGGAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTAACAAAGCTGAACGCCTGCTTAGCTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 90 bp | GTTCATAAGCTAAGCAGGCGTTCAGCTTTGTTACCCTTGGAGAAATaGTGCATTTTCACTAAAGAGCATTTCCTGTTGCAGAGAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: VHKLSRRSALLPLEK*CIFTKEHFLLQRGE Trigger: CTCTCCTCTCTGCAACAGGAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTAACAAAGCTGAACGCCTGCTTAGCTTATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 90 bp | CTGTCCCTAGCTGGGAAGGCCAGAATCATAAATTGGCTGTGTTTCTaGAAAGCAAAACTTTTTAACCAGAAAGATGTACACTCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: LSLAGKARIINWLCF*KAKLFNQKDVHSLS Trigger: AGATAAAGAGTGTACATCTTTCTGGTTAAAAAGTTTTGCTTTGCAGAAACACAGCCAATTTATGATTCTGGCCTTCCCAGCTAGGGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 72 bp | CCTCTGAAACTTTCCACTCTGAGCTTAGCGGCCGCCTaGGCCCAACCCCGGCTCAGCACCTCTATGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PLKLSTLSLAAA*AQPRLSTSMSA Trigger: TGCACTCATAGAGGTGCTGAGCCGGGGTTGGGCTCAGGCGGCCGCTAAGCTCAGAGTGGAAAGTTTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 72 bp | GGGACCCACAGGGTGTTGAACAGATCCCTCTGGTCATaGAAATGGCCCTCTGGCAGCCTCTCAGTGACCGAC | + |
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Preference number: 6 (lower is better) Translates to: GTHRVLNRSLWS*KWPSGSLSVTD Trigger: GTCGGTCACTGAGAGGCTGCCAGAGGGCCATTTTCATGACCAGAGGGATCTGTTCAACACCCTGTGGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665008.1 |
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| CDS GCA 72 bp | ACGCTGCACCCTCTGCTTTCCACTGTACATTCATGGTaGTGGGCTTGGGGAAGCCAGGGACCAGGACTATGG | + |
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Preference number: 6 (lower is better) Translates to: TLHPLLSTVHSW*WAWGSQGPGLW Trigger: CCATAGTCCTGGTCCCTGGCTTCCCCAAGCCCAGCACCATGAATGTACAGTGGAAAGCAGAGGGTGCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CCA 72 bp | CTGCACCCTCTGCTTTCCACTGTACATTCATGGTGCTaGGCTTGGGGAAGCCAGGGACCAGGACTATGGACT | + |
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Preference number: 6 (lower is better) Translates to: LHPLLSTVHSWC*AWGSQGPGLWT Trigger: AGTCCATAGTCCTGGTCCCTGGCTTCCCCAAGCCCAGCACCATGAATGTACAGTGGAAAGCAGAGGGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 72 bp | GGGACCCACAGGGTGTTGAACAGATCCCTCTGGTCATaGAAATGGCCCTCTGGCAGCCTCTCAGTGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: GTHRVLNRSLWS*KWPSGSLSVTL Trigger: TAAGGTCACTGAGAGGCTGCCAGAGGGCCATTTTCATGACCAGAGGGATCTGTTCAACACCCTGTGGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000436248.4 ENST00000521471.5 ENST00000653905.1 ENST00000662473.1 ENST00000662612.1 ENST00000669914.1 |
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| CDS TCA 72 bp | TCTTCACGAGCCACCATACAGACGTGGGAATTCCCCTaGAGGTCAGAACCACAGCTCCTTCTCAGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRATIQTWEFP*RSEPQLLLSNS Trigger: GGAGTTGCTGAGAAGGAGCTGTGGTTCTGACCTTCAGGGGAATTCCCACGTCTGTATGGTGGCTCGTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 |
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| CDS TCA 72 bp | CACAGTCTGCCTCATCTTTCTCCCTGTCCGCGGAACTaGACTAGCCTCCAAAGCCAAACGGGTTGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: HSLPHLSPCPRN*TSLQSQTGCSA Trigger: AGCAGAACAACCCGTTTGGCTTTGGAGGCTAGTTCAGTTCCGCGGACAGGGAGAAAGATGAGGCAGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655223.1 ENST00000662612.1 ENST00000665008.1 |
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| CDS CAA 72 bp | TGCAGTTGGGCCAGACCACTATTACTTCACCTCCATTaGCCTTCCCTCAATGGCTGGAGAGCCGTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CSWARPLLLHLH*PSLNGWRAVCV Trigger: CACACACACGGCTCTCCAGCCATTGAGGGAAGGCAAATGGAGGTGAAGTAATAGTGGTCTGGCCCAACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653905.1 |
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| CDS TCA 72 bp | GAGAGGGAGCTTTGGAGCTCCGTAAGCTCCAGGAACTaGAAAACCACAGTCTGCCTCATCTTTCTCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ERELWSSVSSRN*KTTVCLIFLPV Trigger: GACAGGGAGAAAGATGAGGCAGACTGTGGTTTTTCAGTTCCTGGAGCTTACGGAGCTCCAAAGCTCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS GCA 72 bp | CGCCTGAGCCCAACCCCGGCTCAGCACCTCTATGAGTaGAGCACTGTTATATATCACTGTAATTTTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RLSPTPAQHLYE*STVIYHCNFLR Trigger: CCGGAGAAAATTACAGTGATATATAACAGTGCTGCACTCATAGAGGTGCTGAGCCGGGGTTGGGCTCAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS CCA 72 bp | GGGGCAGTGTCTCAGGTTTCTCTGGTTTGCAGGTTATaGAGCTCACTTGTGAGCTCCAATCCTTGTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GAVSQVSLVCRL*SSLVSSNPCEW Trigger: CCACTCACAAGGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAACCAGAGAAACCTGAGACACTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 72 bp | AATGGCCAAGGGGCAGTGTCTCAGGTTTCTCTGGTTTaGAGGTTATGGAGCTCACTTGTGAGCTCCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: NGQGAVSQVSLV*RLWSSLVSSNP Trigger: AGGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAACCAGAGAAACCTGAGACACTGCCCCTTGGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 72 bp | AAATGGCCAAGGGGCAGTGTCTCAGGTTTCTCTGGTTaGCAGGTTATGGAGCTCACTTGTGAGCTCCAATCC | + |
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Preference number: 6 (lower is better) Translates to: KWPRGSVSGFSG*QVMELTCELQS Trigger: GGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAACCAGAGAAACCTGAGACACTGCCCCTTGGCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 90 bp | GTACAGTCCACAGTACTGATGATCAAAGCAGTAACAGCAGGGTCTTaGCACCACCTAGGCCAACTGAGGGTTCATAAGCTAAGCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: VQSTVLMIKAVTAGS*HHLGQLRVHKLSRR Trigger: ACGCCTGCTTAGCTTATGAACCCTCAGTTGGCCTAGGTGGTGCAAAGACCCTGCTGTTACTGCTTTGATCATCAGTACTGTGGACTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 72 bp | AGCATTTCCTGTTGCAGAGAGGAGAGCTCGGCCCCCTaGCGGGATAATCACAATAAAGTCTCCGTTGATAAA | + |
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Preference number: 6 (lower is better) Translates to: SISCCREESSAP*RDNHNKVSVDK Trigger: TTTATCAACGGAGACTTTATTGTGATTATCCCGGCAGGGGGCCGAGCTCTCCTCTCTGCAACAGGAAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000436248.4 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS GCA 72 bp | AGAAATGCTGCATTTTCACTAAAGAGCATTTCCTGTTaGAGAGAGGAGAGCTCGGCCCCCTGCCGGGATAAT | + |
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Preference number: 6 (lower is better) Translates to: RNAAFSLKSISC*REESSAPCRDN Trigger: ATTATCCCGGCAGGGGGCCGAGCTCTCCTCTCTGCAACAGGAAATGCTCTTTAGTGAAAATGCAGCATTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 72 bp | CTAATGTCCGGGTCCAGTACAGTGTCTTCTGTGTGCTaGAAGACAGTCGGAGTTTCTCTTCTTCCTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LMSGSSTVSSVC*KTVGVSLLPVV Trigger: AACCACAGGAAGAAGAGAAACTCCGACTGTCTTTCAGCACACAGAAGACACTGTACTGGACCCGGACATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 90 bp | GCAAGAAACAGCCAGATAGGATCTAAATGGGGCAAGGGTGTTGATTaGAGGTTCAGGAGAAGCCTTGTGCCATTTTCCCAACCTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: ARNSQIGSKWGKGVD*RFRRSLVPFSQPHH Trigger: ATGGTGAGGTTGGGAAAATGGCACAAGGCTTCTCCTGAACCTCAAATCAACACCCTTGCCCCATTTAGATCCTATCTGGCTGTTTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 72 bp | AGGTTTCTCTGGTTTGCAGGTTATGGAGCTCACTTGTaGGCTCCAATCCTTGTGAGTGGAAGCATCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RFLWFAGYGAHL*APILVSGSIFL Trigger: CAGAAAGATGCTTCCACTCACAAGGATTGGAGCTCACAAGTGAGCTCCATAACCTGCAAACCAGAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000436248.4 ENST00000518357.1 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 72 bp | CAGCTAAGCCTCTCTCCTCATGGTCCTAAATGTAAATaGACACTGTCCCTAGCTGGGAAGGCCAGAATCATA | + |
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Preference number: 6 (lower is better) Translates to: QLSLSPHGPKCK*TLSLAGKARII Trigger: TATGATTCTGGCCTTCCCAGCTAGGGACAGTGTTCATTTACATTTAGGACCATGAGGAGAGAGGCTTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662612.1 ENST00000665008.1 |
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| CDS CCA 72 bp | GCCGGGATAATCACAATAAAGTCTCCGTTGATAAAATaGCCAAGGGGCAGTGTCTCAGGTTTCTCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AGIITIKSPLIK*PRGSVSGFSGL Trigger: CAAACCAGAGAAACCTGAGACACTGCCCCTTGGCCATTTTATCAACGGAGACTTTATTGTGATTATCCCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000436248.4 ENST00000521471.5 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 72 bp | ACAGTACTGATGATCAAAGCAGTAACAGCAGGGTCTTaGCACCACCTAGGCCAACTGAGGGTTCATAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: TVLMIKAVTAGS*HHLGQLRVHKL Trigger: TAGCTTATGAACCCTCAGTTGGCCTAGGTGGTGCAAAGACCCTGCTGTTACTGCTTTGATCATCAGTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 72 bp | AGCCAGATAGGATCTAAATGGGGCAAGGGTGTTGATTaGAGGTTCAGGAGAAGCCTTGTGCCATTTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SQIGSKWGKGVD*RFRRSLVPFSQ Trigger: TTGGGAAAATGGCACAAGGCTTCTCCTGAACCTCAAATCAACACCCTTGCCCCATTTAGATCCTATCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 90 bp | CACCTAGGCCAACTGAGGGTTCATAAGCTAAGCAGGCGTTCAGCTTaGTTACCCTTGGAGAAATGCTGCATTTTCACTAAAGAGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: HLGQLRVHKLSRRSA*LPLEKCCIFTKEHF Trigger: GAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTAACAAAGCTGAACGCCTGCTTAGCTTATGAACCCTCAGTTGGCCTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 72 bp | AAATGGCCCTCTGGCAGCCTCTCAGTGACCTTAGGATaGACAAAGCTGATTCTTTGTAGCAATAAGACACCA | + |
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Preference number: 6 (lower is better) Translates to: KWPSGSLSVTLG*TKLILCSNKTP Trigger: TGGTGTCTTATTGCTACAAAGAATCAGCTTTGTCAATCCTAAGGTCACTGAGAGGCTGCCAGAGGGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000436248.4 ENST00000521471.5 ENST00000653905.1 ENST00000662473.1 ENST00000662612.1 ENST00000669914.1 |
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| CDS CAA 90 bp | CAACTGAGGGTTCATAAGCTAAGCAGGCGTTCAGCTTTGTTACCCTaGGAGAAATGCTGCATTTTCACTAAAGAGCATTTCCTGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLRVHKLSRRSALLP*EKCCIFTKEHFLLQ Trigger: CTGCAACAGGAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTAACAAAGCTGAACGCCTGCTTAGCTTATGAACCCTCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CCA 72 bp | GTAATATTAGCAAGAAACAGCCAGATAGGATCTAAATaGGGCAAGGGTGTTGATTTGAGGTTCAGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VILARNSQIGSK*GKGVDLRFRRS Trigger: GCTTCTCCTGAACCTCAAATCAACACCCTTGCCCCATTTAGATCCTATCTGGCTGTTTCTTGCTAATATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS CAA 72 bp | GTTCATAAGCTAAGCAGGCGTTCAGCTTTGTTACCCTaGGAGAAATGCTGCATTTTCACTAAAGAGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: VHKLSRRSALLP*EKCCIFTKEHF Trigger: GAAATGCTCTTTAGTGAAAATGCAGCATTTCTCCAAGGGTAACAAAGCTGAACGCCTGCTTAGCTTATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000436248.4 ENST00000653905.1 ENST00000655223.1 ENST00000662473.1 ENST00000662612.1 ENST00000665008.1 ENST00000669914.1 |
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| CDS TCA 72 bp | TGTTCTGCTGACTTAGCTTTGCATGGCGAATGCATTTaGAGCTTCTGTAGGTTTCCAGAAAAATTGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: CSADLALHGECI*SFCRFPEKLCI Trigger: AATGCACAATTTTTCTGGAAACCTACAGAAGCTTCAAATGCATTCGCCATGCAAAGCTAAGTCAGCAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655223.1 ENST00000662612.1 ENST00000665008.1 |
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