Pregenerated sensors for LINC01362 (Homo sapiens)
Ensembl gene IDs: ENSG00000230817Ensembl transcript IDs: ENST00000452901.5, ENST00000659533.1, ENST00000669455.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGCAAAGTCAGTTTCCTGGGAGGGCTCTCTTCCTTTCCTGTAGATaGCAGACTTCTCATGGTGTACCCACATGGCCTCTCTCTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: WQSQFPGRALFLSCR*QTSHGVPTWPLSWS Trigger: GCTCCAAGAGAGAGGCCATGTGGGTACACCATGAGAAGTCTGTCATCTACAGGAAAGGAAGAGAGCCCTCCCAGGAAACTGACTTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659533.1 ENST00000669455.1 |
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| CDS TCA 90 bp | AGAAGAGGCCCCACTTTGCAGCTCTTAGCAGGAGAGTGCACACCATaGGAACAGCTGAGAACAGCGTGTGTGGAAGAACTTGTAAGCACG | + |
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Preference number: 5 (lower is better) Translates to: RRGPTLQLLAGECTP*EQLRTACVEELVST Trigger: CGTGCTTACAAGTTCTTCCACACACGCTGTTCTCAGCTGTTCTCATGGTGTGCACTCTCCTGCTAAGAGCTGCAAAGTGGGGCCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669455.1 |
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| CDS TCA 90 bp | TGGCAAAGTCAGTTTCCTGGGAGGGCTCTCTTCCTTTCCTGTAGATaGCAGACTTCTCATGGTGTACCCACATGGCCTCTCTCACCATCT | + |
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Preference number: 5 (lower is better) Translates to: WQSQFPGRALFLSCR*QTSHGVPTWPLSPS Trigger: AGATGGTGAGAGAGGCCATGTGGGTACACCATGAGAAGTCTGTCATCTACAGGAAAGGAAGAGAGCCCTCCCAGGAAACTGACTTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 90 bp | ACTCCAGGATTCTGGCTACTATTGCTTGTCATGTGTCTGAGGTCTTaGCACTGGCTGTCCGCTGCACACCTTGTTCCTCCTCTGTGTAAT | + |
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Preference number: 5 (lower is better) Translates to: TPGFWLLLLVMCLRS*HWLSAAHLVPPLCN Trigger: ATTACACAGAGGAGGAACAAGGTGTGCAGCGGACAGCCAGTGCCAAGACCTCAGACACATGACAAGCAATAGTAGCCAGAATCCTGGAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CCA 90 bp | AGAAGAAAAGGCAGCTCTTCTCCATGTCTATTCACTCCAGGATTCTaGCTACTATTGCTTGTCATGTGTCTGAGGTCTTGGCACTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RRKGSSSPCLFTPGF*LLLLVMCLRSWHWL Trigger: CAGCCAGTGCCAAGACCTCAGACACATGACAAGCAATAGTAGCCAGAATCCTGGAGTGAATAGACATGGAGAAGAGCTGCCTTTTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS TCA 90 bp | TGCTGGTTTAATGCCATTATCCTCTTTGTATACACCCCCAGCCTATaGAGAAGGAGCCAGTTCTGGAGAATAGACGTTCCAGGTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: CWFNAIILFVYTPSL*RRSQFWRIDVPGQS Trigger: ACTTTGACCTGGAACGTCTATTCTCCAGAACTGGCTCCTTCTTCATAGGCTGGGGGTGTATACAAAGAGGATAATGGCATTAAACCAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS TCA 90 bp | GAACAGCTGAGAACAGCGTGTGTGGAAGAACTTGTAAGCACGCAGTaGGCATCTCTTCAGATCATCACTGAGACACCAGTCTTAATTAAA | + |
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Preference number: 5 (lower is better) Translates to: EQLRTACVEELVSTQ*ASLQIITETPVLIK Trigger: TTTAATTAAGACTGGTGTCTCAGTGATGATCTGAAGAGATGCTCACTGCGTGCTTACAAGTTCTTCCACACACGCTGTTCTCAGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669455.1 |
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| CDS CCA 90 bp | ACCCAGGATTCCAATGTGGAGTCTTCTAACCTTTGGTCCACATTCTaGGCAATAATTCCTCTAGTGATAACAGCAGATCCAGATGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: TQDSNVESSNLWSTF*AIIPLVITADPDGL Trigger: CAAACCATCTGGATCTGCTGTTATCACTAGAGGAATTATTGCCCAGAATGTGGACCAAAGGTTAGAAGACTCCACATTGGAATCCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CCA 90 bp | CACGATGAAGGTCTCCATTTTCATCATCTTCATGTTGAGGAGTTCTaGAGAATAGACGTTCCAGGTCAAAGTCTGGCAAAGTCAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: HDEGLHFHHLHVEEF*RIDVPGQSLAKSVS Trigger: GGAAACTGACTTTGCCAGACTTTGACCTGGAACGTCTATTCTCCAGAACTCCTCAACATGAAGATGATGAAAATGGAGACCTTCATCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669455.1 |
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| CDS TCA 90 bp | CAACCTGAATCCACAGCCCAATGTCTCCAAGTGCCTACTTGTTTCTaGGGTTATTATTTGTTGAGAACACTCCAGAATCACTGTAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: QPESTAQCLQVPTCF*GYYLLRTLQNHCSN Trigger: ATTACTACAGTGATTCTGGAGTGTTCTCAACAAATAATAACCTCAGAAACAAGTAGGCACTTGGAGACATTGGGCTGTGGATTCAGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452901.5 ENST00000659533.1 ENST00000669455.1 |
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| CDS CCA 90 bp | ACTTGCCAAAACATAGAACAACCAAGATGTCCTTCAGTAGGTGAATaGATAAACTTGGTACATCAGGACAGTGAAATATTATTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TCQNIEQPRCPSVGE*INLVHQDSEILFSA Trigger: AGCACTGAATAATATTTCACTGTCCTGATGTACCAAGTTTATCCATTCACCTACTGAAGGACATCTTGGTTGTTCTATGTTTTGGCAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS TCA 72 bp | CAGTTTCCTGGGAGGGCTCTCTTCCTTTCCTGTAGATaGCAGACTTCTCATGGTGTACCCACATGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QFPGRALFLSCR*QTSHGVPTWPL Trigger: GAGAGGCCATGTGGGTACACCATGAGAAGTCTGTCATCTACAGGAAAGGAAGAGAGCCCTCCCAGGAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452901.5 ENST00000659533.1 ENST00000669455.1 |
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| CDS CCA 72 bp | TTCTGGCTACTATTGCTTGTCATGTGTCTGAGGTCTTaGCACTGGCTGTCCGCTGCACACCTTGTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FWLLLLVMCLRS*HWLSAAHLVPP Trigger: AGGAGGAACAAGGTGTGCAGCGGACAGCCAGTGCCAAGACCTCAGACACATGACAAGCAATAGTAGCCAGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS TCA 72 bp | CCCACTTTGCAGCTCTTAGCAGGAGAGTGCACACCATaGGAACAGCTGAGAACAGCGTGTGTGGAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: PTLQLLAGECTP*EQLRTACVEEL Trigger: AAGTTCTTCCACACACGCTGTTCTCAGCTGTTCTCATGGTGTGCACTCTCCTGCTAAGAGCTGCAAAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669455.1 |
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| CDS CCA 72 bp | GGCAGCTCTTCTCCATGTCTATTCACTCCAGGATTCTaGCTACTATTGCTTGTCATGTGTCTGAGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GSSSPCLFTPGF*LLLLVMCLRSW Trigger: CCAAGACCTCAGACACATGACAAGCAATAGTAGCCAGAATCCTGGAGTGAATAGACATGGAGAAGAGCTGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CAA 72 bp | TCTCCATGTCTATTCACTCCAGGATTCTGGCTACTATaGCTTGTCATGTGTCTGAGGTCTTGGCACTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPCLFTPGFWLL*LVMCLRSWHWL Trigger: CAGCCAGTGCCAAGACCTCAGACACATGACAAGCAATAGTAGCCAGAATCCTGGAGTGAATAGACATGGAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CAA 90 bp | CCTGGAGAGCAACACTTCCTTGCTGGTTTAATGCCATTATCCTCTTaGTATACACCCCCAGCCTATGAAGAAGGAGCCAGTTCTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PGEQHFLAGLMPLSS*YTPPAYEEGASSGE Trigger: TTCTCCAGAACTGGCTCCTTCTTCATAGGCTGGGGGTGTATACAAAGAGGATAATGGCATTAAACCAGCAAGGAAGTGTTGCTCTCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 72 bp | TCCTCATTATTTAACGGCGGACCCAGGATTCCAATGTaGAGTCTTCTAACCTTTGGTCCACATTCTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSLFNGGPRIPM*SLLTFGPHSGQ Trigger: TTGCCCAGAATGTGGACCAAAGGTTAGAAGACTCCACATTGGAATCCTGGGTCCGCCGTTAAATAATGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CAA 90 bp | CTTCACTGTCCTCAAGGGATTTATTTCCTCCACGTGACTTGTCAGTaGAGAAGAAAAGGCAGCTCTTCTCCATGTCTATTCACTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LHCPQGIYFLHVTCQ*RRKGSSSPCLFTPG Trigger: TCCTGGAGTGAATAGACATGGAGAAGAGCTGCCTTTTCTTCTCAACTGACAAGTCACGTGGAGGAAATAAATCCCTTGAGGACAGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS TCA 72 bp | AATGCCATTATCCTCTTTGTATACACCCCCAGCCTATaGAGAAGGAGCCAGTTCTGGAGAATAGACGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NAIILFVYTPSL*RRSQFWRIDVP Trigger: TGGAACGTCTATTCTCCAGAACTGGCTCCTTCTTCATAGGCTGGGGGTGTATACAAAGAGGATAATGGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 72 bp | CGGACCCAGGATTCCAATGTGGAGTCTTCTAACCTTTaGTCCACATTCTGGGCAATAATTCCTCTAGTGATA | + |
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Preference number: 6 (lower is better) Translates to: RTQDSNVESSNL*STFWAIIPLVI Trigger: TATCACTAGAGGAATTATTGCCCAGAATGTGGACCAAAGGTTAGAAGACTCCACATTGGAATCCTGGGTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CAA 72 bp | CAACACTTCCTTGCTGGTTTAATGCCATTATCCTCTTaGTATACACCCCCAGCCTATGAAGAAGGAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QHFLAGLMPLSS*YTPPAYEEGAS Trigger: ACTGGCTCCTTCTTCATAGGCTGGGGGTGTATACAAAGAGGATAATGGCATTAAACCAGCAAGGAAGTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 72 bp | TCGTACATTCTATCCTGGAGAGCAACACTTCCTTGCTaGTTTAATGCCATTATCCTCTTTGTATACACCCCC | + |
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Preference number: 6 (lower is better) Translates to: SYILSWRATLPC*FNAIILFVYTP Trigger: GGGGGTGTATACAAAGAGGATAATGGCATTAAACCAGCAAGGAAGTGTTGCTCTCCAGGATAGAATGTACGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 72 bp | GGTCTCCATTTTCATCATCTTCATGTTGAGGAGTTCTaGAGAATAGACGTTCCAGGTCAAAGTCTGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLHFHHLHVEEF*RIDVPGQSLAK Trigger: CTTTGCCAGACTTTGACCTGGAACGTCTATTCTCCAGAACTCCTCAACATGAAGATGATGAAAATGGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669455.1 |
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| CDS CCA 72 bp | TCCAATGTGGAGTCTTCTAACCTTTGGTCCACATTCTaGGCAATAATTCCTCTAGTGATAACAGCAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SNVESSNLWSTF*AIIPLVITADP Trigger: TGGATCTGCTGTTATCACTAGAGGAATTATTGCCCAGAATGTGGACCAAAGGTTAGAAGACTCCACATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS TCA 72 bp | GGTCTCCATTTTCATCATCTTCATGTTGAGGCTCCATaGGTCTCAGTTTCTCATCTACTAATCGTACATTCT | + |
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Preference number: 6 (lower is better) Translates to: GLHFHHLHVEAP*VSVSHLLIVHS Trigger: AGAATGTACGATTAGTAGATGAGAAACTGAGACTCATGGAGCCTCAACATGAAGATGATGAAAATGGAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CAA 90 bp | CAGTGCTCTACTAATTGTGTTCCTATGGGCTTCTTGCTTAATCTTTaGGAGTTTCCATTTCTCTATGAGGTAGTGCTTGTTCCTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: QCSTNCVPMGFLLNL*EFPFLYEVVLVPHY Trigger: ATAATGAGGAACAAGCACTACCTCATAGAGAAATGGAAACTCCAAAAGATTAAGCAAGAAGCCCATAGGAACACAATTAGTAGAGCACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS TCA 72 bp | GTAAGCTGCCATGGCTTATTCATCATGCTTAGGATATaGACTTGTTTCAACTTTTTGTCCAAGCTCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VSCHGLFIMLRI*TCFNFLSKLSD Trigger: ATCAGAGAGCTTGGACAAAAAGTTGAAACAAGTTCATATCCTAAGCATGATGAATAAGCCATGGCAGCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000452901.5 ENST00000659533.1 |
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| CDS CAA 72 bp | ACTAATTGTGTTCCTATGGGCTTCTTGCTTAATCTTTaGGAGTTTCCATTTCTCTATGAGGTAGTGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: TNCVPMGFLLNL*EFPFLYEVVLV Trigger: AACAAGCACTACCTCATAGAGAAATGGAAACTCCAAAAGATTAAGCAAGAAGCCCATAGGAACACAATTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS TCA 72 bp | AGTCCTTCAGATAGAATATGCCTTGACTGGAAGGAATaGCTCAACCGGAACAATTTTAAACCTCATTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: SPSDRICLDWKE*LNRNNFKPHLN Trigger: ATTTAAATGAGGTTTAAAATTGTTCCGGTTGAGTCATTCCTTCCAGTCAAGGCATATTCTATCTGAAGGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS TCA 72 bp | AATCATCACTTTATAAATGATGAGGGTAAGATCTTATaGGGTAGTGCTTGTTCCTCATTATTTAACGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: NHHFINDEGKIL*GSACSSLFNGG Trigger: TCCGCCGTTAAATAATGAGGAACAAGCACTACCTCATAAGATCTTACCCTCATCATTTATAAAGTGATGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659533.1 |
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| CDS CCA 72 bp | AACATAGAACAACCAAGATGTCCTTCAGTAGGTGAATaGATAAACTTGGTACATCAGGACAGTGAAATATTA | + |
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Preference number: 6 (lower is better) Translates to: NIEQPRCPSVGE*INLVHQDSEIL Trigger: TAATATTTCACTGTCCTGATGTACCAAGTTTATCCATTCACCTACTGAAGGACATCTTGGTTGTTCTATGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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| CDS CCA 72 bp | GAAATATTATTCAGTGCTCTACTAATTGTGTTCCTATaGGCTTCTTGCTTAATCTTTTGGAGTTTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: EILFSALLIVFL*ASCLIFWSFHF Trigger: GAAATGGAAACTCCAAAAGATTAAGCAAGAAGCCCATAGGAACACAATTAGTAGAGCACTGAATAATATTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452901.5 |
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