Pregenerated sensors for LINC01359 (Homo sapiens)
Ensembl gene IDs: ENSG00000226891Ensembl transcript IDs: ENST00000415842.5, ENST00000436350.2, ENST00000444349.6, ENST00000447748.5, ENST00000634604.2, ENST00000634775.1, ENST00000634799.1, ENST00000635398.1, ENST00000635626.1, ENST00000647968.1, ENST00000654678.1, ENST00000654680.1, ENST00000654707.1, ENST00000658189.1, ENST00000658816.1, ENST00000663993.1, ENST00000664673.1, ENST00000666562.1, ENST00000668343.1, ENST00000669029.1, ENST00000670320.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCAGGATGATGCCTCTAAGTCTTCCTGCAGCCTTGCAATGGTCCTaGAGACAGCAGCCCATACTGTCGGCATGGGAGTGGGGTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRMMPLSLPAALQWS*RQQPILSAWEWGPW Trigger: CCAGGGACCCCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGGCTGCAGGAAGACTTAGAGGCATCATCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS TCA 90 bp | CTTGTGAAATGTGAACCGAACCGTGAAGGACACTTGCAATGGTCCTaGAGACAGCAGCCCATACTGTCGGCATGGGAGTGGGGTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVKCEPNREGHLQWS*RQQPILSAWEWGPW Trigger: CCAGGGACCCCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGTGTCCTTCACGGTTCGGTTCACATTTCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000444349.6 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000654680.1 ENST00000658189.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS GCA 90 bp | CTTGGCAACCAGAAGCCAAGGCAGGATGATGCCTCTAAGTCTTCCTaGAGCCTTGCAATGGTCCTGAAGACAGCAGCCCATACTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGNQKPRQDDASKSS*SLAMVLKTAAHTVG Trigger: GCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGGCTGCAGGAAGACTTAGAGGCATCATCCTGCCTTGGCTTCTGGTTGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS CCA 90 bp | GCTGGAAGTCCAAGATCAAGATGCTGGCAGGGTTGGTTTCCTCTGTaGCCTCTTTCCTTGGCTTGTAGATTGCTGCTCTCTTGCTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSPRSRCWQGWFPL*PLSLACRLLLSCYL Trigger: GAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCTGCCAGCATCTTGATCTTGGACTTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000415842.5 ENST00000444349.6 ENST00000447748.5 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS CCA 90 bp | TGGCTCTGTCCTCTCCTGTGTGCCATGGACGTCTCTCCCCTTCTCTaGGTATTGATTTTCCCTGCTGTAGAGAGGATAACACCTACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLCPLLCAMDVSPLL*VLIFPAVERITPTS Trigger: TGAGGTAGGTGTTATCCTCTCTACAGCAGGGAAAATCAATACCCAGAGAAGGGGAGAGACGTCCATGGCACACAGGAGAGGACAGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||
| CDS GCA 90 bp | GGCAGGGTTGGTTTCCTCTGTGGCCTCTTTCCTTGGCTTGTAGATTaGTGCTCTCTTGCTACCTCTTCACATGGTCGTACTTCTGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRVGFLCGLFPWLVD*CSLATSSHGRTSVH Trigger: ATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000415842.5 ENST00000444349.6 ENST00000447748.5 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS CCA 90 bp | GATCAAGATGCTGGCAGGGTTGGTTTCCTCTGTGGCCTCTTTCCTTaGCTTGTAGATTGCTGCTCTCTTGCTACCTCTTCACATGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: DQDAGRVGFLCGLFP*LVDCCSLATSSHGR Trigger: ACGACCATGTGAAGAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCTGCCAGCATCTTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000415842.5 ENST00000444349.6 ENST00000447748.5 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS GCA 90 bp | AGGGTTGGTTTCCTCTGTGGCCTCTTTCCTTGGCTTGTAGATTGCTaGTCTCTTGCTACCTCTTCACATGGTCGTACTTCTGTGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVGFLCGLFPWLVDC*SLATSSHGRTSVHA Trigger: TGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000415842.5 ENST00000444349.6 ENST00000447748.5 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS GCA 90 bp | AGGGAGGGGAAGCAGAAGAAAGCGAGGAAAGCCTCCAGATCATGCTaGAGCTCTGACATTCAGTACAAGTATGTGCCAAGCACTGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: REGKQKKARKASRSC*SSDIQYKYVPSTVL Trigger: TAACACAGTGCTTGGCACATACTTGTACTGAATGTCAGAGCTGCAGCATGATCTGGAGGCTTTCCTCGCTTTCTTCTGCTTCCCCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000658189.1 ENST00000666562.1 |
||
| CDS TCA 90 bp | TCTACATGTGCCTTCAAGGGAAAAGCATGGCTAGTTGGTGACTGCTaGCAAAGTTGGTATCAGGCAGAACACCTTGGCAACCAGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: STCAFKGKAWLVGDC*QSWYQAEHLGNQKP Trigger: TGGCTTCTGGTTGCCAAGGTGTTCTGCCTGATACCAACTTTGTCAGCAGTCACCAACTAGCCATGCTTTTCCCTTGAAGGCACATGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS TCA 90 bp | TCATCACAGCTGATTCCTAAGCTCAGTGAAAGCCTGGCTAAGTGTTaGAGGAGGGCCCCAGTACACGCCCAATTGGCAAAAACTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQLIPKLSESLAKC*RRAPVHAQLAKTEK Trigger: TTTCTCAGTTTTTGCCAATTGGGCGTGTACTGGGGCCCTCCTTCAACACTTAGCCAGGCTTTCACTGAGCTTAGGAATCAGCTGTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635398.1 ENST00000635626.1 |
||
| CDS GCA 90 bp | GGCAGGGTTGGTTTCCTCTGTGGCCTCTTTCCTTGGCTTGTAGATTaGTGCTCTCTTGCTACCTCTTCACATGGTCGTACTTCTAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: GRVGFLCGLFPWLVD*CSLATSSHGRTSNL Trigger: TAAGTTAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654678.1 |
||
| CDS TCA 90 bp | GTCCTCTCCTGTGTGCCATGGACGTCTCTCCCCTTCTCTGGGTATTaGTTTTCCCTGCTAACTTATTATAGAACATCCATGAACCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLSCVPWTSLPFSGY*FSLLTYYRTSMNRQ Trigger: TTGGCGGTTCATGGATGTTCTATAATAAGTTAGCAGGGAAAATCAATACCCAGAGAAGGGGAGAGACGTCCATGGCACACAGGAGAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634799.1 ENST00000647968.1 |
||
| CDS CCA 90 bp | TGCTTGAATCATCATAAGGTAGAAGAACAAGGCAGTTCTGGAAGCTaGAAGTCCAAGATCAAGATGCTGGCAGGGTTGGTTTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLNHHKVEEQGSSGS*KSKIKMLAGLVSSV Trigger: CACAGAGGAAACCAACCCTGCCAGCATCTTGATCTTGGACTTCCAGCTTCCAGAACTGCCTTGTTCTTCTACCTTATGATGATTCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000669029.1 |
||
| CDS GCA 90 bp | AGGGTTGGTTTCCTCTGTGGCCTCTTTCCTTGGCTTGTAGATTGCTaGTCTCTTGCTACCTCTTCACATGGTCGTACTTCTAACTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: RVGFLCGLFPWLVDC*SLATSSHGRTSNLL Trigger: TAATAAGTTAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGCAGCAATCTACAAGCCAAGGAAAGAGGCCACAGAGGAAACCAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654678.1 |
||
| CDS TCA 90 bp | TTCTCTAAGGCTGGATCTGAACAGAAGTGCAAAGGGCATGACATTTaGAGAATTGTTTGCCTGGTGTGGATGGTTAGGCAATCTACATGT | + |
|
Preference number: 5 (lower is better) Translates to: FSKAGSEQKCKGHDI*RIVCLVWMVRQSTC Trigger: ACATGTAGATTGCCTAACCATCCACACCAGGCAAACAATTCTTCAAATGTCATGCCCTTTGCACTTCTGTTCAGATCCAGCCTTAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS TCA 90 bp | TCTTGCTACCTCTTCACATGGTCGTACTTCTGTGCATGCACACTGTaGTATTTCTTCTTCCAGAATCCAGCAGGATTGTACCTTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SCYLFTWSYFCACTL*YFFFQNPAGLYLES Trigger: AGATTCAAGGTACAATCCTGCTGGATTCTGGAAGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658189.1 |
||
| CDS TCA 90 bp | TCTTGCTACCTCTTCACATGGTCGTACTTCTGTGCATGCACACTGTaGTATTTCTTCCAGAATCCAGCAGGATTGTACCTTGAATCTATA | + |
|
Preference number: 5 (lower is better) Translates to: SCYLFTWSYFCACTL*YFFQNPAGLYLESI Trigger: TATAGATTCAAGGTACAATCCTGCTGGATTCTGGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415842.5 ENST00000668343.1 |
||
| CDS GCA 90 bp | GTGAGAATGCAGAACATAATCTCTTCTTGTACTACTCTACAGACCTaGCCACACATCAAGGGAAAAGGGAACGCTCATTGTTCTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRMQNIISSCTTLQT*PHIKGKGNAHCSFV Trigger: AACAAAAGAACAATGAGCGTTCCCTTTTCCCTTGATGTGTGGGCAGGTCTGTAGAGTAGTACAAGAAGAGATTATGTTCTGCATTCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||
| CDS TCA 90 bp | TCTGTGCATGCACACTGTGATATTTCTTTTATTATAGAACATCCATaGACCGCCAAAGGTCTTCTCCTCTCCATGAAATTTTGTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVHAHCDISFIIEHP*TAKGLLLSMKFCPV Trigger: CACTGGACAAAATTTCATGGAGAGGAGAAGACCTTTGGCGGTTCATGGATGTTCTATAATAAAAGAAATATCACAGTGTGCATGCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634775.1 ENST00000658816.1 |
||
| CDS TCA 90 bp | TTCAAAATCCATTCAGTTTTACAGGAATATCAGATTGCTCTGGGCTaGCTTACTAGCCGTAATAACAAGGCTTATTCTACTCCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FKIHSVLQEYQIALG*LTSRNNKAYSTPGI Trigger: AATCCCAGGAGTAGAATAAGCCTTGTTATTACGGCTAGTAAGTCAGCCCAGAGCAATCTGATATTCCTGTAAAACTGAATGGATTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654680.1 |
||
| CDS TCA 90 bp | TTTGTCTACAGTCCTGTAATCCCAGAATCCAGCAGGATTGTACCTTaGATCTATATAAGCAACCAAATTCTCCTCGTGTTGTCTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: FVYSPVIPESSRIVP*IYISNQILLVLSLF Trigger: AAATAAAGACAACACGAGGAGAATTTGGTTGCTTATATAGATTCAAGGTACAATCCTGCTGGATTCTGGGATTACAGGACTGTAGACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000436350.2 ENST00000444349.6 ENST00000634604.2 ENST00000634775.1 ENST00000634799.1 ENST00000647968.1 ENST00000654678.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000669029.1 ENST00000670320.1 |
||
| CDS TCA 90 bp | ATCCTGAAGCTTAAAGGTATTATTGGTGGACCAGGACTTTCTTGTTaGAGTGAGAATGCAGAACATAATCTCTTCTTGTACTACTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: ILKLKGIIGGPGLSC*SENAEHNLFLYYST Trigger: TGTAGAGTAGTACAAGAAGAGATTATGTTCTGCATTCTCACTTCAACAAGAAAGTCCTGGTCCACCAATAATACCTTTAAGCTTCAGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||
| CDS CCA 90 bp | TTTACTTCAAAATCCATTCAGTTTTACAGGAATATCAGATTGCTCTaGGCTGACTTACTAGCCGTAATAACAAGGCTTATTCTACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTSKSIQFYRNIRLL*ADLLAVITRLILLL Trigger: CAGGAGTAGAATAAGCCTTGTTATTACGGCTAGTAAGTCAGCCCAGAGCAATCTGATATTCCTGTAAAACTGAATGGATTTTGAAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654680.1 |
||
| CDS TCA 90 bp | ATGCACACTGTGATATTTCTTCCAGAATCCAGCAGGATTGTACCTTaGATCTATATAAGCAACCAAATTCTCCTCGTGTTGTCTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: MHTVIFLPESSRIVP*IYISNQILLVLSLF Trigger: AAATAAAGACAACACGAGGAGAATTTGGTTGCTTATATAGATTCAAGGTACAATCCTGCTGGATTCTGGAAGAAATATCACAGTGTGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415842.5 ENST00000668343.1 |
||
| CDS TCA 90 bp | CACACTGTGATATTTCTTCTTCCAGAATCCAGCAGGATTGTACCTTaGATCTATATAAGCAACCAAATTCTCCTCGTGTTGTCTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: HTVIFLLPESSRIVP*IYISNQILLVLSLF Trigger: AAATAAAGACAACACGAGGAGAATTTGGTTGCTTATATAGATTCAAGGTACAATCCTGCTGGATTCTGGAAGAAGAAATATCACAGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658189.1 |
||
| CDS GCA 72 bp | TGCGCAGGTCTCCTGTCCAGTGTTAAGGAGCGTGAGTaGCCTGATGTCCCCAGGAGTGCTGGTCGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAGLLSSVKERE*PDVPRSAGRCS Trigger: TGAGCAGCGACCAGCACTCCTGGGGACATCAGGGCACTCACGCTCCTTAACACTGGACAGGAGACCTGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000647968.1 ENST00000664673.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS CCA 72 bp | GCCCTGATGTCCCCAGGAGTGCTGGTCGCTGCTCACTaGAGTGAAAGCCATTTAGTGGCTGATCCAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALMSPGVLVAAH*SESHLVADPRE Trigger: TTCCCTTGGATCAGCCACTAAATGGCTTTCACTCCAGTGAGCAGCGACCAGCACTCCTGGGGACATCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000647968.1 ENST00000664673.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS TCA 72 bp | ATGCCTCTAAGTCTTCCTGCAGCCTTGCAATGGTCCTaGAGACAGCAGCCCATACTGTCGGCATGGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MPLSLPAALQWS*RQQPILSAWEW Trigger: CCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGGCTGCAGGAAGACTTAGAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS TCA 72 bp | TGTGAACCGAACCGTGAAGGACACTTGCAATGGTCCTaGAGACAGCAGCCCATACTGTCGGCATGGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CEPNREGHLQWS*RQQPILSAWEW Trigger: CCACTCCCATGCCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGTGTCCTTCACGGTTCGGTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000444349.6 ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000654680.1 ENST00000658189.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000668343.1 ENST00000669029.1 |
||
| CDS GCA 72 bp | CAGAAGCCAAGGCAGGATGATGCCTCTAAGTCTTCCTaGAGCCTTGCAATGGTCCTGAAGACAGCAGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QKPRQDDASKSS*SLAMVLKTAAH Trigger: ATGGGCTGCTGTCTTCAGGACCATTGCAAGGCTGCAGGAAGACTTAGAGGCATCATCCTGCCTTGGCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS GCA 72 bp | GGAAAGCCTCCAGATCATGCTGCAGCTCTGACATCTTaGAATGGTCCTGAAGACAGCAGCCCATACTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GKPPDHAAALTS*NGPEDSSPYCR Trigger: CCGACAGTATGGGCTGCTGTCTTCAGGACCATTGCAAGATGTCAGAGCTGCAGCATGATCTGGAGGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000447748.5 ENST00000635398.1 ENST00000635626.1 |
||
| CDS TCA 72 bp | AAGCTGACTGTTCCCCAAGTGTCAGGCCACAAAGACTaGGTCTCCTTAAAAGATTTAGGCCAGGCGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KLTVPQVSGHKD*VSLKDLGQARW Trigger: CCACCGCGCCTGGCCTAAATCTTTTAAGGAGACTCAGTCTTTGTGGCCTGACACTTGGGGAACAGTCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000447748.5 ENST00000654680.1 |
||
| CDS CAA 90 bp | ATGGTAGTGGTTAAGAGTTGGGGCACTGGTGTCCTATATTCATTCTaGGCTCTGTCCTCTCCTGTGTGCCATGGACGTCTCTCCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MVVVKSWGTGVLYSF*ALSSPVCHGRLSPS Trigger: AGAAGGGGAGAGACGTCCATGGCACACAGGAGAGGACAGAGCCAAGAATGAATATAGGACACCAGTGCCCCAACTCTTAACCACTACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000436350.2 ENST00000634799.1 ENST00000647968.1 ENST00000670320.1 |
||
| CDS TCA 72 bp | GTGAACCGAACCGTGAAGGACACTTATCCCAGGCTGTaGGTTTATGGACAGCAGGAACCAAGCAGTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VNRTVKDTYPRL*VYGQQEPSSHP Trigger: AGGATGACTGCTTGGTTCCTGCTGTCCATAAACTCACAGCCTGGGATAAGTGTCCTTCACGGTTCGGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415842.5 ENST00000654707.1 |
||
| CDS GCA 72 bp | AGAAGCACCTGTGAATGCAGGGAATTTAGCCAGCCATaGATGTGCCCAGGGCAAGATGCTTGCTCAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSTCECREFSQP*MCPGQDACSEK Trigger: CTTTTCTGAGCAAGCATCTTGCCCTGGGCACATGCATGGCTGGCTAAATTCCCTGCATTCACAGGTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635398.1 ENST00000635626.1 |
||
| CDS CCA 72 bp | GGTTCTAGAGGGAGCAAAGCAGACAGTTCTGGAAGCTaGAAGTCCAAGATCAAGATGCTGGCAGGGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSRGSKADSSGS*KSKIKMLAGLV Trigger: AACCAACCCTGCCAGCATCTTGATCTTGGACTTCCAGCTTCCAGAACTGTCTGCTTTGCTCCCTCTAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444349.6 |
||
| CDS CAA 72 bp | GTGACTGCTGACAAAGTTGGTATCAGGCAGAACACCTaGGCAACCAGAAGCCAAGGCAGGATGATGCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: VTADKVGIRQNT*ATRSQGRMMPL Trigger: TAGAGGCATCATCCTGCCTTGGCTTCTGGTTGCCAAGGTGTTCTGCCTGATACCAACTTTGTCAGCAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS CAA 72 bp | CTGTGTGCCATGGACGTCTCTCCCCTTCTCTGGGTATaGATTTTCCCTGCTGTAGAGAGGATAACACCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LCAMDVSPLLWV*IFPAVERITPT Trigger: GGTAGGTGTTATCCTCTCTACAGCAGGGAAAATCAATACCCAGAGAAGGGGAGAGACGTCCATGGCACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||
| CDS CAA 72 bp | GTTAAGAGTTGGGGCACTGGTGTCCTATATTCATTCTaGGCTCTGTCCTCTCCTGTGTGCCATGGACGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKSWGTGVLYSF*ALSSPVCHGRL Trigger: GAGACGTCCATGGCACACAGGAGAGGACAGAGCCAAGAATGAATATAGGACACCAGTGCCCCAACTCTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000436350.2 ENST00000634799.1 ENST00000647968.1 ENST00000670320.1 |
||
| CDS CAA 72 bp | ACTGTCGGCATGGGAGTGGGGTCCCTGGTTCTCTGTTaGCCTAACTCTGAACTAACCCAGATTGGAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVGMGVGSLVLC*PNSELTQIGKA Trigger: TGCTTTTCCAATCTGGGTTAGTTCAGAGTTAGGCAAACAGAGAACCAGGGACCCCACTCCCATGCCGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654680.1 ENST00000658189.1 ENST00000658816.1 ENST00000669029.1 |
||
| CDS TCA 72 bp | GCCTTCAAGGGAAAAGCATGGCTAGTTGGTGACTGCTaGCAAAGTTGGTATCAGGCAGAACACCTTGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AFKGKAWLVGDC*QSWYQAEHLGN Trigger: GTTGCCAAGGTGTTCTGCCTGATACCAACTTTGTCAGCAGTCACCAACTAGCCATGCTTTTCCCTTGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS TCA 72 bp | CTCTTCACATGGTCGTACTTCTGTGCATGCACACTGTaGTATTTCTTCATGGTGGCAGGTGCCTGTAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LFTWSYFCACTL*YFFMVAGACSP Trigger: GGGACTACAGGCACCTGCCACCATGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634604.2 ENST00000663993.1 |
||
| CDS GCA 72 bp | GGGAAGCAGAAGAAAGCGAGGAAAGCCTCCAGATCATaGTGCAGCTCTGACATTCAGTACAAGTATGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKQKKARKASRS*CSSDIQYKYVP Trigger: TGGCACATACTTGTACTGAATGTCAGAGCTGCAGCATGATCTGGAGGCTTTCCTCGCTTTCTTCTGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000634604.2 ENST00000634775.1 ENST00000647968.1 ENST00000654678.1 ENST00000658189.1 ENST00000666562.1 |
||
| CDS GCA 72 bp | GCTCTCTTGCTACCTCTTCACATGGTCGTACTTCTGTaGATGCACACTGTGATATTTCTTCATGGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLPLHMVVLL*MHTVIFLHGGR Trigger: CCTGCCACCATGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000634604.2 ENST00000663993.1 |
||
| CDS CCA 72 bp | ATCCTCAAATTCATATGTGATTGTGGCCAGGCGCATTaGTTCACACCAAAATCTCAGCACTTTGGGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ILKFICDCGQAH*FTPKSQHFGRP Trigger: CGGCCTCCCAAAGTGCTGAGATTTTGGTGTGAACCAATGCGCCTGGCCACAATCACATATGAATTTGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447748.5 ENST00000654680.1 |
||
| CDS TCA 72 bp | TACATGTGCCTTCAAGGGAAAAGCATGGCTAGTTGGTaGCTGCTGACAAAGTTGGTATCAGGCAGAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: YMCLQGKSMASW*LLTKLVSGRTP Trigger: AGGTGTTCTGCCTGATACCAACTTTGTCAGCAGTCACCAACTAGCCATGCTTTTCCCTTGAAGGCACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS CCA 72 bp | AAATGTTCCATAATTCTGGTGCTGGTCGCTGCTCACTaGAGTGAAAGCCATTTAGTGGCTGATCCAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KCSIILVLVAAH*SESHLVADPRE Trigger: TTCCCTTGGATCAGCCACTAAATGGCTTTCACTCCAGTGAGCAGCGACCAGCACCAGAATTATGGAACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415842.5 ENST00000634604.2 ENST00000634775.1 ENST00000634799.1 ENST00000654678.1 ENST00000658189.1 ENST00000658816.1 ENST00000663993.1 ENST00000666562.1 ENST00000670320.1 |
||
| CDS CCA 72 bp | AACCGTGAAGGACACTTATCCCAGGCTGTGAGTTTATaGACAGCAGGAACCAAGCAGTCATCCTTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: NREGHLSQAVSL*TAGTKQSSLYL Trigger: CAAATACAAGGATGACTGCTTGGTTCCTGCTGTCCATAAACTCACAGCCTGGGATAAGTGTCCTTCACGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415842.5 ENST00000654707.1 |
||
| CDS TCA 72 bp | GCTGGATCTGAACAGAAGTGCAAAGGGCATGACATTTaGAGAATTGTTTGCCTGGTGTGGATGGTTAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGSEQKCKGHDI*RIVCLVWMVRQ Trigger: TTGCCTAACCATCCACACCAGGCAAACAATTCTTCAAATGTCATGCCCTTTGCACTTCTGTTCAGATCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415842.5 ENST00000654707.1 ENST00000658816.1 |
||
| CDS CCA 72 bp | TGTAGATCGGTTTTAACCTGTCTGTACGTGAAGGACTaGCACAAAATGCTCACCTCTGTTTGCCTAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRSVLTCLYVKD*HKMLTSVCLTL Trigger: CAGAGTTAGGCAAACAGAGGTGAGCATTTTGTGCCAGTCCTTCACGTACAGACAGGTTAAAACCGATCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635398.1 ENST00000635626.1 |
||
| CDS CAA 72 bp | GTACGTGAAGGACTGGCACAAAATGCTCACCTCTGTTaGCCTAACTCTGAACTAACCCAGATTGGAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VREGLAQNAHLC*PNSELTQIGKA Trigger: TGCTTTTCCAATCTGGGTTAGTTCAGAGTTAGGCAAACAGAGGTGAGCATTTTGTGCCAGTCCTTCACGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635398.1 ENST00000635626.1 |
||
| CDS TCA 72 bp | TGTGTGCCATGGACGTCTCTCCCCTTCTCTGGGTATTaGTTTTCCCTGCTAACTTATTATAGAACATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CVPWTSLPFSGY*FSLLTYYRTSM Trigger: CATGGATGTTCTATAATAAGTTAGCAGGGAAAATCAATACCCAGAGAAGGGGAGAGACGTCCATGGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000634799.1 ENST00000647968.1 |
||
| CDS GCA 72 bp | GCATGTCGAGACAAACCTGGATTTGATTCGCAGCTCTaGCTTCTGTTTGACTACAAGCAAGTAACAAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ACRDKPGFDSQL*LLFDYKQVTSF Trigger: AAAGCTTGTTACTTGCTTGTAGTCAAACAGAAGGCAGAGCTGCGAATCAAATCCAGGTTTGTCTCGACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000415842.5 ENST00000634604.2 ENST00000634775.1 ENST00000658816.1 ENST00000666562.1 ENST00000668343.1 |
||
| CDS GCA 72 bp | GCTCTCTTGCTACCTCTTCACATGGTCGTACTTCTGTaGATGCACACTGTGATATTTCTTCTTCTTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLPLHMVVLL*MHTVIFLLLIQ Trigger: CTGTATAAGAAGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000447748.5 ENST00000654680.1 |
||
| CDS CCA 72 bp | GTCAGGGCTGGAGGACTCACACTTCTGATTTCAAAATaGTTCAAGAAACACCTCCCTAAATGGTTCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VRAGGLTLLISK*FKKHLPKWFKK Trigger: TTTCTTGAACCATTTAGGGAGGTGTTTCTTGAACCATTTTGAAATCAGAAGTGTGAGTCCTCCAGCCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447748.5 ENST00000654680.1 |
||
| CDS CAA 72 bp | GCTGTTGATAAATGTTCCATAATTCTGGTGCTGGATTaGATTCGCAGCTCTGCCTTCTGTTTGACTACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVDKCSIILVLD*IRSSAFCLTTS Trigger: GCTTGTAGTCAAACAGAAGGCAGAGCTGCGAATCAAATCCAGCACCAGAATTATGGAACATTTATCAACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444349.6 |
||
| CDS CAA 72 bp | CACACATCAAGGGAAAAGGGAACGCTCATTGTTCTTTaGTTTTGGGAGACTGGACACAATGTTGCATACATG | + |
|
Preference number: 6 (lower is better) Translates to: HTSREKGTLIVL*FWETGHNVAYM Trigger: CATGTATGCAACATTGTGTCCAGTCTCCCAAAACAAAAGAACAATGAGCGTTCCCTTTTCCCTTGATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||
| CDS CAA 90 bp | AGAACATCCATGAACCGCCAAAGGTCTTCTCCTCTCCATGAAATTTaGTCCAGTGAACAGTCCATGATGATTTCTCTTTTGTCTACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RTSMNRQRSSPLHEI*SSEQSMMISLLSTV Trigger: GACTGTAGACAAAAGAGAAATCATCATGGACTGTTCACTGGACAAAATTTCATGGAGAGGAGAAGACCTTTGGCGGTTCATGGATGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000436350.2 ENST00000444349.6 ENST00000634604.2 ENST00000634775.1 ENST00000634799.1 ENST00000647968.1 ENST00000654678.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000669029.1 ENST00000670320.1 |
||
| CDS CCA 72 bp | TACTTTATAAAACCGTGTATGGTAGTGGTTAAGAGTTaGGGCACTGGTGTCCTATATTCATTCTTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YFIKPCMVVVKS*GTGVLYSFLAL Trigger: CAGAGCCAAGAATGAATATAGGACACCAGTGCCCCAACTCTTAACCACTACCATACACGGTTTTATAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436350.2 ENST00000634799.1 ENST00000670320.1 |
||
| CDS CCA 72 bp | CTGATTTCAAAATGGTTCAAGAAACACCTCCCTAAATaGTTCAAGAAACAAAGGTGTGGCATCCCAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LISKWFKKHLPK*FKKQRCGIPTS Trigger: GGAAGTTGGGATGCCACACCTTTGTTTCTTGAACCATTTAGGGAGGTGTTTCTTGAACCATTTTGAAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447748.5 ENST00000654680.1 |
||
| CDS CCA 72 bp | CTTTTTATAAAACCGTGTATGGTAGTGGTTAAGAGTTaGGGCACTGGTGTCCTATATTCATTCTTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFIKPCMVVVKS*GTGVLYSFLAL Trigger: CAGAGCCAAGAATGAATATAGGACACCAGTGCCCCAACTCTTAACCACTACCATACACGGTTTTATAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647968.1 |
||
| CDS CAA 72 bp | ATGAACCGCCAAAGGTCTTCTCCTCTCCATGAAATTTaGTCCAGTGAACAGTCCATGATGATTTCTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MNRQRSSPLHEI*SSEQSMMISLL Trigger: CAAAAGAGAAATCATCATGGACTGTTCACTGGACAAAATTTCATGGAGAGGAGAAGACCTTTGGCGGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000436350.2 ENST00000444349.6 ENST00000634604.2 ENST00000634775.1 ENST00000634799.1 ENST00000647968.1 ENST00000654678.1 ENST00000658816.1 ENST00000663993.1 ENST00000664673.1 ENST00000666562.1 ENST00000669029.1 ENST00000670320.1 |
||
| CDS CAA 72 bp | TCTAGAGGGAGCAAAGCAGACCTTATTTGCAAATTATaGTGTAGATCGGTTTTAACCTGTCTGTACGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRGSKADLICKL*CRSVLTCLYVK Trigger: CTTCACGTACAGACAGGTTAAAACCGATCTACACAATAATTTGCAAATAAGGTCTGCTTTGCTCCCTCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635398.1 ENST00000635626.1 |
||
| CDS TCA 72 bp | CATTCAGTTTTACAGGAATATCAGATTGCTCTGGGCTaGCTTACTAGCCGTAATAACAAGGCTTATTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: HSVLQEYQIALG*LTSRNNKAYST Trigger: AGTAGAATAAGCCTTGTTATTACGGCTAGTAAGTCAGCCCAGAGCAATCTGATATTCCTGTAAAACTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654680.1 |
||
| CDS GCA 72 bp | GCTCTCTTGCTACCTCTTCACATGGTCGTACTTCTGTaGATGCACACTGTGATATTTCTTCTTTTTATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALLLPLHMVVLL*MHTVIFLLFIK Trigger: TTTTATAAAAAGAAGAAATATCACAGTGTGCATGCACAGAAGTACGACCATGTGAAGAGGTAGCAAGAGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647968.1 |
||
| CDS CAA 72 bp | TATTGTTTTAACTTTACTGTGTCCACGTACAGGTTATaGGCCACGAAATCATGTATGCATTTGACAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YCFNFTVSTYRL*ATKSCMHLTSG Trigger: CCCACTTGTCAAATGCATACATGATTTCGTGGCCAATAACCTGTACGTGGACACAGTAAAGTTAAAACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654680.1 |
||
| CDS CAA 90 bp | GTGCATCTTTATTGTTTTAACTTTACTGTGTCCACGTACAGGTTATaGGCCACGAAATCATGTATGCATTTGACAAGTGGGATAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VHLYCFNFTVSTYRL*ATKSCMHLTSGITE Trigger: TTCAGTTATCCCACTTGTCAAATGCATACATGATTTCGTGGCCAATAACCTGTACGTGGACACAGTAAAGTTAAAACAATAAAGATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654680.1 |
||
| CDS TCA 72 bp | CTTAAAGGTATTATTGGTGGACCAGGACTTTCTTGTTaGAGTGAGAATGCAGAACATAATCTCTTCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LKGIIGGPGLSC*SENAEHNLFLY Trigger: GTACAAGAAGAGATTATGTTCTGCATTCTCACTTCAACAAGAAAGTCCTGGTCCACCAATAATACCTTTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436350.2 ENST00000670320.1 |
||