Pregenerated sensors for LINC01356 (Homo sapiens)
Ensembl gene IDs: ENSG00000215866Ensembl transcript IDs: ENST00000401018.5, ENST00000433505.5, ENST00000449572.2, ENST00000661136.1, ENST00000667852.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGCGGAGCCGAGCGCGTGCGTGGCACGGAGAGGCGGGGCGGGTCTaGTCTGCGCTCTCGGCACCATGCGGCCCCCAAGACGTAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: ARSRARAWHGEAGRV*SALSAPCGPQDVEL Trigger: AAGCTCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 |
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| CDS GCA 90 bp | GAGCCGAGCGCGTGCGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTaGGCTCTCGGCACCATGCGGCCCCCAAGACGTAGAGCTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: EPSACVARRGGAGLV*ALGTMRPPRRRASL Trigger: CAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000401018.5 ENST00000433505.5 |
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| CDS GCA 90 bp | GATCGCGCCACTGCACTCCAGCCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGCGCTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: DRATALQPLSAEPSA*VARRGGAGLVCALG Trigger: GCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGGCTGGAGTGCAGTGGCGCGATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CCA 90 bp | ACCGCTGGGCTGCCTGATTACGCGCCCCCGGCCGAGCCTGCGCACTaGGGACGCAGTCGGCCCTCGCGTCCTCTGCTGCCCGAAACAAGC | + |
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Preference number: 5 (lower is better) Translates to: TAGLPDYAPPAEPAH*GRSRPSRPLLPETS Trigger: GCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCCCCAGTGCGCAGGCTCGGCCGGGGGCGCGTAATCAGGCAGCCCAGCGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | CGGCCGAGCCTGCGCACTGGGGACGCAGTCGGCCCTCGCGTCCTCTaGTGCCCGAAACAAGCGCGTGGAAAGCTTGGTCGGGGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RPSLRTGDAVGPRVL*CPKQARGKLGRGFS Trigger: TGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCCCCAGTGCGCAGGCTCGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | CCGAGCCTGCGCACTGGGGACGCAGTCGGCCCTCGCGTCCTCTGCTaGCCGAAACAAGCGCGTGGAAAGCTTGGTCGGGGCTTCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: PSLRTGDAVGPRVLC*PKQARGKLGRGFSQ Trigger: CTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCCCCAGTGCGCAGGCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | CAAGACGTAGAGCTTCCCTGCCTCGGTTTGAAGGGACCGCTGGGCTaGCTGATTACGCGCCCCCGGCCGAGCCTGCGCACTGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: QDVELPCLGLKGPLG*LITRPRPSLRTGDA Trigger: TGCGTCCCCAGTGCGCAGGCTCGGCCGGGGGCGCGTAATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | TGGCACGGAGAGGCGGGGCGGGTCTGGTCTGCGCTCTCGGCACCATaGGGCCCCCAAGACGTAGAGCTTCCCTGCCTCGGTTTGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: WHGEAGRVWSALSAP*GPQDVELPCLGLKG Trigger: TCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000401018.5 ENST00000433505.5 |
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| CDS CCA 90 bp | CGGCCCTCGCGTCCTCTGCTGCCCGAAACAAGCGCGTGGAAAGCTTaGTCGGGGCTTCTCACAGCCGCGCGCACAGACTGGTTCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: RPSRPLLPETSAWKA*SGLLTAARTDWFSP Trigger: GGGGGAGAACCAGTCTGTGCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CCA 90 bp | GGACGCAGTCGGCCCTCGCGTCCTCTGCTGCCCGAAACAAGCGCGTaGAAAGCTTGGTCGGGGCTTCTCACAGCCGCGCGCACAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: GRSRPSRPLLPETSA*KAWSGLLTAARTDW Trigger: CCAGTCTGTGCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | TCTGCGCTCTCGGCACCATGCGGCCCCCAAGACGTAGAGCTTCCCTaGCTCGGTTTGAAGGGACCGCTGGGCTGCCTGATTACGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SALSAPCGPQDVELP*LGLKGPLGCLITRP Trigger: GGGGCGCGTAATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | GCACCAAATTTCATTCGCGTTGCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGCGCTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: APNFIRVALSAEPSA*VARRGGAGLVCALG Trigger: GCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGCAACGCGAATGAAATTTGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433505.5 |
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| CDS GCA 90 bp | GCAACACAGTCAGATACTGCTTCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGCGCTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: ATQSDTASLSAEPSA*VARRGGAGLVCALG Trigger: GCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGAAGCAGTATCTGACTGTGTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449572.2 |
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| CDS GCA 90 bp | TTGAACCCGGGAGATGGAGGTTGCGATGAGCCGAGATCGCGCCACTaGACTCCAGCCATTAAGCGCGGAGCCGAGCGCGTGCGTGGCACG | + |
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Preference number: 5 (lower is better) Translates to: LNPGDGGCDEPRSRH*TPAIKRGAERVRGT Trigger: CGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATCGCAACCTCCATCTCCCGGGTTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CCA 90 bp | CCGGGAAGACGCCTGGGAGCCGGCGCTGGGGAGCCGGGCATGGGCTaGGATGTGTTTGGATTCCAATCTGGGCCTGACACCAGTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PGRRLGAGAGEPGMG*DVFGFQSGPDTSSV Trigger: CACTGAACTGGTGTCAGGCCCAGATTGGAATCCAAACACATCCCAGCCCATGCCCGGCTCCCCAGCGCCGGCTCCCAGGCGTCTTCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 90 bp | CTCGTAGGCTCATCGGGAGGTCCTGATGGGAGAACCCATGCAACTTaGCACCACAGAGCCAGGCCCGCGGCGACTGGCTCCTGGTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: LVGSSGGPDGRTHAT*HHRARPAATGSWWV Trigger: TACCCACCAGGAGCCAGTCGCCGCGGGCCTGGCTCTGTGGTGGCAAGTTGCATGGGTTCTCCCATCAGGACCTCCCGATGAGCCTACGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS TCA 90 bp | AAGACTACTGTTCATACAGCGGAAAGGGGATGGACTCATCACACCTaGGTCAAGAAAGTGCCACCCCTCCAGAGTCATGGGCCAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KTTVHTAERGWTHHT*VKKVPPLQSHGPES Trigger: GGACTCTGGCCCATGACTCTGGAGGGGTGGCACTTTCTTGACTCAGGTGTGATGAGTCCATCCCCTTTCCGCTGTATGAACAGTAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS GCA 90 bp | TGCTGTGAAGAGACCACCAAACAGGTTTTGTGTGAGCAACAAGGCTaGTTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: CCEETTKQVLCEQQG*LFHLGAGGLSPKGE Trigger: CTCTCCTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAGCAGCCTTGTTGCTCACACAAAACCTGTTTGGTGGTCTCTTCACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS CCA 90 bp | GAGATGTTCCTTGGGCTGGTTGGTCTGAGGAGCAGAGATCGTAGGTaGATCTTTCTCATGGAGCAAAGAGCAGGAGGACAGGGGATTGAT | + |
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Preference number: 5 (lower is better) Translates to: EMFLGLVGLRSRDRR*IFLMEQRAGGQGID Trigger: ATCAATCCCCTGTCCTCCTGCTCTTTGCTCCATGAGAAAGATCCACCTACGATCTCTGCTCCTCAGACCAACCAGCCCAAGGAACATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 90 bp | CAAAGCTGGGCATCTGTGATGGTCCAGGGGGCTTCCAAAGTCATCTaGCAGCATCAGTCTTCAGCCGCTAAGCTGAGAAGATCCGATTTA | + |
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Preference number: 5 (lower is better) Translates to: QSWASVMVQGASKVI*QHQSSAAKLRRSDL Trigger: TAAATCGGATCTTCTCAGCTTAGCGGCTGAAGACTGATGCTGCCAGATGACTTTGGAAGCCCCCTGGACCATCACAGATGCCCAGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 90 bp | GACCTGATATTCCTGTCTTCCTCCACTGTAAGAGTTATCCAAAGCTaGGCATCTGTGATGGTCCAGGGGGCTTCCAAAGTCATCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: DLIFLSSSTVRVIQS*ASVMVQGASKVIWQ Trigger: CTGCCAGATGACTTTGGAAGCCCCCTGGACCATCACAGATGCCCAGCTTTGGATAACTCTTACAGTGGAGGAAGACAGGAATATCAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 90 bp | AGAGACCTGATATTCCTGTCCTCCACTGTAAGAGTTATCCAAAGCTaGGCATCTGTGATGGTCCAGGGGGCTTCCAAAGTCATCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RDLIFLSSTVRVIQS*ASVMVQGASKVIWQ Trigger: CTGCCAGATGACTTTGGAAGCCCCCTGGACCATCACAGATGCCCAGCTTTGGATAACTCTTACAGTGGAGGACAGGAATATCAGGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433505.5 ENST00000449572.2 |
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| CDS CCA 90 bp | TCTGGATGCATACATGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGACCTGATATTCCTGTCTTCCTCCACTGTAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: SGCIHAGHRGYDGLA*AQRPDIPVFLHCKS Trigger: ACTCTTACAGTGGAGGAAGACAGGAATATCAGGTCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTATGCATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 90 bp | TCTGGATGCATACATGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGACCTGATATTCCTGTCCTCCACTGTAAGAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: SGCIHAGHRGYDGLA*AQRPDIPVLHCKSY Trigger: ATAACTCTTACAGTGGAGGACAGGAATATCAGGTCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTATGCATCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433505.5 ENST00000449572.2 |
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| CDS TCA 90 bp | AGTCAAAGACAGCTCTCTACTTCAGAAAAGTACCTCTGTCCCTCCTaGCTCTCCTCAGACTGGGCATTAATAAATTGGGACCATTTAATC | + |
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Preference number: 5 (lower is better) Translates to: SQRQLSTSEKYLCPS*LSSDWALINWDHLI Trigger: GATTAAATGGTCCCAATTTATTAATGCCCAGTCTGAGGAGAGTCAGGAGGGACAGAGGTACTTTTCTGAAGTAGAGAGCTGTCTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS CCA 72 bp | CGAGCGCGTGCGTGGCACGGAGAGGCGGGGCGGGTCTaGTCTGCGCTCTCGGCACCATGCGGCCCCCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RARAWHGEAGRV*SALSAPCGPQD Trigger: GTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 |
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| CDS GCA 72 bp | GCGTGCGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTaGGCTCTCGGCACCATGCGGCCCCCAAGACGTAGA | + |
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Preference number: 6 (lower is better) Translates to: ACVARRGGAGLV*ALGTMRPPRRR Trigger: TCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 |
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| CDS GCA 72 bp | GAGGCGGGGCGGGTCTGGTCTGCGCTCTCGGCACCATaGGGCCCCCAAGACGTAGAGCTTCCCTGCCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: EAGRVWSALSAP*GPQDVELPCLG Trigger: ACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGAGAGCGCAGACCAGACCCGCCCCGCCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000401018.5 ENST00000433505.5 |
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| CDS GCA 72 bp | ACTGCACTCCAGCCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TALQPLSAEPSA*VARRGGAGLVC Trigger: GCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGGCTGGAGTGCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CAA 90 bp | TCGGCACCATGCGGCCCCCAAGACGTAGAGCTTCCCTGCCTCGGTTaGAAGGGACCGCTGGGCTGCCTGATTACGCGCCCCCGGCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAPCGPQDVELPCLG*KGPLGCLITRPRPS Trigger: GCTCGGCCGGGGGCGCGTAATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | CGCACTGGGGACGCAGTCGGCCCTCGCGTCCTCTGCTaGCCGAAACAAGCGCGTGGAAAGCTTGGTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RTGDAVGPRVLC*PKQARGKLGRG Trigger: GCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCCCCAGTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | GAGCTTCCCTGCCTCGGTTTGAAGGGACCGCTGGGCTaGCTGATTACGCGCCCCCGGCCGAGCCTGCGCACT | + |
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Preference number: 6 (lower is better) Translates to: ELPCLGLKGPLG*LITRPRPSLRT Trigger: AGTGCGCAGGCTCGGCCGGGGGCGCGTAATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CCA 72 bp | CGGCCCTCGCGTCCTCTGCTGCCCGAAACAAGCGCGTaGAAAGCTTGGTCGGGGCTTCTCACAGCCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPSRPLLPETSA*KAWSGLLTAAR Trigger: GCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | CTGCGCACTGGGGACGCAGTCGGCCCTCGCGTCCTCTaGTGCCCGAAACAAGCGCGTGGAAAGCTTGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LRTGDAVGPRVL*CPKQARGKLGR Trigger: CCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGACTGCGTCCCCAGTGCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | TTCATTCGCGTTGCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: FIRVALSAEPSA*VARRGGAGLVC Trigger: GCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGCAACGCGAATGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433505.5 |
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| CDS CAA 90 bp | TCGGCCCTCGCGTCCTCTGCTGCCCGAAACAAGCGCGTGGAAAGCTaGGTCGGGGCTTCTCACAGCCGCGCGCACAGACTGGTTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SALASSAARNKRVES*VGASHSRAHRLVLP Trigger: GGGGAGAACCAGTCTGTGCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGCGAGGGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | TCAGATACTGCTTCATTAAGCGCGGAGCCGAGCGCGTaGGTGGCACGGAGAGGCGGGGCGGGTCTGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SDTASLSAEPSA*VARRGGAGLVC Trigger: GCAGACCAGACCCGCCCCGCCTCTCCGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGAAGCAGTATCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449572.2 |
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| CDS CAA 72 bp | TGCGGCCCCCAAGACGTAGAGCTTCCCTGCCTCGGTTaGAAGGGACCGCTGGGCTGCCTGATTACGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CGPQDVELPCLG*KGPLGCLITRP Trigger: GGGGCGCGTAATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | GGAGATGGAGGTTGCGATGAGCCGAGATCGCGCCACTaGACTCCAGCCATTAAGCGCGGAGCCGAGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GDGGCDEPRSRH*TPAIKRGAERV Trigger: CACGCGCTCGGCTCCGCGCTTAATGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATCGCAACCTCCATCTCC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CCA 72 bp | CGTCCTCTGCTGCCCGAAACAAGCGCGTGGAAAGCTTaGTCGGGGCTTCTCACAGCCGCGCGCACAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: RPLLPETSAWKA*SGLLTAARTDW Trigger: CCAGTCTGTGCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS CAA 72 bp | GCGTCCTCTGCTGCCCGAAACAAGCGCGTGGAAAGCTaGGTCGGGGCTTCTCACAGCCGCGCGCACAGACTG | + |
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Preference number: 6 (lower is better) Translates to: ASSAARNKRVES*VGASHSRAHRL Trigger: CAGTCTGTGCGCGCGGCTGTGAGAAGCCCCGACCAAGCTTTCCACGCGCTTGTTTCGGGCAGCAGAGGACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | TCGGCACCATGCGGCCCCCAAGACGTAGAGCTTCCCTaGCTCGGTTTGAAGGGACCGCTGGGCTGCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: SAPCGPQDVELP*LGLKGPLGCLI Trigger: AATCAGGCAGCCCAGCGGTCCCTTCAAACCGAGGCAGGGAAGCTCTACGTCTTGGGGGCCGCATGGTGCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000401018.5 ENST00000433505.5 |
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| CDS TCA 72 bp | TCCCAGCCACTCGGGAGGCTGAGGCAGAGAATTGCTTaGACCCGGGAGATGGAGGTTGCGATGAGCCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SQPLGRLRQRIA*TREMEVAMSRD Trigger: ATCTCGGCTCATCGCAACCTCCATCTCCCGGGTTCAAGCAATTCTCTGCCTCAGCCTCCCGAGTGGCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401018.5 |
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| CDS GCA 72 bp | CCTGATCCGAGTGATGGCACCAAATTTCATTCGCGTTaGATTAAGCGCGGAGCCGAGCGCGTGCGTGGCACG | + |
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Preference number: 6 (lower is better) Translates to: PDPSDGTKFHSR*IKRGAERVRGT Trigger: CGTGCCACGCACGCGCTCGGCTCCGCGCTTAATGCAACGCGAATGAAATTTGGTGCCATCACTCGGATCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433505.5 |
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| CDS GCA 72 bp | AAAGGGGATGGACTCATCACACCTGAGTCAAGAAAGTaGCACCCCTCCAGAGTCATGGGCCAGAGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KGDGLITPESRK*HPSRVMGQSPR Trigger: CCTGGGACTCTGGCCCATGACTCTGGAGGGGTGGCACTTTCTTGACTCAGGTGTGATGAGTCCATCCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS CAA 72 bp | GGAGTGGGGGTCACAAGGTGCTCAGTGGGGGAGCTTTaGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: GVGVTRCSVGEL*SQDEPGEGISQ Trigger: TTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCCCCCACTGAGCACCTTGTGACCCCCACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 ENST00000661136.1 ENST00000667852.1 |
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| CDS TCA 72 bp | GTTCATACAGCGGAAAGGGGATGGACTCATCACACCTaGGTCAAGAAAGTGCCACCCCTCCAGAGTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: VHTAERGWTHHT*VKKVPPLQSHG Trigger: CCCATGACTCTGGAGGGGTGGCACTTTCTTGACTCAGGTGTGATGAGTCCATCCCCTTTCCGCTGTATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS TCA 72 bp | AACAAGGCTGCTTATTTCACCTGGGTGCAGGTGGGCTaGGTCCGAAAGGAGAGTCAGCAAAGGGAGATAGGG | + |
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Preference number: 6 (lower is better) Translates to: NKAAYFTWVQVG*VRKESQQREIG Trigger: CCCTATCTCCCTTTGCTGACTCTCCTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAGCAGCCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS GCA 72 bp | GAGACCACCAAACAGGTTTTGTGTGAGCAACAAGGCTaGTTATTTCACCTGGGTGCAGGTGGGCTGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: ETTKQVLCEQQG*LFHLGAGGLSP Trigger: CGGACTCAGCCCACCTGCACCCAGGTGAAATAAGCAGCCTTGTTGCTCACACAAAACCTGTTTGGTGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS CCA 72 bp | GATGCATACATGCAGGTCACAGGGGATATGATGGCTTaGGCTCAGAGGCCTGACACTAAACCATGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: DAYMQVTGDMMA*AQRPDTKPWIS Trigger: GCTGATCCATGGTTTAGTGTCAGGCCTCTGAGCCCAAGCCATCATATCCCCTGTGACCTGCATGTATGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS CCA 72 bp | TTCCTGTCTTCCTCCACTGTAAGAGTTATCCAAAGCTaGGCATCTGTGATGGTCCAGGGGGCTTCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLSSSTVRVIQS*ASVMVQGASKV Trigger: GACTTTGGAAGCCCCCTGGACCATCACAGATGCCCAGCTTTGGATAACTCTTACAGTGGAGGAAGACAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 72 bp | ATACATGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGACCTGATATTCCTGTCTTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IHAGHRGYDGLA*AQRPDIPVFLH Trigger: GTGGAGGAAGACAGGAATATCAGGTCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000401018.5 ENST00000661136.1 ENST00000667852.1 |
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| CDS CCA 72 bp | ATATTCCTGTCCTCCACTGTAAGAGTTATCCAAAGCTaGGCATCTGTGATGGTCCAGGGGGCTTCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: IFLSSTVRVIQS*ASVMVQGASKV Trigger: GACTTTGGAAGCCCCCTGGACCATCACAGATGCCCAGCTTTGGATAACTCTTACAGTGGAGGACAGGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433505.5 ENST00000449572.2 |
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| CDS CAA 72 bp | CTGAAAGAGGTCCCAATCCAGACCCCAAGAGAGTTCTaGGATCTCCTGAAAGACAGTAAGGGAGGAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: LKEVPIQTPREF*DLLKDSKGGDH Trigger: ATGGTCTCCTCCCTTACTGTCTTTCAGGAGATCCAAGAACTCTCTTGGGGTCTGGATTGGGACCTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS TCA 72 bp | AACAAGGCTGTTTATTTCACCTGGGTGCAGGTGGGCTaGGTCCAAAAAGAGTCAGTGAATGGAGATAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: NKAVYFTWVQVG*VQKESVNGDRG Trigger: ACCCCTATCTCCATTCACTGACTCTTTTTGGACTCAGCCCACCTGCACCCAGGTGAAATAAACAGCCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000661136.1 ENST00000667852.1 |
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| CDS TCA 72 bp | GGGTGGAAAGAAGGAAAACTCGAGTCAGCCTGGGAATaGCCCTATCTTGTGCTGTTAACCACCAAGACTACT | + |
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Preference number: 6 (lower is better) Translates to: GWKEGKLESAWE*PYLVLLTTKTT Trigger: AGTAGTCTTGGTGGTTAACAGCACAAGATAGGGTCATTCCCAGGCTGACTCGAGTTTTCCTTCTTTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS TCA 72 bp | TCCCAATCCAGACCCCAAGAGAGTTCTTGGATCTCCTaGAAGACAGTAAGGGAGGAGACCATCCCTCATATT | + |
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Preference number: 6 (lower is better) Translates to: SQSRPQESSWIS*KTVREETIPHI Trigger: AATATGAGGGATGGTCTCCTCCCTTACTGTCTTTCAGGAGATCCAAGAACTCTCTTGGGGTCTGGATTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS GCA 72 bp | CCTGATCCGAGTGATGGCACCAAATTTCATTCGCGTTaGTGTGAAGAGACCACCAAACAGGTTTTGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PDPSDGTKFHSR*CEETTKQVLCE Trigger: CTCACACAAAACCTGTTTGGTGGTCTCTTCACAGCAACGCGAATGAAATTTGGTGCCATCACTCGGATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS CAA 72 bp | CATTCGCGTTGCTGTGAAGAGACCACCAAACAGGTTTaGTGTGAGCAACAAGGCTGCTTATTTCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HSRCCEETTKQV*CEQQGCLFHLG Trigger: ACCCAGGTGAAATAAGCAGCCTTGTTGCTCACACAAAACCTGTTTGGTGGTCTCTTCACAGCAACGCGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS CAA 90 bp | ATACTGTTACTGAAAGAGGTCCCAATCCAGACCCCAAGAGAGTTCTaGGATCTCCTGAAAGACAGTAAGGGAGGAGACCATCCCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: ILLLKEVPIQTPREF*DLLKDSKGGDHPSY Trigger: ATATGAGGGATGGTCTCCTCCCTTACTGTCTTTCAGGAGATCCAAGAACTCTCTTGGGGTCTGGATTGGGACCTCTTTCAGTAACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667852.1 |
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| CDS TCA 72 bp | TTAAAATTGGTGAGATGTTCCTTGGGCTGGTTGGTCTaGGGAGCAGAGATCGTAGGTGGATCTTTCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: LKLVRCSLGWLV*GAEIVGGSFSW Trigger: CCATGAGAAAGATCCACCTACGATCTCTGCTCCTCAGACCAACCAGCCCAAGGAACATCTCACCAATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000401018.5 ENST00000433505.5 ENST00000449572.2 ENST00000661136.1 ENST00000667852.1 |
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| CDS TCA 72 bp | ACCACCCCTAGAATTTCCAGTAAAACAGCACCAGCCTaGAGATCATGTTCTTACCAAAGGGTGGAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TTPRISSKTAPA*RSCSYQRVERR Trigger: CCTTCTTTCCACCCTTTGGTAAGAACATGATCTTCAGGCTGGTGCTGTTTTACTGGAAATTCTAGGGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS GCA 72 bp | CATTTAATGCTTGCCTTGTTACACCCTGTGGGGACTTaGCAAGTCAAAGACAGCTCTCTACTTCAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HLMLALLHPVGT*QVKDSSLLQKS Trigger: ACTTTTCTGAAGTAGAGAGCTGTCTTTGACTTGGCAAGTCCCCACAGGGTGTAACAAGGCAAGCATTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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| CDS CAA 72 bp | CAATTTCATCTCAAACTATTGCATTTAATGCTTGCCTaGTTACACCCTGTGGGGACTTGCCAAGTCAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: QFHLKLLHLMLA*LHPVGTCQVKD Trigger: GTCTTTGACTTGGCAAGTCCCCACAGGGTGTAACAAGGCAAGCATTAAATGCAATAGTTTGAGATGAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661136.1 |
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