Pregenerated sensors for LINC01355 (Homo sapiens)
Ensembl gene IDs: ENSG00000261326Ensembl transcript IDs: ENST00000566551.1, ENST00000604481.1, ENST00000635010.1, ENST00000635280.1, ENST00000647667.1, ENST00000649705.1, ENST00000655082.1, ENST00000659021.1, ENST00000660265.1, ENST00000662426.1, ENST00000666981.1, ENST00000670871.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTGCAGTGGCTATTCACAAGTACAGTCATTGTGCACTACAGCCTTaGAGGCCTGGGCTCAAGCCTCAGCCTGGAGGACTGAGACTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SAVAIHKYSHCALQP*RPGLKPQPGGLRLS Trigger: ACTGAGTCTCAGTCCTCCAGGCTGAGGCTTGAGCCCAGGCCTTCAAGGCTGTAGTGCACAATGACTGTACTTGTGAATAGCCACTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647667.1 ENST00000649705.1 |
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| CDS CCA 90 bp | ATACCAGTGCTGTTAGTCATTTCTGCTACCTGGATACAGAGCATCTaGTGTAAATTTGTGCATCCAGCCTGGCTCCCATTTTCCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IPVLLVISATWIQSI*CKFVHPAWLPFSPN Trigger: GTTGGGGGAAAATGGGAGCCAGGCTGGATGCACAAATTTACACCAGATGCTCTGTATCCAGGTAGCAGAAATGACTAACAGCACTGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 90 bp | AAATTGGCCCTTTGTACACTTCGGTGCAATTTCTGTCTTAGCTGCTaGGAAGCAGAGGAAAAGCACCACCTTGCTCAGAAACTACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KLALCTLRCNFCLSC*EAEEKHHLAQKLPS Trigger: AGAAGGTAGTTTCTGAGCAAGGTGGTGCTTTTCCTCTGCTTCTCAGCAGCTAAGACAGAAATTGCACCGAAGTGTACAAAGGGCCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS GCA 90 bp | CAGGAGTTGAGGAAAGGAAATTCTGGGCTCTCTAAAAAGCCTTCTTaGCTCCTTGGTGCAGTAAGCAGCATGTCTTGTAAAAAGCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: QELRKGNSGLSKKPS*LLGAVSSMSCKKPN Trigger: GTTAGGCTTTTTACAAGACATGCTGCTTACTGCACCAAGGAGGCAAGAAGGCTTTTTAGAGAGCCCAGAATTTCCTTTCCTCAACTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CCA 90 bp | GTCTTATCCTATCTGTTGCCTAATGATGATGAAGGAGATCAGATTTaGGATTTACAGATGTCCTCCTCTGGAGACGCTTTTGCTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLSYLLPNDDEGDQI*DLQMSSSGDAFALG Trigger: TCCCAGAGCAAAAGCGTCTCCAGAGGAGGACATCTGTAAATCCCAAATCTGATCTCCTTCATCATCATTAGGCAACAGATAGGATAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 90 bp | AAACAAAATGTCCACAATCCACAAAGAAAGAGGGGTGGACCTAAGTaGCAGGGTACTAAACATATATACTATGATAAGCTCTGCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: KQNVHNPQRKRGGPK*QGTKHIYYDKLCFL Trigger: GAGGAAGCAGAGCTTATCATAGTATATATGTTTAGTACCCTGTCACTTAGGTCCACCCCTCTTTCTTTGTGGATTGTGGACATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 72 bp | GCTATTCACAAGTACAGTCATTGTGCACTACAGCCTTaGAGGCCTGGGCTCAAGCCTCAGCCTGGAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: AIHKYSHCALQP*RPGLKPQPGGL Trigger: CAGTCCTCCAGGCTGAGGCTTGAGCCCAGGCCTTCAAGGCTGTAGTGCACAATGACTGTACTTGTGAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647667.1 ENST00000649705.1 |
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| CDS TCA 72 bp | CCCTCCTCCCTTTCTTCTTGCCTTTGGTCCCATGAGTaGGCCTTAGAAATCATGGTCACCAGCAGACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSSLSSCLWSHE*ALEIMVTSRLP Trigger: TGGCAGTCTGCTGGTGACCATGATTTCTAAGGCTCACTCATGGGACCAAAGGCAAGAAGAAAGGGAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS GCA 72 bp | CTGCTACCTGGATACAGAGCATCTGGTGTAAATTTGTaGATCCAGCCTGGCTCCCATTTTCCCCCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLPGYRASGVNL*IQPGSHFPPTA Trigger: TGCTGTTGGGGGAAAATGGGAGCCAGGCTGGATGCACAAATTTACACCAGATGCTCTGTATCCAGGTAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 72 bp | GAAATCATGGTCACCAGCAGACTGCCAGGGACAAAGTaGATGGAAGTTACTTTTGAGAAGGGGGATTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EIMVTSRLPGTK*MEVTFEKGDSG Trigger: GCCTGAATCCCCCTTCTCAAAAGTAACTTCCATTCACTTTGTCCCTGGCAGTCTGCTGGTGACCATGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CCA 72 bp | AGGAGATCAGATTTGGGATTTACAGATGTCCTCCTCTaGAGACGCTTTTGCTCTGGGACTGATGGATACCAG | + |
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Preference number: 6 (lower is better) Translates to: RRSDLGFTDVLL*RRFCSGTDGYQ Trigger: CTGGTATCCATCAGTCCCAGAGCAAAAGCGTCTCCAGAGGAGGACATCTGTAAATCCCAAATCTGATCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CCA 72 bp | GCAAAATGGCAACTGACTTGGCAATCTCTCCCAATTTaGGGATGCCCTGGACACAGTAAGCAGAGTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: AKWQLTWQSLPI*GCPGHSKQSQM Trigger: CATTTGACTCTGCTTACTGTGTCCAGGGCATCCCCAAATTGGGAGAGATTGCCAAGTCAGTTGCCATTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | TTTCTGCTACCTGGATACAGAGCATCTGGTGTAAATTaGTGCATCCAGCCTGGCTCCCATTTTCCCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: FLLPGYRASGVN*CIQPGSHFPPT Trigger: TGTTGGGGGAAAATGGGAGCCAGGCTGGATGCACAAATTTACACCAGATGCTCTGTATCCAGGTAGCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 90 bp | GTTGCAGAGTGGAAATGCATCCTAGATTGGATTAAGCTAAGAGGCTaGAGAGGTGGCAACCACGGACTTCTGCTCTTAGACATCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VAEWKCILDWIKLRG*RGGNHGLLLLDILV Trigger: AACCAGGATGTCTAAGAGCAGAAGTCCGTGGTTGCCACCTCTCAAGCCTCTTAGCTTAATCCAATCTAGGATGCATTTCCACTCTGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000566551.1 ENST00000604481.1 ENST00000635010.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | CTGCTGGCTTTGTCTCCATACTTCCACTCTGTTCTCTaGACTCAGTTCTCAATTCAGGGCCAAAGTCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLALSPYFHSVL*TQFSIQGQSQE Trigger: CTCTTGACTTTGGCCCTGAATTGAGAACTGAGTCAAGAGAACAGAGTGGAAGTATGGAGACAAAGCCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | TGGAAATGCATCCTAGATTGGATTAAGCTAAGAGGCTaGAGAGGTGGCAACCACGGACTTCTGCTCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: WKCILDWIKLRG*RGGNHGLLLLD Trigger: GTCTAAGAGCAGAAGTCCGTGGTTGCCACCTCTCAAGCCTCTTAGCTTAATCCAATCTAGGATGCATTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000566551.1 ENST00000604481.1 ENST00000635010.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 72 bp | CAGTTCTCAATTCAGGGCCAAAGTCAAGAGCAAAACTaGACCTGTAGGCTAGTCCTTGGTAAAAGTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QFSIQGQSQEQN*TCRLVLGKSKA Trigger: TGCCTTACTTTTACCAAGGACTAGCCTACAGGTTCAGTTTTGCTCTTGACTTTGGCCCTGAATTGAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CCA 72 bp | ATACTGTTTGTTGCAGAGTGGAAATGCATCCTAGATTaGATTAAGCTAAGAGGCTTGAGAGGTGGCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: ILFVAEWKCILD*IKLRGLRGGNH Trigger: GTGGTTGCCACCTCTCAAGCCTCTTAGCTTAATCCAATCTAGGATGCATTTCCACTCTGCAACAAACAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000566551.1 ENST00000604481.1 ENST00000635010.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | TGCAGGCTCTGCAATCAGCCTGTATGGGTTCAAATATaGATCCCAGATCACAGTTATGCAAACTTAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: CRLCNQPVWVQI*IPDHSYANLGQ Trigger: TTGGCCTAAGTTTGCATAACTGTGATCTGGGATCAATATTTGAACCCATACAGGCTGATTGCAGAGCCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 72 bp | TGGTTGGCTTCCATTTCAGCATCAGTCACGAAATCTTaGAGGTCAGACACAGTAAACAGGGAAGGACATAAA | + |
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Preference number: 6 (lower is better) Translates to: WLASISASVTKS*RSDTVNREGHK Trigger: TTTATGTCCTTCCCTGTTTACTGTGTCTGACCTTCAAGATTTCGTGACTGATGCTGAAATGGAAGCCAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566551.1 ENST00000635280.1 |
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| CDS CAA 72 bp | TTAGAGCATTCTGACCATAAAATCAGGCAGTTATCCTaGCTGACTGGTCCTGGATTCCAAATGACACATTCC | + |
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Preference number: 6 (lower is better) Translates to: LEHSDHKIRQLS*LTGPGFQMTHS Trigger: GGAATGTGTCATTTGGAATCCAGGACCAGTCAGCAAGGATAACTGCCTGATTTTATGGTCAGAATGCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566551.1 ENST00000635280.1 |
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| CDS CAA 72 bp | CATCAGTCACGAAATCATAAAATCAGGCAGTTATCCTaGCTGACTGGTCCTGGATTCCAAATGACACATTCC | + |
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Preference number: 6 (lower is better) Translates to: HQSRNHKIRQLS*LTGPGFQMTHS Trigger: GGAATGTGTCATTTGGAATCCAGGACCAGTCAGCAAGGATAACTGCCTGATTTTATGATTTCGTGACTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 90 bp | CTTCTCCACAATACTGAGAAACACACCAAACAGGGGCAAGGCTTTTaGAAGCTAGGAATAAAGAAGCTGCCCATCTTTACTAATAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLHNTEKHTKQGQGF*KLGIKKLPIFTNRK Trigger: TTTCCTATTAGTAAAGATGGGCAGCTTCTTTATTCCTAGCTTCAAAAAGCCTTGCCCCTGTTTGGTGTGTTTCTCAGTATTGTGGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CCA 72 bp | AACCAAAGCAAAAAGACACTGCTCAAAGCTAATCCATaGGCAGTACCTGCATTAAAACTGTTATCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NQSKKTLLKANP*AVPALKLLSAN Trigger: ATTTGCAGATAACAGTTTTAATGCAGGTACTGCCCATGGATTAGCTTTGAGCAGTGTCTTTTTGCTTTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000566551.1 ENST00000604481.1 ENST00000635010.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | GGGAAGGACATAAAATTAAGTGATTTGGGCGTAGTTTaGAGTCTCACAACTTTAACAGGGATGAGTCATACA | + |
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Preference number: 6 (lower is better) Translates to: GKDIKLSDLGVV*SLTTLTGMSHT Trigger: TGTATGACTCATCCCTGTTAAAGTTGTGAGACTCAAAACTACGCCCAAATCACTTAATTTTATGTCCTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566551.1 ENST00000635280.1 |
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| CDS CAA 90 bp | TATCCAATACATTTAATCACAGCCTCACTGACATCTCAATTGCCCTaGAGACTCAAAACAGAGGGGGAACTTCTGAGAAATGTAATTATT | + |
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Preference number: 6 (lower is better) Translates to: YPIHLITASLTSQLP*RLKTEGELLRNVII Trigger: AATAATTACATTTCTCAGAAGTTCCCCCTCTGTTTTGAGTCTCAAGGGCAATTGAGATGTCAGTGAGGCTGTGATTAAATGTATTGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS TCA 72 bp | TCAGACACAGTAAACAGGGAAGGACATAAAATTAAGTaGTTTGGGCGTAGTTTTGAGTCTCACAACTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SDTVNREGHKIK*FGRSFESHNFN Trigger: GTTAAAGTTGTGAGACTCAAAACTACGCCCAAATCACTTAATTTTATGTCCTTCCCTGTTTACTGTGTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566551.1 ENST00000635280.1 |
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| CDS GCA 72 bp | TGTATGGGTTCAAATATTGATCCCAGATCACAGTTATaGAAACTTAGGCCAAGTTACTTAATTTTTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CMGSNIDPRSQL*KLRPSYLIFLP Trigger: AGGCAGAAAAATTAAGTAACTTGGCCTAAGTTTGCATAACTGTGATCTGGGATCAATATTTGAACCCATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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| CDS CAA 72 bp | AGGTCCTATCACTTTACAGGTGTTTTTATCATTCATTaGAAGTCTATTCCAAAGACATCAGTTATCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: RSYHFTGVFIIH*KSIPKTSVIPH Trigger: ATGTGGGATAACTGATGTCTTTGGAATAGACTTCAAATGAATGATAAAAACACCTGTAAAGTGATAGGACCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000566551.1 ENST00000635280.1 ENST00000647667.1 ENST00000649705.1 ENST00000655082.1 ENST00000659021.1 ENST00000660265.1 ENST00000662426.1 ENST00000666981.1 ENST00000670871.1 |
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