Pregenerated sensors for LINC01354 (Homo sapiens)
Ensembl gene IDs: ENSG00000231768Ensembl transcript IDs: ENST00000421207.2, ENST00000435574.2, ENST00000653099.1, ENST00000653353.1, ENST00000663964.1, ENST00000665108.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCCCGGGAGCACAGGAGTCAAAGCAAGACCAGGAGCGGGTTGCTaGGAGGACGCCACGCTGACTGGGGATCGAGAGGGTGGCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: QPGSTGVKARPGAGC*EDATLTGDREGGFL Trigger: AAGGAAGCCACCCTCTCGATCCCCAGTCAGCGTGGCGTCCTCTCAGCAACCCGCTCCTGGTCTTGCTTTGACTCCTGTGCTCCCGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | CCCAGCCTGGACTGGAGCTGCGTGGCTGCCTTCCTTCTGTGCGGCTaGACGCCCCGGCTAACTGAGAGGGAATTCTCACGTGACCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: PSLDWSCVAAFLLCG*TPRLTEREFSRDRR Trigger: TCTTCGGTCACGTGAGAATTCCCTCTCAGTTAGCCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | CTCTCTCCCAGCCTGGACTGGAGCTGCGTGGCTGCCTTCCTTCTGTaGGGCTGCACGCCCCGGCTAACTGAGAGGGAATTCTCACGTGAC | + |
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Preference number: 5 (lower is better) Translates to: LSPSLDWSCVAAFLL*GCTPRLTEREFSRD Trigger: GTCACGTGAGAATTCCCTCTCAGTTAGCCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGGAGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | TGCTCAGTGGGAGATGGATCTACAAAGCTCTCTCCCAGCCTGGACTaGAGCTGCGTGGCTGCCTTCCTTCTGTGCGGCTGCACGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: CSVGDGSTKLSPSLD*SCVAAFLLCGCTPR Trigger: CCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | GTGGGAGATGGATCTACAAAGCTCTCTCCCAGCCTGGACTGGAGCTaGGTGGCTGCCTTCCTTCTGTGCGGCTGCACGCCCCGGCTAACT | + |
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Preference number: 5 (lower is better) Translates to: VGDGSTKLSPSLDWS*VAAFLLCGCTPRLT Trigger: AGTTAGCCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | AAGCCTGCTCAGTGGGAGATGGATCTACAAAGCTCTCTCCCAGCCTaGACTGGAGCTGCGTGGCTGCCTTCCTTCTGTGCGGCTGCACGC | + |
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Preference number: 5 (lower is better) Translates to: KPAQWEMDLQSSLPA*TGAAWLPSFCAAAR Trigger: GCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCAGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | GTCAGCGCCGACTGCTCTTACTTAACAGGGGAGAGCCACAGACTCTaGAGTGCGTGGCAGGCAGGGCCTGTCACTGTCTACTGTTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: VSADCSYLTGESHRL*SAWQAGPVTVYCCR Trigger: GCGACAACAGTAGACAGTGACAGGCCCTGCCTGCCACGCACTGCAGAGTCTGTGGCTCTCCCCTGTTAAGTAAGAGCAGTCGGCGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 90 bp | GGTGGCCTTTTTGTTCAGTGCTTCCTCGGCGGCTGGGACTCACCCTaGTTTAAAAGCTCCAGACGTGTTCTCGGCAGCCCGGGAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: GGLFVQCFLGGWDSP*FKSSRRVLGSPGAQ Trigger: CTGTGCTCCCGGGCTGCCGAGAACACGTCTGGAGCTTTTAAATCAGGGTGAGTCCCAGCCGCCGAGGAAGCACTGAACAAAAAGGCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | AGTTCTGTGAGTATCCTCATGACCTCACTGAACGTCAGCGCCGACTaGTCTTACTTAACAGGGGAGAGCCACAGACTCTGCAGTGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSVSILMTSLNVSAD*SYLTGESHRLCSAW Trigger: CCACGCACTGCAGAGTCTGTGGCTCTCCCCTGTTAAGTAAGAGCAGTCGGCGCTGACGTTCAGTGAGGTCATGAGGATACTCACAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | TGCACGCCCCGGCTAACTGAGAGGGAATTCTCACGTGACCGAAGATaGCCCCAGACTTCCCACTATCTCACTTCCTTTGTGTTCCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CTPRLTEREFSRDRR*PQTSHYLTSFVFLA Trigger: TGCAAGGAACACAAAGGAAGTGAGATAGTGGGAAGTCTGGGGCCATCTTCGGTCACGTGAGAATTCCCTCTCAGTTAGCCGGGGCGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | ACATTATCGGTAGAGTCTCTCCTTGCAGGAGGGAAGCCTGCTCAGTaGGAGATGGATCTACAAAGCTCTCTCCCAGCCTGGACTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: TLSVESLLAGGKPAQ*EMDLQSSLPAWTGA Trigger: AGCTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCAGGCTTCCCTCCTGCAAGGAGAGACTCTACCGATAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | TTGTGTTCCTTGCAGAGACACACAGGGGACTGTGGAAGTCAGCTGTaGAGGACGCTTGAGAGATTTTTGACCCAGAACTCAACTTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LCSLQRHTGDCGSQL*RTLERFLTQNSTLG Trigger: CCCCAAAGTTGAGTTCTGGGTCAAAAATCTCTCAAGCGTCCTCCACAGCTGACTTCCACAGTCCCCTGTGTGTCTCTGCAAGGAACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 90 bp | CTCCCAGCTAAAGCTGTCACCTTGGACAGGAAGCGGTGGGTTCTGTaGAAAACCACAGGAAAAACTTTCCCTAGAACACTGGATTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LPAKAVTLDRKRWVL*KTTGKTFPRTLDFK Trigger: CTTGAAATCCAGTGTTCTAGGGAAAGTTTTTCCTGTGGTTTTGCACAGAACCCACCGCTTCCTGTCCAAGGTGACAGCTTTAGCTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 90 bp | GATGCCTATGCCCTTTCTAAGCTTGTAGACACTTTAAAGCAGTGCTaGAAACTGTGCCTGGCACTTAATGGGGACACAGTAAGCGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: DAYALSKLVDTLKQC*KLCLALNGDTVSAQ Trigger: CTGAGCGCTTACTGTGTCCCCATTAAGTGCCAGGCACAGTTTTCAGCACTGCTTTAAAGTGTCTACAAGCTTAGAAAGGGCATAGGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | TTAATTTCTCTCCCAGCTAAAGCTGTCACCTTGGACAGGAAGCGGTaGGTTCTGTGCAAAACCACAGGAAAAACTTTCCCTAGAACACTG | + |
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Preference number: 5 (lower is better) Translates to: LISLPAKAVTLDRKR*VLCKTTGKTFPRTL Trigger: CAGTGTTCTAGGGAAAGTTTTTCCTGTGGTTTTGCACAGAACCCACCGCTTCCTGTCCAAGGTGACAGCTTTAGCTGGGAGAGAAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 90 bp | ATTGTGCTGGAGAGACTTGGACTGTCTCTCAAGAAGGTCTTACAGTaGTCATTAGAACAAAAAGGCATCTCTTGGCTATGTGATCACGCA | + |
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Preference number: 5 (lower is better) Translates to: IVLERLGLSLKKVLQ*SLEQKGISWLCDHA Trigger: TGCGTGATCACATAGCCAAGAGATGCCTTTTTGTTCTAATGATCACTGTAAGACCTTCTTGAGAGACAGTCCAAGTCTCTCCAGCACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 90 bp | GAAAATGCTCTTTGCTTTATAATGTCAGAAGAAGTCCAGGTGCAGTaGCTTGTACCCACAATCTCAGCAATTTGGGAGACCGAACTATTG | + |
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Preference number: 5 (lower is better) Translates to: ENALCFIMSEEVQVQ*LVPTISAIWETELL Trigger: CAATAGTTCGGTCTCCCAAATTGCTGAGATTGTGGGTACAAGCCACTGCACCTGGACTTCTTCTGACATTATAAAGCAAAGAGCATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 90 bp | GAACAAAAAGGCATCTCTTGGCTATGTGATCACGCATTTACCTCATaGGATAGCAGCATATTATTAACCACCATCTCCTTAGCAATCCGG | + |
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Preference number: 5 (lower is better) Translates to: EQKGISWLCDHAFTS*DSSILLTTISLAIR Trigger: CCGGATTGCTAAGGAGATGGTGGTTAATAATATGCTGCTATCTCATGAGGTAAATGCGTGATCACATAGCCAAGAGATGCCTTTTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 72 bp | AGCCTGGACTGGAGCTGCGTGGCTGCCTTCCTTCTGTaGGGCTGCACGCCCCGGCTAACTGAGAGGGAATTC | + |
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Preference number: 6 (lower is better) Translates to: SLDWSCVAAFLL*GCTPRLTEREF Trigger: GAATTCCCTCTCAGTTAGCCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 72 bp | GACTGGAGCTGCGTGGCTGCCTTCCTTCTGTGCGGCTaGACGCCCCGGCTAACTGAGAGGGAATTCTCACGT | + |
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Preference number: 6 (lower is better) Translates to: DWSCVAAFLLCG*TPRLTEREFSR Trigger: ACGTGAGAATTCCCTCTCAGTTAGCCGGGGCGTGCAGCCGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | CAAGACCAGGAGCGGGTTGCTGAGAGGACGCCACGCTaGCTGGGGATCGAGAGGGTGGCTTCCTTCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: QDQERVAERTPR*LGIERVASFKQ Trigger: CTGTTTGAAGGAAGCCACCCTCTCGATCCCCAGTCAGCGTGGCGTCCTCTCAGCAACCCGCTCCTGGTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | AGCACAGGAGTCAAAGCAAGACCAGGAGCGGGTTGCTaGGAGGACGCCACGCTGACTGGGGATCGAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: STGVKARPGAGC*EDATLTGDREG Trigger: ACCCTCTCGATCCCCAGTCAGCGTGGCGTCCTCTCAGCAACCCGCTCCTGGTCTTGCTTTGACTCCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | ACCAGGAGCGGGTTGCTGAGAGGACGCCACGCTGACTaGGGATCGAGAGGGTGGCTTCCTTCAAACAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TRSGLLRGRHAD*GSRGWLPSNRE Trigger: TTCTCTGTTTGAAGGAAGCCACCCTCTCGATCCCCAGTCAGCGTGGCGTCCTCTCAGCAACCCGCTCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | CAGTGGGAGATGGATCTACAAAGCTCTCTCCCAGCCTaGACTGGAGCTGCGTGGCTGCCTTCCTTCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: QWEMDLQSSLPA*TGAAWLPSFCA Trigger: CGCACAGAAGGAAGGCAGCCACGCAGCTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 72 bp | GACTGCTCTTACTTAACAGGGGAGAGCCACAGACTCTaGAGTGCGTGGCAGGCAGGGCCTGTCACTGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: DCSYLTGESHRL*SAWQAGPVTVY Trigger: GTAGACAGTGACAGGCCCTGCCTGCCACGCACTGCAGAGTCTGTGGCTCTCCCCTGTTAAGTAAGAGCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | CTCTCCTTGCAGGAGGGAAGCCTGCTCAGTGGGAGATaGATCTACAAAGCTCTCTCCCAGCCTGGACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSLQEGSLLSGR*IYKALSQPGLE Trigger: CTCCAGTCCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCAGGCTTCCCTCCTGCAAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | TTTGTTCAGTGCTTCCTCGGCGGCTGGGACTCACCCTaGTTTAAAAGCTCCAGACGTGTTCTCGGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: FVQCFLGGWDSP*FKSSRRVLGSP Trigger: CGGGCTGCCGAGAACACGTCTGGAGCTTTTAAATCAGGGTGAGTCCCAGCCGCCGAGGAAGCACTGAACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | GTAGAGTCTCTCCTTGCAGGAGGGAAGCCTGCTCAGTaGGAGATGGATCTACAAAGCTCTCTCCCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VESLLAGGKPAQ*EMDLQSSLPAW Trigger: CCAGGCTGGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCAGGCTTCCCTCCTGCAAGGAGAGACTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 90 bp | GAAGATGGCCCCAGACTTCCCACTATCTCACTTCCTTTGTGTTCCTaGCAGAGACACACAGGGGACTGTGGAAGTCAGCTGTGGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: EDGPRLPTISLPLCS*QRHTGDCGSQLWRT Trigger: CGTCCTCCACAGCTGACTTCCACAGTCCCCTGTGTGTCTCTGCAAGGAACACAAAGGAAGTGAGATAGTGGGAAGTCTGGGGCCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 90 bp | CACGTGACCGAAGATGGCCCCAGACTTCCCACTATCTCACTTCCTTaGTGTTCCTTGCAGAGACACACAGGGGACTGTGGAAGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HVTEDGPRLPTISLP*CSLQRHTGDCGSQL Trigger: CAGCTGACTTCCACAGTCCCCTGTGTGTCTCTGCAAGGAACACAAAGGAAGTGAGATAGTGGGAAGTCTGGGGCCATCTTCGGTCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 72 bp | AGTATCCTCATGACCTCACTGAACGTCAGCGCCGACTaGTCTTACTTAACAGGGGAGAGCCACAGACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SILMTSLNVSAD*SYLTGESHRLC Trigger: GCAGAGTCTGTGGCTCTCCCCTGTTAAGTAAGAGCAGTCGGCGCTGACGTTCAGTGAGGTCATGAGGATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | AGACCTTGTCCCTGCCCAAACCTTGATTCTCTCCCTTaGAAAACAGGGACGATGATAGCACCTCCCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RPCPCPNLDSLP*KTGTMIAPPSA Trigger: CGCTGAGGGAGGTGCTATCATCGTCCCTGTTTTTCAAGGGAGAGAATCAAGGTTTGGGCAGGGACAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421207.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 |
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| CDS GCA 72 bp | ATTATCGGTAGAGTCTCTCCTTGCAGGAGGGAAGCCTaGTCAGTGGGAGATGGATCTACAAAGCTCTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IIGRVSPCRREA*SVGDGSTKLSP Trigger: GGGAGAGAGCTTTGTAGATCCATCTCCCACTGAGCAGGCTTCCCTCCTGCAAGGAGAGACTCTACCGATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | CAGGTGCAGTGGCTTGTACCCACAATCTCAGCAATTTaGGAGACCGAACTATTGGGATTGCTTGAGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QVQWLVPTISAI*ETELLGLLEAR Trigger: CCTGGCCTCAAGCAATCCCAATAGTTCGGTCTCCCAAATTGCTGAGATTGTGGGTACAAGCCACTGCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | CGGCTAACTGAGAGGGAATTCTCACGTGACCGAAGATaGCCCCAGACTTCCCACTATCTCACTTCCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: RLTEREFSRDRR*PQTSHYLTSFV Trigger: CACAAAGGAAGTGAGATAGTGGGAAGTCTGGGGCCATCTTCGGTCACGTGAGAATTCCCTCTCAGTTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 72 bp | GAAGATGGCCCCAGACTTCCCACTATCTCACTTCCTTaGTGTTCCTTGCAGAGACACACAGGGGACTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EDGPRLPTISLP*CSLQRHTGDCG Trigger: TCCACAGTCCCCTGTGTGTCTCTGCAAGGAACACAAAGGAAGTGAGATAGTGGGAAGTCTGGGGCCATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CCA 72 bp | CTCCCAGCTAAAGCTGTCACCTTGGACAGGAAGCGGTaGGTTCTGTGCAAAACCACAGGAAAAACTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LPAKAVTLDRKR*VLCKTTGKTFP Trigger: AGGGAAAGTTTTTCCTGTGGTTTTGCACAGAACCCACCGCTTCCTGTCCAAGGTGACAGCTTTAGCTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 90 bp | TTAACCACCATCTCCTTAGCAATCCGGGCCAGGACAATAAGACTTTaGTACCCACAGTTTGTCCTCTCCAAGCCCTCTCAGCCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: LTTISLAIRARTIRL*YPQFVLSKPSQPII Trigger: GATGATGGGCTGAGAGGGCTTGGAGAGGACAAACTGTGGGTACAAAAGTCTTATTGTCCTGGCCCGGATTGCTAAGGAGATGGTGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | CAACATAGCAAGACCTTGTCCCTTGATTCTCTCCCTTaGAAAACAGGGACGATGATAGCACCTCCCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: QHSKTLSLDSLP*KTGTMIAPPSA Trigger: CGCTGAGGGAGGTGCTATCATCGTCCCTGTTTTTCAAGGGAGAGAATCAAGGGACAAGGTCTTGCTATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435574.2 ENST00000665108.1 |
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| CDS CAA 72 bp | ATCTCCTTAGCAATCCGGGCCAGGACAATAAGACTTTaGTACCCACAGTTTGTCCTCTCCAAGCCCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: ISLAIRARTIRL*YPQFVLSKPSQ Trigger: CTGAGAGGGCTTGGAGAGGACAAACTGTGGGTACAAAAGTCTTATTGTCCTGGCCCGGATTGCTAAGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS GCA 72 bp | CAATCTCAGCAATTTGGGAGACCGAACTATTGGGATTaGTTGAGGCCAGGAGTTCAAGATCAGCTTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QSQQFGRPNYWD*LRPGVQDQLGQ Trigger: TTGCCCAAGCTGATCTTGAACTCCTGGCCTCAAGCAATCCCAATAGTTCGGTCTCCCAAATTGCTGAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | GCCCTTTCTAAGCTTGTAGACACTTTAAAGCAGTGCTaGAAACTGTGCCTGGCACTTAATGGGGACACAGTA | + |
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Preference number: 6 (lower is better) Translates to: ALSKLVDTLKQC*KLCLALNGDTV Trigger: TACTGTGTCCCCATTAAGTGCCAGGCACAGTTTTCAGCACTGCTTTAAAGTGTCTACAAGCTTAGAAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000421207.2 ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | GTCACTCGTCCCCACACTCGTGGCCCATGGAAGCTGTaGGTAAATGTGTGGTATTTTAAACTGCTAAATGTA | + |
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Preference number: 6 (lower is better) Translates to: VTRPHTRGPWKL*VNVWYFKLLNV Trigger: TACATTTAGCAGTTTAAAATACCACACATTTACTCACAGCTTCCATGGGCCACGAGTGTGGGGACGAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 90 bp | AGGAACTACTTCTCCCACTTTCTAGATAGGAAAAGGTCACCCAGCTaGTATAGGAGGAAGTGGAAGTTGAACTTAGATGTCCCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RNYFSHFLDRKRSPS*YRRKWKLNLDVPAH Trigger: ATGAGCTGGGACATCTAAGTTCAACTTCCACTTCCTCCTATACAAGCTGGGTGACCTTTTCCTATCTAGAAAGTGGGAGAAGTAGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | TTCACAGAGATGAACCTAAAAGCTAAATGCCACGAGTaGCTGGCTGGATGTTACAATGTCTGGGGAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: FTEMNLKAKCHE*LAGCYNVWGML Trigger: AAGCATTCCCCAGACATTGTAACATCCAGCCAGTCACTCGTGGCATTTAGCTTTTAGGTTCATCTCTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421207.2 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 72 bp | TTCTCCCACTTTCTAGATAGGAAAAGGTCACCCAGCTaGTATAGGAGGAAGTGGAAGTTGAACTTAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: FSHFLDRKRSPS*YRRKWKLNLDV Trigger: GACATCTAAGTTCAACTTCCACTTCCTCCTATACAAGCTGGGTGACCTTTTCCTATCTAGAAAGTGGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | GGCATCTCTTGGCTATGTGATCACGCATTTACCTCATaGGATAGCAGCATATTATTAACCACCATCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: GISWLCDHAFTS*DSSILLTTISL Trigger: TAAGGAGATGGTGGTTAATAATATGCTGCTATCTCATGAGGTAAATGCGTGATCACATAGCCAAGAGATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS TCA 72 bp | GAGAGACTTGGACTGTCTCTCAAGAAGGTCTTACAGTaGTCATTAGAACAAAAAGGCATCTCTTGGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: ERLGLSLKKVLQ*SLEQKGISWLC Trigger: ACATAGCCAAGAGATGCCTTTTTGTTCTAATGATCACTGTAAGACCTTCTTGAGAGACAGTCCAAGTCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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| CDS CAA 72 bp | CATAGAAAATGCAATTTTCCATTGTGCTGGAGAGACTaGGACTGTCTCTCAAGAAGGTCTTACAGTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: HRKCNFPLCWRD*DCLSRRSYSDH Trigger: ATGATCACTGTAAGACCTTCTTGAGAGACAGTCCAAGTCTCTCCAGCACAATGGAAAATTGCATTTTCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000435574.2 ENST00000653099.1 ENST00000653353.1 ENST00000663964.1 ENST00000665108.1 |
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